Miyakogusa Predicted Gene

Lj6g3v0451100.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0451100.2 Non Characterized Hit- tr|B6T1M8|B6T1M8_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4 SV=1,56.96,7e-19,no
description,Tetratricopeptide-like helical; Sel1-like
repeats.,Sel1-like; UNKNOWN PROTEIN,NULL; S,CUFF.57868.2
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072010.6 | Sel1 repeat protein | HC | chr3:32350754-32349...   175   2e-44
Medtr3g072010.1 | Sel1 repeat protein | HC | chr3:32350754-32349...   175   2e-44
Medtr3g072010.3 | Sel1 repeat protein | HC | chr3:32350754-32349...   175   2e-44
Medtr3g072010.2 | Sel1 repeat protein | HC | chr3:32350754-32349...   175   2e-44
Medtr3g072010.4 | Sel1 repeat protein | HC | chr3:32350754-32349...   175   2e-44
Medtr3g072010.5 | Sel1 repeat protein | HC | chr3:32350754-32349...   175   2e-44
Medtr7g071210.1 | hypothetical protein | HC | chr7:26379874-2637...   128   2e-30

>Medtr3g072010.6 | Sel1 repeat protein | HC | chr3:32350754-32349053
           | 20130731
          Length = 156

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 9/158 (5%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKP---AAFAVETPK 56
           M KS ESV   QELSRI  SA K +R K T QP S N+    RT  K        VE+P 
Sbjct: 1   MAKSFESVR--QELSRIAKSATKIHRPKQT-QPVSLNQFIAARTTKKQQDRTVGKVESPP 57

Query: 57  KKEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRK 116
           KK  VE  + R  LS+VVADCT RWF DTLKEA+ GD   QVLVGQMY SGYGVPR+P+K
Sbjct: 58  KK--VEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQMYCSGYGVPRNPQK 115

Query: 117 GHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           GHAWIS+ASRSRNSVW++SEKPPGYRASDSDS E E K
Sbjct: 116 GHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMENK 153


>Medtr3g072010.1 | Sel1 repeat protein | HC | chr3:32350754-32349053
           | 20130731
          Length = 156

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 9/158 (5%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKP---AAFAVETPK 56
           M KS ESV   QELSRI  SA K +R K T QP S N+    RT  K        VE+P 
Sbjct: 1   MAKSFESVR--QELSRIAKSATKIHRPKQT-QPVSLNQFIAARTTKKQQDRTVGKVESPP 57

Query: 57  KKEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRK 116
           KK  VE  + R  LS+VVADCT RWF DTLKEA+ GD   QVLVGQMY SGYGVPR+P+K
Sbjct: 58  KK--VEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQMYCSGYGVPRNPQK 115

Query: 117 GHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           GHAWIS+ASRSRNSVW++SEKPPGYRASDSDS E E K
Sbjct: 116 GHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMENK 153


>Medtr3g072010.3 | Sel1 repeat protein | HC | chr3:32350754-32349053
           | 20130731
          Length = 156

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 9/158 (5%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKP---AAFAVETPK 56
           M KS ESV   QELSRI  SA K +R K T QP S N+    RT  K        VE+P 
Sbjct: 1   MAKSFESVR--QELSRIAKSATKIHRPKQT-QPVSLNQFIAARTTKKQQDRTVGKVESPP 57

Query: 57  KKEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRK 116
           KK  VE  + R  LS+VVADCT RWF DTLKEA+ GD   QVLVGQMY SGYGVPR+P+K
Sbjct: 58  KK--VEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQMYCSGYGVPRNPQK 115

Query: 117 GHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           GHAWIS+ASRSRNSVW++SEKPPGYRASDSDS E E K
Sbjct: 116 GHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMENK 153


>Medtr3g072010.2 | Sel1 repeat protein | HC | chr3:32350754-32349053
           | 20130731
          Length = 156

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 9/158 (5%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKP---AAFAVETPK 56
           M KS ESV   QELSRI  SA K +R K T QP S N+    RT  K        VE+P 
Sbjct: 1   MAKSFESVR--QELSRIAKSATKIHRPKQT-QPVSLNQFIAARTTKKQQDRTVGKVESPP 57

Query: 57  KKEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRK 116
           KK  VE  + R  LS+VVADCT RWF DTLKEA+ GD   QVLVGQMY SGYGVPR+P+K
Sbjct: 58  KK--VEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQMYCSGYGVPRNPQK 115

Query: 117 GHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           GHAWIS+ASRSRNSVW++SEKPPGYRASDSDS E E K
Sbjct: 116 GHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMENK 153


>Medtr3g072010.4 | Sel1 repeat protein | HC | chr3:32350754-32349053
           | 20130731
          Length = 156

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 9/158 (5%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKP---AAFAVETPK 56
           M KS ESV   QELSRI  SA K +R K T QP S N+    RT  K        VE+P 
Sbjct: 1   MAKSFESVR--QELSRIAKSATKIHRPKQT-QPVSLNQFIAARTTKKQQDRTVGKVESPP 57

Query: 57  KKEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRK 116
           KK  VE  + R  LS+VVADCT RWF DTLKEA+ GD   QVLVGQMY SGYGVPR+P+K
Sbjct: 58  KK--VEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQMYCSGYGVPRNPQK 115

Query: 117 GHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           GHAWIS+ASRSRNSVW++SEKPPGYRASDSDS E E K
Sbjct: 116 GHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMENK 153


>Medtr3g072010.5 | Sel1 repeat protein | HC | chr3:32350754-32349053
           | 20130731
          Length = 156

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/158 (63%), Positives = 112/158 (70%), Gaps = 9/158 (5%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKP---AAFAVETPK 56
           M KS ESV   QELSRI  SA K +R K T QP S N+    RT  K        VE+P 
Sbjct: 1   MAKSFESVR--QELSRIAKSATKIHRPKQT-QPVSLNQFIAARTTKKQQDRTVGKVESPP 57

Query: 57  KKEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRK 116
           KK  VE  + R  LS+VVADCT RWF DTLKEA+ GD   QVLVGQMY SGYGVPR+P+K
Sbjct: 58  KK--VEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQMYCSGYGVPRNPQK 115

Query: 117 GHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           GHAWIS+ASRSRNSVW++SEKPPGYRASDSDS E E K
Sbjct: 116 GHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMENK 153


>Medtr7g071210.1 | hypothetical protein | HC |
           chr7:26379874-26375256 | 20130731
          Length = 100

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 69/84 (82%)

Query: 67  RTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHAWISKASR 126
           R PLS VVADC KRWF+DTL+EA+AGD  MQ+LVGQMY SGYGV +D +KG  W++KASR
Sbjct: 12  RFPLSGVVADCVKRWFKDTLREAKAGDVNMQILVGQMYCSGYGVAKDAQKGKLWLTKASR 71

Query: 127 SRNSVWKVSEKPPGYRASDSDSCE 150
            R+SVWKV +K PGY ASDSDS E
Sbjct: 72  VRSSVWKVGDKRPGYNASDSDSDE 95