Miyakogusa Predicted Gene

Lj6g3v0819020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0819020.1 Non Characterized Hit- tr|D8SN68|D8SN68_SELML
Putative uncharacterized protein OS=Selaginella
moelle,64.71,0.00000000007,DUF605,NULL; seg,NULL; LYST-INTERACTING
PROTEIN LIP5 (DOPAMINE RESPONSIVE PROTEIN DRG-1),NULL; no
de,CUFF.58368.1
         (460 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093880.1 | hydroxyproline-rich glycoprotein family protei...   365   e-101
Medtr1g116370.1 | glucan synthase-like protein | HC | chr1:52595...    56   9e-08
Medtr3g096200.1 | glucan synthase-like protein | HC | chr3:43969...    56   9e-08
Medtr7g005950.1 | glucan synthase-like protein | HC | chr7:42701...    55   2e-07
Medtr7g005950.2 | glucan synthase-like protein | HC | chr7:42701...    55   2e-07
Medtr8g093630.1 | glucan synthase-like protein | HC | chr8:39170...    50   4e-06

>Medtr5g093880.1 | hydroxyproline-rich glycoprotein family protein |
           HC | chr5:40989438-40992899 | 20130731
          Length = 487

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/234 (74%), Positives = 198/234 (84%)

Query: 3   SETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGMKIPNSERTKTTNALLVSLMNQ 62
           +E EPAK LLPYLQRADELQKHEPLV+YYCRLYAMERG++IP S+RTKTTNALLVSLM Q
Sbjct: 2   AENEPAKPLLPYLQRADELQKHEPLVSYYCRLYAMERGLRIPQSDRTKTTNALLVSLMKQ 61

Query: 63  LEKDRKTTKLGPEDNLYVEGFALNVFGKADKQDHAGRADLNTAKTFYAASIFFEILNQFG 122
           LEKD+K  KLGPEDNLY+EGFALNVFGKADKQD AGRAD+NTAKTFYAASIFFEILNQFG
Sbjct: 62  LEKDKKGLKLGPEDNLYLEGFALNVFGKADKQDRAGRADVNTAKTFYAASIFFEILNQFG 121

Query: 123 TLEPDLEQKQKYAAWKAVDIRKALKEGRKPTPGPPAGDNDMSIPSNAPSNTYDLXXXXXX 182
            L+PDLEQKQKYA WKA DIRKALKEGRKP  GPPAGD D+S+ S++PSN YD+      
Sbjct: 122 ELQPDLEQKQKYAVWKAADIRKALKEGRKPVAGPPAGDEDLSVLSSSPSNIYDIGTTETS 181

Query: 183 XXXXXXESDPSHDYHDPVNYQHSRNVHPAADFHDTIDNQPSANNPPSMQFHDRV 236
                 ESD +H YH+PVNYQ+  ++ PA  F+DT+++Q SAN PPS+QFHDRV
Sbjct: 182 ASGAGSESDSTHGYHNPVNYQNLPSIPPAPKFNDTLNDQNSANIPPSLQFHDRV 235



 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 107/168 (63%), Gaps = 2/168 (1%)

Query: 293 SQDYNSPPPARSEGPYSPGYDHQHYSSD-PQHLAPNYPSHETPS-YPLPHFQSYPSFSES 350
           SQDY+ PPPARS+  YS  Y+HQ YS D  Q+L PNYPSHETP  Y LPHFQSYPSF+ES
Sbjct: 320 SQDYHQPPPARSDSSYSEPYNHQQYSPDQSQNLGPNYPSHETPPPYSLPHFQSYPSFTES 379

Query: 351 TLPSVPSNYIYQGSDAASYSSQSAPXXXXXXXXXXXXXXXXXGTISEPKSTTQTYQYDSN 410
           +LPSVP N+ Y     ASYSSQSAP                 GT+ EPK TT TYQYDS+
Sbjct: 380 SLPSVPVNHTYYQGPDASYSSQSAPLTTNHSLNTQNSSSSRNGTVPEPKPTTPTYQYDSS 439

Query: 411 YDPPPLKLXXXXXXXXXXXXXXXFDDVPTGVDFLRKSLELLTNPSSGE 458
           Y PPP ++               FDDV   VD+L+KSLELLTNPS G+
Sbjct: 440 YQPPPERIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSVGQ 487


>Medtr1g116370.1 | glucan synthase-like protein | HC |
           chr1:52595938-52619979 | 20130731
          Length = 1941

