Miyakogusa Predicted Gene
- Lj6g3v0437540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0437540.1 tr|G7IP58|G7IP58_MEDTR F-box protein SKIP19
OS=Medicago truncatula GN=MTR_2g019060 PE=4
SV=1,43.51,3e-19,RNI-like,NULL; no description,NULL; N7-RELATED
PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL,CUFF.57878.1
(136 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g018910.1 | F-box/LRR protein | HC | chr2:6040628-6044118 ... 108 1e-24
Medtr2g018940.1 | F-box/LRR protein | HC | chr2:6045280-6047439 ... 103 4e-23
Medtr2g018950.1 | F-box/LRR protein | HC | chr2:6051919-6054233 ... 102 8e-23
Medtr3g065610.1 | F-box/LRR protein | HC | chr3:29646510-2964808... 100 3e-22
Medtr3g067625.1 | F-box/LRR protein | LC | chr3:30222987-3022757... 99 2e-21
Medtr2g019060.1 | F-box/LRR protein, putative | LC | chr2:613387... 98 3e-21
Medtr3g067615.1 | F-box/LRR protein | LC | chr3:30201111-3020339... 97 3e-21
Medtr3g065590.1 | F-box/LRR protein | LC | chr3:29638565-2964017... 97 3e-21
Medtr3g067630.1 | F-box/LRR protein | LC | chr3:30230228-3023133... 89 1e-18
Medtr7g451730.1 | F-box/LRR protein | LC | chr7:17619325-1761820... 88 2e-18
Medtr7g047530.1 | F-box/LRR protein | LC | chr7:16644937-1664384... 88 2e-18
Medtr6g015890.1 | F-box/LRR protein | LC | chr6:5570201-5568006 ... 87 5e-18
Medtr3g067645.1 | F-box/LRR protein | HC | chr3:30238909-3024079... 87 5e-18
Medtr1g045100.1 | F-box/LRR protein | LC | chr1:16955861-1695474... 87 5e-18
Medtr3g067990.1 | F-box/LRR protein, putative | LC | chr3:306242... 87 6e-18
Medtr1g044795.1 | F-box/LRR protein | LC | chr1:16966376-1696531... 87 7e-18
Medtr6g015900.1 | F-box/LRR protein | LC | chr6:5574580-5573648 ... 86 7e-18
Medtr3g065620.1 | F-box/LRR protein, putative | LC | chr3:296488... 86 7e-18
Medtr8g091730.1 | F-box/LRR protein | LC | chr8:38284347-3828622... 83 6e-17
Medtr2g095850.1 | F-box/LRR protein | LC | chr2:40892691-4089095... 82 1e-16
Medtr5g036740.1 | F-box/LRR protein | LC | chr5:16053749-1605281... 81 3e-16
Medtr3g080360.1 | F-box/LRR protein | HC | chr3:36336952-3633584... 78 2e-15
Medtr5g027890.1 | F-box/LRR protein | LC | chr5:11634854-1163576... 73 6e-14
Medtr3g080330.1 | F-box/LRR protein, putative | LC | chr3:363282... 72 2e-13
Medtr8g006980.1 | F-box/LRR protein | LC | chr8:1153108-1152198 ... 70 4e-13
Medtr3g065820.1 | F-box/LRR protein | HC | chr3:29720975-2972212... 70 8e-13
Medtr3g065790.1 | F-box/LRR protein | LC | chr3:29712876-2971353... 67 7e-12
Medtr3g080320.1 | F-box/LRR protein, putative | LC | chr3:363261... 66 1e-11
Medtr3g065890.1 | F-box/LRR protein | HC | chr3:29751756-2975295... 66 1e-11
Medtr3g080280.1 | F-box/LRR protein | LC | chr3:36314064-3631307... 65 1e-11
Medtr3g080310.1 | F-box/LRR protein | LC | chr3:36321437-3632055... 65 2e-11
Medtr5g062080.1 | F-box/LRR protein | LC | chr5:25784472-2578371... 63 7e-11
Medtr3g065840.1 | F-box/LRR protein, putative | LC | chr3:297266... 62 1e-10
