Miyakogusa Predicted Gene

Lj6g3v0389080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0389080.2 Non Characterized Hit- tr|I1MZI6|I1MZI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.12,0,no
description,NULL; no description,Peptidase M24, structural domain;
SPT16,FACT complex subunit Spt,CUFF.57799.2
         (1055 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064470.1 | global transcription factor | HC | chr3:290461...  1640   0.0  
Medtr6g009500.1 | global transcription factor | HC | chr6:282238...  1595   0.0  

>Medtr3g064470.1 | global transcription factor | HC |
           chr3:29046156-29041073 | 20130731
          Length = 1066

 Score = 1640 bits (4247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 798/973 (82%), Positives = 851/973 (87%), Gaps = 16/973 (1%)

Query: 1   MADHRNGSD--------------SIDLNAFQTRMKTFYSHWDEHKTDLWGSCDAIAVACP 46
           MADHRNGS               +IDLN FQTR+KT Y HWDE +TDLWGS DAIAVACP
Sbjct: 1   MADHRNGSAQGSNGKASAAGSAYAIDLNTFQTRLKTLYKHWDESRTDLWGSSDAIAVACP 60

Query: 47  PPSEDLRYLKSTALNLWLLGFEFPETIMVFTKKQVHILCSQKKASILESVKKPAKEAVGA 106
           PPSEDLRYLKSTAL LW+LGFEFPETIMVFTK+Q+HILCSQKKASILESVKKPA+E+VG 
Sbjct: 61  PPSEDLRYLKSTALFLWMLGFEFPETIMVFTKEQIHILCSQKKASILESVKKPARESVGV 120

Query: 107 EIVLHVKPKNDDGTTLMDSIFHAIRTQSKADGGDVPTVGYISREAAEGKLLETWAEKLKS 166
           EIVLHVKPKNDDG +LMD+I  AIRTQSK+DG D  TVG+I+RE  EGKLL+ WAEKLKS
Sbjct: 121 EIVLHVKPKNDDGASLMDAIIRAIRTQSKSDGHDSSTVGHIAREEPEGKLLDLWAEKLKS 180

Query: 167 SKFNLTDVANGLSMLFAAKNNEELTSIKRAAYLTTSVMKNFVVSKLENVIDEEKKVSHST 226
           SKFNL+DVANG S LFAAK+ EE+TSIKRAAYLTT+VMKNFVV+KLENVIDEEKK+ HST
Sbjct: 181 SKFNLSDVANGFSALFAAKSIEEITSIKRAAYLTTNVMKNFVVAKLENVIDEEKKILHST 240

Query: 227 LMEETEKVILEPSKANCKLKAENVDICYPPIFQSGGEFDLRPSAVSNDDLLYYDSASVII 286
           LMEETEKVILEPSK NCKLKA+NVDICYPPIFQSGG+FDLRPSAVSND+ LYY++ASVII
Sbjct: 241 LMEETEKVILEPSKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYETASVII 300

Query: 287 CAVGARYKSYCSNIARTFLIDAISLQSKAYEVLLKAHEAVIGSLKPGNKLSSAYQAAVSV 346
           CAVGARYKSYCSNIARTFLIDA  +QSKAYEVLLKAHEAVIGSLKPGNKLS+AY AAVSV
Sbjct: 301 CAVGARYKSYCSNIARTFLIDAEPIQSKAYEVLLKAHEAVIGSLKPGNKLSAAYLAAVSV 360

Query: 347 VEKEAPDLLPFLTKSAGTGIGIEFRESSLNLNAKNEQIVKEGMVFNVSLGFQXXXXXXXX 406
           VEKEAPD++  LTKSAGTGIGIEFRES LN+NAKN+QIVKEGM FNVSLGFQ        
Sbjct: 361 VEKEAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMTFNVSLGFQNLQCENSK 420

Query: 407 XXXXVFSLLLADTVIINKDKTEVVTSMSSKALKDVAYSFNXXXXXXXKPSAKSDANGAEH 466
               VF+LLLADTVIINKDK++VVTS+SSKALKDVAYSFN       KP +K+D +G EH
Sbjct: 421 SKNKVFALLLADTVIINKDKSDVVTSVSSKALKDVAYSFN-EDEEEEKPKSKADHSGTEH 479

Query: 467 LMSKTTLRSDNHEVSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXSSVKNSSELV 526
           L SKTTLRSDNHE+SKEELRRQHQAELARQKNEET               SS ++S++LV
Sbjct: 480 LASKTTLRSDNHEISKEELRRQHQAELARQKNEETARRLAGGGNEAGDNRSSSRSSADLV 539

