Miyakogusa Predicted Gene
- Lj6g3v0774920.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0774920.2 Non Characterized Hit- tr|B9SAJ5|B9SAJ5_RICCO
Putative uncharacterized protein OS=Ricinus communis G,52.78,3e-17,Ran
BP2/NZF zinc finger-like,NULL; ZF_RANBP2_2,Zinc finger, RanBP2-type;
WLM,WLM; ZF_RANBP2_1,Zinc f,CUFF.58231.2
(413 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g058580.1 | zinc ion-binding protein | HC | chr3:23291007-... 561 e-160
Medtr3g058580.2 | zinc ion-binding protein | HC | chr3:23289865-... 432 e-121
Medtr2g105670.1 | zinc ion-binding protein | LC | chr2:45557393-... 137 2e-32
Medtr3g082840.3 | zinc metalloproteinase-like protein, putative ... 67 4e-11
Medtr3g082840.2 | zinc metalloproteinase-like protein, putative ... 67 4e-11
Medtr3g082840.1 | zinc metalloproteinase-like protein, putative ... 66 5e-11
>Medtr3g058580.1 | zinc ion-binding protein | HC |
chr3:23291007-23288255 | 20130731
Length = 405
Score = 561 bits (1447), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/412 (67%), Positives = 314/412 (76%), Gaps = 8/412 (1%)
Query: 1 MNSGDLNKVWEINALKRKPRPEEATKMLEKIAKQVQPIMRKHNWRVKLLSEFCPSNPXXX 60
MNSGDL+KVWEI ALKR P E+A KMLEKIAKQVQPIM KH WRVKLLSE P+NP
Sbjct: 1 MNSGDLHKVWEIRALKRMPETEKAHKMLEKIAKQVQPIMHKHKWRVKLLSEMNPTNPALL 60
Query: 61 XXXXXXXXXXKLRLRRPNRDSEFYPFDEVLDTMLHELCHNAHSSHNAAFYKLWDQLRKEC 120
KLRLRRPNR+S+FYPFD+VLDTMLHELCHNAH HNA+FYKLWD+LRKEC
Sbjct: 61 GLNVGAGIHVKLRLRRPNRESDFYPFDQVLDTMLHELCHNAHGPHNASFYKLWDELRKEC 120
Query: 121 EELMAKGITGSGDGFDVPGKRLGGNSRQPPLSSLRKTALAAAEKRSRLGSLLPSGPNRLG 180
EELMAKGITGSG+GFD+PGKRLGGNSRQPPL SLRKTALAAAEKRS+LG+LLPSGPNR+G
Sbjct: 121 EELMAKGITGSGEGFDLPGKRLGGNSRQPPLLSLRKTALAAAEKRSQLGTLLPSGPNRIG 180
Query: 181 GDSAIMGXXXXXXXXXXXXERRLQDDLWCGSQSCEHSDHENVNNESAENIVQKRKIVGSS 240
GDS IM ERRLQDDLWCGSQSC++SDHE+VN ESAEN+V K+ IVG+S
Sbjct: 181 GDSVIMKALTPVQAAAMAAERRLQDDLWCGSQSCDNSDHEDVNRESAENLVNKQIIVGTS 240
Query: 241 RLTDNSTLPSDQVSRKRSCSKDSSLPVHSSGAPIFVNLTADAQKIGSITEYQIGSQQRSF 300
RLT NSTLP D SRKRS KDSSLP HSS FV+LT D K G + +Q GSQQRS
Sbjct: 241 RLTHNSTLPLDPTSRKRSRDKDSSLPAHSSSNSNFVDLTMDTPKKGCVNGHQTGSQQRSS 300
Query: 301 GLERIXXXXXXXXXXXXXXXXXXXXXXXXGDNKTFHSEESAMWECPMCTLLNQTFAPICE 360
GLE I ++ HSEE+AMW+C MCTLLN++ APICE
Sbjct: 301 GLENILHSQAGSTSRNLPSSSGSLSGD----SRPLHSEETAMWQCLMCTLLNKSLAPICE 356
Query: 361 LCGTQQPKDVTTKYSTWSCKFCTLDNSVKMEKCSACDQWRYSHGPPMSVNLG 412