Medtr3g074900.1 | ubiquitin-protein ligase | HC | chr3:33833221-... 62 2e-10
Medtr8g040130.1 | F-box/LRR protein | LC | chr8:14934659-1493384... 61 3e-10
Medtr8g006990.1 | transmembrane protein, putative | LC | chr8:11... 60 5e-10
Medtr3g036480.1 | F-box/LRR protein, putative | LC | chr3:135463... 57 7e-09
Medtr5g098180.1 | ubiquitin-protein ligase | LC | chr5:43004019-... 57 7e-09
Medtr5g064480.1 | ubiquitin-protein ligase | HC | chr5:27070427-... 56 1e-08
Medtr5g064480.2 | ubiquitin-protein ligase | HC | chr5:27070606-... 56 1e-08
Medtr3g080340.1 | F-box/LRR protein, putative | LC | chr3:363334... 56 1e-08
Medtr4g073280.1 | RNI superfamily protein, putative | LC | chr4:... 55 2e-08
Medtr4g130620.1 | F-box SKIP1-like protein | HC | chr4:54425231-... 54 3e-08
Medtr3g065730.1 | F-box/LRR protein, putative | LC | chr3:296987... 54 4e-08
Medtr2g018970.1 | F-box-like protein, putative | LC | chr2:60603... 54 6e-08
Medtr3g080270.1 | F-box/LRR protein, putative | LC | chr3:363099... 53 8e-08
Medtr3g065850.1 | F-box/LRR protein | LC | chr3:29747139-2972992... 51 3e-07
Medtr3g065630.1 | hypothetical protein | HC | chr3:29652971-2965... 51 3e-07
Medtr2g018900.1 | F-box/LRR protein | LC | chr2:6037033-6038152 ... 50 4e-07
>Medtr2g018910.1 | F-box/LRR protein | HC | chr2:6040628-6044118 |
20130731
Length = 329
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 7 FECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLR 66
F CDD AF+IA+TMP L HLQL GN+++N+GL AILDGCP LESLD+R C N+ L GSL
Sbjct: 192 FVCDDVAFSIAETMPGLRHLQLFGNKMSNDGLRAILDGCPLLESLDIRQCFNLSLRGSLG 251
Query: 67 ERCLKQIKDLRLPEDLSEVSIYTEGGNEVESTDED 101
++C +QIKDLRLP D +E + + S DED
Sbjct: 252 KKCREQIKDLRLPYDATEDYPFQVIAYDYGSPDED 286
>Medtr2g018940.1 | F-box/LRR protein | HC | chr2:6045280-6047439 |
20130731
Length = 332
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 8 ECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRE 67
E DDEAF+IAKTMP L HL L+GN+++ +GL AILDGCPHLESLD+R C N+ L GSL +
Sbjct: 190 EFDDEAFSIAKTMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGK 249
Query: 68 RCLKQIKDLRLPEDLSE 84
RC +QIK LRLP D ++
Sbjct: 250 RCREQIKYLRLPYDATD 266
>Medtr2g018950.1 | F-box/LRR protein | HC | chr2:6051919-6054233 |
20130731
Length = 325
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 11 DEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCL 70
+EAFAIAK MP L HLQL+GN +TN+GL+A+LDGCPHLESLD+R C NV+L G+L +RC
Sbjct: 200 NEAFAIAKYMPGLRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCK 259
Query: 71 KQIKDLRLPEDLSE 84
+QIK RLP D ++
Sbjct: 260 EQIKYFRLPHDATD 273
>Medtr3g065610.1 | F-box/LRR protein | HC | chr3:29646510-29648087 |
20130731
Length = 307
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 5 KGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGS 64
KG++C+ EA AIAKTMP+L HL+L GN+LTN+GL+AILDGCP+LESLD+R+C N+ + G+
Sbjct: 187 KGYKCNKEALAIAKTMPELRHLELWGNKLTNDGLIAILDGCPYLESLDVRMCYNLVIHGN 246
Query: 65 LRERCLK--QIKDLRLPED 81
L +RC + +IK R P +
