Miyakogusa Predicted Gene
- Lj6g3v0802240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0802240.1 Non Characterized Hit- tr|I1LE46|I1LE46_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,24.89,2e-18,Frigida,Frigida-like; seg,NULL; coiled-coil,NULL;
FAMILY NOT NAMED,NULL,CUFF.58290.1
(499 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g056070.1 | frigida-LIKE protein | HC | chr3:22278030-2228... 353 3e-97
Medtr5g094400.1 | frigida-LIKE protein | HC | chr5:41255364-4125... 293 3e-79
Medtr4g095080.1 | frigida-like protein | HC | chr4:39679199-3968... 103 4e-22
Medtr8g010170.1 | ABI3-interacting protein | HC | chr8:2595983-2... 78 3e-14
Medtr1g103710.1 | frigida-LIKE protein | HC | chr1:46944448-4694... 68 2e-11
Medtr8g010160.1 | ABI3-interacting protein | HC | chr8:2588108-2... 62 9e-10
Medtr8g083500.1 | frigida-LIKE protein | HC | chr8:43605849-4361... 57 3e-08
Medtr5g078510.1 | frigida-LIKE protein | LC | chr5:33560312-3356... 55 2e-07
Medtr2g091370.1 | frigida-LIKE protein | LC | chr2:39496078-3949... 53 6e-07
>Medtr3g056070.1 | frigida-LIKE protein | HC |
chr3:22278030-22282431 | 20130731
Length = 525
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 251/437 (57%), Gaps = 25/437 (5%)
Query: 75 ELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLEGLNGVGGXX 134
EL VLCEK+DG+GLRN++ + D+IRV+AEL R APD EMVLQSLEG V G
Sbjct: 100 ELRVLCEKIDGIGLRNYIDKNYKDKIRVEAELLEEFRSAPDAGEMVLQSLEGFYRVSGNF 159
Query: 135 XXXXXXXXXXXXXXXXXQLRXXXXXXXXXXXXXXXXXXXXWRKWLVVDAASALGAIGFLN 194
L W+ L+ D + LGA+GFL
Sbjct: 160 NDRVLRKMGRICVMLLKVLSVAGVNVSGKAREKALKLAIDWKVRLLGDHGNILGALGFLY 219
Query: 195 IVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPDIIQKLINK 254
+V FG+VSEF L+ F+A AA+N +F +L R I TD +VP+I+QKL+ K
Sbjct: 220 LVYGFGIVSEFRGYVLVEFAARAAINGEFMQLCRDIGFTD--------KVPEIVQKLVEK 271
Query: 255 GKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPLLEITAREICSLKLV 314
GK+ LAVK+V EF LAD IPPV IL+A VDES+KLA R S+E K +EIT RE+ LK V
Sbjct: 272 GKHVLAVKFVFEFSLADKIPPVPILKAAVDESRKLARRRSEEGKRRMEITDRELRVLKRV 331
Query: 315 IKIIDSHKLECDYLRASLEKRIEQLKRQKKACM-----------XXXXXXXXXXXXQHDQ 363
I+II+ HKLE +Y R SLE+RIEQLK Q + Q
Sbjct: 332 IEIIEIHKLESEYPRDSLEQRIEQLKGQDPNMKDRTPASILNQHTLQRRQQKRRMKKQQQ 391
Query: 364 QSGIKRPRSSAPVGTEAVRKN-FNNGNTAIHQYQQSLVHPSGLFPEHPNPYMSLPAMPFR 422
Q+G K PR+S VG AV KN NN N+ + QYQQ LV+PSGLFPEHPNPY A
Sbjct: 392 QNGNKVPRTSTSVGPAAVLKNDTNNDNSTMRQYQQPLVNPSGLFPEHPNPYKIPQATSSG 451
Query: 423 MVAPTPTIPFYTCPSAGPYGHAGGSMGHSGNPSLGSSHLKRKKTSSEPHVPSCYHDRTS- 481
MVA PTIP YT PS GPYG AG MG GN LG SHL SSEP VPS ++ +
