Miyakogusa Predicted Gene

Lj6g3v0409400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0409400.1 Non Characterized Hit- tr|I3SET8|I3SET8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.28,0,Mss4-like,Mss4-like; no description,Glutathione-dependent
formaldehyde-activating enzyme/centromere ,CUFF.57785.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g065140.1 | carbon-sulfur lyase | HC | chr3:29382159-29381...   247   3e-66

>Medtr3g065140.1 | carbon-sulfur lyase | HC | chr3:29382159-29381746
           | 20130731
          Length = 137

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 115/136 (84%), Positives = 122/136 (89%)

Query: 4   ETETVVHNGGCHCKSVRWKVLAPSSVVAWDCNCSNCYMRANNHFVVPAENFELLGDSGKF 63
           E E VVH GGCHCKSVRWKV APSSVV WDCNCSNCYMRAN HFVVPA+ FELLGDS +F
Sbjct: 2   EAERVVHTGGCHCKSVRWKVAAPSSVVVWDCNCSNCYMRANAHFVVPADKFELLGDSAEF 61

Query: 64  ITTYTFGTHTAKHTFCKICGITSFYYPRSNPDGVAVSFRCVDPGTLTHIEIRHFDGKNWE 123
           ITTYTFG+HTAKHTFCKICGITSFYYPRSNPDGVAVSFRCVD GTL H+EI+HFDGKNWE
Sbjct: 62  ITTYTFGSHTAKHTFCKICGITSFYYPRSNPDGVAVSFRCVDSGTLRHVEIKHFDGKNWE 121

Query: 124 SSYNQTGIASWSKVQK 139
            SYN+T I+S SK QK
Sbjct: 122 RSYNETNISSCSKEQK 137