Miyakogusa Predicted Gene

Lj6g3v0561720.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0561720.2 tr|A9UWY4|A9UWY4_MONBE Predicted protein
OS=Monosiga brevicollis GN=18680 PE=4 SV=1,26.56,1e-18,seg,NULL;
LMBR1,LMBR1-like membrane protein; UNCHARACTERIZED,NULL,CUFF.58028.2
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g089925.1 | LMBR1 integral membrane-like protein | HC | ch...   421   e-118
Medtr3g086840.1 | LMBR1 integral membrane-like protein | HC | ch...   409   e-114
Medtr4g094110.1 | LMBR1 integral membrane-like protein | HC | ch...   348   2e-96
Medtr8g089925.2 | LMBR1 integral membrane-like protein | HC | ch...   207   7e-54

>Medtr8g089925.1 | LMBR1 integral membrane-like protein | HC |
           chr8:37558335-37548952 | 20130731
          Length = 722

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/236 (85%), Positives = 212/236 (89%)

Query: 1   MWVFYLISLPLTMGMVVLTLRYFAGPDVPLYVLFTVGYTWFSSLSIIILVPADIWATISS 60
           MWVFY+ISLPLTMGMV+LTLRYFAGP VPLYVLFTVGYTWF SLSIIILVPADIW TISS
Sbjct: 1   MWVFYMISLPLTMGMVLLTLRYFAGPSVPLYVLFTVGYTWFVSLSIIILVPADIWVTISS 60

Query: 61  QLENGGISFLWSWSYWSTFLLTWAVVPLIQGFEDAGDFTVSERLKTSVHVNLVFYXXXXX 120
           QL+NGGISF WSWSYWSTFLLTWAVVPLIQGFEDAGDFTVSERLKTS+HVNLVFY     
Sbjct: 61  QLDNGGISFFWSWSYWSTFLLTWAVVPLIQGFEDAGDFTVSERLKTSIHVNLVFYLIVGS 120

Query: 121 XXXXXXXXXXMMHKSWSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPKGVWRNSDWTTR 180
                     MMH+ WSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPK VWRN+DWTTR
Sbjct: 121 IGFFGLILLIMMHRHWSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPKNVWRNADWTTR 180

Query: 181 QKVLSHKIAKMAVKLDDAHHELSNAIVVAQATSRQMSKRDPLRPYMDVVDKMLTQM 236
           QKVLSHKIAKMAV+LDDAH ELSNAIVVAQATS QMS+RDPLRPYMDV+D +LTQM
Sbjct: 181 QKVLSHKIAKMAVELDDAHQELSNAIVVAQATSNQMSRRDPLRPYMDVIDDVLTQM 236


>Medtr3g086840.1 | LMBR1 integral membrane-like protein | HC |
           chr3:39370616-39360812 | 20130731
          Length = 720

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/236 (81%), Positives = 207/236 (87%)

Query: 1   MWVFYLISLPLTMGMVVLTLRYFAGPDVPLYVLFTVGYTWFSSLSIIILVPADIWATISS 60
           MWVFYLISLPLT GMV+ TLRYFAGPDVP YVLFTVGYTWF SLSIIILVPADIWATI+S
Sbjct: 1   MWVFYLISLPLTTGMVLFTLRYFAGPDVPRYVLFTVGYTWFCSLSIIILVPADIWATIAS 60

Query: 61  QLENGGISFLWSWSYWSTFLLTWAVVPLIQGFEDAGDFTVSERLKTSVHVNLVFYXXXXX 120
             ENGGISF WSWSYWSTFLLTWAV PLIQGFEDAGDFTVSERLKTSVHVNLVFY     
Sbjct: 61  HNENGGISFFWSWSYWSTFLLTWAVAPLIQGFEDAGDFTVSERLKTSVHVNLVFYLIVGS 120

Query: 121 XXXXXXXXXXMMHKSWSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPKGVWRNSDWTTR 180
                     MMH++W+GS++G AM CSNTFGLVTGAFLLGFGLSEIPK +WRN+DW TR
Sbjct: 121 IGLFGIILLIMMHRTWTGSLMGFAMTCSNTFGLVTGAFLLGFGLSEIPKSIWRNADWGTR 180

Query: 181 QKVLSHKIAKMAVKLDDAHHELSNAIVVAQATSRQMSKRDPLRPYMDVVDKMLTQM 236
           QKVLSHKIA+MAVKLD+AH ELSNAIVVAQATS+QMSKRDPLRPYM+++D MLTQM
Sbjct: 181 QKVLSHKIAQMAVKLDEAHQELSNAIVVAQATSKQMSKRDPLRPYMNIIDDMLTQM 236


>Medtr4g094110.1 | LMBR1 integral membrane-like protein | HC |
           chr4:37281984-37276654 | 20130731
          Length = 709

 Score =  348 bits (894), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 164/239 (68%), Positives = 192/239 (80%), Gaps = 1/239 (0%)

Query: 1   MWVFYLISLPLTMGMVVLTLRYFAGPDVPLYVLFTVGYTWFSSLSIIILVPADIWATISS 60
           M VFY+ SLP+T+GMV+ TLRYF+GPDVP YVLFTV Y WF S+SIIILVPADIW T++ 
Sbjct: 1   MRVFYMFSLPMTIGMVIFTLRYFSGPDVPKYVLFTVAYAWFCSISIIILVPADIWTTLND 60

Query: 61  QLENGGISFLWSWSYWSTFLLTWAVVPLIQGFEDAGDFTVSERLKTSVHVNLVFYXXXXX 120
            + N  ISFLWS SYWSTFLLTWAVVPL+QG+EDAGDFTV  RL+TS+H NLVFY     
Sbjct: 61  AV-NVTISFLWSLSYWSTFLLTWAVVPLLQGYEDAGDFTVKARLRTSLHGNLVFYLSLGS 119

Query: 121 XXXXXXXXXXMMHKSWSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPKGVWRNSDWTTR 180
                      ++K WSGS+ G AMACSNTFGLVTGAFLLGFG+SEIPKG+W N+DW  +
Sbjct: 120 VALFGLILLITLNKFWSGSVRGFAMACSNTFGLVTGAFLLGFGMSEIPKGIWLNADWAIQ 179

Query: 181 QKVLSHKIAKMAVKLDDAHHELSNAIVVAQATSRQMSKRDPLRPYMDVVDKMLTQMVTS 239
           QK LSHK+AKMAVKLDDAH + SNAIV+ QATS+QMSKRD LRPYM+++DKML QM+  
Sbjct: 180 QKFLSHKVAKMAVKLDDAHQDFSNAIVITQATSKQMSKRDSLRPYMNIIDKMLVQMLNE 238


>Medtr8g089925.2 | LMBR1 integral membrane-like protein | HC |
           chr8:37556162-37548952 | 20130731
          Length = 592

 Score =  207 bits (527), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 95/106 (89%), Positives = 101/106 (95%)

Query: 131 MMHKSWSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPKGVWRNSDWTTRQKVLSHKIAK 190
           MMH+ WSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPK VWRN+DWTTRQKVLSHKIAK
Sbjct: 1   MMHRHWSGSILGLAMACSNTFGLVTGAFLLGFGLSEIPKNVWRNADWTTRQKVLSHKIAK 60

Query: 191 MAVKLDDAHHELSNAIVVAQATSRQMSKRDPLRPYMDVVDKMLTQM 236
           MAV+LDDAH ELSNAIVVAQATS QMS+RDPLRPYMDV+D +LTQM
Sbjct: 61  MAVELDDAHQELSNAIVVAQATSNQMSRRDPLRPYMDVIDDVLTQM 106