Miyakogusa Predicted Gene

Lj6g3v0353790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0353790.1 tr|G7J7W0|G7J7W0_MEDTR Intracellular protease
OS=Medicago truncatula GN=MTR_3g064140 PE=4
SV=1,86.6,0,DJ-1_PfpI,ThiJ/PfpI; PUTATIVE THIJ FAMILY INTRACELLULAR
PROTEASE/AMIDASE,NULL; THIJ/PFPI,NULL; no de,CUFF.57737.1
         (388 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064140.1 | class I glutamine amidotransferase superfamily...   702   0.0  
Medtr3g064093.1 | DJ-1/PfpI family protein | HC | chr3:28828715-...    81   1e-15
Medtr3g064115.1 | DJ-1/PfpI family protein | LC | chr3:28838053-...    67   4e-11
Medtr2g078060.1 | class I glutamine amidotransferase superfamily...    53   6e-07

>Medtr3g064140.1 | class I glutamine amidotransferase superfamily
           protein | HC | chr3:28843633-28840043 | 20130731
          Length = 387

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/388 (86%), Positives = 363/388 (93%), Gaps = 1/388 (0%)

Query: 1   MAPKKVLLICGDFVEDSEAMVPFQALQAFGVTVDAVCPGKKSGDACRTAVHMLAPGGQTY 60
           MAPK+VLL+CGDF+ED E MVPFQALQAFGV+VDAVCPGKKSGD CRTAVH+L+ GGQTY
Sbjct: 1   MAPKRVLLLCGDFMEDYEGMVPFQALQAFGVSVDAVCPGKKSGDVCRTAVHILS-GGQTY 59

Query: 61  TETRGHNFTLNATFDEVDAAIYDGLWLPGGRAPEYLAHIPSVVELVAKFVSSGKQIASIC 120
           TET GHNFTLNATFDEVD   YDGLWLPGGRAPEYLAHIPSVVELV KFV SGK+IA IC
Sbjct: 60  TETVGHNFTLNATFDEVDHTSYDGLWLPGGRAPEYLAHIPSVVELVTKFVKSGKEIACIC 119

Query: 121 HGQLILAAAGVVEGRKATAFPGVKPVLLAAGAHWVEPETSATTVVHDNLITASTYDGHTE 180
           HG LILAAAGVVEGRK TAFP VKPVL+AAGAHWVEP+T +TTVV  NLITA TY+GH E
Sbjct: 120 HGHLILAAAGVVEGRKCTAFPPVKPVLVAAGAHWVEPDTMSTTVVDGNLITAPTYEGHPE 179

Query: 181 VIQNFVKALGGKISGSNKMILFICGDYMEDYEVMVPFQSLQALGCHVDAVCPTKKAGDTC 240
           ++++F+KALGGKISGS+K ILFICGDYMEDYEV VPFQSLQALGCHVDAVCP+KKAGDTC
Sbjct: 180 LLRHFLKALGGKISGSDKKILFICGDYMEDYEVKVPFQSLQALGCHVDAVCPSKKAGDTC 239

Query: 241 PTAVHDFEGDQTYSEKPGHNFTLTATFDEVNVSGYDALVIPGGRSPEYLALNESVIAMVK 300
           PTAVHDFEGDQTYSEKPGHNF LTATFD+V+ SGYDALVIPGGRSPEYL+LNE+VIA+VK
Sbjct: 240 PTAVHDFEGDQTYSEKPGHNFALTATFDDVDPSGYDALVIPGGRSPEYLSLNEAVIALVK 299

Query: 301 HFMESNKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDG 360
           HFME+ KPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDG
Sbjct: 300 HFMENKKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDG 359

Query: 361 NLVTGAAWPGHPEFISQLMGLLGIQISF 388
           NLVTGAAWPGHPEFI+QLM LLGIQ+SF
Sbjct: 360 NLVTGAAWPGHPEFIAQLMALLGIQVSF 387


>Medtr3g064093.1 | DJ-1/PfpI family protein | HC |
           chr3:28828715-28828203 | 20130731
          Length = 92

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 24/100 (24%)

Query: 58  QTYTETRGHNFTLNATFDEVDAAIYDGLWLPGGRAPEYLAHIPSVVELVAKFVSSGKQI- 116
           QTY ET GH FTLN TFDE+D                          LV   V+SG++I 
Sbjct: 7   QTYIETVGHKFTLNRTFDEIDHT-----------------------NLVDMLVNSGQEII 43

