Miyakogusa Predicted Gene

Lj6g3v0216990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0216990.1 Non Characterized Hit- tr|I1KRG7|I1KRG7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,88.37,6e-17,DUF616,Protein of unknown function DUF616; SUBFAMILY
NOT NAMED,NULL; ALKALINE
CERAMIDASE-RELATED,NUL,gene.Ljchr6_pseudomol_20120830.path1.gene396.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g019450.1 | transmembrane protein | HC | chr2:6359654-6362...    92   1e-19

>Medtr2g019450.1 | transmembrane protein | HC | chr2:6359654-6362551
           | 20130731
          Length = 457

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/43 (86%), Positives = 41/43 (95%)

Query: 1   MEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVS 43
           MEEAMATARWKKWWD+NALK+QMETYC+NGLQPW+PSK PY S
Sbjct: 297 MEEAMATARWKKWWDVNALKVQMETYCKNGLQPWSPSKQPYAS 339