Sbjct: 452 MVASIPTIPSYTGPSTGPYGFAGIPMGPGGNLILGGSHL----NSSEPRVPSAFYGSNNF 507
Query: 482 SYGGANLQHNYKASYNP 498
+YGG N QH+Y+A Y P
Sbjct: 508 TYGGINRQHHYQAPYYP 524
>Medtr5g094400.1 | frigida-LIKE protein | HC |
chr5:41255364-41258863 | 20130731
Length = 595
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 232/420 (55%), Gaps = 16/420 (3%)
Query: 62 KNYIVPGSVKPSYELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVL 121
+N V GS+ LS LC+K DG GLR+F++ F D++ ++ EL A +CA +PA+MVL
Sbjct: 111 QNGAVSGSITHLEGLSALCKKNDGKGLRDFIRVNFKDKVTIKDELQIAFKCASNPADMVL 170
Query: 122 QSLEGLNGVGGXXXXXXXXXXXXXX-XXXXXQLRXXXXXXXXXXXXXXXXXXXXWRKWLV 180
+L+G+ G QLR W+ LV
Sbjct: 171 DALDGVFGANAVVDGKELPRLNKRSCNFLFQQLRVFSPYVSFDVRKKAKRLFSLWKVNLV 230
Query: 181 VDAASALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCL 240
D + + FL V+ + + E + EL ++SA AA ND+ P+LY+ I L+D
Sbjct: 231 NDVHESCWTMAFLQFVAVYDFLPELNVGELAAYSATAATNDELPDLYQIIALSD------ 284
Query: 241 TGRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPL 300
RV D+IQKLI +GK LAVK++ F L + PPV +L+A V++++KLA RL+ E K L
Sbjct: 285 --RVQDVIQKLIERGKQILAVKFIFHFKLTEKTPPVPVLKAYVNDAEKLAKRLASEGKSL 342
Query: 301 LEITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQKKACMXXXXXXXXXXXXQ 360
EI +REI +LK VIK+I+S+ L+ ++ RAS+E+RIE+L +Q+K Q
Sbjct: 343 NEIKSREIHALKSVIKVIESYNLDSEFPRASIERRIEELSKQRKVGGKPVAPAFAAMPLQ 402
Query: 361 HDQQ--SGIKRPRSSAPVGTEAVRKNFNNGNTAIHQYQQSLVHPSGLFPEHPNPYMSL-P 417
H QQ SGIKRP +SAP G V N + IHQYQQ + L PEHPNPYMS+ P
Sbjct: 403 HPQQQLSGIKRPLTSAPFGPAPVLNNAGGTPSTIHQYQQPHFQSTSLLPEHPNPYMSMPP 462
Query: 418 AMPFRMVAPTPTIPFYTCPSAGPYGHAGGSMGHSGNPSLGSSHLKRKKTSSEPHVPSCYH 477
PF M A TPT+ YT PS GPYG G MG GN + G SHL SS+P V Y+
Sbjct: 463 TTPFGMKAATPTVSSYTGPSTGPYGLDGVPMGPIGNLNQGGSHL----NSSQPQVMPGYY 518
>Medtr4g095080.1 | frigida-like protein | HC |
chr4:39679199-39682625 | 20130731
Length = 545
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 131/300 (43%), Gaps = 30/300 (10%)
Query: 66 VPGSVKPSYELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLE 125
V V+P +L V CEKMD GL ++V A + E+ AL A DPA +VL L
Sbjct: 150 VATEVRPHLDLKVYCEKMDATGLLDYVVAHKKKVSEFREEVSVALESATDPARLVLDLLL 209
Query: 126 GL----------NGVGGXXXXXXXXXXXXXXXXXXXQLRX---XXXXXXXXXXXXXXXXX 172
G + VG R
Sbjct: 210 GFYPDNETSQQNDNVGAALQGKRKSCILILEAMASLLARADPGADHLLNPETKQQAKAIA 269
Query: 173 XXWRKWLV---VDAAS--ALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELY 227
WR L +DAA+ +L A FL ++S + + SEF +EL A N PEL
Sbjct: 270 DEWRLKLASAGIDAANGNSLEAEAFLQLLSTYRIASEFDEEELCKLVPAVAQNRSAPELC 329
Query: 228 RAICLTDGVPNCLTGRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESK 287
R+I LT +VP +I+ LIN GK+ AV +V F L ++ PPV +L + +
Sbjct: 330 RSIGLT--------HKVPALIEALINNGKHIAAVHFVQLFKLQESFPPVPLLRTYLKNQR 381
Query: 288 KLAIRLSQEEKPL----LEITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
+ + + + + ++ A+E+ +L+ VIK I+ ++ E +Y +L KR+ QL++ K
Sbjct: 382 RNSQVKADNVRDIATAKIDANAQELAALRNVIKCIEEYEFESEYPLDTLHKRVHQLEKAK 441
>Medtr8g010170.1 | ABI3-interacting protein | HC |
chr8:2595983-2590280 | 20130731
Length = 545
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 13/170 (7%)
Query: 179 LVVDAAS--ALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGV 236
L +DA++ +L A FL ++++FG+ S+F+ +EL + + +L R + L++
Sbjct: 289 LDMDASNGNSLEAHAFLQLLASFGIASDFNEEELSRLIPMVSRRRQTADLCRCLGLSE-- 346
Query: 237 PNCLTGRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRL-SQ 295
++P +I+ L+ G+ AV FDL D P+ +L++ ++++KK + + S
Sbjct: 347 ------KMPGVIKVLVKNGRQIDAVNLAFAFDLTDQFSPIPLLKSYLNDAKKTSSPVKSG 400
Query: 296 EEKPL--LEITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
P L++ RE+ +LK VIK I+ HKLE Y SL+KR+ QL++ K
Sbjct: 401 NSSPTAQLDVNERELFALKAVIKCIEEHKLEEQYPIDSLQKRMIQLEKAK 450
>Medtr1g103710.1 | frigida-LIKE protein | HC |
chr1:46944448-46941301 | 20130731
Length = 519
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 192 FLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPDIIQKL 251
FL + FG+V +A P+L ++ LTD ++ D+IQ+L
Sbjct: 254 FLQHLVTFGIVDSNDLGLYRKLVIASAWRKHMPKLALSLGLTD--------QMADMIQEL 305
Query: 252 INKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEE----KPLLEITARE 307
I+KG+ AV + E L D PPV +L++ + ++KK+A + ++ + +E
Sbjct: 306 ISKGQQLDAVHFTFEVGLVDKFPPVPLLKSYLKDAKKVAASILEDPNNAGRAGYLAARKE 365
Query: 308 ICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
+LK VIK I+ + LE ++ SL+KR+EQL++ K
Sbjct: 366 QSALKAVIKCIEEYNLEAEFPAESLKKRLEQLEKVK 401
>Medtr8g010160.1 | ABI3-interacting protein | HC |
chr8:2588108-2583935 | 20130731
Length = 547
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 179 LVVDAAS--ALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGV 236
L +DA++ +L A FL ++++F + S F +EL + + +L R + L++
Sbjct: 289 LDMDASNGNSLEAHAFLQLLASFNIASGFDEEELSRLIPMVSRRRQTADLCRCLGLSE-- 346
Query: 237 PNCLTGRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKL---AIRL 293
++P +I+ L N G+ AV FDL PV +L++ + +++ R+
Sbjct: 347 ------KMPGVIEVLANSGRQIDAVNLAFAFDLTKQFSPVSLLKSYLQDARNSCSPVKRV 400
Query: 294 SQEEKPLLEITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
+ +E+ RE+ + K VIK I+ KL+ Y L KR+ QL++ K