Sbjct: 247 LAKRCFENTRIKYFRYPTE 265
>Medtr3g067625.1 | F-box/LRR protein | LC | chr3:30222987-30227573 |
20130731
Length = 474
Score = 98.6 bits (244), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/75 (65%), Positives = 57/75 (76%)
Query: 5 KGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGS 64
K E +D+AFAIAKTMP+L HL + GN LTN GL AILDGCP LESL LR C+++DLSGS
Sbjct: 179 KDIELNDDAFAIAKTMPKLRHLSMFGNLLTNVGLHAILDGCPLLESLVLRDCNHLDLSGS 238
Query: 65 LRERCLKQIKDLRLP 79
+RC QIKD LP
Sbjct: 239 FGKRCRDQIKDFVLP 253
>Medtr2g019060.1 | F-box/LRR protein, putative | LC |
chr2:6133876-6132345 | 20130731
Length = 282
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 14/124 (11%)
Query: 8 ECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNV--DLSGSL 65
E DD+AFAIA+TMP L HLQL GN++TN+GLLAILDGC HLESLD+R C N+ +L S+
Sbjct: 167 EDDDDAFAIAQTMPGLRHLQLFGNKMTNDGLLAILDGCLHLESLDIRQCFNINFNLVASV 226
Query: 66 RERCLKQIKDLRLPEDLSEVSIYTEGGNEVE-STDEDYQIYLRDYVDIDWANERESTDED 124
+R ++Q+K LRLP D ++ + + + D D+ +Y +D++ +D+D
Sbjct: 227 GKRFIEQVKYLRLPYDATDDYPFQAAFDYASLAEDPDWFVY-QDFL----------SDDD 275
Query: 125 YQIY 128
Y+ Y
Sbjct: 276 YEYY 279
>Medtr3g067615.1 | F-box/LRR protein | LC | chr3:30201111-30203392 |
20130731
Length = 284
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 75/128 (58%), Gaps = 19/128 (14%)
Query: 5 KGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGS 64
K E +D+A AIAKTMP+L HL + GN LTN GL AILDGCP LES+ LR C ++DLSGS
Sbjct: 165 KDIELNDDAIAIAKTMPKLRHLSMFGNLLTNVGLHAILDGCPLLESVVLRNCFHLDLSGS 224
Query: 65 LRERCLKQIKDLRLPEDLSEVSIYTEGGNEVESTDEDYQIYLRDYVDIDWANERESTDED 124
L +RC QIKDL LP D+ E DEDY YL ++ + D D
Sbjct: 225 LGKRCRDQIKDLVLPTDVDE-----------NCDDEDY-FYLSSLME-------DEMDLD 265
Query: 125 YQIYLRDY 132
Y +L Y
Sbjct: 266 YLFFLNMY 273
>Medtr3g065590.1 | F-box/LRR protein | LC | chr3:29638565-29640179 |
20130731
Length = 315
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 5 KGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGS 64
KG++C+ EA AIAKTMP+L L+L GN+LTN+GL+AI DGCP+LESLD+R+C N+ + G+
Sbjct: 187 KGYKCNKEALAIAKTMPELRDLELWGNKLTNDGLIAIFDGCPYLESLDVRMCYNLVIHGN 246
Query: 65 LRERCLK--QIKDLRLPEDLSEVSIYTEGGNEVESTDEDYQIY 105
L +RC + ++K R P + Y G + + D Y+ Y
Sbjct: 247 LAKRCFENSRVKYFRYPNE------YINGYDNADDDDFVYEFY 283
>Medtr3g067630.1 | F-box/LRR protein | LC | chr3:30230228-30231330 |
20130731
Length = 328
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 5 KGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGS 64
K E +D+AFAIAKTM +L HL + GN LTN GL AILDGCP LES+ LR C ++DLSGS
Sbjct: 179 KDIELNDDAFAIAKTMTKLRHLSMFGNLLTNVGLHAILDGCPLLESIVLRDCIHLDLSGS 238
Query: 65 LRERCLKQIKDL 76
L +RC QIKD
Sbjct: 239 LGKRCCDQIKDF 250
>Medtr7g451730.1 | F-box/LRR protein | LC | chr7:17619325-17618205 |
20130731
Length = 229
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 11 DEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCL 70
++A AIAKTMP+L +L ++GN LTN+ LL ILD CP LE LDLR+C +DLSGSL++RC