Query: 117 ASICHGQLILAAAGVVEGRKATAFPGVKPVLLAAGAHWVE 156
           A ICHG +I AAA ++EG K TAFP +K VL+AAGA W E
Sbjct: 44  ACICHGHMIQAAANLLEGPKCTAFPPLKLVLIAAGAFWFE 83



 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 22/99 (22%)

Query: 251 QTYSEKPGHNFTLTATFDEVNVSGYDALVIPGGRSPEYLALNESVIAMVKHFMESNKPVA 310
           QTY E  GH FTL  TFDE++ +    +++  G+                      + +A
Sbjct: 7   QTYIETVGHKFTLNRTFDEIDHTNLVDMLVNSGQ----------------------EIIA 44

Query: 311 SICHGQQILAAAGVLKGRKCTAYPAVKLNVVLSGATWLE 349
            ICHG  I AAA +L+G KCTA+P +KL ++ +GA W E
Sbjct: 45  CICHGHMIQAAANLLEGPKCTAFPPLKLVLIAAGAFWFE 83


>Medtr3g064115.1 | DJ-1/PfpI family protein | LC |
           chr3:28838053-28837425 | 20130731
          Length = 94

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 103 VELVAKFVSSGKQI-ASICHGQLILAAAGVVEGRKATAFPGVKPVLLAAGAHWVE 156
           +EL    V+SG++I A  CHG LILAAA ++EG K T FP +KPVL+AAGAHWVE
Sbjct: 1   MELEDMLVNSGQEIIACFCHGHLILAAANLLEGCKCTDFPPLKPVLIAAGAHWVE 55



 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 31/39 (79%), Gaps = 3/39 (7%)

Query: 288 YLALNESVIAMVKHFMESNKPVASICHGQQILAAAGVLK 326
           YLAL    IA+VK FME+ KPVASICH Q ILAAAGVLK
Sbjct: 58  YLAL---FIALVKPFMENKKPVASICHSQHILAAAGVLK 93


>Medtr2g078060.1 | class I glutamine amidotransferase superfamily
           protein | HC | chr2:32401634-32405604 | 20130731
          Length = 440

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 160/395 (40%), Gaps = 76/395 (19%)

Query: 4   KKVLLICGDFVEDSEAMVPFQALQAFGVTVDAVCPGKKSGDACRTAVHMLAPGGQTYTET 63
           +KVL+   D  E  EA++    L+  G  V           A R +V  L          
Sbjct: 52  RKVLVPIADGTEPMEAVITIDVLRRSGADVTVASA------ANRLSVQAL---------- 95

Query: 64  RGHNFTLNATFDEVDAAIYDGLWLPGGRAPEYLAHIPSVVE-LVAKFVSSGK-QIASICH 121
            G     +A+  +V    +D + LPGG          +V+E LV K V  GK   A    
Sbjct: 96  HGVKIIADASVSDVVNTAFDLVALPGGVPGVDNLRDSAVLEGLVKKHVEDGKLYAAVCAA 155

Query: 122 GQLILAAAGVVEGRKATAFPGVKPVLLAAGAHWVEPETSATTVVH-----DNLITASTYD 176
             ++L   G+++G KAT  P            ++E  +S TT V      D  +  S   
Sbjct: 156 PAVVLGPWGLLKGLKATGHPS-----------FMEKLSSYTTSVESRVQLDGRVVTSRAP 204

Query: 177 GHTEVIQNFVKALGGKISGSNKMI-----LFICGDYMEDY----------------EVMV 215
           G T     F  AL  ++ G  K       L +  ++ ++Y                +++V
Sbjct: 205 GTT---MEFGVALVEQLLGKEKADEVAGPLVMRSNHADEYTFLELNSVQWTFDNPPKILV 261

Query: 216 PF----QSLQALGCHVDAVCPTKKAGDTCPTAVHDFEGDQTYSEKPGHNFTLTATFDEVN 271
           P     + ++A+   VD +    KA     +     E + +   K   +  L    DE  
Sbjct: 262 PIANGTEEMEAV-IIVD-ILRRAKANVVVASVEDKLEIEASRKVKLQADVLL----DEAA 315

Query: 272 VSGYDALVIPGG-RSPEYLALNESVIAMVKHFMESNKPVASICHGQQI-LAAAGVLKGRK 329
            + YD +V+PGG    +  A +E+++ ++K   ESNK   +IC    + L   G+LKG+K
Sbjct: 316 KTSYDLIVLPGGIGGAQAFANSETLVNLLKKQRESNKYYGAICASPALALEPHGLLKGKK 375

Query: 330 CTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVT 364
            T +PA  +   LS  + +E    +R   DGNL+T
Sbjct: 376 ATGFPA--MCSKLSDQSEVE----NRVVIDGNLIT 404