LCGTQQPKDVTTK++TWSCKFCTL+NS K+E+CSACD+WRYS+GP NLG
Sbjct: 357 LCGTQQPKDVTTKHNTWSCKFCTLENSAKLERCSACDEWRYSNGP----NLG 404
>Medtr3g058580.2 | zinc ion-binding protein | HC |
chr3:23289865-23288255 | 20130731
Length = 313
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/320 (67%), Positives = 243/320 (75%), Gaps = 8/320 (2%)
Query: 93 MLHELCHNAHSSHNAAFYKLWDQLRKECEELMAKGITGSGDGFDVPGKRLGGNSRQPPLS 152
MLHELCHNAH HNA+FYKLWD+LRKECEELMAKGITGSG+GFD+PGKRLGGNSRQPPL
Sbjct: 1 MLHELCHNAHGPHNASFYKLWDELRKECEELMAKGITGSGEGFDLPGKRLGGNSRQPPLL 60
Query: 153 SLRKTALAAAEKRSRLGSLLPSGPNRLGGDSAIMGXXXXXXXXXXXXERRLQDDLWCGSQ 212
SLRKTALAAAEKRS+LG+LLPSGPNR+GGDS IM ERRLQDDLWCGSQ
Sbjct: 61 SLRKTALAAAEKRSQLGTLLPSGPNRIGGDSVIMKALTPVQAAAMAAERRLQDDLWCGSQ 120
Query: 213 SCEHSDHENVNNESAENIVQKRKIVGSSRLTDNSTLPSDQVSRKRSCSKDSSLPVHSSGA 272
SC++SDHE+VN ESAEN+V K+ IVG+SRLT NSTLP D SRKRS KDSSLP HSS
Sbjct: 121 SCDNSDHEDVNRESAENLVNKQIIVGTSRLTHNSTLPLDPTSRKRSRDKDSSLPAHSSSN 180
Query: 273 PIFVNLTADAQKIGSITEYQIGSQQRSFGLERIXXXXXXXXXXXXXXXXXXXXXXXXGDN 332
FV+LT D K G + +Q GSQQRS GLE I
Sbjct: 181 SNFVDLTMDTPKKGCVNGHQTGSQQRSSGLENILHSQAGSTSRNLPSSSGSLSGDS---- 236
Query: 333 KTFHSEESAMWECPMCTLLNQTFAPICELCGTQQPKDVTTKYSTWSCKFCTLDNSVKMEK 392
+ HSEE+AMW+C MCTLLN++ APICELCGTQQPKDVTTK++TWSCKFCTL+NS K+E+
Sbjct: 237 RPLHSEETAMWQCLMCTLLNKSLAPICELCGTQQPKDVTTKHNTWSCKFCTLENSAKLER 296
Query: 393 CSACDQWRYSHGPPMSVNLG 412
CSACD+WRYS+GP NLG
Sbjct: 297 CSACDEWRYSNGP----NLG 312
>Medtr2g105670.1 | zinc ion-binding protein | LC |
chr2:45557393-45555830 | 20130731
Length = 232
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MNSGDLNKVWEINALKRKPRPEEATKMLEKIAKQVQPIMRKHNWRVKLLSEFCPSNPXXX 60
M+ D+NKVWEI +L K +EA K+LEK+AKQVQPIM W+V+LLSEF P++P
Sbjct: 1 MDFSDVNKVWEIKSLN-KIGEDEARKILEKVAKQVQPIMADRRWKVELLSEFYPADPTLL 59
Query: 61 XXXXXXXXXXKLRLRRPNRDSEFYPFDEVLDTMLHELCHNAHSSHNAAFYKLWDQLRKEC 120
+LRLRRP+RD +F+P++E+LDTMLHELCHN + HN FY LWD++RKEC
Sbjct: 60 GENIGSGAEVRLRLRRPDRDWDFFPYEEILDTMLHELCHNEYGPHNTHFYNLWDEIRKEC 119
Query: 121 EELMAKGITG 130
EELM KG +G
Sbjct: 120 EELMVKGFSG 129
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 341 AMWECPMCTLLNQTFAPICELCGTQQPKDVTTKYSTWSCKFCTLDNSVKMEKCSACDQWR 400
A W+C CTLLN+ +CE CGT++ KDV K+ WSCKFCTL+N++K+++C AC +WR
Sbjct: 161 AKWQCNTCTLLNEPLLLLCEACGTKKEKDVL-KFKVWSCKFCTLENNIKLDRCLACGEWR 219
Query: 401 YSHGPPMSVNLGS 413
+SHGP +S G+
Sbjct: 220 FSHGPLVSPYAGT 232