Sbjct: 143 NDALAIAKTMPKLRYLSMIGNTLTNDELLVILDRCPLLEYLDLRICFRLDLSGSLKKRCR 202
Query: 71 KQIKDLRLPEDL 82
QIK L LP D+
Sbjct: 203 DQIKYLILPIDV 214
>Medtr7g047530.1 | F-box/LRR protein | LC | chr7:16644937-16643844 |
20130731
Length = 220
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 11 DEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCL 70
++A AIAKTMP+L +L ++GN LTN+ LL ILD CP LE LDLR+C +DLSGSL++RC
Sbjct: 134 NDALAIAKTMPKLRYLSMIGNTLTNDELLVILDRCPLLEYLDLRICFRLDLSGSLKKRCR 193
Query: 71 KQIKDLRLPEDL 82
QIK L LP D+
Sbjct: 194 DQIKYLILPIDV 205
>Medtr6g015890.1 | F-box/LRR protein | LC | chr6:5570201-5568006 |
20130731
Length = 303
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D EA IA TM L L + GN LTN GLLAILDGCP LESL + C ++DLSGSLR+RC
Sbjct: 190 DTEALIIA-TMSTLTRLDIKGNMLTNAGLLAILDGCPLLESLGIEECYHLDLSGSLRKRC 248
Query: 70 LKQIKDLRLP 79
L+QIKDLRLP
Sbjct: 249 LEQIKDLRLP 258
>Medtr3g067645.1 | F-box/LRR protein | HC | chr3:30238909-30240791 |
20130731
Length = 341
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 7 FECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLR 66
+CD++AFAIA TMP+L L + GN LTN GLL+ILD CP LE LDLR C N+DLSG L
Sbjct: 180 IKCDEDAFAIANTMPKLRLLMIFGNSLTNVGLLSILDACPLLEDLDLRECLNLDLSGRLG 239
Query: 67 ERCLKQIKDLRL 78
+RC QI LRL
Sbjct: 240 KRCQDQIIYLRL 251
>Medtr1g045100.1 | F-box/LRR protein | LC | chr1:16955861-16954746 |
20130731
Length = 285
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 11/92 (11%)
Query: 4 LKGFEC----------DDEAFAIAKTMPQLCHLQLLGNRLTNEGLL-AILDGCPHLESLD 52
LK EC DDE A+AKTMP+L HL++ N+L+++G+L AIL+GCP LESLD
Sbjct: 179 LKSLECHLTFDKEEISDDEFLAVAKTMPRLRHLKISRNKLSSDGILIAILNGCPLLESLD 238
Query: 53 LRVCSNVDLSGSLRERCLKQIKDLRLPEDLSE 84
L +C ++DLS SLR+RC QIKD +LP D +
Sbjct: 239 LGLCFSLDLSESLRKRCYDQIKDCKLPIDFHK 270
>Medtr3g067990.1 | F-box/LRR protein, putative | LC |
chr3:30624253-30621366 | 20130731
Length = 258
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 51/70 (72%)
Query: 7 FECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLR 66
F+CDDEAF IAKTMP L HL + GN L+ GLLAILDGCP LESLD+ C N+D +G+L
Sbjct: 171 FKCDDEAFIIAKTMPGLRHLDIHGNPLSEVGLLAILDGCPLLESLDIIGCYNLDFNGNLG 230
Query: 67 ERCLKQIKDL 76
ER QIK
Sbjct: 231 ERLRNQIKHF 240
>Medtr1g044795.1 | F-box/LRR protein | LC | chr1:16966376-16965316 |
20130731
Length = 287
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 4 LKGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSG 63
+K + DDE FAIAK+MP+L HL++ GN L+++G+LAIL+ C LESLDL +C +D S
Sbjct: 189 MKTGKSDDELFAIAKSMPRLRHLKIAGNNLSSDGVLAILNECSLLESLDLGLCFRLDWSE 248
Query: 64 SLRERCLKQIKDLRLPED 81
LR+RC QIKD +LP D
Sbjct: 249 RLRKRCYDQIKDFKLPVD 266
>Medtr6g015900.1 | F-box/LRR protein | LC | chr6:5574580-5573648 |
20130731
Length = 280
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D EA IA TM L L + GN LTN GLLAILDGCP LESL + C ++DLSGSLR+RC
Sbjct: 187 DTEALIIA-TMSTLTRLDIKGNMLTNAGLLAILDGCPLLESLGIEECYHLDLSGSLRKRC 245
Query: 70 LKQIKDLRLP 79
L+QIKDLRLP
Sbjct: 246 LEQIKDLRLP 255
