Miyakogusa Predicted Gene

Lj6g3v0775980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0775980.1 Non Characterized Hit- tr|I3S9B7|I3S9B7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,RIBOSOMALS10,Ribosomal protein S10;
Ribosomal_S10,Ribosomal protein S10; RIBOSOMAL_S10,Ribosomal
pro,gene.g64761.t1.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g058430.1 | 30S ribosomal protein S10 | HC | chr3:23188302...   226   1e-59
Medtr0157s0070.1 | 40S ribosomal protein S20-2 | HC | scaffold01...    52   3e-07
Medtr4g034030.1 | 40S ribosomal protein S20-2 | HC | chr4:124937...    52   3e-07
Medtr2g085090.1 | 40S ribosomal protein S20-2 | HC | chr2:333219...    52   3e-07
Medtr1g091057.1 | 40S ribosomal protein S20-2 | HC | chr1:411973...    52   3e-07
Medtr1g091057.2 | 40S ribosomal protein S20-2 | HC | chr1:411971...    52   3e-07
Medtr7g092720.1 | 40S ribosomal protein S20-2 | HC | chr7:367752...    52   3e-07

>Medtr3g058430.1 | 30S ribosomal protein S10 | HC |
           chr3:23188302-23185134 | 20130731
          Length = 188

 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/164 (69%), Positives = 123/164 (75%), Gaps = 13/164 (7%)

Query: 33  GNTLRLTTLKPLHSSTVLKAAPEVXXXXXXXXXXXXXXXFQVGDLXXXXXXXXXXXXDAD 92
           GNTLR+T  KPL  STV+ AAPEV                 +GD             +AD
Sbjct: 38  GNTLRITNAKPLQLSTVVHAAPEVLNSEVDDLETPSTSEISIGD-------------NAD 84

Query: 93  AMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVH 152
            +APK KIRIKLRSY VPLIEDSCKQILDAAR TNAKTMGPVPLPTKKRI+CVLKSPHVH
Sbjct: 85  MLAPKHKIRIKLRSYLVPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIHCVLKSPHVH 144

Query: 153 KDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           KDARFHFE+RTHQR+IDIL+PTAQTIDSLM L LPAGVDVEVKL
Sbjct: 145 KDARFHFEVRTHQRVIDILFPTAQTIDSLMLLQLPAGVDVEVKL 188


>Medtr0157s0070.1 | 40S ribosomal protein S20-2 | HC |
           scaffold0157:26505-24091 | 20130731
          Length = 122

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++ + +  GPV +PTK       K+P       +
Sbjct: 21  HKIRITLSSKHVQNLEKVCSDLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTW 80

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID LY +   +  +  + +  GV+VEV +
Sbjct: 81  DRFELRVHKRVID-LYSSPDVVKQITSITIEPGVEVEVTI 119


>Medtr4g034030.1 | 40S ribosomal protein S20-2 | HC |
           chr4:12493797-12496819 | 20130731
          Length = 122

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++ + +  GPV +PTK       K+P       +
Sbjct: 21  HKIRITLSSKHVQNLEKVCSDLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTW 80

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID LY +   +  +  + +  GV+VEV +
Sbjct: 81  DRFELRVHKRVID-LYSSPDVVKQITSITIEPGVEVEVTI 119


>Medtr2g085090.1 | 40S ribosomal protein S20-2 | HC |
           chr2:33321986-33318889 | 20130731
          Length = 123

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++ + +  GPV +PTK       K+P       +
Sbjct: 22  HKIRITLSSKHVQNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTW 81

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID LY +   +  +  + +  GV+VEV +
Sbjct: 82  DRFELRVHKRVID-LYSSPDVVKQITSITIEPGVEVEVTI 120


>Medtr1g091057.1 | 40S ribosomal protein S20-2 | HC |
           chr1:41197356-41194342 | 20130731
          Length = 123

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++ + +  GPV +PTK       K+P       +
Sbjct: 22  HKIRITLSSKHVQNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTW 81

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID LY +   +  +  + +  GV+VEV +
Sbjct: 82  DRFELRVHKRVID-LYSSPDVVKQITSITIEPGVEVEVTI 120


>Medtr1g091057.2 | 40S ribosomal protein S20-2 | HC |
           chr1:41197168-41194342 | 20130731
          Length = 123

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++ + +  GPV +PTK       K+P       +
Sbjct: 22  HKIRITLSSKHVQNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTW 81

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID LY +   +  +  + +  GV+VEV +
Sbjct: 82  DRFELRVHKRVID-LYSSPDVVKQITSITIEPGVEVEVTI 120


>Medtr7g092720.1 | 40S ribosomal protein S20-2 | HC |
           chr7:36775239-36777208 | 20130731
          Length = 122

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++ + +  GPV +PTK       K+P       +
Sbjct: 21  HKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTW 80

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID LY +   +  +  + +  GV+VEV +
Sbjct: 81  DRFELRVHKRVID-LYSSPDVVKQITSITIEPGVEVEVTI 119