Miyakogusa Predicted Gene

Lj6g3v0815690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0815690.1 Non Characterized Hit- tr|B9T219|B9T219_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,57.47,4e-18,seg,NULL,CUFF.58335.1
         (636 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g055370.1 | enhanced downy mildew protein | HC | chr3:2176...   729   0.0  
Medtr8g009000.1 | enhanced downy mildew protein | HC | chr8:1979...   415   e-116
Medtr8g009000.2 | enhanced downy mildew protein | HC | chr8:1980...   415   e-116
Medtr5g094150.1 | cytosine specific DNA methyltransferase replic...    67   6e-11

>Medtr3g055370.1 | enhanced downy mildew protein | HC |
            chr3:21767843-21780507 | 20130731
          Length = 1245

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/721 (57%), Positives = 481/721 (66%), Gaps = 97/721 (13%)

Query: 1    MGDELYSIWEKGFKKTNSGSQVDNVAKKTLSVKPTKKLSSALPPLDADSERRLLTLFEEA 60
            +G +LYS ++KG K+ NSG+ V+NVA  TLSVK  KKLSSA P LDADSERRLL L +EA
Sbjct: 535  LGLQLYSHYQKGSKQINSGNHVNNVADNTLSVKRPKKLSSAPPQLDADSERRLLALVKEA 594

Query: 61   TSSITLENVIKTHKFASTHTHSLKSVVEKTITVGKLEGSVDAVRTALRMLEAGQNIRDAE 120
            +SSITLE+VIK HKF STHTHSLK+VVEKTIT+GKLEGSV+AVRTALRML+ G +IRDAE
Sbjct: 595  SSSITLESVIKEHKFVSTHTHSLKNVVEKTITMGKLEGSVEAVRTALRMLDEGHSIRDAE 654

Query: 121  AVCGPDVLHQIFKWKDKLKVYMAPVLNGNRYTSYGRHFTQVEKLEGIVDKLQWYVQNGDT 180
            AVCGPDV++++FKWKDKLKVY+APVL GNRYTS+GRHFTQVEKLEGIVDKL WYVQN D 
Sbjct: 655  AVCGPDVMNRLFKWKDKLKVYLAPVLYGNRYTSFGRHFTQVEKLEGIVDKLHWYVQNNDM 714

Query: 181  IVDFCCGANDFSTLMKKKLEETGKKCSYKNYDLLPTKNDFNFEMRDWMSVQRKELPEGSQ 240
            IVDFCCGANDFS LMKKKLEETGK C YKN+DLLPTKNDFNFEMRDW++VQRKELP GSQ
Sbjct: 715  IVDFCCGANDFSRLMKKKLEETGKSCLYKNFDLLPTKNDFNFEMRDWLTVQRKELPLGSQ 774

Query: 241  LIMGLNPPFGLKAALANKFINKALEFEPKLMILIVPPETERLDRKRSPYDLVWEDKKFLS 300
            LIMGLNPPFGLKAALANKFI+KALEFEPKL+ILIVPPETERLDRKRS Y LVWED++FLS
Sbjct: 775  LIMGLNPPFGLKAALANKFIDKALEFEPKLLILIVPPETERLDRKRSRYVLVWEDERFLS 834

Query: 301  GKSFYLPGSIDANDKQMEQWNITTPPLYLWSRPDWTVKHKGIAKEHGHLFSQHEVSNMES 360
            GKSFYLPGS+D+NDKQMEQWN+  PPLYLWS PDW  KHK IA+EHGHLF + +VS MES
Sbjct: 835  GKSFYLPGSVDSNDKQMEQWNVKPPPLYLWSHPDWADKHKLIAQEHGHLFRERDVSRMES 894

Query: 361  PDNEEAPASHTMDDKDGNDV----MLGHDSLRLTDDEDHTSSMNGGQKGSSALGSTDRQS 416
             D E++ ASH+MDD   +D     ML HD L+ T D+D  SS   GQ   S+ G+  R S
Sbjct: 895  FDKEKSSASHSMDDNYFDDTMLDRMLDHDFLKSTSDQD--SSFMIGQMEGSSHGNVFRVS 952

