Miyakogusa Predicted Gene

Lj6g3v0405290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0405290.1 Non Characterized Hit- tr|F6HI02|F6HI02_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,36.05,7e-18,no
description,Armadillo-like helical; IMPORTIN-5 (IMPORTIN SUBUNIT
BETA-3),NULL; IMPORTIN BETA,NULL,gene.g64131.t1.1
         (431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064910.1 | importin beta-3, putative | LC | chr3:29281629...   447   e-125
Medtr7g085820.1 | importin beta-3, putative | HC | chr7:33289119...   147   2e-35
Medtr8g085950.1 | importin beta-3, putative | HC | chr8:35654200...   139   6e-33
Medtr3g064980.1 | importin-like protein | LC | chr3:29322635-293...    93   4e-19
Medtr8g099855.1 | ARM repeat protein | HC | chr8:42284444-422859...    88   1e-17
Medtr3g064935.1 | HEAT repeat protein | LC | chr3:29298968-29297...    87   4e-17

>Medtr3g064910.1 | importin beta-3, putative | LC |
           chr3:29281629-29276314 | 20130731
          Length = 762

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/490 (50%), Positives = 305/490 (62%), Gaps = 69/490 (14%)

Query: 1   MVSREPILLRPYMCDMVLDALQIAE-SGVARGTRRLVIGMVVSMAEVRECEMVLPSLLDQ 59
           +VS EP+L++PYM DMVLDALQIAE SGV+  T RL   +V++M E++ECE +L SL  +
Sbjct: 266 LVSAEPLLVKPYMSDMVLDALQIAENSGVSDETHRLAFELVLAMTELKECEQMLMSLPHE 325

Query: 60  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKG---------------LEKV 104
           T                                     + G               L+K+
Sbjct: 326 TLVRLFIIPMKSLVLSVKEDGNGAGFGDCGSEEEKRKGVDGENEKVDDVYEFGIKCLKKL 385

Query: 105 CAAVGGIRTVAVVRELLPP-YLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEEVVN 163
           C A GG + +AV  ELL   YLD+A+WK RHAGI +L VI+K FSDEMV+M+NFL E+V 
Sbjct: 386 CVAFGGDKVLAVAHELLTKYYLDSADWKMRHAGITLLTVISKEFSDEMVLMDNFLGEMVT 445

Query: 164 RVLKVLQDPQVQVRLAAFNLMQMPTNFAQALQILYAQRFGHAFSIALVHEEESNVKEEAA 223
           + LK+ QD  VQVRLAAF LM+MP NF QA Q+LY  RF HAFSIAL  +E++ VKE+AA
Sbjct: 446 KTLKLFQDSHVQVRLAAFTLMEMPINFVQAAQLLYHHRFMHAFSIALGSDEDNKVKEQAA 505

Query: 224 IAMLFFLKNTLPESLTLFKSADTAMANLLSLIK--------------------------- 256
            AMLFFLKNTLP+SL L++ AD  M  LLS+I+                           
Sbjct: 506 SAMLFFLKNTLPDSLALYEYADILMKKLLSMIQDKRSAKQRRIALLTFNIVVQRCNQVAH 565

Query: 257 -----------------------EGARGIRIYAELGTPKLKPYIHRLISELIMLIKDPNR 293
                                  E ARGIRI AE GTP  KP+I+ ++SEL +LIKDPNR
Sbjct: 566 KYFAIYLPNLVEACSDKDSEIKEEAARGIRICAEFGTPTFKPFINMILSELNILIKDPNR 625

Query: 294 PVSENSKAQDIAVSAIGRICEFHRECIDGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMV 353
             SEN+KA DIAVSAIGRICEFHR+CIDGS  +PAWLSFLPLK DL+EAK+MHEQL  MV
Sbjct: 626 --SENAKACDIAVSAIGRICEFHRDCIDGSMFIPAWLSFLPLKEDLVEAKIMHEQLCSMV 683

