Miyakogusa Predicted Gene

Lj6g3v0467280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0467280.1 Non Characterized Hit- tr|B9S471|B9S471_RICCO
Putative uncharacterized protein OS=Ricinus communis G,53.57,4e-16,
,CUFF.58142.1
         (81 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g071640.1 | autophagy-related protein | HC | chr3:32169128...   133   3e-32
Medtr3g071640.2 | autophagy-related protein | HC | chr3:32169128...   131   1e-31

>Medtr3g071640.1 | autophagy-related protein | HC |
           chr3:32169128-32176491 | 20130731
          Length = 284

 Score =  133 bits (335), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/80 (78%), Positives = 69/80 (86%)

Query: 1   MECNALLANNIGGYHVCTAIGLGSKIDVEVIDKKNPHIGVIVKMSSSSPKYNCSLAVSVL 60
           MEC AL++NNIGGYHVC AIG G KID++VIDKKNPH+GV VKMSSSS KYNCSLAVSVL
Sbjct: 107 MECGALVSNNIGGYHVCAAIGRGPKIDIDVIDKKNPHVGVTVKMSSSSLKYNCSLAVSVL 166

Query: 61  CNVNRVQAPHTLEKLGACNY 80
           CNVN VQ P TLE+ G CNY
Sbjct: 167 CNVNGVQGPQTLERSGDCNY 186


>Medtr3g071640.2 | autophagy-related protein | HC |
           chr3:32169128-32176491 | 20130731
          Length = 201

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/80 (78%), Positives = 69/80 (86%)

Query: 1   MECNALLANNIGGYHVCTAIGLGSKIDVEVIDKKNPHIGVIVKMSSSSPKYNCSLAVSVL 60
           MEC AL++NNIGGYHVC AIG G KID++VIDKKNPH+GV VKMSSSS KYNCSLAVSVL
Sbjct: 24  MECGALVSNNIGGYHVCAAIGRGPKIDIDVIDKKNPHVGVTVKMSSSSLKYNCSLAVSVL 83

Query: 61  CNVNRVQAPHTLEKLGACNY 80
           CNVN VQ P TLE+ G CNY
Sbjct: 84  CNVNGVQGPQTLERSGDCNY 103