Miyakogusa Predicted Gene
- Lj6g3v0485180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0485180.1 tr|D7MLU0|D7MLU0_ARALL Glycosyl hydrolase family
17 protein OS=Arabidopsis lyrata subsp. lyrata GN=A,73.61,2e-19,no
description,Glycoside hydrolase, catalytic domain;
(Trans)glycosidases,Glycoside hydrolase, super,CUFF.57899.1
(73 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g088885.1 | glucan endo-1,3-beta-glucosidase-like protein ... 122 6e-29
Medtr8g102340.1 | glucan endo-1,3-beta-glucosidase-like protein ... 68 1e-12
Medtr4g010200.1 | glycoside hydrolase family 17 protein | HC | c... 60 4e-10
Medtr3g116510.3 | glucan endo-1,3-beta-glucosidase-like protein ... 59 7e-10
Medtr3g116510.1 | glucan endo-1,3-beta-glucosidase-like protein ... 59 7e-10
Medtr4g114850.3 | glycoside hydrolase family 17 protein | HC | c... 59 1e-09
Medtr4g114850.4 | glycoside hydrolase family 17 protein | HC | c... 59 1e-09
Medtr4g114850.1 | glycoside hydrolase family 17 protein | HC | c... 58 2e-09
Medtr4g114850.2 | glycoside hydrolase family 17 protein | HC | c... 58 2e-09
Medtr3g083580.1 | O-glycosyl hydrolase family 17 protein | HC | ... 57 5e-09
Medtr4g084480.1 | glycoside hydrolase family 17 protein | HC | c... 56 6e-09
Medtr4g084480.2 | glycoside hydrolase family 17 protein | HC | c... 56 6e-09
Medtr4g084480.3 | glycoside hydrolase family 17 protein | HC | c... 56 6e-09
Medtr1g056640.1 | O-glycosyl hydrolase family 17 protein | HC | ... 55 2e-08
Medtr1g077990.1 | glucan endo-1,3-beta-glucosidase | HC | chr1:3... 52 2e-07
Medtr8g012400.1 | O-glycosyl hydrolase family 17 protein | HC | ... 50 3e-07
Medtr4g069940.1 | glucan endo-1,3-beta-glucosidase-like protein ... 50 6e-07
Medtr5g078200.1 | glucan endo-1,3-beta-glucosidase-like protein ... 50 7e-07
Medtr2g019345.1 | glycoside hydrolase family 17 protein | HC | c... 49 8e-07
Medtr7g026340.1 | glucan endo-1,3-beta-glucosidase-like protein ... 48 2e-06
Medtr3g080410.1 | glycoside hydrolase family 17 protein | HC | c... 48 2e-06
Medtr1g022160.2 | glucan endo-1,3-beta-glucosidase-like protein ... 48 2e-06
Medtr1g022160.5 | glucan endo-1,3-beta-glucosidase-like protein ... 48 2e-06
Medtr5g085580.1 | O-glycosyl hydrolase family 17 protein | HC | ... 48 3e-06
Medtr2g034480.1 | glucan endo-1,3-beta-glucosidase | HC | chr2:1... 47 3e-06
Medtr1g022160.4 | glucan endo-1,3-beta-glucosidase-like protein ... 47 4e-06
Medtr1g022160.1 | glucan endo-1,3-beta-glucosidase-like protein ... 47 4e-06
Medtr1g022160.3 | glucan endo-1,3-beta-glucosidase-like protein ... 47 4e-06
>Medtr6g088885.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr6:34072681-34076407 | 20130731
Length = 507
Score = 122 bits (307), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 62/73 (84%)
Query: 1 MATGFTLIFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYD 60
MA GF IF S L++LLDCC GSF+G+CYGR+ADDLP PDKV+QLVQ HKIKYVRIYD
Sbjct: 1 MARGFCFIFVVSSVLLMLLDCCYGSFVGICYGRNADDLPPPDKVSQLVQDHKIKYVRIYD 60
Query: 61 SNTQVLKAFANTG 73
SN QVLK+FANTG
Sbjct: 61 SNIQVLKSFANTG 73
>Medtr8g102340.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr8:43061844-43058920 | 20130731
Length = 480
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 39/43 (90%), Gaps = 1/43 (2%)
Query: 5 FTLIFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQL 47
F+ IFA SL +LLLDCCSGSFIG+CYGR+ADDLPTPDKVAQL
Sbjct: 7 FSFIFAASL-FLLLLDCCSGSFIGICYGRNADDLPTPDKVAQL 48
>Medtr4g010200.1 | glycoside hydrolase family 17 protein | HC |
chr4:2287326-2285234 | 20130731
Length = 391
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 7 LIFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVL 66
LI + + L+L +G++ GV YGR AD+LP P+ V L++ KIK VRIYD N QVL
Sbjct: 14 LILSATFSLVLGNKAFTGTY-GVNYGRVADNLPPPESVVTLLKAAKIKNVRIYDVNPQVL 72
Query: 67 KAFANTG 73
AF +G
Sbjct: 73 SAFKGSG 79
>Medtr3g116510.3 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr3:54507336-54501777 | 20130731
Length = 459
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 5 FTLIFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQ 64
F L F SLF + L S SF+GV YG++AD+LP P+ A+L+Q I VRIY ++
Sbjct: 8 FLLFF--SLFAIALSFADSQSFVGVNYGQTADNLPPPEATAKLLQSTTIGKVRIYGADPA 65
Query: 65 VLKAFANTG 73
++K+ AN+G
Sbjct: 66 IIKSLANSG 74
