Miyakogusa Predicted Gene

Lj6g3v0367990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0367990.1 Non Characterized Hit- tr|F6HQV0|F6HQV0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.35,0.00000000001,Hect, E3 ligase catalytic domain,HECT;
HECT,HECT; HECT UBIQUITIN-PROTEIN LIGASE 3 (KAKTUS
PROTEIN),N,CUFF.57748.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g066940.1 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.2 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.7 | E3 ubiquitin-protein ligase | HC | chr1:287813...    65   1e-11
Medtr1g066940.8 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.3 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.10 | E3 ubiquitin-protein ligase | HC | chr1:28781...    65   1e-11
Medtr1g066940.9 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.5 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.6 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr1g066940.4 | E3 ubiquitin-protein ligase | HC | chr1:287815...    65   1e-11
Medtr7g061200.1 | E3 ubiquitin-protein ligase | LC | chr7:221231...    61   2e-10
Medtr4g073370.3 | E3 ubiquitin-protein ligase | HC | chr4:277808...    58   2e-09
Medtr4g073370.1 | E3 ubiquitin-protein ligase | HC | chr4:277808...    58   2e-09
Medtr4g073370.2 | E3 ubiquitin-protein ligase | HC | chr4:277807...    58   2e-09

>Medtr1g066940.1 | E3 ubiquitin-protein ligase | HC |
            chr1:28781562-28771167 | 20130731
          Length = 1549

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.2 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771167 | 20130731
          Length = 1549

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.7 | E3 ubiquitin-protein ligase | HC |
            chr1:28781346-28771167 | 20130731
          Length = 1549

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.8 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771167 | 20130731
          Length = 1505

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.3 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771186 | 20130731
          Length = 1505

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.10 | E3 ubiquitin-protein ligase | HC |
            chr1:28781346-28771167 | 20130731
          Length = 1505

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.9 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771167 | 20130731
          Length = 1505

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.5 | E3 ubiquitin-protein ligase | HC |
            chr1:28781562-28771195 | 20130731
          Length = 1505

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.6 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771195 | 20130731
          Length = 1543

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr1g066940.4 | E3 ubiquitin-protein ligase | HC |
            chr1:28781562-28771195 | 20130731
          Length = 1543

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 17/91 (18%)

Query: 27   FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
             QK   GMWR D      K + Q          GLFP P+LS   +       E+   F 
Sbjct: 1205 LQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFF 1264

Query: 70   LLGYIVGRALQDGRILDLNFSKAFYKLIIKK 100
            LLG +V +ALQDGR+LDL+FSKAFYKLI+ K
Sbjct: 1265 LLGQVVAKALQDGRVLDLHFSKAFYKLILGK 1295


>Medtr7g061200.1 | E3 ubiquitin-protein ligase | LC |
           chr7:22123113-22124958 | 20130731
          Length = 465

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 13/81 (16%)

Query: 27  FQKLELGMWRGDKGDKIDDQPNGLFPHPYL-----SKTISI-ELFCHFTLLGYIVGRALQ 80
           FQ   LG+WR       +D   GLFP P+L     S  + I E+   F LLG +V +A+Q
Sbjct: 384 FQNPGLGLWR-------EDTQYGLFPRPWLKMQDESDGLKISEVQKKFVLLGQVVAKAIQ 436

Query: 81  DGRILDLNFSKAFYKLIIKKV 101
           DGR LDL+ SKAF+KLI  KV
Sbjct: 437 DGRHLDLHISKAFHKLICGKV 457


>Medtr4g073370.3 | E3 ubiquitin-protein ligase | HC |
            chr4:27780814-27770199 | 20130731
          Length = 1881

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 27/101 (26%)

Query: 25   HIFQKLELGMWR---------GDKGDKIDDQ------------PNGLFPHPYLSKTISIE 63
            H  QK+ L MWR         GD+  K   +            P GLFP P+ +   + E
Sbjct: 1514 HDLQKVGLQMWRSGSDHMEIDGDEKKKKSSEGNIARDGELVQAPLGLFPRPWPANADASE 1573

Query: 64   ------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
                  +  +F LLG +V +ALQDGR+LDL  S AFYKL++
Sbjct: 1574 GSQLFKVIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVL 1614


>Medtr4g073370.1 | E3 ubiquitin-protein ligase | HC |
            chr4:27780814-27770199 | 20130731
          Length = 1881

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 27/101 (26%)

Query: 25   HIFQKLELGMWR---------GDKGDKIDDQ------------PNGLFPHPYLSKTISIE 63
            H  QK+ L MWR         GD+  K   +            P GLFP P+ +   + E
Sbjct: 1514 HDLQKVGLQMWRSGSDHMEIDGDEKKKKSSEGNIARDGELVQAPLGLFPRPWPANADASE 1573

Query: 64   ------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
                  +  +F LLG +V +ALQDGR+LDL  S AFYKL++
Sbjct: 1574 GSQLFKVIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVL 1614


>Medtr4g073370.2 | E3 ubiquitin-protein ligase | HC |
            chr4:27780793-27770200 | 20130731
          Length = 1881

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 27/101 (26%)

Query: 25   HIFQKLELGMWR---------GDKGDKIDDQ------------PNGLFPHPYLSKTISIE 63
            H  QK+ L MWR         GD+  K   +            P GLFP P+ +   + E
Sbjct: 1514 HDLQKVGLQMWRSGSDHMEIDGDEKKKKSSEGNIARDGELVQAPLGLFPRPWPANADASE 1573

Query: 64   ------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
                  +  +F LLG +V +ALQDGR+LDL  S AFYKL++
Sbjct: 1574 GSQLFKVIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVL 1614