>Medtr3g065620.1 | F-box/LRR protein, putative | LC |
chr3:29648851-29649911 | 20130731
Length = 273
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 57/84 (67%)
Query: 9 CDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRER 68
CDDEA A+ KTM +L H+++ N LTN+GLLAILDG P LESLDL C N DLS L +
Sbjct: 177 CDDEAIAVGKTMTKLRHIKIYENLLTNDGLLAILDGSPLLESLDLSGCLNFDLSEHLVKW 236
Query: 69 CLKQIKDLRLPEDLSEVSIYTEGG 92
C ++IKDLR P + + Y +G
Sbjct: 237 CHEKIKDLRFPFNYIDYYFYDDGS 260
>Medtr8g091730.1 | F-box/LRR protein | LC | chr8:38284347-38286223 |
20130731
Length = 308
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%)
Query: 11 DEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCL 70
DEAF IAKTMP L HL + N LT++GLLAILDGCP LESL++ C N+D GSL ER
Sbjct: 196 DEAFIIAKTMPGLRHLDIHKNPLTDDGLLAILDGCPLLESLNIAGCYNLDFDGSLWERLH 255
Query: 71 KQIKDLRLPE 80
IKDL L E
Sbjct: 256 NHIKDLHLRE 265
>Medtr2g095850.1 | F-box/LRR protein | LC | chr2:40892691-40890950 |
20130731
Length = 197
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 50/70 (71%)
Query: 7 FECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLR 66
F CDD+AF IAK M L HL L G+ L++ GLLAILDGCP LESLD+ C N+D GSL
Sbjct: 127 FTCDDKAFIIAKKMHGLLHLVLHGDPLSDVGLLAILDGCPRLESLDIFGCYNLDFEGSLW 186
Query: 67 ERCLKQIKDL 76
+R QIKDL
Sbjct: 187 KRLHTQIKDL 196
>Medtr5g036740.1 | F-box/LRR protein | LC | chr5:16053749-16052817 |
20130731
Length = 281
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
DD A IA TM LC+L + G+ LTN+GLLAILD CP LESLDL+ C ++LS SL +RC
Sbjct: 186 DDLALVIADTMTNLCYLDIKGDNLTNDGLLAILDKCPFLESLDLQGCRYLELSKSLEKRC 245
Query: 70 LKQIKDLRLP 79
+ I LRLP
Sbjct: 246 IDPINHLRLP 255
>Medtr3g080360.1 | F-box/LRR protein | HC | chr3:36336952-36335849 |
20130731
Length = 285
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D AF IA+TMP LCHL + G++LT G+LAI+D CP LE LD+ C N L+ L++RC
Sbjct: 205 DKMAFLIAETMPGLCHLDMRGHKLTELGVLAIIDKCPLLEYLDISFCLN--LNEDLKKRC 262
Query: 70 LKQIKDLRLPEDLSEVSIYTEG 91
+ QIKDL+LP + + ++ +G
Sbjct: 263 IDQIKDLQLPYVIRKGALTRKG 284
>Medtr5g027890.1 | F-box/LRR protein | LC | chr5:11634854-11635769 |
20130731
Length = 263
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D +A I++TM +L L L GNRLT+ GLLAIL+GCP LESL + C +++LS L ERC
Sbjct: 184 DGDALIISETMSRLRRLHLDGNRLTDIGLLAILNGCPLLESLYIGGCYHLELSQGLEERC 243
Query: 70 LKQIKDLRL 78
L+QIKD+RL
Sbjct: 244 LEQIKDVRL 252
>Medtr3g080330.1 | F-box/LRR protein, putative | LC |
chr3:36328269-36327390 | 20130731
Length = 261
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D AF IA+TMP L HL L G+ LT G+LAI+D CP LESLD+ C L+ L++RC
Sbjct: 178 DKMAFVIAETMPGLRHLDLKGHELTELGVLAIIDSCPLLESLDISDCHY--LTEDLKKRC 235
Query: 70 LKQIKDLRLP 79
+ QIKDL+LP
Sbjct: 236 IDQIKDLQLP 245
>Medtr8g006980.1 | F-box/LRR protein | LC | chr8:1153108-1152198 |
20130731
Length = 271
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 49/71 (69%)
Query: 7 FECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLR 66
++ +D AFAIAKTM L HL+L G L + LLAILD CP LESLDL C LS SL+
