Miyakogusa Predicted Gene

Lj6g3v0156160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0156160.1 Non Characterized Hit- tr|C5XFX8|C5XFX8_SORBI
Putative uncharacterized protein Sb03g030360
OS=Sorghu,40,4e-19,Pterin_4a,Transcriptional coactivator/pterin
dehydratase; no description,Transcriptional coactivator,CUFF.57561.1
         (209 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g048970.1 | pterin-4-alpha-carbinolamine dehydratase | HC ...   280   5e-76
Medtr5g019990.1 | pterin-4-alpha-carbinolamine dehydratase | HC ...   102   3e-22
Medtr5g019990.2 | pterin-4-alpha-carbinolamine dehydratase | HC ...    79   3e-15

>Medtr1g048970.1 | pterin-4-alpha-carbinolamine dehydratase | HC |
           chr1:18918602-18921746 | 20130731
          Length = 212

 Score =  280 bits (717), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 130/170 (76%), Positives = 153/170 (90%)

Query: 40  VRVDANDFLGDFGARDPFPAEIESQFGDKVLGNNDTEHKILIPNIAALSLSQQNCTPVSP 99
           +R  ANDFLGDFGARDPFPAE+ESQFG+KV+G+ +TEHKILIPNI+ALSLSQQ CTP+SP
Sbjct: 43  LRSLANDFLGDFGARDPFPAELESQFGEKVIGSYNTEHKILIPNISALSLSQQECTPISP 102

Query: 100 LQHPISEDDASKLLRKVVGWRLVHEESGLKLQCLWKLRDFKSGVELINRISKVVEAEGHF 159
           LQ+P+S+DDA++L+RKV+GWRLV++E  LKL+CLWKL+DFK GVELINRIS VVE  GHF
Sbjct: 103 LQNPLSQDDANQLIRKVLGWRLVNDEGILKLRCLWKLKDFKCGVELINRISTVVETAGHF 162

Query: 160 PNIHLEQPNQIRAVLWTASIGGLSMNDFVVAAKIGEIKTSDLAPKKRVWA 209
           PNIH+EQPN +RA LWT SIGGLSMNDF+VAAKI  IKTSDL P+KR WA
Sbjct: 163 PNIHIEQPNLVRAELWTTSIGGLSMNDFIVAAKIDAIKTSDLIPRKRAWA 212


>Medtr5g019990.1 | pterin-4-alpha-carbinolamine dehydratase | HC |
           chr5:7585366-7588649 | 20130731
          Length = 187

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 10/153 (6%)

Query: 63  SQFGDKVLGNNDTEHKIL---------IPNIAALSLSQQNCTPVSPLQ-HPISEDDASKL 112
           SQF  K   +++T H  +          PN  +  LS + C P +     P+++D A+ L
Sbjct: 32  SQFSPKRFMDSNTHHNQIPVSSLTTFSTPNKDSNDLSTKTCVPCNAKDLQPMTQDAANAL 91

Query: 113 LRKVVGWRLVHEESGLKLQCLWKLRDFKSGVELINRISKVVEAEGHFPNIHLEQPNQIRA 172
           + +V  W LV+E   LKL   WK++ F  G+E    I+ + EAEGH P++HL   N +  
Sbjct: 92  IAQVSDWNLVNESGTLKLSRSWKVKSFNKGLEFFRIIADLAEAEGHHPDLHLVGWNNVTV 151

Query: 173 VLWTASIGGLSMNDFVVAAKIGEIKTSDLAPKK 205
            +WT S+GGL+ NDF++AAKI E+    L  +K
Sbjct: 152 EIWTHSVGGLTENDFILAAKINELNVHGLLRRK 184


>Medtr5g019990.2 | pterin-4-alpha-carbinolamine dehydratase | HC |
           chr5:7585366-7587289 | 20130731
          Length = 176

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 10/128 (7%)

Query: 63  SQFGDKVLGNNDTEHKIL---------IPNIAALSLSQQNCTPVSPLQ-HPISEDDASKL 112
           SQF  K   +++T H  +          PN  +  LS + C P +     P+++D A+ L
Sbjct: 32  SQFSPKRFMDSNTHHNQIPVSSLTTFSTPNKDSNDLSTKTCVPCNAKDLQPMTQDAANAL 91

Query: 113 LRKVVGWRLVHEESGLKLQCLWKLRDFKSGVELINRISKVVEAEGHFPNIHLEQPNQIRA 172
           + +V  W LV+E   LKL   WK++ F  G+E    I+ + EAEGH P++HL   N +  
Sbjct: 92  IAQVSDWNLVNESGTLKLSRSWKVKSFNKGLEFFRIIADLAEAEGHHPDLHLVGWNNVTV 151

Query: 173 VLWTASIG 180
            +WT S+G
Sbjct: 152 EIWTHSVG 159