Miyakogusa Predicted Gene
- Lj6g3v0216890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0216890.1 Non Characterized Hit- tr|G0QQ98|G0QQ98_ICHMG
Putative uncharacterized protein OS=Ichthyophthirius
m,40.74,5e-19,ATPASE, AAA FAMILY PROTEIN,NULL; AAA ATPASE,NULL; no
description,NULL; P-loop containing nucleoside
,NODE_29990_length_921_cov_139.524429.path2.1
(126 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g096870.1 | katanin p60 ATPase subunit A-like protein | HC... 223 4e-59
Medtr7g075520.1 | AAA-type ATPase family protein | HC | chr7:282... 68 2e-12
Medtr6g023875.1 | P-loop nucleoside triphosphate hydrolase super... 67 3e-12
Medtr6g023855.1 | P-loop nucleoside triphosphate hydrolase super... 64 3e-11
Medtr1g099470.1 | P-loop nucleoside triphosphate hydrolase super... 61 3e-10
Medtr6g023845.1 | P-loop nucleoside triphosphate hydrolase super... 60 3e-10
Medtr8g099065.1 | P-loop nucleoside triphosphate hydrolase super... 60 4e-10
Medtr5g009840.1 | P-loop nucleoside triphosphate hydrolase super... 60 4e-10
Medtr6g033740.1 | P-loop nucleoside triphosphate hydrolase super... 57 5e-09
Medtr2g086160.1 | AAA-type ATPase family protein | HC | chr2:362... 56 8e-09
Medtr1g088750.2 | P-loop nucleoside triphosphate hydrolase super... 54 2e-08
Medtr1g099480.1 | P-loop nucleoside triphosphate hydrolase super... 54 2e-08
Medtr1g088750.1 | P-loop nucleoside triphosphate hydrolase super... 54 3e-08
Medtr4g053350.1 | AAA-type ATPase family protein | HC | chr4:194... 54 4e-08
Medtr4g053350.2 | AAA-type ATPase family protein | HC | chr4:194... 54 4e-08
Medtr1g101870.1 | elongation factor 1-alpha | LC | chr1:45981685... 53 7e-08
Medtr1g101870.2 | elongation factor 1-alpha | LC | chr1:45981685... 53 8e-08
Medtr1g088730.1 | P-loop nucleoside triphosphate hydrolase super... 52 1e-07
Medtr4g011810.1 | katanin p60 ATPase subunit-like protein | HC |... 50 6e-07
Medtr6g023865.1 | P-loop nucleoside triphosphate hydrolase super... 50 7e-07
Medtr8g056860.1 | ATP-dependent zinc metalloprotease FTSH protei... 49 8e-07
Medtr3g092080.1 | P-loop nucleoside triphosphate hydrolase super... 48 2e-06
Medtr3g092080.2 | P-loop nucleoside triphosphate hydrolase super... 48 2e-06
Medtr3g092070.1 | P-loop nucleoside triphosphate hydrolase super... 48 2e-06
Medtr3g117230.1 | 26S proteasome regulatory particle triple-A AT... 47 3e-06
Medtr3g112260.1 | 26S proteasome regulatory particle triple-A AT... 47 3e-06
Medtr2g095210.1 | ATPase, AAA-type, CDC48 protein | HC | chr2:40... 47 6e-06
Medtr3g089100.1 | P-loop nucleoside triphosphate hydrolase super... 46 9e-06
Medtr3g089100.2 | P-loop nucleoside triphosphate hydrolase super... 46 1e-05
>Medtr4g096870.1 | katanin p60 ATPase subunit A-like protein | HC |
chr4:38556399-38563439 | 20130731
Length = 402
Score = 223 bits (567), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/126 (85%), Positives = 117/126 (92%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
MLRRLEKRILVPLPEPEAR AMFEELLP QPDEE +PYDLLV++TEGYSGSDIRLLCKE
Sbjct: 277 MLRRLEKRILVPLPEPEARRAMFEELLPLQPDEEPMPYDLLVDRTEGYSGSDIRLLCKET 336
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADY 120