>Medtr3g116510.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr3:54507345-54501777 | 20130731
Length = 459
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 5 FTLIFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQ 64
F L F SLF + L S SF+GV YG++AD+LP P+ A+L+Q I VRIY ++
Sbjct: 8 FLLFF--SLFAIALSFADSQSFVGVNYGQTADNLPPPEATAKLLQSTTIGKVRIYGADPA 65
Query: 65 VLKAFANTG 73
++K+ AN+G
Sbjct: 66 IIKSLANSG 74
>Medtr4g114850.3 | glycoside hydrolase family 17 protein | HC |
chr4:47314170-47318114 | 20130731
Length = 360
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 19 LDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
L +G++ G+ YGR AD++P+PD+V L++ KI+ +RIYD++ VLKAF+ TG
Sbjct: 19 LQAFTGTY-GINYGRIADNIPSPDEVVTLLRAAKIRNIRIYDADHSVLKAFSGTG 72
>Medtr4g114850.4 | glycoside hydrolase family 17 protein | HC |
chr4:47314170-47318114 | 20130731
Length = 375
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 19 LDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
L +G++ G+ YGR AD++P+PD+V L++ KI+ +RIYD++ VLKAF+ TG
Sbjct: 19 LQAFTGTY-GINYGRIADNIPSPDEVVTLLRAAKIRNIRIYDADHSVLKAFSGTG 72
>Medtr4g114850.1 | glycoside hydrolase family 17 protein | HC |
chr4:47314170-47318114 | 20130731
Length = 386
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 19 LDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
L +G++ G+ YGR AD++P+PD+V L++ KI+ +RIYD++ VLKAF+ TG
Sbjct: 19 LQAFTGTY-GINYGRIADNIPSPDEVVTLLRAAKIRNIRIYDADHSVLKAFSGTG 72
>Medtr4g114850.2 | glycoside hydrolase family 17 protein | HC |
chr4:47314223-47318110 | 20130731
Length = 386
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 19 LDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
L +G++ G+ YGR AD++P+PD+V L++ KI+ +RIYD++ VLKAF+ TG
Sbjct: 19 LQAFTGTY-GINYGRIADNIPSPDEVVTLLRAAKIRNIRIYDADHSVLKAFSGTG 72
>Medtr3g083580.1 | O-glycosyl hydrolase family 17 protein | HC |
chr3:37722587-37725721 | 20130731
Length = 498
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 11 TSLFLMLL--LDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKA 68
TSLFL+ L ++ G+F+GV G DLP+ + +++ H+I +VR+YD+N +L+A
Sbjct: 8 TSLFLLTLATINNVLGAFVGVNIGTHVTDLPSASNIVAILKSHQITHVRLYDANAHMLQA 67
Query: 69 FANTG 73
+NTG
Sbjct: 68 LSNTG 72
>Medtr4g084480.1 | glycoside hydrolase family 17 protein | HC |
chr4:32857335-32855170 | 20130731
Length = 387
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 28 GVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANT 72
G+ YG+ A++LP P+KV +L+ KI RIYD+N Q+LKAFAN+
Sbjct: 26 GINYGQVANNLPQPEKVLELLSTLKITKTRIYDTNPQILKAFANS 70
>Medtr4g084480.2 | glycoside hydrolase family 17 protein | HC |
chr4:32857494-32854795 | 20130731
Length = 399
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 28 GVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANT 72
G+ YG+ A++LP P+KV +L+ KI RIYD+N Q+LKAFAN+
Sbjct: 33 GINYGQVANNLPQPEKVLELLSTLKITKTRIYDTNPQILKAFANS 77
>Medtr4g084480.3 | glycoside hydrolase family 17 protein | HC |
chr4:32857494-32856040 | 20130731
Length = 392
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 28 GVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANT 72
G+ YG+ A++LP P+KV +L+ KI RIYD+N Q+LKAFAN+
Sbjct: 33 GINYGQVANNLPQPEKVLELLSTLKITKTRIYDTNPQILKAFANS 77
>Medtr1g056640.1 | O-glycosyl hydrolase family 17 protein | HC |
chr1:24772577-24774649 | 20130731
Length = 494
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 27 IGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
IG+ YGR AD+LPTP KV +L++ V++YD++ VL A AN+G
Sbjct: 38 IGINYGRIADNLPTPSKVVELLKAQGFNRVKLYDTDATVLTALANSG 84
>Medtr1g077990.1 | glucan endo-1,3-beta-glucosidase | HC |
chr1:34870011-34868635 | 20130731
Length = 407
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 27 IGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
IG+ YG+ A++LP+P+ V L++ V++YD++ +VLKAFANTG
Sbjct: 31 IGINYGQIANNLPSPENVVTLIKCIGATKVKLYDADPKVLKAFANTG 77
>Medtr8g012400.1 | O-glycosyl hydrolase family 17 protein | HC |
chr8:3529720-3533281 | 20130731
Length = 463
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 28 GVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
GV YG+ ++LPTP L++ K K V+IYD+N Q+LKA NTG
Sbjct: 30 GVNYGQLGNNLPTPTTSVSLIKNLKAKRVKIYDANPQILKALENTG 75
