Miyakogusa Predicted Gene
- Lj6g3v0486190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0486190.1 Non Characterized Hit- tr|I1N0B1|I1N0B1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37946
PE,53.26,2e-16,seg,NULL,NODE_74811_length_677_cov_34.141804.path2.1
(109 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g095660.1 | transmembrane protein, putative | HC | chr5:41... 81 2e-16
Medtr3g058900.1 | transmembrane protein, putative | HC | chr3:23... 62 2e-10
Medtr3g058920.1 | transmembrane protein, putative | LC | chr3:23... 60 5e-10
>Medtr5g095660.1 | transmembrane protein, putative | HC |
chr5:41815084-41814217 | 20130731
Length = 96
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 1 MEIPEPLYKFRYHILATLLIGLGTFSLIRYAPSLLTILTFFWPLILSTALVLAVVIAFTF 60
M+IPE L K RYHI+A LL+ + FSLI AP L+T+ T+FWPL LSTALVLA+V F
Sbjct: 1 MKIPEKLLKLRYHIIAALLLCITLFSLIAMAPKLVTLFTYFWPLFLSTALVLALVFVFAK 60
Query: 61 TSPSNPNDNDAAPIPKPAEELLQYVVADDXXXXXXXND 98
TSP D A I K LL YV D N+
Sbjct: 61 TSPLPQTD---ASIHKG---LLDYVAGDHESQLDLHNN 92
>Medtr3g058900.1 | transmembrane protein, putative | HC |
chr3:23518407-23518033 | 20130731
Length = 124
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 1 MEIPEPLYKFRYHILATLLIGLGTFSLIRYAPSLLTILTFFWPLILSTALVLAVVIAFTF 60
M+I + L+KF+++++ L+ L TF+ P+++T++ FF PL+ +T L +V+ T
Sbjct: 1 MDIQQELFKFKHYMIGALISLLATFTFFHLLPAIITLIIFFSPLLFTTTLFTVIVVILTN 60
Query: 61 TSPSNPNDNDAAPIPKPAEELLQYVV 86
T+P N ND +P+ EE+++Y V
Sbjct: 61 TTPFN---NDRIHVPRRREEIVEYYV 83
>Medtr3g058920.1 | transmembrane protein, putative | LC |
chr3:23524303-23523905 | 20130731
Length = 132
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 1 MEIPEPLYKFRYHILATLLIGLGTFSLIRYAPSLLTILTFFWPLILSTALVLAVVIAFTF 60
M+I + L+KF+ +I L+ L F I P ++T++TF++PL STAL V+ T
Sbjct: 2 MDIQQELFKFKPYISGALISFLAIFIFIHLLPFIITMVTFYFPLFFSTALFAVVIFVLTK 61
Query: 61 TSPSNPNDNDAAPIPKPAEELLQYVV 86
+P N ND +P+ AEE+L+Y V
Sbjct: 62 ITPPN---NDPIHVPRLAEEILEYFV 84