Miyakogusa Predicted Gene

Lj6g3v0183570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0183570.1 Non Characterized Hit- tr|A5BFT3|A5BFT3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.89,0.000000000000004,seg,NULL,gene.g63918.t1.1
         (332 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g032530.1 | hypothetical protein | LC | chr5:13966823-1396...    71   1e-12
Medtr7g068020.1 | hypothetical protein | LC | chr7:24852784-2485...    57   3e-08
Medtr1g081820.1 | hypothetical protein | LC | chr1:36426083-3642...    54   2e-07

>Medtr5g032530.1 | hypothetical protein | LC |
           chr5:13966823-13969128 | 20130731
          Length = 196

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 222 HTSLTLRNLLYVPSITTNLVSVSQFARDNRVFFEFHLYVCLVKSQETNQVLLQGCLDSDG 281
           H SL L NLL VPSIT N + VS+F+RDN V+F+F+    LVKSQET  +LLQ CL   G
Sbjct: 61  HMSLVLHNLLRVPSITINFIRVSRFSRDNNVYFQFNANESLVKSQETGDILLQECL--IG 118

Query: 282 LYKFSDFKFTHLCSSP 297
                 F + +  +SP
Sbjct: 119 ANSHRGFNWKNWNNSP 134


>Medtr7g068020.1 | hypothetical protein | LC |
           chr7:24852784-24852237 | 20130731
          Length = 122

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 32/48 (66%)

Query: 243 VSQFARDNRVFFEFHLYVCLVKSQETNQVLLQGCLDSDGLYKFSDFKF 290
           V++FA D+ V FE H   C +KSQ +NQVLL+G +  D LYKF  FK 
Sbjct: 75  VTKFAHDDNVLFELHAQKCFIKSQASNQVLLEGAVGLDCLYKFKPFKL 122


>Medtr1g081820.1 | hypothetical protein | LC |
           chr1:36426083-36425363 | 20130731
          Length = 229

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 177 HVTADIQSFQHLTPFEGPDLLYRFTVRIFQILTVXXXXXXXXXNPHTSLT---LRNLLYV 233
           HVT + QS Q   PFEGPD ++   +   Q L +         +P  S+T   L N L+V
Sbjct: 154 HVTNNSQSIQQCVPFEGPDQIF---IGNGQDLKIHSSGSSRFNSPSQSITSHFLHNFLHV 210

Query: 234 PSITTNLVSVSQFARDNR 251
           PSIT NL+SVS+F ++ R
Sbjct: 211 PSITKNLISVSKFDKELR 228