Query: 354 SRFDKDLFGPANQNLEKIITVFIQVIEEGGNLATPETINQMNDLLTELARHIPQSALDSI 413
           +R D+DL G  NQNL KII V ++VIE+G  LAT +TINQMN+LL +  + IP SA + I
Sbjct: 684 ARLDRDLLGAGNQNLVKIIAVLLEVIEKGDKLATAQTINQMNNLLRQFGKTIPPSAFEKI 743

Query: 414 LVSLSAQQRD 423
           L+SLSAQQR+
Sbjct: 744 LMSLSAQQRE 753


>Medtr7g085820.1 | importin beta-3, putative | HC |
            chr7:33289119-33278903 | 20130731
          Length = 1118

 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 107/162 (66%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP +   +S L  +I  PN   S+N  A D AVSA+G+IC+FHR+ I
Sbjct: 948  GVGVCAEFGGSVFKPLVGEALSRLNAVITHPNAQHSDNVMAYDNAVSALGKICQFHRDSI 1007

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            + +Q+VPAWLS LP+K DLIEAK++H+ L  MV R DK+L G  NQ L KI+ +F +++ 
Sbjct: 1008 NAAQVVPAWLSCLPIKGDLIEAKVVHDLLCSMVERSDKELIGHNNQYLSKIVAIFAEILC 1067

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVSLSAQQR 422
             G +LAT +T+++M +LL +L + +P S L S   SL  QQ+
Sbjct: 1068 AGTDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLHPQQQ 1109



 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 121/269 (44%), Gaps = 12/269 (4%)

Query: 1   MVSREPILLRPYMCDMVLDALQIAES-GVARGTRRLVIGMVVSM--AEVRECEMV--LPS 55
           +   EP  LR  + D+V   LQIAE+  +  GTR L I  VV++  A  R   M+  LP 
Sbjct: 261 LAGTEPRFLRRQIVDIVGAMLQIAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQ 320

Query: 56  LLDQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKGLEKVCAAVGGIRTVA 115
            + +                                       + L+++  A+GG   V 
Sbjct: 321 FVKKLFGVLMNLLLDIEDDPAWHAAVSEDDDAGETSNYGFGQ-ECLDRLSIALGGNTIVP 379

Query: 116 VVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEEVVNRVLKVLQDPQVQ 175
           V  ELLP YL A EW++ HA +  L  IA+  S   VM +N LE V++ VL    DP  +
Sbjct: 380 VASELLPTYLAAPEWQKHHAALVALAQIAEGCSK--VMTKN-LEHVLSMVLNSFPDPNPR 436

Query: 176 VRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVKEEAAIAMLFFLKNTL 234
           VR AA N + Q+ T+    LQ  Y      A + A+   +   V+  AA A+L F +N  
Sbjct: 437 VRWAAINAIGQLSTDLGPDLQDKYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCT 496

Query: 235 PESLTLFKSADTAMANLLSLIKEGARGIR 263
           P+ L  +   D  ++ LL L++ G + ++
Sbjct: 497 PDILVPY--LDGIVSKLLVLLQSGKQMVQ 523


>Medtr8g085950.1 | importin beta-3, putative | HC |
            chr8:35654200-35665133 | 20130731
          Length = 1117

 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 99/156 (63%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP +   +S L  +I+ PN    +N  A D AVSA+G+IC+FH++ I
Sbjct: 947  GLGVCAEFGGSVFKPLVGEALSRLNAVIQHPNALHPDNVMAYDNAVSALGKICQFHQDSI 1006

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            D +Q+VPAWL+ LP+K DLIEAK++H+QL  M  R D  L GP NQ L KI+ VF +V+ 
Sbjct: 1007 DSAQVVPAWLNCLPIKGDLIEAKVVHDQLCSMAERSDSSLLGPNNQYLPKIVAVFAEVLC 1066

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVS 416
             G +LAT +T  +M  LL +L + +P + L S   S
Sbjct: 1067 AGKDLATEQTAGRMVSLLRQLQQTLPPATLASTWSS 1102



 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 12/269 (4%)

Query: 1   MVSREPILLRPYMCDMVLDALQIAES-GVARGTRRLVIGMVVSMAEV--RECEMV--LPS 55
           +   EP  LR  + D+V   LQIAE+  +  GTR L I  V+++AE   R   M+  +P 
Sbjct: 259 LAGTEPRFLRRQIVDVVGAMLQIAEAESLEEGTRHLAIEFVITLAEARERAPGMMRKMPQ 318

