Miyakogusa Predicted Gene

Lj6g3v0486190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0486190.1 Non Characterized Hit- tr|I1N0B1|I1N0B1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37946
PE,53.26,2e-16,seg,NULL,NODE_74811_length_677_cov_34.141804.path2.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g095660.1 | transmembrane protein, putative | HC | chr5:41...    81   2e-16
Medtr3g058900.1 | transmembrane protein, putative | HC | chr3:23...    62   2e-10
Medtr3g058920.1 | transmembrane protein, putative | LC | chr3:23...    60   5e-10

>Medtr5g095660.1 | transmembrane protein, putative | HC |
          chr5:41815084-41814217 | 20130731
          Length = 96

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 6/98 (6%)

Query: 1  MEIPEPLYKFRYHILATLLIGLGTFSLIRYAPSLLTILTFFWPLILSTALVLAVVIAFTF 60
          M+IPE L K RYHI+A LL+ +  FSLI  AP L+T+ T+FWPL LSTALVLA+V  F  
Sbjct: 1  MKIPEKLLKLRYHIIAALLLCITLFSLIAMAPKLVTLFTYFWPLFLSTALVLALVFVFAK 60

Query: 61 TSPSNPNDNDAAPIPKPAEELLQYVVADDXXXXXXXND 98
          TSP    D   A I K    LL YV  D        N+
Sbjct: 61 TSPLPQTD---ASIHKG---LLDYVAGDHESQLDLHNN 92


>Medtr3g058900.1 | transmembrane protein, putative | HC |
          chr3:23518407-23518033 | 20130731
          Length = 124

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 1  MEIPEPLYKFRYHILATLLIGLGTFSLIRYAPSLLTILTFFWPLILSTALVLAVVIAFTF 60
          M+I + L+KF+++++  L+  L TF+     P+++T++ FF PL+ +T L   +V+  T 
Sbjct: 1  MDIQQELFKFKHYMIGALISLLATFTFFHLLPAIITLIIFFSPLLFTTTLFTVIVVILTN 60

Query: 61 TSPSNPNDNDAAPIPKPAEELLQYVV 86
          T+P N   ND   +P+  EE+++Y V
Sbjct: 61 TTPFN---NDRIHVPRRREEIVEYYV 83


>Medtr3g058920.1 | transmembrane protein, putative | LC |
          chr3:23524303-23523905 | 20130731
          Length = 132

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 1  MEIPEPLYKFRYHILATLLIGLGTFSLIRYAPSLLTILTFFWPLILSTALVLAVVIAFTF 60
          M+I + L+KF+ +I   L+  L  F  I   P ++T++TF++PL  STAL   V+   T 
Sbjct: 2  MDIQQELFKFKPYISGALISFLAIFIFIHLLPFIITMVTFYFPLFFSTALFAVVIFVLTK 61

Query: 61 TSPSNPNDNDAAPIPKPAEELLQYVV 86
           +P N   ND   +P+ AEE+L+Y V
Sbjct: 62 ITPPN---NDPIHVPRLAEEILEYFV 84