Miyakogusa Predicted Gene

Lj6g3v0468290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0468290.1 tr|B9MZQ3|B9MZQ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595547 PE=3 SV=1,66.67,2e-19,
,CUFF.58143.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g082470.1 | branched-chain-amino-acid aminotransferase-lik...   111   2e-25
Medtr1g083370.1 | branched-chain-amino-acid aminotransferase-lik...   107   2e-24

>Medtr1g082470.1 | branched-chain-amino-acid aminotransferase-like
          protein | HC | chr1:36659925-36667372 | 20130731
          Length = 602

 Score =  111 bits (277), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/63 (76%), Positives = 57/63 (90%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSF+QRDDI+VLDEPLY++FLRV+G DRPYRD LLS ME DGN++V+D IYG GNKK+R
Sbjct: 20 MYSFSQRDDIDVLDEPLYSHFLRVSGFDRPYRDQLLSNMESDGNKVVKDLIYGSGNKKFR 79

Query: 61 FCK 63
          FCK
Sbjct: 80 FCK 82


>Medtr1g083370.1 | branched-chain-amino-acid aminotransferase-like
          protein | HC | chr1:37096321-37102821 | 20130731
          Length = 552

 Score =  107 bits (268), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/63 (76%), Positives = 54/63 (85%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSF+QR+DIEVLDEPLYA+FLRV+G DRPYRD LLS ME DGN++V D IY PGN KYR
Sbjct: 18 MYSFSQRNDIEVLDEPLYAHFLRVSGFDRPYRDQLLSNMESDGNKVVNDIIYHPGNTKYR 77

Query: 61 FCK 63
          F K
Sbjct: 78 FVK 80