Miyakogusa Predicted Gene

Lj6g3v0635190.3
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0635190.3 Non Characterized Hit- tr|G7LHI5|G7LHI5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,33.73,1e-17,Transposase_24,Transposase, Ptta/En/Spm,
plant,CUFF.58093.3
         (176 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g040975.1 | hypothetical protein | LC | chr8:15422135-1542...    52   2e-07
Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain ...    48   5e-06
Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain ...    48   5e-06
Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731          48   5e-06

>Medtr8g040975.1 | hypothetical protein | LC |
           chr8:15422135-15424182 | 20130731
          Length = 278

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 85  LETGKLPSRAQMYILTHTKKDGSFVNDAAKGVVEKLEVGLTQSTVDETQISPSDTLGITL 144
           L  G+  SR  MY ++H    G FVN+ A+   E L+V +  +  +      ++      
Sbjct: 21  LRYGREYSRGDMYAVSHKDAKGKFVNEYARQKAELLQVEMQNTQCE------NEAFFKVF 74

Query: 145 GEEHSGRVRCMGMGATPS 162
           G+EH+G VR MG+G TPS
Sbjct: 75  GKEHAGYVRSMGLGITPS 92


>Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr8:5709180-5705508 | 20130731
          Length = 694

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 19/174 (10%)

Query: 2   GKKWSAHKQRLWSEFNIPTKTIDEIIRNVPNGIDKDQWVRFVQYRMKPSTQERCRKNKEN 61
           G++W A K  L S +    + ID+      + ID+D W  F++ R +PS  E+    ++ 
Sbjct: 113 GERWKAFKYSLTSRYLFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLEKRLNAQQT 172

Query: 62  RSKQVIPH---TGGSKANSRRRHE------------IFLETGKLPSRAQMYILTHTKKDG 106
           ++    PH    GG +   ++  E            I +     P R + +     K  G
Sbjct: 173 QAHNKYPHRLSQGGYELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSG 232

Query: 107 SFVNDAAKGVVEKLEVGLTQSTVDETQISPSDTLGITLG-EEHSGRVRCMGMGA 159
            + ++  + V E ++  ++   V   Q    D L   LG +EH GRVR +G G 
Sbjct: 233 EYTSEDTRVVAETIDSLVSDGFV---QNGREDILVKALGQDEHPGRVRAVGRGV 283


>Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr2:16185805-16182137 | 20130731
          Length = 694

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 19/174 (10%)

Query: 2   GKKWSAHKQRLWSEFNIPTKTIDEIIRNVPNGIDKDQWVRFVQYRMKPSTQERCRKNKEN 61
           G++W A K  L S +    + ID+      + ID+D W  F++ R +PS  E+    ++ 
Sbjct: 113 GERWKAFKYSLTSRYLFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLEKRLNAQQT 172

Query: 62  RSKQVIPH---TGGSKANSRRRHE------------IFLETGKLPSRAQMYILTHTKKDG 106
           ++    PH    GG +   ++  E            I +     P R + +     K  G
Sbjct: 173 QAHNKYPHRLSQGGYELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSG 232

Query: 107 SFVNDAAKGVVEKLEVGLTQSTVDETQISPSDTLGITLG-EEHSGRVRCMGMGA 159
            + ++  + V E ++  ++   V   Q    D L   LG +EH GRVR +G G 
Sbjct: 233 EYTSEDTRVVAETIDSLVSDGFV---QNGREDILVKALGQDEHPGRVRAVGRGV 283


>Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731
          Length = 681

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 19/174 (10%)

Query: 2   GKKWSAHKQRLWSEFNIPTKTIDEIIRNVPNGIDKDQWVRFVQYRMKPSTQERCRKNKEN 61
           G++W A K  L S +    + ID+      + ID+D W  F++ R +PS  E+    ++ 
Sbjct: 113 GERWKAFKYSLTSRYLFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLEKRLNAQQT 172

Query: 62  RSKQVIPH---TGGSKANSRRRHE------------IFLETGKLPSRAQMYILTHTKKDG 106
           ++    PH    GG +   ++  E            I +     P R + +     K  G
Sbjct: 173 QAHNKYPHRLSQGGYELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSG 232

Query: 107 SFVNDAAKGVVEKLEVGLTQSTVDETQISPSDTLGITLG-EEHSGRVRCMGMGA 159
            + ++  + V E ++  ++   V   Q    D L   LG +EH GRVR +G G 
Sbjct: 233 EYTSEDTRVVAETIDSLVSDGFV---QNGREDILVKALGQDEHPGRVRAVGRGV 283