Miyakogusa Predicted Gene

Lj6g3v0388050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0388050.1 Non Characterized Hit- tr|I1MZI7|I1MZI7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41970
PE,91.3,0,TRANSCRIPTION REGULATION,NULL; CDC68 RELATED,NULL;
seg,NULL,CUFF.57800.1
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064470.1 | global transcription factor | HC | chr3:290461...   190   7e-49
Medtr6g009500.1 | global transcription factor | HC | chr6:282238...   149   1e-36

>Medtr3g064470.1 | global transcription factor | HC |
            chr3:29046156-29041073 | 20130731
          Length = 1066

 Score =  190 bits (482), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 105/183 (57%), Positives = 110/183 (60%)

Query: 1    MTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPKSF 60
            MTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDP+SF
Sbjct: 884  MTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSF 943

Query: 61   IETGGWEFLNLEAXXXXXXXXXXXXKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            IE GGWEFLNLEA            KGY                                
Sbjct: 944  IEGGGWEFLNLEATDSESEGSEESDKGYEPSDVEPESDSEEEDSESASLVESEDDEEEED 1003

Query: 121  XXXXXXXXXXXXXXXXXXXASNADREKGHEYDSEEDRQRRKVKAFGKSRASASSSMPKRS 180
                               ASNADREKG+E DSEEDR+RRK K   +SR   SSS PKR+
Sbjct: 1004 SEEDSEEEAGKTWEELEREASNADREKGNESDSEEDRKRRKAKTNQRSRGHLSSSAPKRT 1063

Query: 181  KLR 183
            KLR
Sbjct: 1064 KLR 1066


>Medtr6g009500.1 | global transcription factor | HC |
           chr6:2822385-2827386 | 20130731
          Length = 1058

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/88 (79%), Positives = 73/88 (82%)

Query: 1   MTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPKSF 60
           MTIVFKDFKR+  RIDSIPSTS+DGIKEWLDTTDIKYYESRLNLNWRQILKTITDDP+SF
Sbjct: 878 MTIVFKDFKRNFFRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSF 937

Query: 61  IETGGWEFLNLEAXXXXXXXXXXXXKGY 88
           IE GGWEFLNLEA            KGY
Sbjct: 938 IEGGGWEFLNLEAADSESEGSEESDKGY 965



 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)

Query: 140  ASNADREKGHEYDSEEDRQRRKVK-AFGKSRASASSSMPKRSKLR 183
            ASNADREKG+E DSEEDR+RRK K AFGK R + SSSMPKR KLR
Sbjct: 1014 ASNADREKGNESDSEEDRKRRKAKAAFGKPRGNLSSSMPKRPKLR 1058