Miyakogusa Predicted Gene

Lj6g3v0635330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0635330.1 tr|F2EK69|F2EK69_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,73.58,0.000000000000001,RcbX,Chaperonin-like RbcX,CUFF.58443.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g061630.1 | chaperonin-like RbcX protein | HC | chr3:24598...   337   3e-93
Medtr3g061630.2 | chaperonin-like RbcX protein | HC | chr3:24598...   337   3e-93

>Medtr3g061630.1 | chaperonin-like RbcX protein | HC |
           chr3:24598506-24601280 | 20130731
          Length = 223

 Score =  337 bits (865), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 164/208 (78%), Positives = 187/208 (89%), Gaps = 3/208 (1%)

Query: 1   MVGALSVVGSSVMDSHTGPCLCVDALPTTNVNLKSG-GDVALCKSLMGKKHFLRSGGNGK 59
           MVGA+SV+GSS+MDSHTGPCLCVDALPTTN+NLK G GDV L K+LMGKKH  + GG G+
Sbjct: 1   MVGAISVIGSSMMDSHTGPCLCVDALPTTNMNLKIGCGDVVLWKNLMGKKHLEKRGG-GR 59

Query: 60  TMELSSSFTGPGWEWRLSVSRNCKKQR-RDRKMGIVNELGGQYEEGFDDVKTQMLNYFTV 118
           TM LSSSFT PG EWR+  SR+CKKQR  DR++ IV+ELGGQYE+ F+DVKTQMLNYFT 
Sbjct: 60  TMGLSSSFTDPGREWRVKFSRSCKKQRSEDRRVTIVSELGGQYEDTFEDVKTQMLNYFTY 119

Query: 119 KAVRTVLQQLYEMNPPKYTWFYNFVVSNKPTDGKRFLRSLGKEQRELAERVMVTRLHLYS 178
           KAVRTV+QQLYEMNPPKYTWFYNFVVSNKP DGKRF+R LGKEQ+ELAERVM+TRL+LY+
Sbjct: 120 KAVRTVMQQLYEMNPPKYTWFYNFVVSNKPQDGKRFIRLLGKEQQELAERVMLTRLNLYA 179

Query: 179 KWVKKCDHAQIYKEISDENLELMRERLM 206
           KWVKKC+HA+IY +ISDENLELMRERLM
Sbjct: 180 KWVKKCNHAEIYNQISDENLELMRERLM 207


>Medtr3g061630.2 | chaperonin-like RbcX protein | HC |
           chr3:24598146-24601555 | 20130731
          Length = 223

 Score =  337 bits (865), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 164/208 (78%), Positives = 187/208 (89%), Gaps = 3/208 (1%)

Query: 1   MVGALSVVGSSVMDSHTGPCLCVDALPTTNVNLKSG-GDVALCKSLMGKKHFLRSGGNGK 59
           MVGA+SV+GSS+MDSHTGPCLCVDALPTTN+NLK G GDV L K+LMGKKH  + GG G+
Sbjct: 1   MVGAISVIGSSMMDSHTGPCLCVDALPTTNMNLKIGCGDVVLWKNLMGKKHLEKRGG-GR 59

Query: 60  TMELSSSFTGPGWEWRLSVSRNCKKQR-RDRKMGIVNELGGQYEEGFDDVKTQMLNYFTV 118
           TM LSSSFT PG EWR+  SR+CKKQR  DR++ IV+ELGGQYE+ F+DVKTQMLNYFT 
Sbjct: 60  TMGLSSSFTDPGREWRVKFSRSCKKQRSEDRRVTIVSELGGQYEDTFEDVKTQMLNYFTY 119

Query: 119 KAVRTVLQQLYEMNPPKYTWFYNFVVSNKPTDGKRFLRSLGKEQRELAERVMVTRLHLYS 178
           KAVRTV+QQLYEMNPPKYTWFYNFVVSNKP DGKRF+R LGKEQ+ELAERVM+TRL+LY+
Sbjct: 120 KAVRTVMQQLYEMNPPKYTWFYNFVVSNKPQDGKRFIRLLGKEQQELAERVMLTRLNLYA 179

Query: 179 KWVKKCDHAQIYKEISDENLELMRERLM 206
           KWVKKC+HA+IY +ISDENLELMRERLM
Sbjct: 180 KWVKKCNHAEIYNQISDENLELMRERLM 207