Miyakogusa Predicted Gene

Lj6g3v0409410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0409410.1 Non Characterized Hit- tr|I1LMA5|I1LMA5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44872
PE,91.57,0,seg,NULL; NADH-ubiquinone oxidoreductase-G
iron,NADH:ubiquinone oxidoreductase, subunit G, iron-sulp,CUFF.57895.1
         (745 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g065130.1 | NADH-ubiquinone oxidoreductase 75 kDa subunit ...  1342   0.0  

>Medtr3g065130.1 | NADH-ubiquinone oxidoreductase 75 kDa subunit |
           HC | chr3:29374273-29381206 | 20130731
          Length = 739

 Score = 1342 bits (3474), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 650/746 (87%), Positives = 680/746 (91%), Gaps = 8/746 (1%)

Query: 1   MGFGLLASRAMRPTSRLLNFHNPSSFFLRTIVSKPELRNXXXXXXXXXXX-XVDLPPRTP 59
           MG GLLAS+ +RPT+  L         LR+I +KPELR              VDL PRTP
Sbjct: 1   MGLGLLASKTLRPTTTRL-------LLLRSITTKPELRKPEPAAQPQPEQPLVDLTPRTP 53

Query: 60  VAGARVHFSNPDDAIEVFVDGYPVKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRM 119
           VAGARVHF+NPDDAIEVFVDGYPVKIPKGF+VLQACEVAGVDIPRFCYHSRLSIAGNCRM
Sbjct: 54  VAGARVHFTNPDDAIEVFVDGYPVKIPKGFSVLQACEVAGVDIPRFCYHSRLSIAGNCRM 113

Query: 120 CLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGEC 179
           CLVEVEKSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGEC
Sbjct: 114 CLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGEC 173

Query: 180 DLQDQSMAFGADRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGM 239
           DLQDQSMAFG+DRGRFT+MKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGM
Sbjct: 174 DLQDQSMAFGSDRGRFTDMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGM 233

Query: 240 LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAV 299
           LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELK TE+IDVTDAV
Sbjct: 234 LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKNTETIDVTDAV 293

Query: 300 GSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKPV 359
           GSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKPV
Sbjct: 294 GSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKPV 353

Query: 360 NWRDALAVVAEIAHQVKPEEIVGISGKLSDAESMIALKDFLNRIGSNNVWCEGIGANTNA 419
           NWR+AL++VAE+AHQVKPEEIVGISGKLSDAESMI LKDFLNR+GSNNVW EGIG NTNA
Sbjct: 354 NWREALSLVAEVAHQVKPEEIVGISGKLSDAESMIVLKDFLNRLGSNNVWGEGIGVNTNA 413

Query: 420 DFRSGYIMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIGKTVRSNQAKVGYIGPATDFN 479
           DFRSGYIMNTSIAGLEKAD FLLVGTQPRVEAAMVNARI KTV +N AKVGYIGPATDFN
Sbjct: 414 DFRSGYIMNTSIAGLEKADAFLLVGTQPRVEAAMVNARIRKTVTANHAKVGYIGPATDFN 473

Query: 480 YDHKHLGTGPQTLLEIAEGRHPFSKTISNAKHPVVIVGGGIFERKDQDAIFAAVETIAKQ 539
           YD++HLGTGPQTLLEIAEGRHPFSKTISNAK+PV+IVG GIFERKDQDAIFAAVETIAKQ
Sbjct: 474 YDNEHLGTGPQTLLEIAEGRHPFSKTISNAKNPVIIVGAGIFERKDQDAIFAAVETIAKQ 533

Query: 540 GNVVRSDWNGXXXXXXXXXXXXXXXXXXVPQSEKSLESAKFVYLMGADDVDLEKIPGDAF 599
           GNVVRSDWNG                  VPQSEKSLESAKFVYLMGADD +L+KIP DAF
Sbjct: 534 GNVVRSDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDTNLDKIPKDAF 593

Query: 600 VVYQGHHGDKSVYRANVILPAAAFSEKEGTYENTEGCTQQTLPAVPTVGDSRDDWKIVRA 659
           VVYQGHHGDKSVYRANVILPAAAFSEKEGTYENTEGCTQQT PAVPTVGDSRDDWKI+RA
Sbjct: 594 VVYQGHHGDKSVYRANVILPAAAFSEKEGTYENTEGCTQQTWPAVPTVGDSRDDWKIIRA 653

Query: 660 LSEVAGVRLPYDTVSGVRARMRTVAPNLVHVDEREPATLPSSLRPTFTQKMDTTPFGTVV 719
           LSE+AGVRLPYDT+ GVRAR+RTVAPNL  +DEREPA LPSSLRPTFT+K+D TPFG  V
Sbjct: 654 LSEIAGVRLPYDTIGGVRARLRTVAPNLAQMDEREPAALPSSLRPTFTKKVDPTPFGIAV 713

Query: 720 ENFYMTDAITRASKIMAQCSATLLKK 745
           ENFYMTDAITRASKIMAQCSATLLKK
Sbjct: 714 ENFYMTDAITRASKIMAQCSATLLKK 739