Miyakogusa Predicted Gene

Lj6g3v0217000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0217000.1 Non Characterized Hit- tr|I1MN15|I1MN15_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43057
PE,70.79,0,UNCHARACTERIZED,NULL; seg,NULL; NUC153,NUC153;
coiled-coil,NULL,NODE_28261_length_2378_cov_50.870480.path2.1
         (710 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g096820.1 | pre-rRNA-processing esf1-like protein | HC | c...   545   e-155
Medtr4g073330.1 | pre-rRNA-processing esf1-like protein | LC | c...   455   e-128
Medtr3g107330.1 | hypothetical protein | LC | chr3:49513411-4951...   141   2e-33
Medtr3g107350.1 | pre-rRNA-processing esf1-like protein | HC | c...   132   1e-30

>Medtr4g096820.1 | pre-rRNA-processing esf1-like protein | HC |
           chr4:38530618-38526216 | 20130731
          Length = 737

 Score =  545 bits (1405), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 316/535 (59%), Positives = 364/535 (68%), Gaps = 25/535 (4%)

Query: 192 ETHRLAVVNMDWRYVKAVDLYVLLSSFVPPNGMIKSVTVYPSEFGIQRMKEEEVHGPVGL 251
           ETHRLAVVNMDWRYVKAVDLYVL SS  P +G+IKSVT+YP+EFG+QRM EEEV GPVGL
Sbjct: 212 ETHRLAVVNMDWRYVKAVDLYVLFSSLAPTSGLIKSVTIYPTEFGLQRMNEEEVKGPVGL 271

Query: 252 FXXXXXXXXXXXXXXXXX-----------XXKLRAYEKSRMRYYFAVVECESSTTAGYIY 300
           F                              KLRAYEKSRMRYYFA+VEC+SS TA +IY
Sbjct: 272 FDGENKRSDEDGSAEEETDEEDFHDSDSDNEKLRAYEKSRMRYYFALVECDSSATADHIY 331

Query: 301 KECDGLEFLHSSNPLDLRFIPDDMEFKQPPRDVVTEAPANYECKDFYSRALQHSKVHLSW 360
           KE DG+EF HSSNPLDLRFIPDDMEFKQPP+DV +E PANYE KDFYSRALQHSKV L+W
Sbjct: 332 KENDGVEFEHSSNPLDLRFIPDDMEFKQPPKDVASEIPANYENKDFYSRALQHSKVELTW 391

Query: 361 DEDEPLRAKTLKRKFTDEQLAQMELKEFLTSDESESDGGEDNNETDDQPDKKEKKRDKYR 420
           DEDEPLRA TLKRKFTDEQLAQ+E+ E + SD S+SD  EDNNETD++P KK+   +KY 
Sbjct: 392 DEDEPLRANTLKRKFTDEQLAQLEMDELIASDVSDSDDSEDNNETDERPRKKD---NKYL 448

Query: 421 AXXXXXXXXXXXXXXXXVQDMEVTFNTGLEDLSRHIMEKKDKKAETVWDAYLXXXXXXXX 480
           A                ++   VTFNTGL+D+S+HIMEKKDKK+ TVW+  L        
Sbjct: 449 ALLDNNSDEDGDDDAMDME---VTFNTGLQDISKHIMEKKDKKSRTVWEECLRKKREKKK 505

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXPVVEKRK---KSKIDKDHDLEDMDGV 536
                                             P ++K+K   +SK DKDH L+DMDGV
Sbjct: 506 ARKNKSKHSSSDDDSDNTDHEATEDADDFFIDEEPDIKKKKKKAESKNDKDHKLQDMDGV 565

Query: 537 NEASKXXXXXXXADDKGTDTGLKGFNLKHKKGKGKNTENAIDEGKIPNSAYEDPRFAALY 596
            +ASK       ADDKGT TGLKG+NLK KKGKGK  ENAIDEGKIPN+A++DPRFA+++
Sbjct: 566 AKASKEELELLLADDKGTGTGLKGYNLKFKKGKGKKAENAIDEGKIPNNAFDDPRFASIF 625

Query: 597 RPDFAIDPTSPQFKWSASYARQLAQKQQKGHMEPPAEREPTKLPKGTQLPSDDSGM-MQK 655
             DFAIDPT PQFK SA YARQLAQKQQKG  E   ERE  K PK TQL SD SG  ++ 
Sbjct: 626 SADFAIDPTDPQFKRSAVYARQLAQKQQKGREELSVEREHVKFPKETQLSSDGSGAKLKG 685