>Medtr3g082840.3 | zinc metalloproteinase-like protein, putative |
HC | chr3:37388747-37394906 | 20130731
Length = 577
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 8 KVWEINALKRKPRPEEATKMLEKIAKQ--VQPIMRKHNWRVKLLSEFCP------SNPXX 59
+ EI +K P P EA K + +A + +M KH WRV +++E P S
Sbjct: 143 RTLEIPGVKLNPPPSEALKRMHMLAADPGIVAVMNKHRWRVGIMTEMAPIGYVGVSPKCI 202
Query: 60 XXXXXXXXXXXKLRLRRPNRDSEFYPFDEVLDTMLHELCHNAHSSHNAAFYKLWDQLRKE 119
LRLR + F ++ + T+LHEL H HS H+A FY L QL +E
Sbjct: 203 LGFNKNHGEEISLRLRTDDLKG-FRKYESIKKTLLHELAHMIHSEHDANFYALDKQLNQE 261
Query: 120 CEEL---MAKGITGSG-------------DGFDVPGKRLGGNSRQPPLSSLRKTALAAAE 163
L + G T SG D ++P ++LGG SR L + R++++ AA
Sbjct: 262 AASLDWTRSAGHTLSGMRSSEIYEDDFIEDSSNIP-QKLGG-SRSDQLMNARESSVIAAY 319
Query: 164 KR 165
R
Sbjct: 320 HR 321
>Medtr3g082840.2 | zinc metalloproteinase-like protein, putative |
HC | chr3:37388892-37394906 | 20130731
Length = 577
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 8 KVWEINALKRKPRPEEATKMLEKIAKQ--VQPIMRKHNWRVKLLSEFCP------SNPXX 59
+ EI +K P P EA K + +A + +M KH WRV +++E P S
Sbjct: 143 RTLEIPGVKLNPPPSEALKRMHMLAADPGIVAVMNKHRWRVGIMTEMAPIGYVGVSPKCI 202
Query: 60 XXXXXXXXXXXKLRLRRPNRDSEFYPFDEVLDTMLHELCHNAHSSHNAAFYKLWDQLRKE 119
LRLR + F ++ + T+LHEL H HS H+A FY L QL +E
Sbjct: 203 LGFNKNHGEEISLRLRTDDLKG-FRKYESIKKTLLHELAHMIHSEHDANFYALDKQLNQE 261
Query: 120 CEEL---MAKGITGSG-------------DGFDVPGKRLGGNSRQPPLSSLRKTALAAAE 163
L + G T SG D ++P ++LGG SR L + R++++ AA
Sbjct: 262 AASLDWTRSAGHTLSGMRSSEIYEDDFIEDSSNIP-QKLGG-SRSDQLMNARESSVIAAY 319
Query: 164 KR 165
R
Sbjct: 320 HR 321
>Medtr3g082840.1 | zinc metalloproteinase-like protein, putative |
HC | chr3:37388603-37394906 | 20130731
Length = 620
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 8 KVWEINALKRKPRPEEATKMLEKIAKQ--VQPIMRKHNWRVKLLSEFCP------SNPXX 59
+ EI +K P P EA K + +A + +M KH WRV +++E P S
Sbjct: 186 RTLEIPGVKLNPPPSEALKRMHMLAADPGIVAVMNKHRWRVGIMTEMAPIGYVGVSPKCI 245
Query: 60 XXXXXXXXXXXKLRLRRPNRDSEFYPFDEVLDTMLHELCHNAHSSHNAAFYKLWDQLRKE 119
LRLR + F ++ + T+LHEL H HS H+A FY L QL +E
Sbjct: 246 LGFNKNHGEEISLRLRTDDLKG-FRKYESIKKTLLHELAHMIHSEHDANFYALDKQLNQE 304
Query: 120 CEEL---MAKGITGSG-------------DGFDVPGKRLGGNSRQPPLSSLRKTALAAAE 163
L + G T SG D ++P ++LGG SR L + R++++ AA
Sbjct: 305 AASLDWTRSAGHTLSGMRSSEIYEDDFIEDSSNIP-QKLGG-SRSDQLMNARESSVIAAY 362
Query: 164 KR 165
R
Sbjct: 363 HR 364