Miyakogusa Predicted Gene

Lj6g3v0818990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0818990.1 Non Characterized Hit- tr|E9C6K9|E9C6K9_CAPO3
Putative uncharacterized protein OS=Capsaspora
owczarz,31.46,2e-18,T_SNARE,Target SNARE coiled-coil domain; Helical
region found in SNAREs,Target SNARE coiled-coil dom,CUFF.58364.1
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g055200.1 | syntaxin of plants protein | HC | chr3:2169266...   401   e-112
Medtr8g031190.1 | syntaxin of plants protein | HC | chr8:1166847...   401   e-112
Medtr8g031190.2 | syntaxin of plants protein | HC | chr8:1166758...   401   e-112
Medtr5g094010.3 | syntaxin of plants protein | HC | chr5:4106888...   219   2e-57
Medtr5g094010.4 | syntaxin of plants protein | HC | chr5:4106888...   219   2e-57
Medtr5g094010.2 | syntaxin of plants protein | HC | chr5:4106888...   219   2e-57
Medtr5g094010.1 | syntaxin of plants protein | HC | chr5:4106888...   219   2e-57

>Medtr3g055200.1 | syntaxin of plants protein | HC |
           chr3:21692668-21694888 | 20130731
          Length = 261

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/208 (92%), Positives = 205/208 (98%)

Query: 1   MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
           MASSSD+W+KEYNEAMKLADDI+ MISE +SFP+SGPETQRHASAIRRKITILGTRLDSL
Sbjct: 33  MASSSDSWLKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSL 92

Query: 61  QSLLSKLPVKSEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT 120
           QSLLSKLPVKSEKEMNRRKD LANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT
Sbjct: 93  QSLLSKLPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT 152

Query: 121 VGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEHVDV 180
           VGLDN+GLVGLQRQ+MKEQD+GLEKLEETV+STKHIALAVNEELTLHTRLIDDLDEHVDV
Sbjct: 153 VGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDV 212

Query: 181 TDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
           TDSRLRRVQK+LA+LNKRTKGGCSC+CM
Sbjct: 213 TDSRLRRVQKNLAILNKRTKGGCSCMCM 240


>Medtr8g031190.1 | syntaxin of plants protein | HC |
           chr8:11668474-11663639 | 20130731
          Length = 229

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 205/208 (98%)

Query: 1   MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
           MASSSD+W+KEYNEAMKLADDI+ MISE +SFP+SGPETQRHASAIRRKITILGTRLDSL
Sbjct: 1   MASSSDSWVKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSL 60

Query: 61  QSLLSKLPVKSEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT 120
           QSLLSKLPVKSEKEMNRRKD LANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT
Sbjct: 61  QSLLSKLPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT 120

Query: 121 VGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEHVDV 180
           VGLDN+GLVGLQRQ+MKEQD+GLEKLEETV+STKHIALAVNEELTLHTRLIDDLDEHVD+
Sbjct: 121 VGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDI 180

Query: 181 TDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
           TDSRLRRVQK+LA+LNKRTKGGCSC+CM
Sbjct: 181 TDSRLRRVQKNLAILNKRTKGGCSCMCM 208


>Medtr8g031190.2 | syntaxin of plants protein | HC |
           chr8:11667585-11663639 | 20130731
          Length = 229

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 205/208 (98%)

Query: 1   MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
           MASSSD+W+KEYNEAMKLADDI+ MISE +SFP+SGPETQRHASAIRRKITILGTRLDSL
Sbjct: 1   MASSSDSWVKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSL 60

Query: 61  QSLLSKLPVKSEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT 120
           QSLLSKLPVKSEKEMNRRKD LANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT
Sbjct: 61  QSLLSKLPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRT 120

Query: 121 VGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEHVDV 180
           VGLDN+GLVGLQRQ+MKEQD+GLEKLEETV+STKHIALAVNEELTLHTRLIDDLDEHVD+
Sbjct: 121 VGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDI 180

Query: 181 TDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
           TDSRLRRVQK+LA+LNKRTKGGCSC+CM
Sbjct: 181 TDSRLRRVQKNLAILNKRTKGGCSCMCM 208


>Medtr5g094010.3 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/138 (78%), Positives = 121/138 (87%), Gaps = 3/138 (2%)

Query: 3   SSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQS 62
           +SSD W+KEYNEA KLA+DI+SM+SE SS PASGPE QR +S+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPVK---SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSR 119
           LLSKLP K   SEKE NRR D LANLRSKVNQMASTLNMSNFAN+D L+GPE+KPD MSR
Sbjct: 62  LLSKLPGKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMSR 121

Query: 120 TVGLDNSGLVGLQRQIMK 137
           TVGLDN+GLVG QRQIMK
Sbjct: 122 TVGLDNNGLVGFQRQIMK 139


>Medtr5g094010.4 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/138 (78%), Positives = 121/138 (87%), Gaps = 3/138 (2%)

Query: 3   SSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQS 62
           +SSD W+KEYNEA KLA+DI+SM+SE SS PASGPE QR +S+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPVK---SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSR 119
           LLSKLP K   SEKE NRR D LANLRSKVNQMASTLNMSNFAN+D L+GPE+KPD MSR
Sbjct: 62  LLSKLPGKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMSR 121

Query: 120 TVGLDNSGLVGLQRQIMK 137
           TVGLDN+GLVG QRQIMK
Sbjct: 122 TVGLDNNGLVGFQRQIMK 139


>Medtr5g094010.2 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/138 (78%), Positives = 121/138 (87%), Gaps = 3/138 (2%)

Query: 3   SSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQS 62
           +SSD W+KEYNEA KLA+DI+SM+SE SS PASGPE QR +S+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPVK---SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSR 119
           LLSKLP K   SEKE NRR D LANLRSKVNQMASTLNMSNFAN+D L+GPE+KPD MSR
Sbjct: 62  LLSKLPGKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMSR 121

Query: 120 TVGLDNSGLVGLQRQIMK 137
           TVGLDN+GLVG QRQIMK
Sbjct: 122 TVGLDNNGLVGFQRQIMK 139


>Medtr5g094010.1 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/138 (78%), Positives = 121/138 (87%), Gaps = 3/138 (2%)

Query: 3   SSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQS 62
           +SSD W+KEYNEA KLA+DI+SM+SE SS PASGPE QR +S+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPVK---SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSR 119
           LLSKLP K   SEKE NRR D LANLRSKVNQMASTLNMSNFAN+D L+GPE+KPD MSR
Sbjct: 62  LLSKLPGKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMSR 121

Query: 120 TVGLDNSGLVGLQRQIMK 137
           TVGLDN+GLVG QRQIMK
Sbjct: 122 TVGLDNNGLVGFQRQIMK 139