Miyakogusa Predicted Gene

Lj6g3v0519480.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0519480.2 Non Characterized Hit- tr|B9RMM4|B9RMM4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.36,3e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.57971.2
         (362 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g070300.1 | ATP-binding protein, putative | HC | chr3:3151...   224   1e-58
Medtr5g082480.2 | ATP-binding protein, putative | HC | chr5:3544...   153   2e-37
Medtr5g082480.1 | ATP-binding protein, putative | HC | chr5:3544...   137   1e-32
Medtr7g068220.1 | hypothetical protein | HC | chr7:24929422-2492...   110   3e-24
Medtr7g068220.2 | hypothetical protein | HC | chr7:24929422-2492...   110   3e-24
Medtr7g073720.2 | hypothetical protein | HC | chr7:27594516-2759...    60   4e-09
Medtr7g073720.1 | hypothetical protein | HC | chr7:27594597-2759...    60   4e-09
Medtr8g040940.2 | hypothetical protein | LC | chr8:15354196-1535...    55   9e-08
Medtr7g068220.4 | hypothetical protein | HC | chr7:24927692-2492...    49   6e-06

>Medtr3g070300.1 | ATP-binding protein, putative | HC |
           chr3:31513250-31508054 | 20130731
          Length = 628

 Score =  224 bits (570), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/227 (56%), Positives = 139/227 (61%), Gaps = 11/227 (4%)

Query: 1   MNRSFRAQESQMQAALKQREQQFGGLRGSVMKEKDEELALFLEMKKREKERXXXXXXXXX 60
           MNRSFRAQES MQ   K REQQFGGL GS   EKDEELALFLEM+KREKER         
Sbjct: 1   MNRSFRAQESSMQGGFK-REQQFGGLMGSGTTEKDEELALFLEMRKREKERNDLLLHTSE 59

Query: 61  XXXXXXGSNPSTSSIFNIPASAPI-PVRKNGTDDFLNSENDKNDYDWLLTPPGTPLFPSL 119
                 GSNP TS +FNI +S P  PVRK+G D+FLNSEN+KNDYDWLLTPPGTPLFPSL
Sbjct: 60  EFDSALGSNPGTSPLFNISSSMPTAPVRKSGADEFLNSENNKNDYDWLLTPPGTPLFPSL 119

Query: 120 EMESRKTVMSQLGSGNPASRPVALKSRLGNHQSEPAGRTSLVXXXXXXXXXXXXXXXXXX 179
           EME+RKTVMSQLG+  P +RP ALKSRL NHQ EP GRT L                   
Sbjct: 120 EMETRKTVMSQLGT--PTARPTALKSRLSNHQLEPTGRTGLASRQQTSSPVLSSSSGGTR 177

Query: 180 XXXXX-------XXXXXXXXXXXXXSTLNTASKPSRPSTPTRTMLPS 219
                                     +L TASKPSR STPTR  +PS
Sbjct: 178 RPSSSGGPGSRPASSSGRPSTPTGRPSLTTASKPSRSSTPTRNSIPS 224



 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 29/37 (78%)

Query: 323 TARQPTPVRGRQQAPVTSRQPTPTTSRQPASVTSRQQ 359
           ++RQPTPV+ RQ  PVT+RQPTPTT RQP    +RQQ
Sbjct: 332 SSRQPTPVKARQPTPVTARQPTPTTIRQPTPTKTRQQ 368


>Medtr5g082480.2 | ATP-binding protein, putative | HC |
           chr5:35446849-35441460 | 20130731
          Length = 616

 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 104/164 (63%), Gaps = 7/164 (4%)

Query: 1   MNRSFRAQESQMQAALKQREQQFGGLRGSVMKEKDEELALFLEMKKREKERXXXXXXXXX 60
           MNRSFRA E +MQ+AL QR  Q    R S  +  D+ELALF +MK  E E          
Sbjct: 1   MNRSFRATEPKMQSALWQRNHQLENFRSSSFR--DDELALFHQMKNCEIENDDLLLRDST 58

Query: 61  XXXXXX--GSNPSTSSIFNIPASAPIPVRKNGT-DDFLNSENDKNDYDWLLTPPGTPLFP 117
                     NP  S +FNI +S   PVR+ G  DDFLNSE DKNDY+WLLTPPGTPLFP
Sbjct: 59  EEFVDSPFDLNPKDSHLFNISSSTEAPVRRTGAADDFLNSETDKNDYEWLLTPPGTPLFP 118

Query: 118 SLEMESRKTVMSQLGSGNPASRPVALKSRLGNHQSEPAGRTSLV 161
           SLEME++KTVMS+LG+    +RP  LKSRL N  SE + R++LV
Sbjct: 119 SLEMETKKTVMSRLGAST--TRPTELKSRLANPPSEHSRRSNLV 160


>Medtr5g082480.1 | ATP-binding protein, putative | HC |
           chr5:35446498-35441348 | 20130731
          Length = 601

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 95/153 (62%), Gaps = 7/153 (4%)

Query: 12  MQAALKQREQQFGGLRGSVMKEKDEELALFLEMKKREKERXXXXXXXXXXXXXXX--GSN 69
           MQ+AL QR  Q    R S  +  D+ELALF +MK  E E                    N
Sbjct: 1   MQSALWQRNHQLENFRSSSFR--DDELALFHQMKNCEIENDDLLLRDSTEEFVDSPFDLN 58