Sbjct: 401 NSSPTAQIEVNERELIAHKAVIKCIEERKLDEQYPLDPLMKRVVQLEKAK 450
>Medtr8g083500.1 | frigida-LIKE protein | HC |
chr8:43605849-43610391 | 20130731
Length = 539
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 36/284 (12%)
Query: 76 LSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLE--------GL 127
L L KMD L FV ++ + I ++ E+ AL+ A D +VL ++E G
Sbjct: 119 LKSLSRKMDAESLLMFVISKRKESIMLRPEIAAALKEAVDAPRLVLDAVEEYLTCKTEGK 178
Query: 128 NGVGGXXXXXXXXXXXXXXXXXXXQLRXXXXXXXXXXXXXXXXXXXXWRKWLVVDAASAL 187
+GV L W++ L D
Sbjct: 179 SGVTDKRWACGLLIQG---------LISESSVYSRTIVERAGSLLDLWKEQL--DGEPEK 227
Query: 188 GA---IGFLNIVSAFGLVSEFSTDELISFSALA-AVNDDFPELYRAICLTDGVPNCLTGR 243
GA + FL +V FGL S+ DE + S + A D ++ ++ D +
Sbjct: 228 GAAEMVMFLQMVVCFGLRSKVD-DEYLRKSVMKFASRRDMAKVAASLEFGD--------K 278
Query: 244 VPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVD--ESKKLAIRLSQEEKPLL 301
+ DII +L+ GK AV + E L + P+ +L + V E+ I S +
Sbjct: 279 MIDIIDELVKNGKEMEAVYFASESGLTERFKPIELLNSYVRNYENNVATILKSGNNSQVA 338
Query: 302 --EITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
E E+ S+K VIK ++ HKLE + L++R+ QL + K
Sbjct: 339 TDEANTLELTSIKDVIKCVEDHKLESKFRLDKLKRRVSQLDKNK 382
>Medtr5g078510.1 | frigida-LIKE protein | LC |
chr5:33560312-33563828 | 20130731
Length = 546
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 187 LGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPD 246
L +GFL ++S + L+ F DE++ A A++ EL+ ++ G N RV D
Sbjct: 392 LAVLGFLMLLSIYKLLDSFDEDEVLELFAFVALHKIAVELFESL----GFAN----RVSD 443
Query: 247 IIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPL-LEITA 305
++ LIN+ + AV++ +DL D V +L V +K + ++ + ++ A
Sbjct: 444 FVKHLINRKQIVAAVRFSCAYDLDDEDQLVDMLREHVQNAKLICESFCKKTNSIEIKDKA 503
Query: 306 R--EICSLKLVIKIIDSHKLE-CDYLRASLEKRIEQLKRQK 343
R EI SL V++ I ++LE D L ++ RI LK K
Sbjct: 504 RDQEIASLGTVLQCISENRLESADLLHKEIDHRILVLKSHK 544
>Medtr2g091370.1 | frigida-LIKE protein | LC |
chr2:39496078-39492667 | 20130731
Length = 849
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 182 DAASALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLT 241
+ +++ +GFL ++S +GLV F DE++ L + ++ EL+ A+ D
Sbjct: 681 NTENSVAVLGFLLLLSIYGLVPSFDEDEVLKLFGLVSQHNIVVELFGAMGFAD------- 733
Query: 242 GRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPL- 300
++ ++ LI + +Y AV++ ++ +D V + E V K ++ + +E +
Sbjct: 734 -KISGFVKNLIKQRQYDEAVRFSRVYNFSDNNQLVDLFEEHVQNLKLISESICKETNSIE 792
Query: 301 LEITAR--EICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
++ AR E+ SLK V++ I + LE L ++ RI +L+R K
Sbjct: 793 IKDKARDQEVASLKAVLQCIIDNNLEFKDLLNKIDNRILELQRGK 837