Sbjct: 187 YKYNDVAFAIAKTMSGLRHLKLSGIWLKSVELLAILDDCPLLESLDLLGCLCASLSPSLK 246
Query: 67 ERCLKQIKDLR 77
RC +QI+DLR
Sbjct: 247 RRCCEQIEDLR 257
>Medtr3g065820.1 | F-box/LRR protein | HC | chr3:29720975-29722128 |
20130731
Length = 314
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 62/78 (79%)
Query: 9 CDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRER 68
CD +AF +A+TM L HL+LL N LTN+GLLAILDGCP LESLDLR C ++DLSGS+ +R
Sbjct: 188 CDQQAFDVARTMSGLRHLKLLNNNLTNDGLLAILDGCPLLESLDLRGCFHLDLSGSIGKR 247
Query: 69 CLKQIKDLRLPEDLSEVS 86
C +Q+K+L LP D +VS
Sbjct: 248 CKQQVKNLCLPTDFMDVS 265
>Medtr3g065790.1 | F-box/LRR protein | LC | chr3:29712876-29713532 |
20130731
Length = 176
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
DD+AF IAKTM LCHL+L G GL+AILDGCP LESL+LR S L +R
Sbjct: 104 DDKAFVIAKTMSGLCHLKLNGFFSNCGGLVAILDGCPLLESLNLRGYRCSKFSPGLEKRF 163
Query: 70 LKQIKDLRL 78
++IKDL+L
Sbjct: 164 REKIKDLQL 172
>Medtr3g080320.1 | F-box/LRR protein, putative | LC |
chr3:36326160-36325532 | 20130731
Length = 188
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 8 ECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRE 67
E D AF IA+TMP LCHL + G++L+ +LAI+D CP LESLD+ VC ++ L +
Sbjct: 105 ESDKMAFVIAETMPGLCHLDMKGHKLSELRVLAIIDKCPLLESLDISVCLSLYEDEDLHK 164
Query: 68 RCLKQIKDLRL 78
C+ +I DL+L
Sbjct: 165 SCIDKINDLQL 175
>Medtr3g065890.1 | F-box/LRR protein | HC | chr3:29751756-29752959 |
20130731
Length = 238
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 41/59 (69%)
Query: 11 DEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
DEAF IAKTM L HL+LLG L + LLAILDGCP LESLDLR C + SL +RC
Sbjct: 157 DEAFCIAKTMSGLRHLKLLGLWLNYDELLAILDGCPLLESLDLRFCIYYSSNQSLLKRC 215
>Medtr3g080280.1 | F-box/LRR protein | LC | chr3:36314064-36313079 |
20130731
Length = 293
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D A IA+TMP L HL + G++LT G+LAI+D CP LESLD+R C L+ L + C
Sbjct: 187 DKTALVIAETMPGLRHLDMKGHKLTELGVLAIIDKCPLLESLDIRDCHY--LNEGLEKSC 244
Query: 70 LKQIKDLRLP 79
+ QI DL +P
Sbjct: 245 IDQINDLHMP 254
>Medtr3g080310.1 | F-box/LRR protein | LC | chr3:36321437-36320558 |
20130731
Length = 258
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 8 ECDDE--AFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSL 65
C+ E A AIA+TMP LCHL + G+ L+ G+ AI+D CP LESLD+ C LS L
Sbjct: 175 SCNPEKMALAIAETMPGLCHLDMKGHNLSELGVRAIIDKCPVLESLDISDCHY--LSEDL 232
Query: 66 RERCLKQIKDLRL 78
+RC+ QIKDL+L
Sbjct: 233 TKRCIDQIKDLQL 245
>Medtr5g062080.1 | F-box/LRR protein | LC | chr5:25784472-25783713 |
20130731
Length = 234
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 13 AFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCLKQ 72
AF++A+TM L L++ N LT +G+LAILDGCP LE LD++ C + LS SL + C ++
Sbjct: 129 AFSVAETMSGLRRLKISSNVLTTDGVLAILDGCPLLECLDIQECRYLFLSFSLEKMCHER 188
Query: 73 IKD-LRLPE 80
IK+ RLP+
Sbjct: 189 IKEYFRLPD 197
>Medtr3g065840.1 | F-box/LRR protein, putative | LC |
chr3:29726620-29727468 | 20130731
Length = 224
