Miyakogusa Predicted Gene

Lj6g3v0647440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0647440.1 Non Characterized Hit- tr|I1MH32|I1MH32_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,55.1,1e-18,DUF565,Uncharacterised protein family
Ycf20,CUFF.58103.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g061530.1 | transmembrane protein, putative | HC | chr3:24...   260   3e-70

>Medtr3g061530.1 | transmembrane protein, putative | HC |
           chr3:24542170-24539621 | 20130731
          Length = 151

 Score =  260 bits (664), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 128/151 (84%), Positives = 137/151 (90%)

Query: 1   MAQSLSLISGGLGFRPIPITKVSVSGRFTPRSSAVLRIQAVQENGGPRRLVDIVRLIPEL 60
           M  S+SLIS GLGF  IP TKV V GRF PRSSA LRIQAVQENGG RRLVDI+RL+P+L
Sbjct: 1   MTHSMSLISIGLGFSQIPKTKVGVCGRFNPRSSARLRIQAVQENGGSRRLVDIIRLVPDL 60

Query: 61  SKNYFKSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTKFYYS 120
           SKNYF+ PSRR LFGGI+LLGGFYVAQTISLSFGAL VNDVIAAV+CVLLTEYVTKFYYS
Sbjct: 61  SKNYFRRPSRRTLFGGIALLGGFYVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYS 120

Query: 121 RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 151
           RPK+TFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 RPKITFPVALLNNFKMGFTYGLFIDAFKLAS 151