Miyakogusa Predicted Gene

Lj6g3v0326360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0326360.1 Non Characterized Hit- tr|A5AZN9|A5AZN9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.13,3e-16,seg,NULL,CUFF.57747.1
         (288 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g467150.1 | hypothetical protein | HC | chr3:27680826-2767...   276   1e-74
Medtr5g075400.1 | hypothetical protein | HC | chr5:32055351-3205...   216   2e-56
Medtr5g018510.2 | extra-large GTP-binding protein | HC | chr5:69...    51   1e-06
Medtr5g018510.1 | extra-large GTP-binding protein | HC | chr5:69...    51   1e-06
Medtr5g027970.2 | extra-large GTP-binding protein | HC | chr5:11...    49   4e-06
Medtr5g027970.1 | extra-large GTP-binding protein | HC | chr5:11...    49   4e-06
Medtr5g027970.3 | extra-large GTP-binding protein | HC | chr5:11...    49   5e-06
Medtr5g027970.4 | extra-large GTP-binding protein | HC | chr5:11...    49   5e-06
Medtr6g071360.1 | extra-large GTP-binding protein | HC | chr6:26...    49   6e-06
Medtr8g079010.1 | extra-large GTP-binding protein | HC | chr8:33...    49   6e-06

>Medtr3g467150.1 | hypothetical protein | HC |
           chr3:27680826-27678809 | 20130731
          Length = 272

 Score =  276 bits (707), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 173/288 (60%), Gaps = 22/288 (7%)

Query: 2   KKTQQVKPRLEELYQGVPDESVNLTFQDLANVNSSHKTIEPLSEDSIISNXXXXXXXXXX 61
           KKT + KP+LEELYQG+PDESVNLTFQDL N N   + I      +I +           
Sbjct: 6   KKTMEEKPKLEELYQGIPDESVNLTFQDLPNWN---RNITISEGSAINTPTRNIPSPSLS 62

Query: 62  XXXXXXXHD-FKKGLQVXXXXXXXXXXXXXXXXXXXXXEYQVRHAGKGAHSPQSRASEYS 120
                  HD FKKG +V                     +   RH G G  S  S+ASE+S
Sbjct: 63  PMSMSPTHDEFKKGFKVYSNHKYN--------------QQNFRHRGVGVQSTPSKASEHS 108

Query: 121 MGYDAMSGESLXXXXXXXXXXXXXXIPHSKMCSICCSYVYFFRTRCLVCGRVYCKQCVER 180
           MGYDAMSGESL              IPHSK+C+IC  YVYFFRTRCLVCGRVYCKQCVE 
Sbjct: 109 MGYDAMSGESLASGKGGAIRRRRQGIPHSKICTICNDYVYFFRTRCLVCGRVYCKQCVEI 168

Query: 181 GMGEMTEGRKCIECLGLRFSQRYIERAGIVWCCSWRYPITLKQVELKWAEKGPRRSGDRG 240
           GMGE+ EGRKCIECLGLRFSQRYIERAG++ C SWRYP TLKQ ELKWAEKGPRR+GD+G
Sbjct: 169 GMGELREGRKCIECLGLRFSQRYIERAGLLGCLSWRYPSTLKQSELKWAEKGPRRNGDKG 228

Query: 241 YGHHHGMAXXXXXXXXXXXXXXXFASNDPSFIMSGTYSAFSPHRHLPL 288
           YGH                     +S++ ++ MS  YS FSPH  +PL
Sbjct: 229 YGHQSRPTTPTTPRSPLSIA----SSSEATYAMSAAYSPFSPHHRVPL 272


>Medtr5g075400.1 | hypothetical protein | HC |
           chr5:32055351-32052824 | 20130731
          Length = 314

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 159/311 (51%), Gaps = 38/311 (12%)

Query: 11  LEELYQGVPDESVNLTFQDLANVNSSHK-----TIEPLSEDSIISNXXXXXXXXXXXXXX 65
           LE LY G+PDESVNLTFQDLA+VN+S       T +P+SE   +SN              
Sbjct: 9   LETLYLGIPDESVNLTFQDLADVNTSENRKQATTNQPVSE---VSNNVPIRTNLSPSSSL 65

Query: 66  XX--XHDFKKGLQVXXXXX-------------------XXXXXXXXXXXXXXXXEYQVRH 104
                 DF KGLQ                                           Q  H
Sbjct: 66  AKIPSLDFSKGLQASNQHNHHHHDIGQGNSPWGQFGHRIEENREHVHVHVHVHDPPQFSH 125