Query: 656 GEEGLDVSKSKKDEYELSSLVKSIKMKSKQVHLSSDGKTRKDGKSHRKAMEKKRH 710
           GEE  D  KSK+D+ ELSSLVKSIKMKSKQ+ LSSD  T+K GKS  K   K++H
Sbjct: 686 GEEVSDDLKSKQDKLELSSLVKSIKMKSKQIQLSSDVNTKKAGKSQFK---KRKH 737



 Score =  109 bits (272), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 60/72 (83%), Gaps = 1/72 (1%)

Query: 37  KAVIDDPRFSRVHTDPRFRDAPKRKTKVAIDSRFDRMFTEKNFLPSSAPIDKRGKPKNNT 96
           K VI+DPRF+ VHTDPRFR+ PK +TKV+IDSRF+RMFT K+FLPSSAP+DKRGKPK+  
Sbjct: 47  KEVIEDPRFAMVHTDPRFREPPKHQTKVSIDSRFNRMFTHKSFLPSSAPVDKRGKPKDKA 106

Query: 97  NAASQ-LHHYYK 107
           N+    L HYYK
Sbjct: 107 NSQEHSLRHYYK 118


>Medtr4g073330.1 | pre-rRNA-processing esf1-like protein | LC |
           chr4:27744250-27748377 | 20130731
          Length = 652

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/527 (52%), Positives = 337/527 (63%), Gaps = 37/527 (7%)

Query: 192 ETHRLAVVNMDWRYVKAVDLYVLLSSFVPPNGMIKSVTVYPSEFGIQRMKEEEVHGPVGL 251
           +T+RLAVVNMDW YVKAVDLYV+ +SFVPPNGMIKSV +YP+EFG+QR+KEE +HGPV L
Sbjct: 154 DTYRLAVVNMDWNYVKAVDLYVVFNSFVPPNGMIKSVAIYPTEFGLQRLKEENIHGPV-L 212

Query: 252 FXXXXXXXXXXXXXXXXXXXKLRAYEKSRMRYYFAVVECESSTTAGYIYKECDGLEFLHS 311
           F                    +RAY+KS MR+Y AVVEC+SSTTA +IYKEC+GL+FL  
Sbjct: 213 FHNENDISDEDINE------NMRAYQKSMMRFYHAVVECDSSTTAAHIYKECNGLDFL-- 264

Query: 312 SNPLDLRFIPDDMEFKQPPRDVVTEAPANYECKDFYSRALQHSKVHLSWDEDEPLRAKTL 371
           S PLDLRFIPD  EFKQ   DVVTE PANY  KDF  RALQHSKV  +WD+D+PLR +TL
Sbjct: 265 STPLDLRFIPDFWEFKQESEDVVTEVPANYVVKDFGPRALQHSKVDFTWDDDDPLRKRTL 324

Query: 372 KRKFTDEQLAQMELKEFLTSDESESDGGEDNNETDDQPDKKEKKRDKYRAXXXXXXXXXX 431
           +RKFTDEQLAQ+E K++L SD SESD   DN E DDQ D+K +K+  Y            
Sbjct: 325 RRKFTDEQLAQLEWKDYLASDASESD---DNTEADDQLDEKARKQSIYLNLVYSGNGSDE 381

Query: 432 XXXXXXVQDMEVTFNTGLEDLSRHIMEKKDKKAETVWDAYLXXXXXXXXXXXXXXXXXXX 491
                  Q+MEVTF++GLE L++ +MEKKDK  ETVW+A                     
Sbjct: 382 DAEHDIGQEMEVTFHSGLESLNKKLMEKKDK--ETVWEA-----SRRKRHEKKKAKKNKS 434

Query: 492 XXXXXXXXXXXXXXXXXXXXXXPVVEKRKKSKIDKDHDLEDMDGVNEASKXXXXXXXADD 551
                                 P V+KRKK++  K  +  D+  V++ASK       ADD
Sbjct: 435 KYSSDDDSDQQVIEAANEFIEEPSVKKRKKTEKSKTDNHMDIVAVDKASKEELELLLADD 494

