Miyakogusa Predicted Gene

Lj6g3v0227600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0227600.1 Non Characterized Hit- tr|I3SAL6|I3SAL6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0.00000000000001,seg,NULL; DUF4033,Domain of unknown function
DUF4033,CUFF.57657.1
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g080840.1 | D27 family protein, putative | HC | chr3:36588...   375   e-104
Medtr1g471050.1 | beta-carotene isomerase D27 | HC | chr1:314561...   164   9e-41
Medtr7g095920.1 | beta-carotene isomerase D27 | LC | chr7:384656...   157   8e-39
Medtr1g086840.1 | D27 family protein, putative | HC | chr1:38882...   122   5e-28
Medtr1g086840.2 | D27 family protein, putative | HC | chr1:38882...    79   6e-15

>Medtr3g080840.1 | D27 family protein, putative | HC |
           chr3:36588592-36585417 | 20130731
          Length = 266

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/270 (72%), Positives = 211/270 (78%), Gaps = 10/270 (3%)

Query: 1   MVVLSFQVVQLTPHHPQPVSLRRGGARTNIIRCGIAEPSGEPAPFGEKTRYNDGVFARVF 60
           MVVLSFQVV      P   + R  GA    IRCGIAEPSGEPAP G+KTRYND +F +VF
Sbjct: 1   MVVLSFQVVPQLIITPPQYAPRASGA---TIRCGIAEPSGEPAPLGQKTRYNDSIFEKVF 57

Query: 61  MTLFARKMEKFAKPV-RKGEENKKKEGL-----YDYESFVDXXXXXXXXXXXXXXXXXXX 114
           MTLFARKME FA+PV    ++ K+K+GL     YDYESFVD                   
Sbjct: 58  MTLFARKMEPFAEPVIGNAKKKKEKKGLLDVWEYDYESFVDVSKRVMLRRSRLQQQQVVR 117

Query: 115 EVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVVEVEINGVKQKSGV 174
           EVLLSMLPPGAPAQFRKLFPPT+WAAEFNAALTVPFFHWLVGPSEV+EVEINGVKQKSGV
Sbjct: 118 EVLLSMLPPGAPAQFRKLFPPTRWAAEFNAALTVPFFHWLVGPSEVIEVEINGVKQKSGV 177

Query: 175 HIKKCRYLENSGCVGMCVNMCKTPTQDFFTNEFGLPLTMIPNFEDMSCEMVYGQAPPPFE 234
           HIKKCRYLENSGCVG CVNMCK PTQDFFTNEFGLPLTMIPNFEDMSC+MVYGQ PP FE
Sbjct: 178 HIKKCRYLENSGCVGQCVNMCKIPTQDFFTNEFGLPLTMIPNFEDMSCDMVYGQTPPSFE 237

Query: 235 EDPVSKQPCYAKICSVVPQPSTSVCPKLQG 264
           +DPVSKQPCYA IC V   P++S+CPKLQ 
Sbjct: 238 DDPVSKQPCYADICPVA-NPNSSICPKLQS 266


>Medtr1g471050.1 | beta-carotene isomerase D27 | HC |
           chr1:31456119-31465321 | 20130731
          Length = 252

 Score =  164 bits (415), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 132/250 (52%), Gaps = 13/250 (5%)

Query: 9   VQLTPHHPQPVSLRRGGARTNIIRCGIAEPSGEPA--PFGEKTRYNDGVFARVFMTLFAR 66
           + LTP   Q   LR     T ++   +A P+ + +     +   Y D  F ++ +   ++
Sbjct: 10  MSLTPTLAQWKKLRLKPKHTFVVGV-LARPTDDISEETLRKTNVYKDNWFDKLAINHLSK 68

Query: 67  KMEKFAKPVRKGEENKKKEGLYDYESFVDXXXXXXXXXXXXXXXXXXXEVLLSMLPPGAP 126
            ++        G  N K      ++S V+                   + L    P    
Sbjct: 69  SVQ-----AATGISNNKS----GFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPIL 119

Query: 127 AQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVVEVEINGVKQKSGVHIKKCRYLENSG 186
           +  R++ PP+K A E+ A  T  FF WL+GPSEV E EING ++K+ VHIKKCR+LE + 
Sbjct: 120 SVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETN 179

Query: 187 CVGMCVNMCKTPTQDFFTNEFGLPLTMIPNFEDMSCEMVYGQAPPPFEEDPVSKQPCYAK 246
           CVGMC+N+CK P+Q F  + FG+P+ M+PNF+DMSCEM++GQ PP   +DP  KQPCY K
Sbjct: 180 CVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCY-K 238

Query: 247 ICSVVPQPST 256
           +C      +T
Sbjct: 239 LCKAKKNHAT 248


>Medtr7g095920.1 | beta-carotene isomerase D27 | LC |
           chr7:38465640-38462597 | 20130731
          Length = 248

 Score =  157 bits (398), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 124/241 (51%), Gaps = 22/241 (9%)