AMQPLRRLM+QLEQ D+VPEEELPKVGP+ PED++AAL+NTRPSAHL AHKYD FNADY
Sbjct: 337 AMQPLRRLMTQLEQEPDVVPEEELPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADY 396
Query: 121 GSQILQ 126
GSQILQ
Sbjct: 397 GSQILQ 402
>Medtr7g075520.1 | AAA-type ATPase family protein | HC |
chr7:28282940-28277213 | 20130731
Length = 486
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 17/129 (13%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIP---YDLLVNQTEGYSGSDIRLLC 57
+LRRL KRI VPLP R + + L Q S+P ++LV +TEGYSGSD++ LC
Sbjct: 369 VLRRLVKRIYVPLPNENVRKLLLKHKLKGQA--FSLPSRDLEMLVRETEGYSGSDLQALC 426
Query: 58 KEVAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKY---D 114
+E AM P+R L S + + +V +R ED + A+ RPS L+ K+ +
Sbjct: 427 EEAAMMPIRELGSN-------ILTVKANQVRGLRYEDFKKAMAVIRPS--LNKSKWEELE 477
Query: 115 KFNADYGSQ 123
++N ++GS
Sbjct: 478 RWNEEFGSN 486
>Medtr6g023875.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr6:8418566-8425950 |
20130731
Length = 662
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQ-----PDEESIPYDLLVNQTEGYSGSDIRLLC 57
RRL KR+ +PLP EAR + LL +EE D++ N TEGYSGSD++ L
Sbjct: 541 RRLTKRLYIPLPSSEARAWIARSLLEKDGLFKLSNEE---IDIICNLTEGYSGSDMKNLV 597
Query: 58 KEVAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHA-HKYDKF 116
K+ ++ P+R Q+ Q +V E+ K+ P+ +D + +L+ RPS + Y+++
Sbjct: 598 KDASLGPIRE---QIRQGAKVVNLEK-EKIRPVTLQDFKISLQQVRPSVSPNELGTYEQW 653
Query: 117 NADYGS 122
N +GS
Sbjct: 654 NKQFGS 659
>Medtr6g023855.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr6:8401004-8396679 |
20130731
Length = 527
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 17/128 (13%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQ-----PDEESIPYDLLVNQTEGYSGSDIRLLC 57
RRL KR+ +PLP EAR + LL +EE +++ N TEGYSGSD++ L
Sbjct: 406 RRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKISNEE---MEIICNLTEGYSGSDMKNLV 462
Query: 58 KEVAMQPLRRLMSQLEQREDLVPEEELPK--VGPIRPEDIQAALKNTRPSAHLHA-HKYD 114
K+ +M PLR M EQ D++ EL K + P+ +D + +L+ RPS + ++
Sbjct: 463 KDASMGPLREAM---EQGIDIM---ELKKEDMRPVTLQDFKNSLQEIRPSVSPNELGTFE 516
Query: 115 KFNADYGS 122
++N +G+
Sbjct: 517 QWNKQFGT 524
>Medtr1g099470.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr1:44923426-44928509 |
20130731
Length = 750
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR ++RI+V LP E R + + LL + E+ I + L TEGYSGSD++ LC
Sbjct: 593 IIRRFQRRIMVGLPSAEKRETILKTLLAKEKHED-IDFKELSTMTEGYSGSDLKNLCTTA 651
Query: 61 AMQPLRRLMSQ 71
A +P++ LM Q
Sbjct: 652 AYRPIKELMQQ 662
>Medtr6g023845.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr6:8395160-8391790 |
20130731
Length = 369
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDE----ESIPYDLLVNQTEGYSGSDIRLLCK 58
RRL KR+ +PLP +AR + LL + DE + +++ + TEGYSGSD++ L K
Sbjct: 248 RRLTKRLYIPLPSSDARAWIARNLL--EKDELFKLSNEEMEIICDLTEGYSGSDMKNLVK 305
Query: 59 EVAMQPLRRLMSQLEQREDLVPEEELPK--VGPIRPEDIQAALKNTRPSAHLHA-HKYDK 115
+ +M PLR M EQ D++ EL K + P+ +D ++K+ R S + Y++
Sbjct: 306 DASMGPLREAM---EQGIDIM---ELKKEDIRPVTLQDFLNSMKDIRSSVSANELGIYEE 359
Query: 116 FNADYGS 122
+N +GS
Sbjct: 360 WNKQFGS 366
>Medtr8g099065.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr8:41595411-41588626 |
20130731
Length = 860