Query: 527 AYKNINDLPPPREMMIQIDQKNEAVLLPINGSMVPFHVAFIRTINSQQDTNRKCIIRIIF 586
           AYKNINDLPPPREMMIQIDQKNEAVLLPINGSMVPFHVAFIRT++SQQDTNR C +RIIF
Sbjct: 540 AYKNINDLPPPREMMIQIDQKNEAVLLPINGSMVPFHVAFIRTVSSQQDTNRNCYVRIIF 599

Query: 587 NVPGTAFNPHDSNSMKFQGSIYLKEASFRSKDPRHSSEVVQSIKTLRRQVVARESERAER 646
           NVPGT F+  D+N MKFQGSIYLKEASFRSKD RH SEVVQSIKTLRRQVVARESERAER
Sbjct: 600 NVPGTPFSSLDTN-MKFQGSIYLKEASFRSKDSRHISEVVQSIKTLRRQVVARESERAER 658

Query: 647 ATLVTQEKLQLANNKFKPIRLSDLWIRPVFGGRGRKLPGTLEGHANGFRYSTTRQDERVD 706
           ATLVTQEKLQLANN+FKPIRL DLWIRP FGGRGRK+PGTLE H NGFRYSTTR DERVD
Sbjct: 659 ATLVTQEKLQLANNRFKPIRLPDLWIRPPFGGRGRKIPGTLEAHVNGFRYSTTRSDERVD 718

Query: 707 IMFANIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNIGGGKRSA 766
           +MFANIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQN+GGGKRSA
Sbjct: 719 VMFANIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSA 778

Query: 767 YXXXXXXXXXXXXXXKNKINVEFQTFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPH 826
           Y              KNKINVEFQ+FVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPH
Sbjct: 779 YDPDELEEEQRERERKNKINVEFQSFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPH 838

Query: 827 KSSVFIVPTSACLVELIEIPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRI 886
           KSSVFIVPTSACLVELIE PFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRI
Sbjct: 839 KSSVFIVPTSACLVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRI 898

Query: 887 DSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATX 946
           DSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEAT 
Sbjct: 899 DSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATD 958

Query: 947 XXXXXXXXXXKGY 959
                     KGY
Sbjct: 959 SESEGSEESDKGY 971



 Score = 64.3 bits (155), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 36/44 (81%)

Query: 1012 ASNADREKGNEYDSDEDRQRRKAKAFGKSRAGASSSMPKRSKLR 1055
            ASNADREKGNE DS+EDR+RRKAK   +SR   SSS PKR+KLR
Sbjct: 1023 ASNADREKGNESDSEEDRKRRKAKTNQRSRGHLSSSAPKRTKLR 1066


>Medtr6g009500.1 | global transcription factor | HC |
            chr6:2822385-2827386 | 20130731
          Length = 1058

 Score = 1595 bits (4130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 796/1063 (74%), Positives = 855/1063 (80%), Gaps = 13/1063 (1%)

Query: 1    MADHRNGSDS-------IDLNAFQTRMKTFYSHWDEHKTDLWGSCDAIAVACPPPSEDLR 53
            MADHRNG  S       IDLN FQTR+KT Y HWDE +TDLWGS DAIAVACPPPS++ R
Sbjct: 1    MADHRNGKASAAGSAYAIDLNTFQTRLKTLYKHWDESRTDLWGSSDAIAVACPPPSKNTR 60

Query: 54   YLKSTALNLWLLGFEFPETIMVFTKKQVHILCSQKKASILESVKKPAKEAVGAEIVLHVK 113
            YLKSTAL LWLLGFEFPETIMVFTK Q HILCSQKKASILESVKKPAKE+VG EIVLHVK
Sbjct: 61   YLKSTALFLWLLGFEFPETIMVFTKVQTHILCSQKKASILESVKKPAKESVGVEIVLHVK 120

Query: 114  PKNDDGTTLMDSIFHAIRTQSKADGGDVPTVGYISREAAEGKLLETWAEKLKSSKFNLTD 173
            PK DDG +LMD+I  AIRTQSK+ G D  TVG+I+RE  EGKLL+ WAEKLKSSKFNL+D
Sbjct: 121  PKIDDGASLMDAIIRAIRTQSKSSGHDSSTVGHIAREEPEGKLLDLWAEKLKSSKFNLSD 180

Query: 174  VANGLSMLFAAKNNEELTSIKRAAYLTTSVMKNFVVSKLENVIDEEKKVSHSTLMEETEK 233
            VANG S LFAAK+NEE+TSIKRAAYLTT+VMKNFVVSKLENVIDEEKK+ +STLM+ETEK
Sbjct: 181  VANGFSALFAAKSNEEITSIKRAAYLTTNVMKNFVVSKLENVIDEEKKILNSTLMKETEK 240