Query: 10  QLTPHHPQPVSLRRGGARTNIIRCGIAEPSGEPAPFGEKTRYNDGVFARVFMTLFARKME 69
            L  H P  VS+ R  +  +I        + E A    K+ Y D  F  + +   ++ ++
Sbjct: 21  NLIKHPPSIVSVLRKPSNHDI--------TEETA----KSVYKDNWFDLIAINHLSKTVQ 68

Query: 70  KFAKPVRKGEENKKKEGLYDYESFVDXXXXXXXXXXXXXXXXXXXEVLLSMLPPGAPAQF 129
                   G  N K      YES V+                   + L  + P    A  
Sbjct: 69  -----AATGLRNNKS----GYESLVEAATMAKQKFNAIQQQEVTIQALDKLFPQFVFALI 119

Query: 130 RKLFPPTKWAAEFNAALTVPFFHWLVGPSEVVEVEINGVKQKSGVHIKKCRYLENSGCVG 189
           +K   P K+  EF A +T  FF WL+GPSEV E EING  +++ V+IKKCR+LE + CVG
Sbjct: 120 KKQPLPPKFTREFFALITTMFFTWLLGPSEVRESEINGRIERNAVYIKKCRFLEETNCVG 179

Query: 190 MCVNMCKTPTQDFFTNEFGLPLTMIPNFEDMSCEMVYGQAPPPFEEDPVSKQPCYAKICS 249
           MCVNMCK PTQ F  N  G+P+ M+PNF+DMSCEM++GQ PP   +DP  KQPCY K C 
Sbjct: 180 MCVNMCKLPTQSFIKNTLGMPVNMVPNFDDMSCEMIFGQDPPASIDDPSLKQPCY-KQCK 238

Query: 250 V 250
           V
Sbjct: 239 V 239


>Medtr1g086840.1 | D27 family protein, putative | HC |
           chr1:38882140-38884971 | 20130731
          Length = 260

 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 107/220 (48%), Gaps = 18/220 (8%)

Query: 33  CGIAEPSGEPAPFGE----KTRYNDGVFARVFMTLFARKMEKFAKPVRKGEENKKKEGLY 88
           C  A  S  P   G     K+ Y  GV   +F+ LF  K+ +       G E+KK     
Sbjct: 25  CVSASSSSGPKTVGVAAAPKSEYKPGVIDDLFLNLFRTKLVQ-----EVGWESKKP---- 75

Query: 89  DYESFVDXXXXXXXX-XXXXXXXXXXXEVLLSMLPPGAPAQFRKLFPPT---KWAAEFNA 144
            Y+  ++                     +L S+ PP     ++ L  P    K AA   A
Sbjct: 76  GYDGLIEVANRLMMKGTTNSDTIEATVRILRSLFPPFLLELYKMLIAPIGGGKVAAIMVA 135

Query: 145 ALTVPFFHWLVGPSEVVEVEI-NGVKQKSGVHIKKCRYLENSGCVGMCVNMCKTPTQDFF 203
            +T     WL+GP +V  VE+ NG    SGVH+++C+YLE S CVG+C+N CK PTQ FF
Sbjct: 136 RVTALTCQWLMGPCKVNSVELPNGTSWNSGVHVERCKYLEESKCVGICLNTCKFPTQTFF 195

Query: 204 TNEFGLPLTMIPNFEDMSCEMVYGQAPPPFEEDPVSKQPC 243
            +  G+PL M PNF D SC+  +G  PP  E+D V K+PC
Sbjct: 196 KDHMGVPLLMKPNFADYSCQFKFGVLPPLPEDDTVLKEPC 235


>Medtr1g086840.2 | D27 family protein, putative | HC |
           chr1:38882140-38884357 | 20130731
          Length = 222

 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 18/177 (10%)

Query: 33  CGIAEPSGEPAPFGE----KTRYNDGVFARVFMTLFARKMEKFAKPVRKGEENKKKEGLY 88
           C  A  S  P   G     K+ Y  GV   +F+ LF  K+ +       G E+KK     
Sbjct: 25  CVSASSSSGPKTVGVAAAPKSEYKPGVIDDLFLNLFRTKLVQ-----EVGWESKKP---- 75

Query: 89  DYESFVDXXXXXXXX-XXXXXXXXXXXEVLLSMLPPGAPAQFRKLFPPT---KWAAEFNA 144
            Y+  ++                     +L S+ PP     ++ L  P    K AA   A
Sbjct: 76  GYDGLIEVANRLMMKGTTNSDTIEATVRILRSLFPPFLLELYKMLIAPIGGGKVAAIMVA 135

Query: 145 ALTVPFFHWLVGPSEVVEVEI-NGVKQKSGVHIKKCRYLENSGCVGMCVNMCKTPTQ 200
            +T     WL+GP +V  VE+ NG    SGVH+++C+YLE S CVG+C+N CK PTQ
Sbjct: 136 RVTALTCQWLMGPCKVNSVELPNGTSWNSGVHVERCKYLEESKCVGICLNTCKFPTQ 192