Query: 56  LLDQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKGLEKVCAAVGGIRTVA 115
            + +                                       + L+++  ++GG   V 
Sbjct: 319 FISRLFAILMKMLLDIEDDPAWHTADTEDEDAGESSNYSVGQ-ECLDRLSISLGGNTIVP 377

Query: 116 VVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEEVVNRVLKVLQDPQVQ 175
           V  E LP YL A EW++RHA +  L  IA+  S  M+     LE+VV  VL    D   +
Sbjct: 378 VASEQLPAYLAAPEWQKRHAALIALAQIAEGSSKVMI---KTLEQVVAMVLNSFPDQHPR 434

Query: 176 VRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVKEEAAIAMLFFLKNTL 234
           VR AA N + Q+ T+    LQ+ Y Q    A + A+   +   V+  AA A+L F +N  
Sbjct: 435 VRWAAINAIGQLSTDLGPDLQVQYHQGVMPALAAAMDDFQNPRVQAHAASAVLNFSENCT 494

Query: 235 PESLTLFKSADTAMANLLSLIKEGARGIR 263
           PE LT +   D  ++ LL L++ G + ++
Sbjct: 495 PEILTPY--LDGIVSKLLVLLQNGKQMVQ 521


>Medtr3g064980.1 | importin-like protein | LC | chr3:29322635-29316134
            | 20130731
          Length = 1134

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 257  EGARGIRIYAELGTPKLKPYIHRLISEL--IMLIKDPNRPVSENSKAQDIAVSAIGRICE 314
               R I I A  G  + K      I  L  +M  K P R V+      D AV+A+G+I E
Sbjct: 972  HATRAIGICAMFGGDQFKASATEGIIRLRNVMSKKLPVRDVT---TLCDTAVAALGKIYE 1028

Query: 315  FHRECIDGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITV 374
            FHR+ + G + V  WLSFLPLK D  EA+  H  L+ ++ R D+ LFG  N+NL +II+V
Sbjct: 1029 FHRDNV-GPKAVQKWLSFLPLKQDFDEARYAHGLLAKLIQRSDEHLFGTDNENLPEIISV 1087

Query: 375  FIQVIEEGGNLATPETINQMNDLLTE 400
              +++ E   L + E INQM+D + +
Sbjct: 1088 VKEILSEPNRLGSEEAINQMSDFIDQ 1113


>Medtr8g099855.1 | ARM repeat protein | HC | chr8:42284444-42285922
           | 20130731
          Length = 404

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 303 DIAVSAIGRICEFHRECIDGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFG 362
           D AV+A+GRICEFHR+   G   V  WL FLPLK+D  EA+  H   S +V R D+ LFG
Sbjct: 288 DTAVAALGRICEFHRDST-GPTGVKRWLYFLPLKHDFKEARYAHGLFSKLVQRSDEHLFG 346

Query: 363 PANQNLEKIITVFIQVIEEGGNLATPETINQMNDLLTE 400
             ++NL KII V  +++     L T E  NQM D + +
Sbjct: 347 SYHENLPKIILVVKEILSGHNRLGTEEATNQMIDFIDQ 384


>Medtr3g064935.1 | HEAT repeat protein | LC | chr3:29298968-29297908
           | 20130731
          Length = 144

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 303 DIAVSAIGRICEFHRECIDGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFG 362
           D AVSA+G+I E+HR  I G + V  WL+FLPLK+D  EA+  H  LS ++   D+ LFG
Sbjct: 38  DTAVSALGKIFEYHRGSI-GPKAVQKWLNFLPLKHDFSEARYAHGLLSNLIRSSDEQLFG 96

Query: 363 PANQNLEKIITVFIQVIEEGGNLATPETINQMNDLLTE 400
             N+NL KII++  +++     L T E INQM D + +
Sbjct: 97  SNNENLPKIISIVKEILSGPDRLGTEEAINQMIDFIDQ 134