Query: 70  PSTSSIFNIPASAPIPVRKNGT-DDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVM 128
           P  S +FNI +S   PVR+ G  DDFLNSE DKNDY+WLLTPPGTPLFPSLEME++KTVM
Sbjct: 59  PKDSHLFNISSSTEAPVRRTGAADDFLNSETDKNDYEWLLTPPGTPLFPSLEMETKKTVM 118

Query: 129 SQLGSGNPASRPVALKSRLGNHQSEPAGRTSLV 161
           S+LG+    +RP  LKSRL N  SE + R++LV
Sbjct: 119 SRLGAST--TRPTELKSRLANPPSEHSRRSNLV 149


>Medtr7g068220.1 | hypothetical protein | HC |
           chr7:24929422-24925193 | 20130731
          Length = 503

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 86/136 (63%), Gaps = 8/136 (5%)

Query: 30  VMKEKDEELALFLEMKKREKERXXXX----XXXXXXXXXXXGSNPSTSSIFNIPASAPIP 85
           VMKE+DEELALFLEM++REKE                     SN   S I  + +S  +P
Sbjct: 2   VMKERDEELALFLEMRRREKENEKNDLLLLQNSEELDLSNLESNHENSMISKMVSS--VP 59

Query: 86  VRKNGTDDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQLGSGNPASRPVALKS 145
            +K   ++FLNSENDK+DY+WLLTPP TPLFP+L+ ES+  + S+  +   +SRP ALK 
Sbjct: 60  PKKTVVEEFLNSENDKSDYEWLLTPPDTPLFPTLDKESQMPLKSETETH--SSRPTALKL 117

Query: 146 RLGNHQSEPAGRTSLV 161
           R+ N Q EP+ R+++V
Sbjct: 118 RVDNIQIEPSSRSNVV 133


>Medtr7g068220.2 | hypothetical protein | HC |
           chr7:24929422-24925205 | 20130731
          Length = 503

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 86/136 (63%), Gaps = 8/136 (5%)

Query: 30  VMKEKDEELALFLEMKKREKERXXXX----XXXXXXXXXXXGSNPSTSSIFNIPASAPIP 85
           VMKE+DEELALFLEM++REKE                     SN   S I  + +S  +P
Sbjct: 2   VMKERDEELALFLEMRRREKENEKNDLLLLQNSEELDLSNLESNHENSMISKMVSS--VP 59

Query: 86  VRKNGTDDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQLGSGNPASRPVALKS 145
            +K   ++FLNSENDK+DY+WLLTPP TPLFP+L+ ES+  + S+  +   +SRP ALK 
Sbjct: 60  PKKTVVEEFLNSENDKSDYEWLLTPPDTPLFPTLDKESQMPLKSETETH--SSRPTALKL 117

Query: 146 RLGNHQSEPAGRTSLV 161
           R+ N Q EP+ R+++V
Sbjct: 118 RVDNIQIEPSSRSNVV 133


>Medtr7g073720.2 | hypothetical protein | HC |
           chr7:27594516-27590461 | 20130731
          Length = 590

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 7/75 (9%)

Query: 88  KNGTDDFLNS-ENDKNDYDWLLTPPGTPLFPSLEMESRKTV------MSQLGSGNPASRP 140
           +NG +D L+S E  K+DYDWLLTPPGTP+FPS E E + T+      +S+  S   ASR 
Sbjct: 74  RNGIEDMLSSVEGGKHDYDWLLTPPGTPVFPSSENEPQSTLAPPRRSLSRSTSTAKASRL 133

Query: 141 VALKSRLGNHQSEPA 155
              +S   NH + PA
Sbjct: 134 SVSQSESNNHSNRPA 148


>Medtr7g073720.1 | hypothetical protein | HC |
           chr7:27594597-27590526 | 20130731
          Length = 590

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 7/75 (9%)

Query: 88  KNGTDDFLNS-ENDKNDYDWLLTPPGTPLFPSLEMESRKTV------MSQLGSGNPASRP 140
           +NG +D L+S E  K+DYDWLLTPPGTP+FPS E E + T+      +S+  S   ASR 
Sbjct: 74  RNGIEDMLSSVEGGKHDYDWLLTPPGTPVFPSSENEPQSTLAPPRRSLSRSTSTAKASRL 133

Query: 141 VALKSRLGNHQSEPA 155
              +S   NH + PA
Sbjct: 134 SVSQSESNNHSNRPA 148


>Medtr8g040940.2 | hypothetical protein | LC |
           chr8:15354196-15357869 | 20130731
          Length = 356

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 35  DEELALFLEMKKREKERXXXXXXXXXXXXXXXGSNPSTSSIFNIPASAPIPVRKNGTDDF 94
           +EEL+ F E+KK + E                       S++ IP+      RK    + 
Sbjct: 13  EEELSFFRELKKHQNEHIPNLLLCASEDYECDTKYVGKFSLYRIPSG-----RKENGLEL 67

Query: 95  LNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQ 130
           L ++  K+D+DWL TPP TPLFPSLEME    +++Q
Sbjct: 68  LETKT-KSDFDWLKTPPATPLFPSLEMEPSPNLVTQ 102


>Medtr7g068220.4 | hypothetical protein | HC |
           chr7:24927692-24925193 | 20130731
          Length = 424

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)

Query: 106 WLLTPPGTPLFPSLEMESRKTVMSQLGSGNPASRPVALKSRLGNHQSEPAGRTSLV 161
            LLTPP TPLFP+L+ ES+  + S+  +   +SRP ALK R+ N Q EP+ R+++V
Sbjct: 1   MLLTPPDTPLFPTLDKESQMPLKSETETH--SSRPTALKLRVDNIQIEPSSRSNVV 54