Miyakogusa Predicted Gene

Lj6g3v0597010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0597010.1 tr|B9HCJ6|B9HCJ6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_867813 PE=4
SV=1,36.5,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF740,Uncharacterised protein family UPF0503; seg,,gene.g64502.t1.1
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g462680.1 | DUF740 family protein | HC | chr3:25062281-250...   335   4e-92
Medtr7g066730.1 | DUF740 family protein | HC | chr7:24313566-243...    68   1e-11

>Medtr3g462680.1 | DUF740 family protein | HC |
           chr3:25062281-25064443 | 20130731
          Length = 560

 Score =  335 bits (858), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 186/252 (73%), Positives = 204/252 (80%), Gaps = 3/252 (1%)

Query: 35  PGGSAETMHYYSDRRRRSFDTSNSRRKMVTGDNVDDLRVVSNAKVSPATTELFYGAKVLI 94
           PG SAET HYYSDRRRRSFD SN RRK     +VD+LRV+SNAKVSPATTELFYGAKVLI
Sbjct: 307 PGDSAETKHYYSDRRRRSFDRSNPRRKSAVIGDVDELRVISNAKVSPATTELFYGAKVLI 366

Query: 95  TENDLRDANLKSRNSV--QSDCVIASASKDACDVGIGVGQKGLKKFQKWGRLWTKLGLVH 152
           TE DLRDANLK +NSV  QSDC   SASK+ACDV IG  QKG  KF KWG+LW KLGLV 
Sbjct: 367 TEEDLRDANLKPKNSVNVQSDCRTGSASKEACDVEIGNDQKGTNKFHKWGKLWNKLGLVQ 426

Query: 153 RRKEGKLGKEECGTGDIDNKPIAEPWQKLRRAVNGQASESVSEKLIRSYSVSCRNQCSSG 212
           +RKE KLG+EE   GD+ NKPIAE WQKLRR VNGQ SESVS+KLIRSYSVSC+N   + 
Sbjct: 427 KRKEDKLGEEESVAGDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCKNHSRTA 486

Query: 213 GLVNGL-GVPETKGNVLNGRQELMLPKNRSVRHSSNNVDAGLLRFYLTPLKSYRRSRSGM 271
           GLVNGL G  ETK NVLNGRQEL L +NRSVR+S++NVD GLLRFYLTPLKSYRRSRSG 
Sbjct: 487 GLVNGLGGGTETKCNVLNGRQELTLQRNRSVRYSTSNVDTGLLRFYLTPLKSYRRSRSGK 546

Query: 272 SSLKDSFSTARS 283
           S+ KD   +ARS
Sbjct: 547 SNSKDFNPSARS 558


>Medtr7g066730.1 | DUF740 family protein | HC |
           chr7:24313566-24310624 | 20130731
          Length = 746

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 134/325 (41%), Gaps = 83/325 (25%)

Query: 35  PGGSAETMHYYSD---RRRRSFDTSNSRRKMVTG--DNVDDLRVVSNAKVSPATTE---- 85
           PG   +T  YYSD   RRR+S D S+S RK        +D+L+ VSNAKV+PAT      
Sbjct: 424 PGNQTQTKEYYSDSSTRRRKSLDRSSSIRKTAAAVVAEMDELKPVSNAKVTPATASVHAS 483

Query: 86  ---------------LFYGAKVLITENDLRD----ANLKSRNSVQSDCVIASASKDACDV 126
                          L +G KV+  + DLRD    +N  S NS++ DC  +       D 
Sbjct: 484 ASVNPVVNANAGIDYLLHGQKVV--DRDLRDYSNNSNSNSNNSLRDDCSESFELGGFRDN 541

Query: 127 GIGVGQKG------------LKKFQKWGRLWTKLGLVHRRKEGKLGKEE--------CGT 166
           G  VG                 K++    +W   G +HRR  G   KEE         G 
Sbjct: 542 GSVVGSNNGGGDRKGGSKKSSSKWKAAWSIW---GFIHRRSGGNNNKEEEDDRYSSRGGN 598

Query: 167 GDIDNKPIAEPWQKLRRAVNGQA------------SESVSEKLIRS-YSVSCRNQCSSGG 213
           G+   +  +E WQ+ R   NG                    K++RS  SVS RN  S G 
Sbjct: 599 GNGVERSYSESWQEFRGERNGDVRGGVGIGSIGGGGNGFDRKMLRSNSSVSWRNAPSMGM 658

Query: 214 LVNGL------------GVPETKGNV-LNGRQELMLPKNRSVRHSSNNV--DAGLLRFYL 258
              G              V  + G +   GR E +L +NRS R+S  N   + GLLR YL
Sbjct: 659 GGGGGGGGGGIFGGRKSDVNSSNGYLGRKGRDEFVLERNRSARYSPTNSMDNGGLLRLYL 718

Query: 259 TPLKSYRRSRSGMSSLKDSFSTARS 283
           TP  S RR+ +       + S ARS
Sbjct: 719 TP--SGRRNGASKGRSNQAHSIARS 741