Query: 552 KGTDTGLKGFNLKHKKGKGK-NTENA-IDEGKIPNSAY-EDPRFAALY-RPDFAIDPTSP 607
           K T+TGLKG++LK KK K K   EN  IDEGK+PNS Y +DPRFA  +  PD+AIDPT P
Sbjct: 495 KATETGLKGYSLKFKKRKDKMGKENVIIDEGKVPNSTYSDDPRFAHFFSSPDYAIDPTDP 554

Query: 608 QFKWSASYARQLAQKQQKGHMEPPAEREPTKLPKGTQLPSDDS--GMMQKGE-EGLDVSK 664
           QFK SASYARQ   ++QKG ME         +PK  Q+PS+++  GMM+K E EGL V K
Sbjct: 555 QFKRSASYARQQLARKQKGQME-------LSVPKVMQMPSENAGNGMMEKDEKEGLLVFK 607

Query: 665 S-KKDEYELSSLVKSIKMKSKQVHLSSDGKTRKDGKSHRKAMEKKRH 710
           S KKDE ELS LVKS+KMKSK +    + KTRKDGKS    +EKKR 
Sbjct: 608 STKKDEDELSFLVKSVKMKSKHI---LNSKTRKDGKSQFDGVEKKRQ 651



 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)

Query: 37  KAVIDDPRFSRVHTDPRFRDAPKRKTKVAIDSRFDRMFTEKNFLPSSAPIDKRGK-PKNN 95
           K +I DPRF  +HTDPRFR+A K +TKVAIDSRF  MF + +F   SAPIDKRG+  +NN
Sbjct: 24  KKLISDPRFVGMHTDPRFREARKDETKVAIDSRFKHMFNDNSFFSYSAPIDKRGRYIENN 83

Query: 96  TNAASQ-LHHYYK 107
               S  L HYYK
Sbjct: 84  LTLKSDFLRHYYK 96


>Medtr3g107330.1 | hypothetical protein | LC |
           chr3:49513411-49514756 | 20130731
          Length = 216

 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 78/99 (78%), Gaps = 2/99 (2%)

Query: 283 YYFAVVECESSTTAGYIYKECDGLEFLHSSNPLDLRFIPDDMEFKQPPRDVVTEAPANYE 342
           +Y AVVEC+SSTTA +IYKEC+GLEFL  S+P DLRFIPD  EFKQ P DVVT+ P NY 
Sbjct: 61  FYHAVVECDSSTTAAHIYKECNGLEFL--SSPFDLRFIPDIWEFKQEPMDVVTKVPTNYV 118

Query: 343 CKDFYSRALQHSKVHLSWDEDEPLRAKTLKRKFTDEQLA 381
            KDF  RALQHSKV   W++D+P R +TL RKFTDEQ++
Sbjct: 119 VKDFGPRALQHSKVDFDWEDDDPFRKRTLSRKFTDEQVS 157


>Medtr3g107350.1 | pre-rRNA-processing esf1-like protein | HC |
           chr3:49517743-49519194 | 20130731
          Length = 253

 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 18/163 (11%)

Query: 550 DDKGTDTGLKGFNLKHKKGKGK-NTENAI-DEGKIPNSAY-EDPRFAAL-YRPDFAIDPT 605
           DDKG +TGLKG+NLK KK K K   EN I DEGK+PNS Y +D RF AL + PD+AIDPT
Sbjct: 101 DDKGIETGLKGYNLKFKKRKDKMGKENVIIDEGKVPNSTYSDDQRFVALLFSPDYAIDPT 160

Query: 606 SPQFKWSASYARQLAQKQQKGHMEPPAEREPTKLPKGTQLPSDDS--GMMQKG-EEGLDV 662
            PQ+K SA+YARQ    +QKG ME         +PK  Q+  +DS  GMMQK  +EGL V
Sbjct: 161 DPQYKRSAAYARQQLAHKQKGQME-------LSVPKVMQMSFEDSGYGMMQKDKKEGLVV 213

Query: 663 SKSKK-DEYELSSLVKSIKMKSKQVHLSSDGKTRKDGKSHRKA 704
             SKK D+ +L  LVKS+KMKSK +    DGKT+KDGK + K 
Sbjct: 214 VNSKKEDKDKLLFLVKSVKMKSKHI---LDGKTKKDGKHNLKV 253