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E R + LL + ++ I + L T+GY+GSD++ LC
Sbjct: 693 IIRRFERRIMVGLPSVENREKILRTLLSKEKVDKEIDFKELATMTDGYTGSDLKNLCTTA 752
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPK 86
A +P+R L+ Q E+ +DL +++ K
Sbjct: 753 AYRPVRELIQQ-ERLKDLDKKQKATK 777
>Medtr5g009840.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:2485927-2491615 |
20130731
Length = 832
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E R + LL + + + L TEGYSGSD++ LC
Sbjct: 675 IIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTA 734
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 735 AYRPVRELIQQ 745
>Medtr6g033740.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr6:11098780-11092505 |
20130731
Length = 813
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E R + + L+ + E++ + L TEG+SGSD++ LC
Sbjct: 659 IIRRFERRIMVGLPSAENREMILKTLMSKEK-HENLDFKELATMTEGFSGSDLKNLCITA 717
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 718 AYRPVRELIQQ 728
>Medtr2g086160.1 | AAA-type ATPase family protein | HC |
chr2:36237293-36231516 | 20130731
Length = 438
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVA 61
RR +KRI +PLP+ +AR MF+ L P Y+ L ++TEG+SGSDI + K+V
Sbjct: 291 RRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDYEYLASRTEGFSGSDISVCVKDVL 350
Query: 62 MQPLRR 67
+P+R+
Sbjct: 351 FEPVRK 356
>Medtr1g088750.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:39724490-39713233 |
20130731
Length = 1194
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + +L + + + + N T+GYSGSD++ LC
Sbjct: 1049 VIRRLPRRLMVDLPDAPNRGKILRVILAKEDLAADVDLEAIANMTDGYSGSDLKNLCVTA 1108
Query: 61 AMQPLRRLMSQLEQREDLV-----PEEELPKVGPIRP---EDIQAA 98
A P+R ++ + ++ + L PE EL IRP ED + A
Sbjct: 1109 AHCPIREILEKEKKDKSLALAENKPEPELCSSADIRPLKMEDFRYA 1154
>Medtr1g099480.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:44931110-44937749 |
20130731
Length = 785
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR ++RI+V LP + R + + +L + E++ ++ L TEGYSGSD++ LC
Sbjct: 628 IIRRFQRRIMVGLPSADNRETILKTILAKE-KSENMNFEELSTMTEGYSGSDLKNLCMTA 686
Query: 61 AMQPLRRLMSQ 71
A +PL+ L+ Q
Sbjct: 687 AYRPLKELIQQ 697
>Medtr1g088750.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:39724490-39713166 |
20130731
Length = 1243
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + +L + + + + N T+GYSGSD++ LC
Sbjct: 1098 VIRRLPRRLMVDLPDAPNRGKILRVILAKEDLAADVDLEAIANMTDGYSGSDLKNLCVTA 1157
Query: 61 AMQPLRRLMSQLEQREDLV-----PEEELPKVGPIRP 92
A P+R ++ + ++ + L PE EL IRP
Sbjct: 1158 AHCPIREILEKEKKDKSLALAENKPEPELCSSADIRP 1194
>Medtr4g053350.1 | AAA-type ATPase family protein | HC |
chr4:19412309-19418075 | 20130731
Length = 433
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVA 61
RR +KRI +PLP+ +AR MF+ L P ++ L +TEG+SGSDI + K+V
Sbjct: 286 RRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEHLARKTEGFSGSDIAVCVKDVL 345
Query: 62 MQPLRR 67
+P+R+
Sbjct: 346 FEPVRK 351
>Medtr4g053350.2 | AAA-type ATPase family protein | HC |
chr4:19412330-19418075 | 20130731
Length = 435
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVA 61
RR +KRI +PLP+ +AR MF+ L P ++ L +TEG+SGSDI + K+V