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 3   SETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGMKIPNSERTKTTNALLVSLM 60
           SE  P+ L  + P L+ A+E++K  P VAY CR YA E+  ++  +   +       +L+
Sbjct: 38  SEVVPSSLVEIAPILRVANEVEKTHPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 97

Query: 61  NQLEKDRKTT---KLGPEDNLYVEGFALNVFGK-----ADKQDHAGRADLNTAKTFYAAS 112
            +LE++   T   ++   D   ++ F  + + K      +  D A RA L   K +  A+
Sbjct: 98  QRLERENDPTLKGRIKKSDAREMQSFYQHYYKKYIQALQNAADKADRAQL--TKAYQTAN 155

Query: 113 IFFEIL---NQFGTLEPD---LEQKQKYA 135
           + FE+L   N   ++E D   LE + K A
Sbjct: 156 VLFEVLKAVNMTQSMEVDREILETQDKVA 184


>Medtr3g096200.1 | glucan synthase-like protein | HC |
           chr3:43969447-43952945 | 20130731
          Length = 1931

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 13  PYLQRADELQKHEPLVAYYCRLYAMERGMKIPNSERTKTTNALLVSLMNQLEKDRKTTKL 72
           P L+ A+E++   P VAY CR YA E+  ++  S   +        L+ +LE+D  T+  
Sbjct: 44  PILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLA 103

Query: 73  -------GPEDNLYVEGFALNVFGKADKQDHAGRADLNTAKTFYAASIFFEIL 118
                    E  +Y + +  N     D+ + A RA L   K +  A + FE+L
Sbjct: 104 ARTKKTDAREIQVYYQQYYENYVKALDQGEQADRAQL--GKAYQTAGVLFEVL 154


>Medtr7g005950.1 | glucan synthase-like protein | HC |
           chr7:427010-406267 | 20130731
          Length = 1958

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 3   SETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGMKIPNSERTKTTNALLVSLM 60
           SE  P+ L  + P L+ A+E++K  P VAY CR YA E+  ++  +   +       +L+
Sbjct: 35  SEVVPSSLVEIAPILRVANEVEKTHPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94

Query: 61  NQLEKDRKTT---KLGPEDNLYVEGFALNVFGK-----ADKQDHAGRADLNTAKTFYAAS 112
            +LE++   T   ++   D   ++ F  + + K      +  D A RA L   K +  A+
Sbjct: 95  QRLERENDPTLKGRVKKSDAREMQSFYQHYYKKYIQALQNAADKADRAQL--TKAYQTAN 152

Query: 113 IFFEIL---NQFGTLEPD---LEQKQKYA 135
           + FE+L   N   ++E D   LE + K A
Sbjct: 153 VLFEVLKAVNMTQSMEVDREILETQDKVA 181


>Medtr7g005950.2 | glucan synthase-like protein | HC |
           chr7:427018-407166 | 20130731
          Length = 1887

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 3   SETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGMKIPNSERTKTTNALLVSLM 60
           SE  P+ L  + P L+ A+E++K  P VAY CR YA E+  ++  +   +       +L+
Sbjct: 35  SEVVPSSLVEIAPILRVANEVEKTHPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94

Query: 61  NQLEKDRKTT---KLGPEDNLYVEGFALNVFGK-----ADKQDHAGRADLNTAKTFYAAS 112
            +LE++   T   ++   D   ++ F  + + K      +  D A RA L   K +  A+
Sbjct: 95  QRLERENDPTLKGRVKKSDAREMQSFYQHYYKKYIQALQNAADKADRAQL--TKAYQTAN 152

Query: 113 IFFEIL---NQFGTLEPD---LEQKQKYA 135
           + FE+L   N   ++E D   LE + K A
Sbjct: 153 VLFEVLKAVNMTQSMEVDREILETQDKVA 181


>Medtr8g093630.1 | glucan synthase-like protein | HC |
           chr8:39170342-39154847 | 20130731
          Length = 1939

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 11/125 (8%)

Query: 3   SETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGMKIPNSERTKTTNALLVSLM 60
           +E  PA L  + P L+ A+E++   P VAY CR YA E+  ++  S   +        L+
Sbjct: 35  NEVVPASLASISPILRVANEIETERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLL 94

Query: 61  NQLEKDRKTT------KLGPEDNLYVEGFALNVFGKA-DKQDHAGRADLNTAKTFYAASI 113
            +LE+D  T+      K    +           + +A D+ D A R  L  +K +  A +
Sbjct: 95  QRLERDNATSLASRVKKTDAREIQAYYQQYYEQYVRALDQADQADRTQL--SKAYQTAGV 152

Query: 114 FFEIL 118
            FE+L
Sbjct: 153 LFEVL 157