>Medtr4g069940.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr4:26313065-26308250 | 20130731
Length = 464
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 23 SGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
S SFIGV YG+ AD+LP P A L++ I +R+Y+++ ++K+ +N+G
Sbjct: 25 SQSFIGVNYGQVADNLPPPSATANLLKSTSIGKLRLYNADPSIIKSLSNSG 75
>Medtr5g078200.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr5:33413288-33417329 | 20130731
Length = 642
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 7 LIFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVL 66
L F LF + L+ FIGV G S D+P P +V L++ KI+ VR+YD++ +L
Sbjct: 3 LHFLLMLFAVSLVAADDAPFIGVNIGTSLSDMPHPTQVVALLKAQKIQNVRLYDADQAML 62
Query: 67 KAFANTG 73
A A TG
Sbjct: 63 VALAKTG 69
>Medtr2g019345.1 | glycoside hydrolase family 17 protein | HC |
chr2:6291396-6293688 | 20130731
Length = 397
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 8 IFATSLFLMLLLDCCS--GSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQV 65
IF T++F+ L + G G+ YG+ A++LP P+KV L+ + RIYD+N Q+
Sbjct: 3 IFITTMFIFLAFSLHADIGYCFGINYGQVANNLPQPEKVLVLLSTLNLTKTRIYDTNPQI 62
Query: 66 LKAFANT 72
L F+ +
Sbjct: 63 LSTFSKS 69
>Medtr7g026340.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr7:8742328-8738374 | 20130731
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 27 IGVCYGRSADDLPTPDKVAQLVQLHKI-KYVRIYDSNTQVLKAFANTG 73
IGV YG AD+LP P VA ++ + I V+I+D + Q+L+AFANTG
Sbjct: 23 IGVNYGTLADNLPPPATVANFLKTNTIVDRVKIFDVSPQILQAFANTG 70
>Medtr3g080410.1 | glycoside hydrolase family 17 protein | HC |
chr3:36362941-36364500 | 20130731
Length = 362
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 15 LMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
L LL D GS IGV YGR A++LP+ KV +L++ I V++YD++ VLK+ + +G
Sbjct: 17 LPLLAD---GSSIGVNYGRIANNLPSAFKVVKLLKSQGIDRVKLYDTDPAVLKSLSGSG 72
>Medtr1g022160.2 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr1:6896988-6892247 | 20130731
Length = 417
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 23 SGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
S F+GV YG+ AD+LP A+L+Q + VR+Y ++ ++K+ ANTG
Sbjct: 20 SDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTG 70
>Medtr1g022160.5 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr1:6896988-6892247 | 20130731
Length = 417
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 23 SGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
S F+GV YG+ AD+LP A+L+Q + VR+Y ++ ++K+ ANTG
Sbjct: 20 SDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTG 70
>Medtr5g085580.1 | O-glycosyl hydrolase family 17 protein | HC |
chr5:36987179-36984544 | 20130731
Length = 470
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 27 IGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANT 72
IG+ YGR A++LP+ KV QL++ I +V+IYD++ VL+A + +
Sbjct: 25 IGINYGRIANNLPSATKVVQLLKSQGITHVKIYDTDPSVLRALSGS 70
>Medtr2g034480.1 | glucan endo-1,3-beta-glucosidase | HC |
chr2:13158771-13161430 | 20130731
Length = 362
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 8 IFATSLFLMLLLDCCSGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLK 67
+F LF + L+ IG+CYG ++LP ++V L + + IK +R+YD N L
Sbjct: 9 LFLLGLFTINLIHTADAQ-IGICYGMMGNNLPPANEVINLYKANNIKRMRLYDPNQAALN 67
Query: 68 AFANTG 73
A N+G
Sbjct: 68 ALRNSG 73
>Medtr1g022160.4 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr1:6896988-6892247 | 20130731
Length = 486
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 23 SGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
S F+GV YG+ AD+LP A+L+Q + VR+Y ++ ++K+ ANTG
Sbjct: 20 SDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTG 70
>Medtr1g022160.1 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr1:6896957-6893217 | 20130731
Length = 481
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 23 SGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
S F+GV YG+ AD+LP A+L+Q + VR+Y ++ ++K+ ANTG
Sbjct: 20 SDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTG 70
>Medtr1g022160.3 | glucan endo-1,3-beta-glucosidase-like protein |
HC | chr1:6896988-6892247 | 20130731
Length = 479
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 23 SGSFIGVCYGRSADDLPTPDKVAQLVQLHKIKYVRIYDSNTQVLKAFANTG 73
S F+GV YG+ AD+LP A+L+Q + VR+Y ++ ++K+ ANTG
Sbjct: 20 SDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTG 70