Miyakogusa Predicted Gene
- Lj6g3v0524040.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0524040.2 tr|C1K5B8|C1K5B8_WHEAT Chlorophyll a-b binding
protein OS=Triticum aestivum GN=CBP4 PE=2 SV=1,38.16,0.25,no
description,Chlorophyll a/b binding protein domain; Chlorophyll a-b
binding protein,Chlorophyll a,CUFF.58006.2
(160 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g070340.1 | light-harvesting complex I chlorophyll A/B-bin... 279 7e-76
Medtr4g015570.1 | light-harvesting complex I chlorophyll A/B-bin... 248 2e-66
Medtr6g033320.1 | light-harvesting complex I chlorophyll A/B-bin... 111 3e-25
Medtr2g081090.1 | light-harvesting complex I chlorophyll A/B-bin... 97 6e-21
Medtr2g081090.2 | light-harvesting complex I chlorophyll A/B-bin... 97 7e-21
Medtr6g011890.1 | light-harvesting complex I chlorophyll A/B-bin... 96 2e-20
Medtr6g012080.1 | light-harvesting complex I chlorophyll A/B-bin... 95 2e-20
Medtr6g011880.1 | light-harvesting complex I chlorophyll A/B-bin... 95 3e-20
Medtr6g011870.1 | light-harvesting complex I chlorophyll A/B-bin... 95 3e-20
Medtr6g060175.1 | light-harvesting complex I chlorophyll A/B-bin... 94 4e-20
Medtr4g094605.1 | light-harvesting complex I chlorophyll A/B-bin... 94 5e-20
Medtr2g008610.1 | light-harvesting complex I chlorophyll A/B-bin... 94 6e-20
Medtr6g012110.1 | light-harvesting complex I chlorophyll A/B-bin... 94 7e-20
Medtr5g097280.1 | light-harvesting complex I chlorophyll A/B-bin... 94 7e-20
Medtr6g060175.2 | light-harvesting complex I chlorophyll A/B-bin... 84 4e-17
Medtr1g026550.1 | light-harvesting complex I chlorophyll A/B-bin... 84 6e-17
Medtr6g043600.1 | light-harvesting complex I chlorophyll A/B-bin... 79 3e-15
Medtr3g435460.1 | light-harvesting complex I chlorophyll A/B-bin... 75 2e-14
Medtr3g435460.2 | light-harvesting complex I chlorophyll A/B-bin... 75 2e-14
Medtr2g042720.1 | light-harvesting complex I chlorophyll A/B-bin... 71 4e-13
Medtr3g101670.1 | light-harvesting complex I chlorophyll A/B-bin... 70 6e-13
Medtr8g023790.1 | light-harvesting complex I chlorophyll A/B-bin... 70 8e-13
Medtr5g098785.1 | light-harvesting complex I chlorophyll A/B-bin... 70 1e-12
Medtr5g098780.1 | light-harvesting complex I chlorophyll A/B-bin... 69 1e-12
Medtr5g098770.1 | light-harvesting complex I chlorophyll A/B-bin... 51 4e-07
>Medtr3g070340.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:31536436-31533674 |
20130731
Length = 278
Score = 279 bits (714), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/147 (92%), Positives = 142/147 (96%)
Query: 14 VFGIQRFRECEVIHGRWAMLGALGALSVEALTGVAWQDAGKVELVDGSSYLGLPLPFSIT 73
VFGIQRFRECEVIHGRWAMLGALGAL+VEA TGVAWQDAGKVELV+GSSY G LPFSI+
Sbjct: 132 VFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFSLPFSIS 191
Query: 74 TLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSRLA 133
TLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLA+DPEEKERLQLAEIKHSRLA
Sbjct: 192 TLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSRLA 251
Query: 134 MVVFLIFAIQAAVTGKGPISFLATFNK 160
MVVFLIFAIQAAVTGKGPI F+ATFN+
Sbjct: 252 MVVFLIFAIQAAVTGKGPIGFIATFNQ 278
>Medtr4g015570.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:4673903-4671256 |
20130731
Length = 289
Score = 248 bits (633), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/146 (82%), Positives = 132/146 (90%)
Query: 12 SPVFGIQRFRECEVIHGRWAMLGALGALSVEALTGVAWQDAGKVELVDGSSYLGLPLPFS 71
S VFG+QRFRECE+IHGRWAML LGAL+VE LTGV WQDAGKVELV+GS+YLG PLPFS
Sbjct: 127 SEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFS 186
Query: 72 ITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 131
ITTLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA+DPE+K LQLAEIKH+R
Sbjct: 187 ITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHAR 246
Query: 132 LAMVVFLIFAIQAAVTGKGPISFLAT 157
LAMV FL FA+QAA TGKGP++ AT
Sbjct: 247 LAMVAFLGFAVQAAATGKGPLNNWAT 272
>Medtr6g033320.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:10652924-10650230 |
20130731
Length = 242
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 5/145 (3%)