Query: 234  VILEPSKANCKLKAENVDICYPPIFQSGGEFDLRPSAVSNDDLLYYDSASVIICAVGARY 293
            VILEPSK NCKLKA+NVDICY PIFQSGG+FDLRP   SND+ LYY++ASVIICA+GARY
Sbjct: 241  VILEPSKVNCKLKADNVDICYSPIFQSGGKFDLRPITGSNDEALYYETASVIICALGARY 300

Query: 294  KSYCSNIARTFLIDAISLQSKAYEVLLKAHEAVIGSLKPGNKLSSAYQAAVSVVEKEAPD 353
            KSYCSNIARTF+IDA  +QSKAYEVLLKAHEAVIGSLKPGNKL++AY AAVSVVEKEAP+
Sbjct: 301  KSYCSNIARTFVIDAEPIQSKAYEVLLKAHEAVIGSLKPGNKLAAAYLAAVSVVEKEAPE 360

Query: 354  LLPFLTKSAGTGIGIEFRESSLNLNAKNEQIVKEGMVFNVSLGFQXXXXXXXXXXXXVFS 413
            ++  LTKSAG GIGIEFRES LN+NAKN+QIVKEGM FNVSLGFQ            VF+
Sbjct: 361  MVSCLTKSAGAGIGIEFRESGLNINAKNDQIVKEGMAFNVSLGFQNLQCENSKSKNKVFA 420

Query: 414  LLLADTVIINKDKTEVVTSMSSKALKDVAYSFNXXXXXXXKPSAKSDANGAEHLMSKTTL 473
            LLLADTVIINKDKT+VVTS+SSKALKDVAYSFN       KP +  D +G EHL+SKTTL
Sbjct: 421  LLLADTVIINKDKTDVVTSLSSKALKDVAYSFNEDGEEE-KPKSMVDHSGTEHLVSKTTL 479

Query: 474  RSDNHEVSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXSSVKNSSELVAYKNIND 533
            RSDNHE+SKEELRRQHQAELARQKNEET                S ++S+ELVAYKNI D
Sbjct: 480  RSDNHEISKEELRRQHQAELARQKNEETARRLAGGGNGTGVNRFSSRSSAELVAYKNIYD 539

Query: 534  LPPPREMMIQIDQKNEAVLLPINGSMVPFHVAFIRTINSQQDTNRKCIIRIIFNVPGTAF 593
            LP PREMMIQIDQKNEAVLLPINGSMVPFHVAFIRT++SQQDTN  C +RIIFNVPGT  
Sbjct: 540  LPSPREMMIQIDQKNEAVLLPINGSMVPFHVAFIRTVSSQQDTNHNCYVRIIFNVPGTPS 599

Query: 594  NPHDSNSMKFQGSIYLKEASFRSKDPRHSSEVVQSIKTLRRQVVARESERAERATLVTQE 653
            + HD N +KFQGSIYLKEASFRSKD RH SEVV+SIKT R+QVVARESERAERATLVTQE
Sbjct: 600  SSHDPNLLKFQGSIYLKEASFRSKDSRHISEVVRSIKTFRQQVVARESERAERATLVTQE 659

Query: 654  KLQLANNKFKPIRLSDLWIRPVFGGRGRKLPGTLEGHANGFRYSTTRQDERVDIMFANIK 713
            KLQLANN FKPIRL DLWIRP  GGRGRK+PGTLE H NGFRYSTTR DERVD+MFANIK
Sbjct: 660  KLQLANNIFKPIRLHDLWIRPALGGRGRKIPGTLETHVNGFRYSTTRSDERVDVMFANIK 719

Query: 714  HAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNIGGGKRSAYXXXXXX 773
            HAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQN+GGGKRSAY      
Sbjct: 720  HAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELE 779

Query: 774  XXXXXXXXKNKINVEFQTFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIV 833
                    KNKINVEFQ+FVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIV
Sbjct: 780  EEQRERERKNKINVEFQSFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIV 839

Query: 834  PTSACLVELIEIPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTS 893
            PTSAC+VELIE PFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKR+  RIDSIPSTS
Sbjct: 840  PTSACIVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRNFFRIDSIPSTS 899

Query: 894  LDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATXXXXXXXX 953
            +DGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEA         
Sbjct: 900  IDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEAADSESEGSE 959

Query: 954  XXXKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS 1013
               KGY                                                      
Sbjct: 960  ESDKGYEPSDIEPESDSEEEDSESASLVESEEEEDSEEDSEEEQGKTWEELERDASNADR 1019

Query: 1014 NADREKGNEYDSDEDRQRRKAK-AFGKSRAGASSSMPKRSKLR 1055
                E  +E D    R+RRKAK AFGK R   SSSMPKR KLR
Sbjct: 1020 EKGNESDSEED----RKRRKAKAAFGKPRGNLSSSMPKRPKLR 1058