Sbjct: 286 RRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEHLARKTEGFSGSDIAVCVKDVL 345
Query: 62 MQPLRR 67
+P+R+
Sbjct: 346 FEPVRK 351
>Medtr1g101870.1 | elongation factor 1-alpha | LC |
chr1:45981685-45990868 | 20130731
Length = 874
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR ++RI+V LP E R + + LL E+ I + L TEGYSGSD++ LC
Sbjct: 717 VIRRFQRRIMVGLPSAENRETILKTLLAKDKHED-IDFKELSTMTEGYSGSDLKNLCTTA 775
Query: 61 AMQPLRRL 68
A L+ L
Sbjct: 776 AYCALKEL 783
>Medtr1g101870.2 | elongation factor 1-alpha | LC |
chr1:45981685-45990868 | 20130731
Length = 822
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR ++RI+V LP E R + + LL E+ I + L TEGYSGSD++ LC
Sbjct: 665 VIRRFQRRIMVGLPSAENRETILKTLLAKDKHED-IDFKELSTMTEGYSGSDLKNLCTTA 723
Query: 61 AMQPLRRL 68
A L+ L
Sbjct: 724 AYCALKEL 731
>Medtr1g088730.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:39707851-39693314 |
20130731
Length = 1237
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + +L + + + L N T+GYSGSD++ LC
Sbjct: 1092 VIRRLPRRLMVNLPDAANREKIMRVILAKEELAPDVDLEALANMTDGYSGSDLKNLCVTA 1151
Query: 61 AMQPLRRLM--SQLEQREDLVPEEELPK------VGPIRPEDIQAA 98
A P+R ++ + E+ L + LP+ + P++ ED + A
Sbjct: 1152 AHCPIREILEKEKKERTSALAENKPLPRLCSSADIRPLKIEDFKYA 1197
>Medtr4g011810.1 | katanin p60 ATPase subunit-like protein | HC |
chr4:2991759-2987259 | 20130731
Length = 529
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAM 62
RRLEKRI +PLP E+R + L + D + +T+GYSG D+ +C++ ++
Sbjct: 408 RRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTDGYSGDDLTNVCRDASL 467
Query: 63 QPLRRLMSQLEQRE-DLVPEEELPKVGPIRPEDIQAAL-KNTRPSAHLHAHKYDKFNADY 120
+RR ++ + E + ++E+ K P+ D + AL K R + +++K+ ++
Sbjct: 468 NGMRRKIAGKTRDEIKSMSKDEISK-DPVAMCDFEEALVKVQRSVSPADIERHEKWFHEF 526
Query: 121 GS 122
GS
Sbjct: 527 GS 528
>Medtr6g023865.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein, putative | HC |
chr6:8406609-8410490 | 20130731
Length = 474
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQ-----PDEESIPYDLLVNQTEGYSGSDIRLLC 57
RRL KR+ +PLP +AR + LL +EE +++ + T+GYSG D+ L
Sbjct: 331 RRLTKRLYIPLPSSDARAWIARNLLEKDGLFKLSNEE---MEIIRDLTDGYSGLDMTNLV 387
Query: 58 KEVAMQPLRRLMSQLEQREDLVPEEELPK--VGPIRPEDIQAALKNTRPSA 106
K+ +M PLR M EQ D++ EL K + P+ +D +++ RPS
Sbjct: 388 KDASMGPLREAM---EQGIDIM---ELKKEDMRPVTLQDFMNSMQEIRPSV 432
>Medtr8g056860.1 | ATP-dependent zinc metalloprotease FTSH protein |
HC | chr8:18930054-18944115 | 20130731
Length = 988
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
R+++R+ + LP+ E R+ +F+ + E + + LV +T G+SG+DIR L E A+
Sbjct: 637 RIDRRLYIGLPDAEQRIKIFDVHSSGKQLGEDVNFTKLVFRTVGFSGADIRNLVNEAAIM 696
Query: 64 PLRRLMSQLEQRE--DLVPEEELPKVGPIRPEDIQ 96
+R ++ Q++ D++ ++ L +G + ED Q
Sbjct: 697 SVRNGHPKIFQQDITDVLDKQLLEGMGVLITEDEQ 731
>Medtr3g092080.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:42036583-42032399 |
20130731
Length = 390
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
+LRR + V +P+ + R + + +L + E++I + + +GY+GSD+ LCK+
Sbjct: 243 ILRRFPQAFEVGIPDQKERAEILKVILKGERVEDNIDFSYIAGLCKGYTGSDLFDLCKKA 302
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 106
A P+R L+ E + + P+ P+ D++ AL +R +A
Sbjct: 303 AYFPIRELLDD----EKKGKQSQEPR--PLSQFDLENALSTSRTTA 342