Query: 105 AGKGAHSPQSRA-----SEYSMGYDAMSGESLXXXXXXXXXXXXXXIPHSKMCSICCSYV 159
           A     SP+SR      S YS+ YD +S  S               IPHSK+C+IC +YV
Sbjct: 126 ANGSTKSPRSRTGGDDHSAYSLSYDDVSTASGRGGGGGSGGRRRPGIPHSKICTICSTYV 185

Query: 160 YFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWCCSWRYPI 219
           Y FRTRCLVCGRVYC +CV+ GMGEM EGRKCIECLGL+FSQRYIERAG + CC+WRY  
Sbjct: 186 YIFRTRCLVCGRVYCSRCVKIGMGEMVEGRKCIECLGLKFSQRYIERAGKIGCCNWRYSA 245

Query: 220 TLKQVELKWAEKGPRRSGDRGYGHHHGMAXXXXXXXXXXXXXXXFASNDP-SFIMSGTYS 278
           T+KQ EL  AEKGPRRS  R YG   G+A                 SN+  SF+MS T+S
Sbjct: 246 TMKQAELMCAEKGPRRS-RRSYG-QSGVANSTSRSPITPRSPHAIGSNNEHSFVMSNTFS 303

Query: 279 AFSP-HRHLPL 288
            FSP H +LP 
Sbjct: 304 PFSPHHNNLPF 314


>Medtr5g018510.2 | extra-large GTP-binding protein | HC |
           chr5:6910402-6904444 | 20130731
          Length = 908

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 166 CLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWCCSWRYPITLKQVE 225
           CLVC   YC  CV R MG M EGRKC+ C+G    +      G    CS      L Q+E
Sbjct: 255 CLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFAIDESNRVNLG---KCSRMLKRLLNQLE 311

Query: 226 LKWAEKGPR 234
           ++   K  R
Sbjct: 312 VRQIMKAER 320


>Medtr5g018510.1 | extra-large GTP-binding protein | HC |
           chr5:6910566-6904338 | 20130731
          Length = 907

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 166 CLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWCCSWRYPITLKQVE 225
           CLVC   YC  CV R MG M EGRKC+ C+G    +      G    CS      L Q+E
Sbjct: 255 CLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFAIDESNRVNLG---KCSRMLKRLLNQLE 311

Query: 226 LKWAEKGPR 234
           ++   K  R
Sbjct: 312 VRQIMKAER 320


>Medtr5g027970.2 | extra-large GTP-binding protein | HC |
           chr5:11688213-11683023 | 20130731
          Length = 839

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)

Query: 150 KMCSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           ++C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIG 215


>Medtr5g027970.1 | extra-large GTP-binding protein | HC |
           chr5:11688958-11683023 | 20130731
          Length = 839

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)

Query: 150 KMCSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           ++C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIG 215


>Medtr5g027970.3 | extra-large GTP-binding protein | HC |
           chr5:11688958-11683023 | 20130731
          Length = 605

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)

Query: 150 KMCSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           ++C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIG 215


>Medtr5g027970.4 | extra-large GTP-binding protein | HC |
           chr5:11688213-11683023 | 20130731
          Length = 605

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)

Query: 150 KMCSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           ++C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIG 215


>Medtr6g071360.1 | extra-large GTP-binding protein | HC |
           chr6:26415368-26406087 | 20130731
          Length = 878

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 166 CLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWC 212
           CLVC   YC  CV + MG M EGRKC+ C+G    +  I+R+ +  C
Sbjct: 224 CLVCDARYCNNCVLKAMGSMPEGRKCVSCIGKAIDE--IKRSSLGKC 268


>Medtr8g079010.1 | extra-large GTP-binding protein | HC |
           chr8:33696030-33701682 | 20130731
          Length = 786

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 163 RTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWCCSWRYPITLK 222
           +  CLVC   YC  CV R MG M EGRKC+ C+G    +    + G +  CS      L 
Sbjct: 130 KETCLVCDAKYCANCVLRAMGSMPEGRKCVGCIGYSIDE---SKRGSLGKCSRMLRRLLN 186

Query: 223 QVELKWAEKGPR 234
            +E++   K  R
Sbjct: 187 ILEVRQVMKAER 198