Query: 417  QWVS---KADSDKSSWKRKRTEENDGR--AVTSPAKRQAINQMHEEE--LDHSISHPIDR 469
            Q        +++ +SWKRKRTEENDGR  AVT PA RQ IN +   +   D  +S   D 
Sbjct: 953  QERQDYLTINAENTSWKRKRTEENDGRGPAVTLPAIRQDINGISTPQSGSDMELS---DN 1009

Query: 470  GPSVEGFQPKSYLLPPYSEAGDSGYGHLEPSS-----FGVAYVGTQKYLRESEMRQQSGL 524
                 G  P    L P S   D  Y HLEP S     FG AY GT  +   ++     GL
Sbjct: 1010 EVGNNGHMP----LEPQSSIVDDSYRHLEPLSSSRVEFGQAYDGTHNWPNVADPLPDYGL 1065

Query: 525  YGLQNPDS---------------MRND----------YLS-------GHDPAYNLGSSYL 552
              LQ  +S               +R D          YL+       G    Y +G+ Y+
Sbjct: 1066 ADLQEHNSGHLGDGTSSLGYRPHLRGDDIYPPGLPRPYLTEDVIQPLGVPRPYVMGADYI 1125

Query: 553  PP-------------------------------GSVSEPPYM-------MTAPAMQRYAP 574
             P                               GS SE PYM       M+ PAMQRYAP
Sbjct: 1126 RPPRVPMPDPMSSSYLSGRGPAYSQMGSTYSVCGSGSELPYMMNTPAMQMSTPAMQRYAP 1185

Query: 575  RLDELNHVSRVDPLRPEPPIIGRIGASEHTXXXXXXXXXXXXFATGSHQFYSRRNSSGRF 634
            RLDELNHV + + L PE PI+ R   SEH+            F  GS   YSR+NSS  F
Sbjct: 1186 RLDELNHV-KTNSLGPEHPIVDRSTTSEHS-AQSGSENVPPGFPGGSPHLYSRQNSSNWF 1243

Query: 635  N 635
            +
Sbjct: 1244 S 1244


>Medtr8g009000.1 | enhanced downy mildew protein | HC |
           chr8:1979212-1970413 | 20130731
          Length = 1035

 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 184/310 (59%), Positives = 244/310 (78%)

Query: 40  SALPPLDADSERRLLTLFEEATSSITLENVIKTHKFASTHTHSLKSVVEKTITVGKLEGS 99
           ++L    AD E+R+L L EEATS++ +E   K +   +T +   ++V  KT+T+GK+EGS
Sbjct: 665 TSLEDRKADMEKRILALMEEATSTLNMEKFKKDNHAVNTSSSLTETVFRKTLTLGKVEGS 724

Query: 100 VDAVRTALRMLEAGQNIRDAEAVCGPDVLHQIFKWKDKLKVYMAPVLNGNRYTSYGRHFT 159
           V AV+ AL+ L+ G  I +A+A+C P+++ Q+F W+ +LK+Y+AP L+G RYTS+GRHFT
Sbjct: 725 VKAVQIALQKLDEGCGIEEAKAICEPEIIRQLFTWQKQLKIYLAPFLHGRRYTSFGRHFT 784

Query: 160 QVEKLEGIVDKLQWYVQNGDTIVDFCCGANDFSTLMKKKLEETGKKCSYKNYDLLPTKND 219
           +++KL+ IVD+L WYVQ+GDT++DFCCGANDFS LMK KLE+TGK CS+KNYDL   KND
Sbjct: 785 KIDKLKEIVDRLHWYVQSGDTVLDFCCGANDFSCLMKSKLEQTGKLCSFKNYDLFQAKND 844

Query: 220 FNFEMRDWMSVQRKELPEGSQLIMGLNPPFGLKAALANKFINKALEFEPKLMILIVPPET 279
           FNFE RDWMSVQ +ELP GS LI+GLNPPFG++ +LANKFI+KAL F+PKL+ILIVP  T
Sbjct: 845 FNFEKRDWMSVQAEELPHGSNLIIGLNPPFGVRGSLANKFIDKALTFKPKLLILIVPKVT 904

