Miyakogusa Predicted Gene

Lj6g3v0183700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0183700.1 Non Characterized Hit- tr|D8SZV7|D8SZV7_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,61.25,3e-16,DUF155,Protein of unknown function DUF155;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Protein of
unkn,gene.g63919.t1.1
         (80 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g049180.1 | DUF155 family protein | HC | chr1:18993014-190...   162   7e-41
Medtr5g043180.1 | DUF155 family protein | HC | chr5:18969220-189...   120   3e-28

>Medtr1g049180.1 | DUF155 family protein | HC |
           chr1:18993014-19002205 | 20130731
          Length = 406

 Score =  162 bits (410), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 80/80 (100%), Positives = 80/80 (100%)

Query: 1   MLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQL 60
           MLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQL
Sbjct: 244 MLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQL 303

Query: 61  VGKANSNLADVILKLGLFER 80
           VGKANSNLADVILKLGLFER
Sbjct: 304 VGKANSNLADVILKLGLFER 323


>Medtr5g043180.1 | DUF155 family protein | HC |
           chr5:18969220-18974988 | 20130731
          Length = 412

 Score =  120 bits (301), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/80 (75%), Positives = 66/80 (82%)

Query: 1   MLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQL 60
           +L+ LD DGIR IGSVLGQSIALDY+  QVDG+V EF  INR ME TG F M +KKL QL
Sbjct: 250 VLKSLDTDGIRLIGSVLGQSIALDYFVSQVDGLVEEFAGINRGMEKTGTFTMDKKKLLQL 309

Query: 61  VGKANSNLADVILKLGLFER 80
           VGKANSNLADVILK+GLFER
Sbjct: 310 VGKANSNLADVILKVGLFER 329