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 13 AFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCLKQ 72
+FAIAKTMP+L HL++ G+ ++G+ AILDGC LES DL C S SL +RC +Q
Sbjct: 126 SFAIAKTMPRLLHLKISGDMPGDDGIQAILDGCHLLESFDLGGCYAYYYSQSLEKRCREQ 185
Query: 73 IKDLRLP 79
I P
Sbjct: 186 INFFVPP 192
>Medtr3g074900.1 | ubiquitin-protein ligase | HC |
chr3:33833221-33835627 | 20130731
Length = 316
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDL 61
DDEA+AIA TMP+L HL++ +R++ G++ IL CP LE LDLR C V+L
Sbjct: 177 DDEAYAIATTMPKLKHLEMAYHRISTSGVVQILSNCPKLEFLDLRGCWGVNL 228
>Medtr8g040130.1 | F-box/LRR protein | LC | chr8:14934659-14933846 |
20130731
Length = 223
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 4 LKGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVD 60
L E +D AF IAK MP L +L++ + LTN+ +LAILDGCP LE+LDLR C V+
Sbjct: 161 LDNIEMNDAAFGIAKIMPGLHYLKMSLDELTNDDVLAILDGCPLLETLDLRACKYVE 217
>Medtr8g006990.1 | transmembrane protein, putative | LC |
chr8:1157480-1157055 | 20130731
Length = 105
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 20 MPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCLKQIKDLRLP 79
M L +LLG L + G LAILDGCP LE LDL VC++ LS +L +RC +QIKDLR P
Sbjct: 1 MSGLHRFKLLGIFLVSVGFLAILDGCPLLEFLDLHVCAS--LSQNLEQRCHEQIKDLRPP 58
Query: 80 EDL 82
+
Sbjct: 59 KHF 61
>Medtr3g036480.1 | F-box/LRR protein, putative | LC |
chr3:13546360-13547039 | 20130731
Length = 211
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 37 GLLAILDGCPHLESLDLRVCSNVDLSGSLRERCLKQIKDLRLPEDLSEV 85
GLLAILDGCP LESL+L C N+ S +L +RC +QIK+L L D SE+
Sbjct: 133 GLLAILDGCPRLESLNLSGCFNLKFSENLEKRCREQIKELVLVPDASEL 181
>Medtr5g098180.1 | ubiquitin-protein ligase | LC |
chr5:43004019-43003148 | 20130731
Length = 252
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 5 KGFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDL 61
K FE D +A+AIA TM +L L+++ + +TNEG+L I+ CP LE LDLR C V L
Sbjct: 153 KPFE-DAKAYAIASTMSKLKRLEIVYHLITNEGVLKIISSCPKLECLDLRGCWGVKL 208
>Medtr5g064480.1 | ubiquitin-protein ligase | HC |
chr5:27070427-27073110 | 20130731
Length = 316
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDL 61
D EA AIA TMP+L L++ N +T+EG+ IL CP LE LDLR C V L
Sbjct: 177 DAEALAIASTMPKLKRLEMAYNLVTSEGVYKILSSCPKLEILDLRGCWGVKL 228
>Medtr5g064480.2 | ubiquitin-protein ligase | HC |
chr5:27070606-27073085 | 20130731
Length = 316
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDL 61
D EA AIA TMP+L L++ N +T+EG+ IL CP LE LDLR C V L
Sbjct: 177 DAEALAIASTMPKLKRLEMAYNLVTSEGVYKILSSCPKLEILDLRGCWGVKL 228
>Medtr3g080340.1 | F-box/LRR protein, putative | LC |
chr3:36333463-36333290 | 20130731
Length = 57
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 13 AFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVC 56
A AIA+TMP LCHL + G++LT G+LAI+D P LESLD+R C
Sbjct: 2 ALAIAETMPGLCHLDMKGHKLTQLGVLAIIDKGPLLESLDIRDC 45
>Medtr4g073280.1 | RNI superfamily protein, putative | LC |
chr4:27718296-27718604 | 20130731
Length = 88