Query: 280 ERLDRKRSPYDLVWEDKKFLSGKSFYLPGSIDANDKQMEQWNITTPPLYLWSRPDWTVKH 339
            RLDRK++ Y+L+W D++  SGKSFYLPGS+D  DKQ+E WN+  PPLYLWSRPDWT  H
Sbjct: 905 RRLDRKKAGYNLIWADEEICSGKSFYLPGSVDTRDKQLEDWNLKPPPLYLWSRPDWTAWH 964

Query: 340 KGIAKEHGHL 349
             IA+ H H+
Sbjct: 965 MQIARMHRHI 974


>Medtr8g009000.2 | enhanced downy mildew protein | HC |
           chr8:1980078-1970212 | 20130731
          Length = 1035

 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 184/310 (59%), Positives = 244/310 (78%)

Query: 40  SALPPLDADSERRLLTLFEEATSSITLENVIKTHKFASTHTHSLKSVVEKTITVGKLEGS 99
           ++L    AD E+R+L L EEATS++ +E   K +   +T +   ++V  KT+T+GK+EGS
Sbjct: 665 TSLEDRKADMEKRILALMEEATSTLNMEKFKKDNHAVNTSSSLTETVFRKTLTLGKVEGS 724

Query: 100 VDAVRTALRMLEAGQNIRDAEAVCGPDVLHQIFKWKDKLKVYMAPVLNGNRYTSYGRHFT 159
           V AV+ AL+ L+ G  I +A+A+C P+++ Q+F W+ +LK+Y+AP L+G RYTS+GRHFT
Sbjct: 725 VKAVQIALQKLDEGCGIEEAKAICEPEIIRQLFTWQKQLKIYLAPFLHGRRYTSFGRHFT 784

Query: 160 QVEKLEGIVDKLQWYVQNGDTIVDFCCGANDFSTLMKKKLEETGKKCSYKNYDLLPTKND 219
           +++KL+ IVD+L WYVQ+GDT++DFCCGANDFS LMK KLE+TGK CS+KNYDL   KND
Sbjct: 785 KIDKLKEIVDRLHWYVQSGDTVLDFCCGANDFSCLMKSKLEQTGKLCSFKNYDLFQAKND 844

Query: 220 FNFEMRDWMSVQRKELPEGSQLIMGLNPPFGLKAALANKFINKALEFEPKLMILIVPPET 279
           FNFE RDWMSVQ +ELP GS LI+GLNPPFG++ +LANKFI+KAL F+PKL+ILIVP  T
Sbjct: 845 FNFEKRDWMSVQAEELPHGSNLIIGLNPPFGVRGSLANKFIDKALTFKPKLLILIVPKVT 904

Query: 280 ERLDRKRSPYDLVWEDKKFLSGKSFYLPGSIDANDKQMEQWNITTPPLYLWSRPDWTVKH 339
            RLDRK++ Y+L+W D++  SGKSFYLPGS+D  DKQ+E WN+  PPLYLWSRPDWT  H
Sbjct: 905 RRLDRKKAGYNLIWADEEICSGKSFYLPGSVDTRDKQLEDWNLKPPPLYLWSRPDWTAWH 964

Query: 340 KGIAKEHGHL 349
             IA+ H H+
Sbjct: 965 MQIARMHRHI 974


>Medtr5g094150.1 | cytosine specific DNA methyltransferase replication
            foci domain protein | LC | chr5:41126697-41118549 |
            20130731
          Length = 1169

 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 12/127 (9%)

Query: 2    GDELYSIWEKGFKKTNSGSQVDNVAKKTLSVKPTKKLSSALPPLDADSERRLLTLFEEAT 61
            G +L +   KG ++    +QVD+   +TLS+ P   L S LPP DADSE+ L+  F+EA 
Sbjct: 914  GQKLCASMNKGSEQIKYDNQVDDADNQTLSIMP---LRSLLPPPDADSEKGLVDSFKEAR 970

Query: 62   SSITLENVIKTHKFASTHTHSLKSVVEKTITVGKLEGSVDAVRTALRMLEAGQNIRDAEA 121
            SSI LE VIK HK        L  V +K IT+ KL+ SVD + T  ++L       D++ 
Sbjct: 971  SSILLEGVIKKHK--------LGDVGDKAITMRKLDDSVD-LTTKQKVLPKEHGHMDSDK 1021

Query: 122  VCGPDVL 128
            +   +++
Sbjct: 1022 LAAKNIM 1028