Miyakogusa Predicted Gene

Lj6g3v0753110.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0753110.3 Non Characterized Hit- tr|G7JY02|G7JY02_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,73.24,1e-18,DUF647,Protein of unknown function DUF647;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Protein of unk,CUFF.58219.3
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g044720.1 | UPF0420 C16orf58-like protein | HC | chr5:1963...    97   5e-21

>Medtr5g044720.1 | UPF0420 C16orf58-like protein | HC |
           chr5:19633846-19624339 | 20130731
          Length = 771

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 52/71 (73%), Gaps = 19/71 (26%)

Query: 2   YIRTMLSTQALLSAIGVGEKSATVIGATF-------------------QGSNLDSNAKMW 42
           YIRTMLSTQALLSAIGVGEKSATVIGATF                   QGSNLDSNAKMW
Sbjct: 417 YIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMW 476

Query: 43  RLVADLMNDLG 53
           RLVADLMNDLG
Sbjct: 477 RLVADLMNDLG 487