Miyakogusa Predicted Gene

Lj6g3v0410520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0410520.1 Non Characterized Hit- tr|I1LMB5|I1LMB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40978
PE,81.27,0,seg,NULL; ARM repeat,Armadillo-type fold; coiled-coil,NULL;
no description,Armadillo-like helical; C,CUFF.57805.1
         (1044 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g065300.1 | chromosome condensation-like protein | HC | ch...  1443   0.0  

>Medtr3g065300.1 | chromosome condensation-like protein | HC |
           chr3:29474875-29483914 | 20130731
          Length = 1030

 Score = 1443 bits (3736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/953 (76%), Positives = 780/953 (81%), Gaps = 19/953 (1%)

Query: 1   MED---DQETRLSQKIAAILDDARTSLATHNRKLKELTLLRXXXXXXXXXXXXXXXXLTP 57
           MED   D E RLSQKIA+ILD+ R S ATHNRKLKEL+LLR                L P
Sbjct: 1   MEDTNTDHENRLSQKIASILDEIRISYATHNRKLKELSLLRSKSTSPSHFFSAFSKSLIP 60

Query: 58  LFNFQRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXNKTARFRAC 117
           LFNF RRL                                     V     +KT RFRAC
Sbjct: 61  LFNFHRRLASADRVMPKFAMSFWIISFIFWL--------------VAATAADKTVRFRAC 106

Query: 118 QIVSEIILWLPDDAEVSNDLWDEVIDCMMVRMRDKIPVVRTFAIRALSRFVNDTSNSDIX 177
           QIVSEIIL LPDDAEVSNDLWDEVI+CM VR+RDKI VVRTFA+RAL+RFVND+SN DI 
Sbjct: 107 QIVSEIILRLPDDAEVSNDLWDEVIECMKVRVRDKIHVVRTFAVRALARFVNDSSNVDIL 166

Query: 178 XXXXXXXXXEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLHS 237
                    EQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPL S
Sbjct: 167 DLFLEMLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQS 226

Query: 238 LSIKLRTVILRSGLADRSVAVSKECFKLLKDEWLIKCCNGDPLQLLKYLDVETYESVSES 297
           LSIKLRT+ILR GLADRS  VSKECFKLLKDEWLIKCCNGDPL+LLKYLDVETYESVSES
Sbjct: 227 LSIKLRTIILRRGLADRSAGVSKECFKLLKDEWLIKCCNGDPLELLKYLDVETYESVSES 286

Query: 298 VMEALLKAGLVKLQNGASIQQYISSNGDTAEGDSVDCQPSIELMEAEAALYWRTVCKHLQ 357
           VMEALLKAGLVKL+NGASIQQ+I+SN DTAEG+ V C PSI LMEAEAALYWRTVCKHLQ
Sbjct: 287 VMEALLKAGLVKLKNGASIQQHITSNSDTAEGEGVHCPPSIILMEAEAALYWRTVCKHLQ 346

Query: 358 SIAQAMGSDAAATTGTEAEVYAAEATDTNDLLEKILPATVDEYIELIRAHINAGSNHRFA 417
           S A A+GSDAAAT GTEAEVYAAEA+D NDLLEKILPA+VDEYIEL+RAHI AG NHRFA
Sbjct: 347 SEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPASVDEYIELVRAHIVAGPNHRFA 406

Query: 418 SRQLLLLGAMFDFSDATNRKTASAFLQELMRKPPEHEIDNEGNVVVIGDGLSFGGDNDWA 477
            RQLLLLGAMFDFSD + RK AS FLQELM KPPEHE+DNEGNVVVIGDGLS GGD DWA
Sbjct: 407 CRQLLLLGAMFDFSDTSYRKAASVFLQELMSKPPEHEVDNEGNVVVIGDGLSLGGDTDWA 466

Query: 478 EAVARLARKVHGASGXXXXXXXXXXXXXXQPCRERTADYVQWMHSLSLSGLLLKNAVSLR 537
           EA+A+LA+KVH A G              QPCRERTAD VQW+H+LSL GLLLKNA S+R
Sbjct: 467 EAIAKLAKKVHAAPGEFEEIVLAIIEKLAQPCRERTADCVQWIHTLSLIGLLLKNAASMR 526

Query: 538 FLQGKAIGADDLLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPSAELLKQLRTSYIQ 597
           FLQGKAI  ++LLQSLLLPG KQSHLDVQRIAVRCLGLFGLLERKP+AELLKQLRTSYI+
Sbjct: 527 FLQGKAIEPEELLQSLLLPGVKQSHLDVQRIAVRCLGLFGLLERKPNAELLKQLRTSYIK 586

Query: 598 GPHSISIEASKALIDLVMWHGPQEVDRVLKHTIPGQINCDKKSFCPVNFSDLEGD--LNV 655
           GPH ISIEA KALIDLVMWHGPQEVDRVL H IP Q+NCDKK F PVNFSD EGD   NV
Sbjct: 587 GPHLISIEAGKALIDLVMWHGPQEVDRVLSHDIPSQVNCDKKCFVPVNFSDSEGDSNSNV 646

Query: 656 ETLDILYGGFENDDWVSPSTSNDDECINAVLGEGFAKILLLSDNYPSIHASLHPVLLSKI 715
           + LD+LYGGFEN+DW +P TSN+DECI AVLGEGFAKILLLSDNYPSI ASLHPVLLSK+
Sbjct: 647 DILDLLYGGFENEDWANPLTSNEDECIYAVLGEGFAKILLLSDNYPSISASLHPVLLSKL 706

Query: 716 IYLYFSDVSEHLYRLKQCLSVFFEHYPCLSVNHKRCISKAFIPVMRSMWPGIXXXXXXXX 775
           IYLYFSDVSE+++RLKQCLSVFFEHYPCLS NHKRCI KAFIP MRSMWPGI        
Sbjct: 707 IYLYFSDVSENMHRLKQCLSVFFEHYPCLSTNHKRCILKAFIPAMRSMWPGIFGNSGGSP 766

Query: 776 XXXXQMRKRAVQASRFMLQMLQIPLYIKETQPESENTNTEQPQVIDSCAEVPFECGEEGL 835
               QMRKRAVQASRFMLQM+QIPL++KET+  SEN+ TE PQVIDS AEVPFECGEEGL
Sbjct: 767 FMVSQMRKRAVQASRFMLQMVQIPLFVKETEAVSENSGTEHPQVIDSIAEVPFECGEEGL 826

Query: 836 ALRIAIEVASFHSKKTAAEKSYVSALCRILVLLHFRLSEQGPIKIMRKLLCRMVQCVSSE 895
           ALRIAIEV SFHSKK AAEK+YVSALC+ILV LHFRLSEQGPIKIMRKLLCRM +CVSSE
Sbjct: 827 ALRIAIEVTSFHSKKVAAEKAYVSALCKILVSLHFRLSEQGPIKIMRKLLCRMAECVSSE 886

Query: 896 KDLVKELTRMADHLITVDRQPDQDLLQDEVNLILGKLEIDFNLDLDSSATIPQ 948
           KDLVKEL RMADHL+T+DRQ DQ+LLQDEVNLILGKLE+DFNLDLD S  +PQ
Sbjct: 887 KDLVKELKRMADHLMTIDRQQDQELLQDEVNLILGKLELDFNLDLDVSVAMPQ 939