Query: 17 IQRFRECEVIHGRWAMLGALGALSVEALTGVAWQDAGKVELVDG--SSYLGLPLPF-SIT 73
++RF+E E+IH RWAML G L EAL W A + + G ++YLG P+P+ ++
Sbjct: 81 LERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLP 140
Query: 74 TLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSRLA 133
T++ IE L I ++E QR+ E DPEK+ YPGG FDPLG + DP++ ++ E+K+ RLA
Sbjct: 141 TILVIEFLSIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPKKFHEYKIKEVKNGRLA 199
Query: 134 MVVFL-IFAIQAAVTGKGPISFLAT 157
++ F+ I Q A G GP+ LAT
Sbjct: 200 LLAFVGIVVQQTAYPGTGPLENLAT 224
>Medtr2g081090.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993832-33992362 |
20130731
Length = 264
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALTG--------VAWQDAGKVELVDGS-SYLGLP-- 67
+ R EVIHGRWAMLGALG ++ E L W AG +G YLG P
Sbjct: 90 KNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNL 149
Query: 68 -LPFSITTLIWIEVLVIGYIE-FQRNA--ELDPEKRLYPGGKFFDPLGLANDPEEKERLQ 123
SI ++ +V+++G +E F+ N + LYPGG++FDPLGLA+DP L+
Sbjct: 150 VHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELK 209
Query: 124 LAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
+ EIK+ RLAM F +QA VTGKGP+ L
Sbjct: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
>Medtr2g081090.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993824-33992362 |
20130731
Length = 237
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALTG--------VAWQDAGKVELVDGS-SYLGLP-- 67
+ R EVIHGRWAMLGALG ++ E L W AG +G YLG P
Sbjct: 63 KNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNL 122
Query: 68 -LPFSITTLIWIEVLVIGYIE-FQRNA--ELDPEKRLYPGGKFFDPLGLANDPEEKERLQ 123
SI ++ +V+++G +E F+ N + LYPGG++FDPLGLA+DP L+
Sbjct: 123 VHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELK 182
Query: 124 LAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
+ EIK+ RLAM F +QA VTGKGP+ L
Sbjct: 183 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 214
>Medtr6g011890.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3572293-3573452 |
20130731
Length = 265
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 88/156 (56%), Gaps = 21/156 (13%)
Query: 18 QRFRECEVIHGRWAMLGALGALSVEAL--TGV-----AWQDAGKVELVDGS-SYLGLPLP 69
+ RE EVIH RWAMLGALG + E L GV W AG +G YLG P
Sbjct: 92 SKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 151
Query: 70 FSITTL--IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKE 120
++ IW ++V+++G +E R A +DP LYPGG F DPLGLA+DPE
Sbjct: 152 VHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLADDPEAFA 207
Query: 121 RLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L++ E+K+ RLAM F +QA VTGKGPI LA
Sbjct: 208 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 243
>Medtr6g012080.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3575571-3576676 |
20130731
Length = 265
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 89/155 (57%), Gaps = 21/155 (13%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALT--GV-----AWQDAGKVELVDGS-SYLGLPLPF 70
+ RE EVIH RWAMLGALG + E L+ GV W AG +G YLG P
Sbjct: 93 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152
Query: 71 SITTL--IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKER 121
++ IW ++V+++G +E R A +DP LYPGG F DPLGLA+DPE
Sbjct: 153 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLADDPEAFAE 208
Query: 122 LQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L++ E+K+ RLAM F +QA VTGKGP+ LA
Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243
>Medtr6g011880.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3569245-3570411 |
20130731
Length = 265
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 88/155 (56%), Gaps = 21/155 (13%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALT--GV-----AWQDAGKVELVDGS-SYLGLPLPF 70
+ RE EVIH RWAMLGALG + E L+ GV W AG +G YLG P
Sbjct: 93 KNRELEVIHSRWAMLGALGCVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152
Query: 71 SITTL--IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKER 121
++ IW ++V+++G +E R A +DP LYPGG F DPLGLA DPE
Sbjct: 153 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAE 208
Query: 122 LQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L++ E+K+ RLAM F +QA VTGKGPI LA
Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 243
>Medtr6g011870.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3563596-3564681 |
20130731
Length = 265
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 88/155 (56%), Gaps = 21/155 (13%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALT--GV-----AWQDAGKVELVDGS-SYLGLPLPF 70
+ RE EVIH RWAMLGALG + E L+ GV W AG +G YLG P
Sbjct: 93 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152
Query: 71 SITTL--IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKER 121
++ IW ++V+++G +E R A +DP LYPGG F DPLGLA DPE
Sbjct: 153 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAE 208
Query: 122 LQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L++ E+K+ RLAM F +QA VTGKGPI LA
Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 243
>Medtr6g060175.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668553-20672457 |
20130731
Length = 289
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALTGVA--------WQDAGKVELVDGSS--YLGLPL 68
+++ E+IH RWAMLGA G + EA W G + L+DG + Y G P+
Sbjct: 118 KYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGAL-LLDGGTLNYFGKPI 176
Query: 69 PFSITTLIWIEVLVIGYIEFQR-NAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEI 127
P ++ + EV+++G E+ R L+ E + +PGG F DPLGLANDP++ L++ EI
Sbjct: 177 PINLIVAVVAEVVLLGGAEYYRITNGLELEDKFHPGGPF-DPLGLANDPDQAAILKVKEI 235
Query: 128 KHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
K+ RLAM L F IQA VTG+GP+ LA
Sbjct: 236 KNGRLAMFAMLGFFIQAYVTGEGPVENLA 264
>Medtr4g094605.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:38356454-38357760 |
20130731
Length = 266
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 88/155 (56%), Gaps = 21/155 (13%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALT--GV-----AWQDAGKVELVDGS-SYLGLPLPF 70
+ RE EVIH RWAMLGALG + E L+ GV W AG +G YLG P
Sbjct: 94 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 71 SITTLIWI---EVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKER 121
+++ I +V+++G +E R A +DP LYPGG F DPLGLA+DPE
Sbjct: 154 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLADDPEAFAE 209
Query: 122 LQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L++ E+K+ RLAM F +QA VTGKGP+ LA
Sbjct: 210 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 244
>Medtr2g008610.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:1552950-1554469 |
20130731
Length = 261
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 42/176 (23%)
Query: 13 PVFGIQRFRECEVIHGRWAMLGALGALSVEALTGVAWQDAGKVELVDGSSYLGLPLPFSI 72
P F ++ +RE E+IHGRWAM LG +A +GV W +AG D ++ PFS
Sbjct: 95 PAF-LKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAG----ADPNAI----APFSF 145
Query: 73 TTLIWIEVLVIGYIEFQRNAE-LDPEKRL----------------------YPGGKFFDP 109
TL+ +++++G++E +R + +P+ + YPGGKFFDP
Sbjct: 146 GTLLGTQLILMGWVESKRWVDFFNPDSQSIEWATPWSKTAENFANATGEQGYPGGKFFDP 205
Query: 110 LGLAN---------DPEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L LA D E+ ERL+LAEIKH+RLAM+ LIF +A GK P+ L
Sbjct: 206 LSLAGTIENGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAG-QGKTPLGALG 260
>Medtr6g012110.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3585659-3584433 |
20130731
Length = 265
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 87/155 (56%), Gaps = 21/155 (13%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEAL--TGV-----AWQDAGKVELVDGS-SYLGLPLPF 70
+ RE EVIH RWAMLGALG + E L GV W AG +G YLG P
Sbjct: 93 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152
Query: 71 SITTL--IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKER 121
++ IW ++V+++G +E R A +DP LYPGG F DPLGLA DPE
Sbjct: 153 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSF-DPLGLAEDPEAFAE 208
Query: 122 LQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLA 156
L++ E+K+ RLAM F +QA VTGKGP+ LA
Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLKNLA 243
>Medtr5g097280.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:42601906-42603573 |
20130731
Length = 265
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 85/154 (55%), Gaps = 21/154 (13%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEAL--TGV-----AWQDAGKVELVDGS-SYLGLPLPF 70
