Miyakogusa Predicted Gene

Lj6g3v0389100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0389100.1 Non Characterized Hit- tr|E1Z2C1|E1Z2C1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,26.32,1e-16,DOWNSTREAM NEIGHBOR OF SON,Donson;
seg,NULL,CUFF.57756.1
         (592 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g106900.1 | downstream neighbor of Son-like protein, putat...   764   0.0  
Medtr7g029625.1 | hypothetical protein | HC | chr7:10690490-1068...   464   e-130

>Medtr7g106900.1 | downstream neighbor of Son-like protein, putative
           | HC | chr7:43552486-43560669 | 20130731
          Length = 599

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/589 (67%), Positives = 442/589 (75%), Gaps = 6/589 (1%)

Query: 4   VPTGRSMVKRKTPLELRGEQLKRASLKDLTNESTPPLASSTNATEGRRGFKKQGSFETPR 63
           +  G S+ KRKTP ELRGEQLKR S+ DLT+E +   + STNA E    FKK G F  PR
Sbjct: 17  IRNGVSIGKRKTPSELRGEQLKRESVVDLTDECSQS-SGSTNAIEVDNRFKKPGLFRAPR 75

Query: 64  YTDTQLDEVFAAKKSRFRVASGKENAKENPCLGKTSNLKNLLGFSTLDAKRQQGATCLTN 123
           Y DT+LDEVFAAKK RF++ SGKEN KENP + +TSNLKN   FST   KRQQG + L  
Sbjct: 76  YNDTRLDEVFAAKKPRFKIPSGKENVKENPYMEQTSNLKNASIFSTSAVKRQQGVSRLEK 135

Query: 124 SVASSEVRKVGLLQACQTNENCSQGKFLSVAEISSVADRSSGLAASIDMGKALRGLAALE 183
           S  S EV K G+LQA +TNE CS+GKFLSVA++SS  DRSSG A +IDMGKALRGLA+L 
Sbjct: 136 SATSGEVTKDGVLQAGETNEKCSEGKFLSVADLSSAVDRSSG-AVNIDMGKALRGLASLG 194

Query: 184 PRVDNGLADDSSERRGDLKSTVKGSFFSECHVPGQKAPLDLTLKTNMRIVSSSSVNWSAM 243
           PR DNGLA DSS+ RGD   T+  +  SEC +PG+KAPLDLTLKT+MRIVS +S NW+  
Sbjct: 195 PRGDNGLATDSSDGRGDSAPTIAVNSSSECQIPGKKAPLDLTLKTSMRIVSPASANWNE- 253

Query: 244 RGTMRGSNGFKDLHSWMYXXXXXXXXXXXXXXXXTVDGELEFLRKRQVAWEESFRDLYYM 303
              MR S GFK LHSWMY                T +GELEFLRKRQVAWEESF DLYYM
Sbjct: 254 --NMRSSQGFKVLHSWMYPQSVLPPSIISVLSSSTAEGELEFLRKRQVAWEESFHDLYYM 311

Query: 304 LRNNICGLFYVCTSQFVVMFTGGDSSRRSKCSINAYISRSTMGLRSLLKEHDLCFYMPLC 363
           LR NICGLFYVCTSQF+VMFTGGD S +SKCS NAYIS+ST G RSLL+EHDLCF MPLC
Sbjct: 312 LRKNICGLFYVCTSQFIVMFTGGDGSGKSKCSCNAYISQSTRGFRSLLREHDLCFSMPLC 371

Query: 364 HSKVELVATESLAELLEIEKQNLGQTRRSRSFSDIDNSPESLLVFSGNNNVHGLYDLLLN 423
            SK E V TE L EL EIEKQNLGQTRRSRSFSD+DNSPESLLVFSG+NNVHGL+DLLLN
Sbjct: 372 RSKEEQVTTEDLVELSEIEKQNLGQTRRSRSFSDVDNSPESLLVFSGSNNVHGLFDLLLN 431

Query: 424 YRILWTSLSGVDVPVLCSPVPFQNSALSSPDIKCMETRRAEHFAASCNKSIWKDGESAPR 483
           YR L TSLS VDVPVLCSPVPFQ+SAL+SPDIKCME RRAE  AA+ N SIWKD E A  
Sbjct: 432 YRTLVTSLSSVDVPVLCSPVPFQSSALTSPDIKCMEMRRAEDIAAN-NGSIWKDNEFAQG 490

Query: 484 SPDGLCYSIEIKDALLPPWIICSICALMSSEGRSFEASFLTEPRSVGLNIALKPTSEKWE 543
           S DGL  SIEIKD  +PPWII  ICALM SEGRSFEASFLTEP S GLN+ALK T EK E
Sbjct: 491 SSDGLLCSIEIKDTFIPPWIISRICALMGSEGRSFEASFLTEPVSSGLNVALKSTCEKSE 550