>Medtr3g092080.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:42036559-42031754 |
20130731
Length = 358
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
+LRR + V +P+ + R + + +L + E++I + + +GY+GSD+ LCK+
Sbjct: 243 ILRRFPQAFEVGIPDQKERAEILKVILKGERVEDNIDFSYIAGLCKGYTGSDLFDLCKKA 302
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 106
A P+R L+ E + + P+ P+ D++ AL +R +A
Sbjct: 303 AYFPIRELLDD----EKKGKQSQEPR--PLSQFDLENALSTSRTTA 342
>Medtr3g092070.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:42028881-42023454 |
20130731
Length = 385
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
+LRRL + + P+ + R + + +L + E++I + + +GY+GSD+ LCK+
Sbjct: 240 ILRRLPQAFEIGYPDRKERADILKVILKGEKVEDNIDFSYIAGLCKGYTGSDLFDLCKKA 299
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNA 118
A P+R ++ + E P+ P+ D++ AL +R ++ + A++Y + +
Sbjct: 300 AYFPIREILHNEKNGEQSCE----PR--PLSQADLEKALSTSRKTS-VAANEYSRMTS 350
>Medtr3g117230.1 | 26S proteasome regulatory particle triple-A
ATPase protein | HC | chr3:54844792-54841093 | 20130731
Length = 402
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
RL+++I +PLP ++R+ + + I Y+ +V EG++G+D+R +C E M
Sbjct: 303 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNICTEAGMS 362
Query: 64 PLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADYG 121
+R +R+ ++ E+ + V + K SAH +NAD+G
Sbjct: 363 AIR------AERDYVIHEDFMKAVRKL------TEAKKLEASAH--------YNADFG 400
>Medtr3g112260.1 | 26S proteasome regulatory particle triple-A
ATPase protein | HC | chr3:52567470-52563619 | 20130731
Length = 399
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
RL+++I +PLP ++R+ + + I Y+ +V EG++G+D+R +C E M
Sbjct: 300 RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS 359
Query: 64 PLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADYGSQ 123
+R +R+ ++ E+ + V + K SAH +NAD+G +
Sbjct: 360 AIR------AERDYVIHEDFMKAVRKLNEA------KKLESSAH--------YNADFGKE 399
>Medtr2g095210.1 | ATPase, AAA-type, CDC48 protein | HC |
chr2:40663648-40668479 | 20130731
Length = 734
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
RL++ I +PLP+ ++R ++F+ L P +++ L T+G+SG+DI +C+
Sbjct: 570 RLDQLIYIPLPDEDSRHSIFKSCLRKSPIAKNVDLGALARHTQGFSGADITEICQRACKY 629
Query: 64 PLR-RLMSQLEQR-----------EDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHA 110
+R + +EQ EDLV E V I+ + ++K R S +
Sbjct: 630 AIRENIEKDIEQERKRKENPEGMDEDLVDE----IVAEIKAAHFEESMKYARRSVSDADI 685
Query: 111 HKYDKF 116
KY F
Sbjct: 686 RKYQAF 691
>Medtr3g089100.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein, putative | HC |
chr3:33915623-33929519 | 20130731
Length = 1236
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + + +L + + + N T+GYSGSD++ LC
Sbjct: 1091 VIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLGAIANMTDGYSGSDLKNLCVTA 1150
Query: 61 AMQP 64
A +P
Sbjct: 1151 AHRP 1154
>Medtr3g089100.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein, putative | HC |
chr3:33915693-33929519 | 20130731
Length = 1207
Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + + +L + + + N T+GYSGSD++ LC
Sbjct: 1062 VIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLGAIANMTDGYSGSDLKNLCVTA 1121
Query: 61 AMQP 64
A +P
Sbjct: 1122 AHRP 1125