R RE EVIH RWAMLGALG E L GV W AG +G YLG P
Sbjct: 93 RNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 152
Query: 71 SITTLIWI---EVLVIGYIEFQR------NAELDPEKRLYPGGKFFDPLGLANDPEEKER 121
+++ I +V+++G++E R LDP LYPGG F DPLGLA+DP+
Sbjct: 153 HAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP---LYPGGAF-DPLGLADDPDAFAE 208
Query: 122 LQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
L++ E+K+ RLAM F +QA VTGKGP+ L
Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPVQNL 242
>Medtr6g060175.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668922-20672420 |
20130731
Length = 279
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 29 RWAMLGALGALSVEALTGVA--------WQDAGKVELVDGSS--YLGLPLPFSITTLIWI 78
+WAMLGA G + EA W G + L+DG + Y G P+P ++ +
Sbjct: 118 KWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGAL-LLDGGTLNYFGKPIPINLIVAVVA 176
Query: 79 EVLVIGYIEFQR-NAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSRLAMVVF 137
EV+++G E+ R L+ E + +PGG F DPLGLANDP++ L++ EIK+ RLAM
Sbjct: 177 EVVLLGGAEYYRITNGLELEDKFHPGGPF-DPLGLANDPDQAAILKVKEIKNGRLAMFAM 235
Query: 138 LIFAIQAAVTGKGPISFLA 156
L F IQA VTG+GP+ LA
Sbjct: 236 LGFFIQAYVTGEGPVENLA 254
>Medtr1g026550.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8663216 |
20130731
Length = 333
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 85/160 (53%), Gaps = 23/160 (14%)
Query: 17 IQRFRECEVIHGRWAMLGALGALSVEALT--GV------AWQDAGKVELV-DGSSYLGLP 67
+Q++ E++H RWAML ++GAL E L GV W G +L D YLG+P
Sbjct: 150 LQKYFNFEILHARWAMLASVGALIPELLDLLGVFHFVEPVWWRVGYSKLQGDTLDYLGIP 209
Query: 68 ---LPFS--ITTLIWIEVLVIGYIEFQRNAELD---------PEKRLYPGGKFFDPLGLA 113
L S + + + L++ E+ R ++ P YPGG FDPL L+
Sbjct: 210 GLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLS 269
Query: 114 NDPEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIS 153
DPE E L++ EIK+ RLAM+ +L F QAA+TGKGP+
Sbjct: 270 KDPEAFEELKVKEIKNGRLAMMAWLGFFTQAALTGKGPVQ 309
>Medtr6g043600.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:13275588-13276379 |
20130731
Length = 229
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Query: 19 RFRECEVIHGRWAMLGALGALSVEALTGVAWQDAGKVELVDGSSYLGLPLPFSITTLIW- 77
+ RE EVIH RWAM + + G LV S L IW
Sbjct: 77 KNRELEVIHSRWAMFDRWFKARSQIFSEGGLDYLGNPSLVHAQSILA----------IWA 126
Query: 78 IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 131
+V+++G +E R A +DP LYPGG F DPLGLA+DPE L++ EIK+ R
Sbjct: 127 CQVILMGAVEGYRIAGGPLGEVIDP---LYPGGSF-DPLGLADDPEAFVELKVKEIKNGR 182
Query: 132 LAMVVFLIFAIQAAVTGKGPISFLA 156
LAM F +QA VTGKGP+ LA
Sbjct: 183 LAMFSMFGFFVQAIVTGKGPLENLA 207
>Medtr3g435460.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11610138-11613272 |
20130731
Length = 253
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 74/159 (46%), Gaps = 39/159 (24%)
Query: 20 FRECEVIHGRWAMLGALGALSVEALTGVA------WQDAGKVELVDGSSYLGLPLPFSIT 73
F + E+++GRWAMLG G L E T + W DAGK E SS
Sbjct: 91 FVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSS----------- 139
Query: 74 TLIWIEVLVIGYIEFQR--------NAELDPEKRLY---------PGGKFFDPLGLANDP 116
TL IE ++ Y+E +R + DP + Y PGG F+PL A
Sbjct: 140 TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGG-IFNPLNFAPTL 198
Query: 117 EEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
E KE+ EI + RLAM+ FL F IQ VTGKGP L
Sbjct: 199 EAKEK----EIANGRLAMLAFLGFIIQHNVTGKGPFDNL 233
>Medtr3g435460.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11611493-11613272 |
20130731
Length = 192
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 74/159 (46%), Gaps = 39/159 (24%)
Query: 20 FRECEVIHGRWAMLGALGALSVEALTGVA------WQDAGKVELVDGSSYLGLPLPFSIT 73
F + E+++GRWAMLG G L E T + W DAGK E SS
Sbjct: 30 FVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSS----------- 78
Query: 74 TLIWIEVLVIGYIEFQR--------NAELDPEKRLY---------PGGKFFDPLGLANDP 116
TL IE ++ Y+E +R + DP + Y PGG F+PL A
Sbjct: 79 TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGG-IFNPLNFAPTL 137
Query: 117 EEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
E KE+ EI + RLAM+ FL F IQ VTGKGP L