Query: 544 YKVAGSENSQDCSDTFGIAEAVVTXXXXXXXXXXXXYCEGSYTGSLSPV 592
            K AGSE+ + CS++FGI EA VT            YC+GSY  SLSPV
Sbjct: 551 SKAAGSESLRGCSNSFGIPEAAVTSSLCSCTLKSVKYCDGSYIASLSPV 599


>Medtr7g029625.1 | hypothetical protein | HC |
           chr7:10690490-10689024 | 20130731
          Length = 488

 Score =  464 bits (1193), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 296/600 (49%), Positives = 355/600 (59%), Gaps = 143/600 (23%)

Query: 9   SMVKRKTPLELRGEQLKRASLKDLTNESTPPLASSTNATEGRRGFKKQGSFETPRYTDTQ 68
           SMVKRKTP ELRGEQLKR S++DLT++    ++ S  + +                 DTQ
Sbjct: 15  SMVKRKTPSELRGEQLKRESVEDLTDDDDDEVSPSAGSAK-----------------DTQ 57

Query: 69  L-DEVFAAKKSRFRVASGKENAKENPCLGKTSNLKNLLGFSTLDAKRQQGATCLTNSVAS 127
           L  EVF+AKKS FR+ S ++          +SNL N                        
Sbjct: 58  LIGEVFSAKKSMFRIVSKEQT---------SSNLNN------------------------ 84

Query: 128 SEVRKVGLLQACQTNENCSQGKFLSVAEISS--VADRSSGLAAS--IDMGKALRGLAALE 183
                       ++NE     KFLSVA++SS  V  RSSG AA+  IDMG+AL+GLA+L 
Sbjct: 85  ------------ESNE-----KFLSVADLSSSAVVGRSSGAAATSGIDMGQALKGLASLV 127

Query: 184 PRVDNGLADDSSERRGDLKSTVKGSFFSECHV--PGQKAPLDLTLKTNMRIV-SSSSVNW 240
                 +A ++S              FS CH+  PG+ APLDLTLKT+M+IV SS+S NW
Sbjct: 128 NSAVPTIARENS--------------FSGCHINIPGKNAPLDLTLKTSMQIVFSSASANW 173

Query: 241 SAMRGTMRGSNGFKDLHSWMYXXXXXXXXXXXXXXXXTVDGELEFLRKRQVAWEESFRDL 300
           +          GFKDLHSWMY                T + ELEFLRKRQV WEESFRDL
Sbjct: 174 N------ENIRGFKDLHSWMYPQSFIPSSIISVLNSSTAEEELEFLRKRQVGWEESFRDL 227

Query: 301 YYMLRNNICGLFYVCTSQFVVMFT---GGDSSRRSKCSINAYISRSTMGLRSLLKEHDLC 357
           +YMLRNN+CGLFYVCTS+FVVMFT   G   S+  KCS NAYISRST GLRSLL+EHD+C
Sbjct: 228 FYMLRNNVCGLFYVCTSRFVVMFTGGDGSGKSKSKKCSCNAYISRSTRGLRSLLREHDIC 287

Query: 358 FYMPLCHSKV--ELVATESLAELLEIEKQNLGQTRRSRSFSDIDNSPESLLVFSGNNNVH 415
           F MPLC SKV  E+  +E L  L         +TRR RS+ D+DNSPESLLVFSGNNNVH
Sbjct: 288 FSMPLCSSKVDQEVTISEDLVGL---------KTRRQRSY-DVDNSPESLLVFSGNNNVH 337

Query: 416 GLYDLLLNYRILWTSLSGV-DVPVLCSPVPFQNSALSSPDIKCMETRRAEHFAASCNKSI 474
           GLYDLLLNY+ L  SLSGV DVPVLCSPVPFQNSA++SPDIKCME  RAE  A       
Sbjct: 338 GLYDLLLNYKTLLASLSGVEDVPVLCSPVPFQNSAMTSPDIKCMEMTRAEDIAQG----- 392

Query: 475 WKDGESAPRSPDGLCYSIEIKDALLPPWIICSICAL-MSSEG-RSFEASFLTEPRSVGLN 532
                    S + L YSIE+KDA++PPWIIC+ICAL M S+G R+FEASF+TEP S+GLN
Sbjct: 393 ---------SSNDLFYSIEVKDAIIPPWIICNICALMMGSQGRRNFEASFVTEPLSIGLN 443

Query: 533 IALKPTSEKWEYKVAGSENSQDCSDTFGIAEAVVTXXXXXXXXXXXXYCEGSYTGSLSPV 592
           +ALK                  C ++FGI +A V             YC+GSY  SLSPV
Sbjct: 444 VALKSI----------------CDNSFGIPKAAVMSSLCSCTLKSVNYCDGSYLASLSPV 487