Miyakogusa Predicted Gene

Lj6g3v0156070.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0156070.2 Non Characterized Hit- tr|D7KTV1|D7KTV1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.71,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.57643.2
         (252 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g086250.2 | squamosa promoter-binding-like protein | HC | ...   397   e-111
Medtr1g086250.1 | squamosa promoter-binding-like protein | HC | ...   396   e-111
Medtr7g110320.1 | squamosa promoter-binding-like protein | HC | ...   386   e-108
Medtr7g110320.2 | squamosa promoter-binding-like protein | HC | ...   386   e-107
Medtr2g046550.1 | squamosa promoter-binding-like protein | HC | ...   195   3e-50
Medtr2g046550.3 | squamosa promoter-binding-like protein | HC | ...   195   3e-50
Medtr2g046550.2 | squamosa promoter-binding-like protein | HC | ...   195   3e-50
Medtr2g046550.4 | squamosa promoter-binding-like protein | HC | ...   195   3e-50
Medtr1g035010.1 | squamosa promoter-binding-like protein | HC | ...    99   5e-21
Medtr2g020620.2 | squamosa promoter-binding-like protein | HC | ...    69   3e-12
Medtr2g020620.1 | squamosa promoter-binding-like protein | HC | ...    69   3e-12
Medtr2g020620.3 | squamosa promoter-binding-like protein | HC | ...    69   4e-12

>Medtr1g086250.2 | squamosa promoter-binding-like protein | HC |
           chr1:38604301-38611936 | 20130731
          Length = 811

 Score =  397 bits (1019), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 208/244 (85%), Gaps = 1/244 (0%)

Query: 1   MVPTLLSNGSQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAY 60
           MV  L SNGSQGSPT I QHQ VSMN+MQQE+VH HD R +D QL+S IKPSISN+PPAY
Sbjct: 115 MVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAY 174

Query: 61  AEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPWTQQDSHQSSP 120
           +E RDS+ GQ KMNNFDLNDIY+DSDDG EDLERLP +TN  TSS+DYPWTQQDSHQSSP
Sbjct: 175 SETRDSS-GQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSP 233

Query: 121 PQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDI 180
            QTS N            +GEAQ RTDRIVFKLFGKEP++FPL+LRAQILDWLS SPTDI
Sbjct: 234 AQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPLVLRAQILDWLSQSPTDI 293

Query: 181 ESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAF 240
           ESYIRPGCIVLTIYLRQAEAVWEE+C DLTSSL +LLDVSDDTFW+TGWVHIRVQHQMAF
Sbjct: 294 ESYIRPGCIVLTIYLRQAEAVWEELCCDLTSSLIKLLDVSDDTFWKTGWVHIRVQHQMAF 353

Query: 241 IFNG 244
           IFNG
Sbjct: 354 IFNG 357


>Medtr1g086250.1 | squamosa promoter-binding-like protein | HC |
           chr1:38604282-38611936 | 20130731
          Length = 1003

 Score =  396 bits (1018), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 208/244 (85%), Gaps = 1/244 (0%)

Query: 1   MVPTLLSNGSQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAY 60
           MV  L SNGSQGSPT I QHQ VSMN+MQQE+VH HD R +D QL+S IKPSISN+PPAY
Sbjct: 307 MVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAY 366

Query: 61  AEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPWTQQDSHQSSP 120
           +E RDS+ GQ KMNNFDLNDIY+DSDDG EDLERLP +TN  TSS+DYPWTQQDSHQSSP
Sbjct: 367 SETRDSS-GQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSP 425

Query: 121 PQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDI 180
            QTS N            +GEAQ RTDRIVFKLFGKEP++FPL+LRAQILDWLS SPTDI
Sbjct: 426 AQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPLVLRAQILDWLSQSPTDI 485

Query: 181 ESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAF 240
           ESYIRPGCIVLTIYLRQAEAVWEE+C DLTSSL +LLDVSDDTFW+TGWVHIRVQHQMAF
Sbjct: 486 ESYIRPGCIVLTIYLRQAEAVWEELCCDLTSSLIKLLDVSDDTFWKTGWVHIRVQHQMAF 545

Query: 241 IFNG 244
           IFNG
Sbjct: 546 IFNG 549


>Medtr7g110320.1 | squamosa promoter-binding-like protein | HC |
           chr7:45220920-45210190 | 20130731
          Length = 1001

 Score =  386 bits (992), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/244 (75%), Positives = 203/244 (83%)

Query: 1   MVPTLLSNGSQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAY 60
           MV TL++NGSQGSPT   Q+QTVS++++Q +V+H+HDAR  DQQ     KP +SN+PPAY
Sbjct: 305 MVSTLVTNGSQGSPTVTVQNQTVSISEIQHQVMHSHDARVADQQTTFSAKPGVSNSPPAY 364

Query: 61  AEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPWTQQDSHQSSP 120
           +EARDSTAGQ KMN+FDLNDIYIDSDDGIED+ERLP TTN   SSLDYPW QQDSHQSSP
Sbjct: 365 SEARDSTAGQTKMNDFDLNDIYIDSDDGIEDIERLPVTTNLGASSLDYPWMQQDSHQSSP 424