Sbjct: 138 EAKEK----EIANGRLAMLAFLGFIIQHNVTGKGPFDNL 172
>Medtr2g042720.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:18633760-18631754 |
20130731
Length = 267
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 35/158 (22%)
Query: 22 ECEVIHGRWAMLGALGALSVEALTGV------AWQDAGKVELVDGSSYLGLPLPFSITTL 75
+ E++H RWAMLG G L E L + +W +AG VE Y P TTL
Sbjct: 102 QAELMHARWAMLGVSGILIPEILEKIGYVKNFSWYNAGSVE------YFADP-----TTL 150
Query: 76 IWIEVLVIGYIEFQRNAEL------DPEKRL-----------YPGGKFFDPLGLA-NDPE 117
+++ ++G++E +R A++ D E +L YPGG +FDP+ PE
Sbjct: 151 FIVQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPE 210
Query: 118 EKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
L+ EIK+ RLAM+ FL F QA G PI L
Sbjct: 211 PVMVLRTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNL 248
>Medtr3g101670.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:46810944-46809109 |
20130731
Length = 267
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 37/162 (22%)
Query: 20 FRECEVIHGRWAMLGALGALSVEAL--TGVA----WQDAGKVELVDGSSYLGLPLPFSIT 73
+ + E++H R+AMLG LG L + L GV W +AG V+ F+ T
Sbjct: 96 YVQAELVHSRFAMLGVLGILVTDLLRVAGVNSIPIWFEAGAVKY-----------EFANT 144
Query: 74 -TLIWIEVLVIGYIEFQR-------------------NAELDPEKRLYPGGKFFDPLGLA 113
TL+ +++L++GY E +R A L + YPGG +PLGLA
Sbjct: 145 GTLVVVQLLLMGYAETRRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLA 204
Query: 114 NDPEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
D + +L EIK+ RLAMV L +QA+VT GPI L
Sbjct: 205 KDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNL 246
>Medtr8g023790.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr8:8653598-8650676 |
20130731
Length = 268
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 35/158 (22%)
Query: 22 ECEVIHGRWAMLGALGALSVEALTGV------AWQDAGKVELVDGSSYLGLPLPFSITTL 75
+ E++H RWAMLGA G E LT + +W AG+ E TTL
Sbjct: 103 QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFT-----------DTTTL 151
Query: 76 IWIEVLVIGYIEFQRNAE-----------LDPEKRL------YPGGKFFDPLGLAN-DPE 117
+E++ IG+ E +R A+ + P +L YPGG +FDPLG + P+
Sbjct: 152 FIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQ 211
Query: 118 EKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
+ + L+ EIK+ RLAM+ + Q TG GPI L
Sbjct: 212 KLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 249
>Medtr5g098785.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43261216-43258628 |
20130731
Length = 277
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 24 EVIHGRWAMLGALGALSVEAL---------TGVAWQDAGKVELVDGSSYLGLPLPFSITT 74
E+I+GR+AMLGA GA++ E L T + W G + +Y T
Sbjct: 104 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWA-----DNYT 158
Query: 75 LIWIEVLVIGYIEFQRNAE------------LDPEKRL-------YPGGKFFDPLGLAND 115
L +E+ +G+ E +R + L EK L YPGG F+PLG D
Sbjct: 159 LFVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKD 218
Query: 116 PEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
+ + L+L E+K+ RLAM+ L + IQA VTG GP L
Sbjct: 219 EKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNL 258
>Medtr5g098780.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43257471-43255552 |
20130731
Length = 275
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 24 EVIHGRWAMLGALGALSVEAL---------TGVAWQDAGKVELVDGSSYLGLPLPFSITT 74
E+I+GR+AMLGA GA++ E L T + W G + +Y T
Sbjct: 102 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWA-----DNYT 156
Query: 75 LIWIEVLVIGYIEFQRNAE------------LDPEKRL-------YPGGKFFDPLGLAND 115
L +E+ +G+ E +R + L EK L YPGG F+PLG D
Sbjct: 157 LFVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKD 216
Query: 116 PEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFL 155
+ + L+L E+K+ RLAM+ L + IQA VTG GP L
Sbjct: 217 EKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNL 256
>Medtr5g098770.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43247918-43247634 |
20130731
Length = 94
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 101 YPGGKFFDPLGLANDPEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGP 151
YPGG F+PLG D + + L+L E+K+ RLAM+ L + +QA VT GP
Sbjct: 21 YPGGPIFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTRVGP 71