Miyakogusa Predicted Gene

Lj6g3v0528590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0528590.1 Non Characterized Hit- tr|J3N4T9|J3N4T9_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB10G2,53.26,4e-19,
,CUFF.58017.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g013450.2 | hypothetical protein | HC | chr3:3619689-36154...   142   6e-35
Medtr3g013450.1 | hypothetical protein | HC | chr3:3619689-36154...   142   7e-35
Medtr1g052680.1 | hypothetical protein | HC | chr1:21619248-2162...   122   1e-28
Medtr5g020180.1 | hypothetical protein | HC | chr5:7696939-76964...    54   4e-08

>Medtr3g013450.2 | hypothetical protein | HC | chr3:3619689-3615481
           | 20130731
          Length = 140

 Score =  142 bits (358), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 77/91 (84%)

Query: 1   MSTQTSQPEKQSSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQK 60
           M TQ +Q EK +SS A   SCRKKK EEA+FLEDVKDHIDEFINASMDEHKTCF+KTI+K
Sbjct: 50  MDTQKNQAEKPTSSAAVATSCRKKKHEEASFLEDVKDHIDEFINASMDEHKTCFQKTIKK 109

Query: 61  MFGLSKAVAEKNSNAVKEVESSLPLQTTVQD 91
           MFGLSK VAE NS A KEVESSLPLQT +++
Sbjct: 110 MFGLSKVVAEANSKATKEVESSLPLQTVLKE 140


>Medtr3g013450.1 | hypothetical protein | HC | chr3:3619689-3615494
           | 20130731
          Length = 145

 Score =  142 bits (358), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 77/91 (84%)

Query: 1   MSTQTSQPEKQSSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQK 60
           M TQ +Q EK +SS A   SCRKKK EEA+FLEDVKDHIDEFINASMDEHKTCF+KTI+K
Sbjct: 55  MDTQKNQAEKPTSSAAVATSCRKKKHEEASFLEDVKDHIDEFINASMDEHKTCFQKTIKK 114

Query: 61  MFGLSKAVAEKNSNAVKEVESSLPLQTTVQD 91
           MFGLSK VAE NS A KEVESSLPLQT +++
Sbjct: 115 MFGLSKVVAEANSKATKEVESSLPLQTVLKE 145


>Medtr1g052680.1 | hypothetical protein | HC |
          chr1:21619248-21620689 | 20130731
          Length = 82

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/91 (69%), Positives = 74/91 (81%), Gaps = 9/91 (9%)

Query: 1  MSTQTSQPEKQSSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQK 60
          M TQ SQ  ++ +S      CRKKK+EEATF+ED+KDHIDEFI+ASMDEHKTCF+KTI+K
Sbjct: 1  MDTQKSQANEKPTS------CRKKKNEEATFIEDLKDHIDEFIHASMDEHKTCFQKTIKK 54

Query: 61 MFGLSKAVAEKNSNAVKEVESSLPLQTTVQD 91
          MFGLSKAVAEKNS     VESSLPLQ T++D
Sbjct: 55 MFGLSKAVAEKNSEG---VESSLPLQRTLRD 82


>Medtr5g020180.1 | hypothetical protein | HC |
          chr5:7696939-7696484 | 20130731
          Length = 86

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 3/64 (4%)

Query: 2  STQTSQ-PEKQSSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQK 60
          S QT + P+ + + + T   C++ KS + +F+  +++H  EFI+AS+DEH+ C + TIQ 
Sbjct: 18 SNQTDEKPQVKPAQIVTF--CQRNKSRDGSFVSKLRNHFHEFIHASVDEHRRCLRNTIQN 75

Query: 61 MFGL 64
          ++ L
Sbjct: 76 VYFL 79