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 15/64 (23%)
Query: 6 GFECDDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSL 65
G CDD+ FAIAKTM GL+AILD CP LESLDLR C N++ SG
Sbjct: 3 GDSCDDDGFAIAKTMS---------------GLVAILDRCPLLESLDLRGCFNLNWSGFS 47
Query: 66 RERC 69
+RC
Sbjct: 48 WKRC 51
>Medtr4g130620.1 | F-box SKIP1-like protein | HC |
chr4:54425231-54427158 | 20130731
Length = 302
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNV---DLSGSLR 66
D EA AIA +MP L L++ ++LT +GL +I GCP+LE LDL C+N+ D++ +
Sbjct: 201 DSEAAAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSGCANLTSRDIAKA-- 258
Query: 67 ERCLKQIKDLRLPEDLSEVSIY-TEGGNEVESTDEDYQ 103
L +KD++ P S++ TE DE +Q
Sbjct: 259 SSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQ 296
>Medtr3g065730.1 | F-box/LRR protein, putative | LC |
chr3:29698778-29699862 | 20130731
Length = 247
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 11 DEAFAIAKTMPQLCHLQLLG-NRLTNEGLLAILDGCPHLESLDLR 54
D AF++ KTMP L HL G + L + GLLAIL+GCP LESLDLR
Sbjct: 163 DAAFSVGKTMPGLRHLSFSGIHFLDDNGLLAILNGCPLLESLDLR 207
>Medtr2g018970.1 | F-box-like protein, putative | LC |
chr2:6060349-6060987 | 20130731
Length = 132
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 22 QLCHLQLLGNRL-------TNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCLKQIK 74
L HL L + L TN+GLLA LD CPHLESLD+ + NV+L G +RC +QIK
Sbjct: 13 SLSHLDLKRDHLVAHDPTETNDGLLA-LDSCPHLESLDICLRLNVNLIGISEKRCKEQIK 71
Query: 75 DLRLPEDLSEVSIYTEGGNEVESTDEDY 102
L LP D S+ + + + S DEDY
Sbjct: 72 YLLLPYDPSDDYSF-QAECDYGSPDEDY 98
>Medtr3g080270.1 | F-box/LRR protein, putative | LC |
chr3:36309926-36308982 | 20130731
Length = 242
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 15/70 (21%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERC 69
D A IA+TM LCHL L G+ LTN GL AIL CP LE SL++RC
Sbjct: 158 DRVALVIAETMSCLCHLGLSGHELTNVGLHAILVKCP-LE--------------SLKKRC 202
Query: 70 LKQIKDLRLP 79
+ QI DL+LP
Sbjct: 203 IDQINDLQLP 212
>Medtr3g065850.1 | F-box/LRR protein | LC | chr3:29747139-29729925 |
20130731
Length = 263
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 11 DEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRE 67
DEA A AKTM L HL+L G + G LAILDGC HLES DL+ S L G E
Sbjct: 187 DEALAFAKTMTGLRHLKLNGIYVNYVGFLAILDGCHHLESFDLQ--SPTSLVGKCNE 241
>Medtr3g065630.1 | hypothetical protein | HC |
chr3:29652971-29653652 | 20130731
Length = 129
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 14 FAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLRVCSNVDLSGSLRERCLKQI 73
++A + +L H + + G LAILD CP LESLD+ NV LS +LRERC +QI
Sbjct: 41 LSVADPVYRLSHFYMKDYDRSEVGWLAILDRCPLLESLDI-TGGNVYLSENLRERCREQI 99
Query: 74 KDLRLP 79
K L LP
Sbjct: 100 KILHLP 105
>Medtr2g018900.1 | F-box/LRR protein | LC | chr2:6037033-6038152 |
20130731
Length = 202
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 10 DDEAFAIAKTMPQLCHLQLLGNRLTNEGLLAILDGCPHLESLDLR 54
D+EAF I M LQL + +TN+GLLAILDGCPHLE L +R
Sbjct: 154 DEEAFDIELNMHGFRRLQLFRDEITNKGLLAILDGCPHLEYLYMR 198