Miyakogusa Predicted Gene

Lj6g3v0217180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0217180.1 Non Characterized Hit- tr|I4HTV3|I4HTV3_MICAE
Uncharacterized protein OS=Microcystis aeruginosa PCC
,35.1,9e-19,seg,NULL,CUFF.57622.1
         (324 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g082680.1 | transmembrane protein, putative | HC | chr3:37...   415   e-116

>Medtr3g082680.1 | transmembrane protein, putative | HC |
           chr3:37307120-37304617 | 20130731
          Length = 324

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/337 (64%), Positives = 251/337 (74%), Gaps = 28/337 (8%)

Query: 1   MLLAKPNLISCNFPTLNSRTSLHPHNPKLTRVXXXXXXXXXXXXRCC----------FKV 50
           +++AKPNLISCNFP+L ++ S+ PH   +T V             CC           K 
Sbjct: 3   LVVAKPNLISCNFPSLKTKKSIQPH---ITVVASGC---------CCRLSSFKPLVAMKT 50

Query: 51  PLHAKTNSNAPFPASRKMGLLHVCHTSKKE-TDIETTQ--GRDWTTSILLFFLWAALMYY 107
           P  A T S   F        + +C+ S K+ + +E  +   RDWTTSILLF LWAAL+YY
Sbjct: 51  PFVAATTS---FRRKSSSSSIVICNDSNKQNSSVEEKEEVKRDWTTSILLFLLWAALIYY 107

Query: 108 VFFLSPDQTPTRDLYFXXXXXXXXGDDGFRMNEVLVSMWYIMGLWPLAYSMLLLPTGRSS 167
           V FLSP+QTP+RD+YF        GDDGFRMNEVLVS WYIMG WPL YSMLLLPTGRSS
Sbjct: 108 VSFLSPNQTPSRDMYFLKKLLNLKGDDGFRMNEVLVSEWYIMGFWPLVYSMLLLPTGRSS 167

Query: 168 ESKIPVWPFLILSCFGGVYALLPYFVLWKPPAPPVEETQLKTWPLNFLESKVTAVISLAA 227
           +S +PVWPFL  S FGG+YALLPYFVLWKPP PPVEE +LKTWPLNFLESK+TA+I LA+
Sbjct: 168 KSSVPVWPFLSASFFGGIYALLPYFVLWKPPPPPVEEAELKTWPLNFLESKITAMILLAS 227

Query: 228 GIGLITYAGLSGDDVWKEFYQYFRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKG 287
           GIG+I YAGL+G+DVWKEF+QY RESKFIHI +IDFTLLSTLAPFWVYNDMT RKWFDKG
Sbjct: 228 GIGIIIYAGLAGEDVWKEFFQYCRESKFIHITSIDFTLLSTLAPFWVYNDMTARKWFDKG 287

Query: 288 SWLLPVSLIPFLGPGLYLLLRPSLSTMAISQTPVEPE 324
           SWLLPVSLIP LGP LY+LLRPSLST A++Q+P E E
Sbjct: 288 SWLLPVSLIPLLGPALYILLRPSLSTSAVAQSPAESE 324