Miyakogusa Predicted Gene

Lj6g3v0609530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0609530.1 Non Characterized Hit- tr|I1J3Y8|I1J3Y8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7653
PE=,81.4,0.0000000006,FtsH protease domain-like,NULL; FTSH
HOMOLOG,NULL; METALLOPROTEASE M41 FTSH,NULL;
Peptidase_M41,Pept,CUFF.58088.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g462930.1 | ATP-dependent zinc metalloprotease FTSH protei...   137   3e-33
Medtr5g069780.1 | ATP-dependent zinc metalloprotease FTSH protei...   129   7e-31
Medtr5g069780.2 | ATP-dependent zinc metalloprotease FTSH protei...   129   7e-31

>Medtr3g462930.1 | ATP-dependent zinc metalloprotease FTSH protein |
           HC | chr3:25178238-25186964 | 20130731
          Length = 791

 Score =  137 bits (344), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 75/81 (92%), Gaps = 1/81 (1%)

Query: 1   MAYKAIAEYGLNQTIGPVSIATLSSGGIDESGGAP-WGRDQGHLVDLVQREVQTLLQSAL 59
           MAYKAIAEYGLNQ IGP+SI+TLSSGGIDESGGA  WG+DQG LV LVQ+EVQTLLQSAL
Sbjct: 662 MAYKAIAEYGLNQAIGPMSISTLSSGGIDESGGAARWGKDQGDLVGLVQKEVQTLLQSAL 721

Query: 60  AVALSIIRANTTVLEGLGAYL 80
           AVALSIIRAN TVLEGLGAYL
Sbjct: 722 AVALSIIRANPTVLEGLGAYL 742


>Medtr5g069780.1 | ATP-dependent zinc metalloprotease FTSH protein |
           HC | chr5:29599970-29607519 | 20130731
          Length = 793

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/81 (80%), Positives = 72/81 (88%), Gaps = 1/81 (1%)

Query: 1   MAYKAIAEYGLNQTIGPVSIATLSSGGIDESG-GAPWGRDQGHLVDLVQREVQTLLQSAL 59
           MAYKAIAEYGL+QTIGPVSI+TLS+GG DESG   PWGRDQG LVDLVQ+EV+ LLQSAL
Sbjct: 671 MAYKAIAEYGLSQTIGPVSISTLSNGGTDESGRSVPWGRDQGQLVDLVQKEVKALLQSAL 730

Query: 60  AVALSIIRANTTVLEGLGAYL 80
            VALSI+RAN TV+EGLGA L
Sbjct: 731 EVALSIVRANPTVVEGLGAQL 751


>Medtr5g069780.2 | ATP-dependent zinc metalloprotease FTSH protein |
           HC | chr5:29599970-29607519 | 20130731
          Length = 793

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/81 (80%), Positives = 72/81 (88%), Gaps = 1/81 (1%)

Query: 1   MAYKAIAEYGLNQTIGPVSIATLSSGGIDESG-GAPWGRDQGHLVDLVQREVQTLLQSAL 59
           MAYKAIAEYGL+QTIGPVSI+TLS+GG DESG   PWGRDQG LVDLVQ+EV+ LLQSAL
Sbjct: 671 MAYKAIAEYGLSQTIGPVSISTLSNGGTDESGRSVPWGRDQGQLVDLVQKEVKALLQSAL 730

Query: 60  AVALSIIRANTTVLEGLGAYL 80
            VALSI+RAN TV+EGLGA L
Sbjct: 731 EVALSIVRANPTVVEGLGAQL 751