Miyakogusa Predicted Gene

Lj6g3v0352720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0352720.1 Non Characterized Hit- tr|B8ANZ2|B8ANZ2_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,65.28,5e-17,eIF-5_eIF-2B,Translation initiation factor IF2/IF5;
SUBFAMILY NOT NAMED,NULL; EUKARYOTIC TRANSLATION,CUFF.57730.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g467620.2 | eukaryotic translation initiation factor 2 sub...   257   2e-69
Medtr3g467620.1 | eukaryotic translation initiation factor 2 sub...   257   2e-69
Medtr5g075530.1 | eukaryotic translation initiation factor 2 sub...   256   4e-69
Medtr5g075530.2 | eukaryotic translation initiation factor 2 sub...    56   9e-09
Medtr7g082940.1 | eukaryotic translation initiation factor 5 | H...    53   5e-08

>Medtr3g467620.2 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr3:27896951-27892542 | 20130731
          Length = 269

 Score =  257 bits (657), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 122/125 (97%), Positives = 122/125 (97%)

Query: 1   MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 60
           MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM FLLAELGTSGSLDGQQRLVVKGRFA
Sbjct: 143 MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFA 202

Query: 61  PKNFEGILRRYINEYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 120
           PKNFEGILRRYINEYVIC GCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG
Sbjct: 203 PKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 262

Query: 121 RRNAG 125
           RR AG
Sbjct: 263 RRTAG 267


>Medtr3g467620.1 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr3:27896952-27892542 | 20130731
          Length = 269

 Score =  257 bits (657), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 122/125 (97%), Positives = 122/125 (97%)

Query: 1   MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 60
           MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM FLLAELGTSGSLDGQQRLVVKGRFA
Sbjct: 143 MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFA 202

Query: 61  PKNFEGILRRYINEYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 120
           PKNFEGILRRYINEYVIC GCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG
Sbjct: 203 PKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 262

Query: 121 RRNAG 125
           RR AG
Sbjct: 263 RRTAG 267


>Medtr5g075530.1 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr5:32120341-32114833 | 20130731
          Length = 322

 Score =  256 bits (654), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 121/126 (96%), Positives = 123/126 (97%)

Query: 1   MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 60
           MRPPQVLREGTKKTVFVNFMDLCK+MHR PDHVMAFLLAELGTSGSLDGQQRLVVKGRFA
Sbjct: 197 MRPPQVLREGTKKTVFVNFMDLCKSMHRPPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 256

Query: 61  PKNFEGILRRYINEYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 120
           PKNFEGILRRYINEYVIC GCKSPDT+LSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG
Sbjct: 257 PKNFEGILRRYINEYVICIGCKSPDTLLSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 316

Query: 121 RRNAGT 126
           RRNAG 
Sbjct: 317 RRNAGA 322


>Medtr5g075530.2 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr5:32120341-32114859 | 20130731
          Length = 230

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 24/25 (96%), Positives = 25/25 (100%)

Query: 1   MRPPQVLREGTKKTVFVNFMDLCKT 25
           MRPPQVLREGTKKTVFVNFMDLCK+
Sbjct: 197 MRPPQVLREGTKKTVFVNFMDLCKS 221


>Medtr7g082940.1 | eukaryotic translation initiation factor 5 | HC |
           chr7:31827109-31830205 | 20130731
          Length = 439

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 13  KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
           KT  VN +D+ K + R   +   +   ELG     D +     V G        G+L  +
Sbjct: 35  KTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94

Query: 72  INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
           I +YV C+GC +P+T I+  + ++  ++C  CG
Sbjct: 95  IKKYVQCYGCGNPETEIIITKTQMIQMKCAACG 127