Query: 121 PQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDI 180
           PQTS N            TGE Q RTDRIVFKLFGK P DFPL+L+AQILDWLSHSPTDI
Sbjct: 425 PQTSGNSDSASAQSPSSSTGETQNRTDRIVFKLFGKGPGDFPLVLKAQILDWLSHSPTDI 484

Query: 181 ESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAF 240
           E YIRPGC+VLTIYLRQAE VWEE+C+DLTSSL RLL VSDD FWRTGWVHIRVQHQMAF
Sbjct: 485 EGYIRPGCVVLTIYLRQAEVVWEELCFDLTSSLNRLLGVSDDDFWRTGWVHIRVQHQMAF 544

Query: 241 IFNG 244
           IFNG
Sbjct: 545 IFNG 548


>Medtr7g110320.2 | squamosa promoter-binding-like protein | HC |
           chr7:45220920-45211089 | 20130731
          Length = 860

 Score =  386 bits (991), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/244 (75%), Positives = 203/244 (83%)

Query: 1   MVPTLLSNGSQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAY 60
           MV TL++NGSQGSPT   Q+QTVS++++Q +V+H+HDAR  DQQ     KP +SN+PPAY
Sbjct: 305 MVSTLVTNGSQGSPTVTVQNQTVSISEIQHQVMHSHDARVADQQTTFSAKPGVSNSPPAY 364

Query: 61  AEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPWTQQDSHQSSP 120
           +EARDSTAGQ KMN+FDLNDIYIDSDDGIED+ERLP TTN   SSLDYPW QQDSHQSSP
Sbjct: 365 SEARDSTAGQTKMNDFDLNDIYIDSDDGIEDIERLPVTTNLGASSLDYPWMQQDSHQSSP 424

Query: 121 PQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDI 180
           PQTS N            TGE Q RTDRIVFKLFGK P DFPL+L+AQILDWLSHSPTDI
Sbjct: 425 PQTSGNSDSASAQSPSSSTGETQNRTDRIVFKLFGKGPGDFPLVLKAQILDWLSHSPTDI 484

Query: 181 ESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAF 240
           E YIRPGC+VLTIYLRQAE VWEE+C+DLTSSL RLL VSDD FWRTGWVHIRVQHQMAF
Sbjct: 485 EGYIRPGCVVLTIYLRQAEVVWEELCFDLTSSLNRLLGVSDDDFWRTGWVHIRVQHQMAF 544

Query: 241 IFNG 244
           IFNG
Sbjct: 545 IFNG 548


>Medtr2g046550.1 | squamosa promoter-binding-like protein | HC |
           chr2:20453789-20462574 | 20130731
          Length = 1025

 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 47  SYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERL-PGTTNHVTSS 105
           S + PS  + PP    A ++T G+ ++ N DLN++Y D  D +E+ E   P     V S 
Sbjct: 367 SNLVPSRGSLPPRPV-ATETTVGRNRLCNIDLNNVYDDGQDYVENPENSNPPLALGVESR 425

Query: 106 LDYPWTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLIL 165
               + Q +S +SSPPQTSRN            +GE Q RTDRIVFKLFGK+P+D P +L
Sbjct: 426 DHSSFVQYESLKSSPPQTSRNSDSTSTQSPSSSSGEGQSRTDRIVFKLFGKDPNDIPHVL 485

Query: 166 RAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFW 225
           R+Q+L WLS+SPT+IESYIRPGCI+LTI LR   + W+E+CY+L  SL +LL  S+D+ W
Sbjct: 486 RSQVLSWLSNSPTEIESYIRPGCIILTICLRLENSAWDELCYNLGPSLRKLLAASNDSLW 545

Query: 226 RTGWVHIRVQHQMAFIFNGLL 246
           RTGW++ RVQH +A ++NG L
Sbjct: 546 RTGWIYTRVQHSVAILYNGQL 566


>Medtr2g046550.3 | squamosa promoter-binding-like protein | HC |
           chr2:20453791-20462574 | 20130731
          Length = 790

 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 47  SYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERL-PGTTNHVTSS 105
           S + PS  + PP    A ++T G+ ++ N DLN++Y D  D +E+ E   P     V S 
Sbjct: 132 SNLVPSRGSLPPRPV-ATETTVGRNRLCNIDLNNVYDDGQDYVENPENSNPPLALGVESR 190

Query: 106 LDYPWTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLIL 165
               + Q +S +SSPPQTSRN            +GE Q RTDRIVFKLFGK+P+D P +L
Sbjct: 191 DHSSFVQYESLKSSPPQTSRNSDSTSTQSPSSSSGEGQSRTDRIVFKLFGKDPNDIPHVL 250

Query: 166 RAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFW 225
           R+Q+L WLS+SPT+IESYIRPGCI+LTI LR   + W+E+CY+L  SL +LL  S+D+ W
Sbjct: 251 RSQVLSWLSNSPTEIESYIRPGCIILTICLRLENSAWDELCYNLGPSLRKLLAASNDSLW 310

Query: 226 RTGWVHIRVQHQMAFIFNGLL 246
           RTGW++ RVQH +A ++NG L
Sbjct: 311 RTGWIYTRVQHSVAILYNGQL 331


>Medtr2g046550.2 | squamosa promoter-binding-like protein | HC |
           chr2:20453791-20462497 | 20130731
          Length = 790

 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 47  SYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERL-PGTTNHVTSS 105
           S + PS  + PP    A ++T G+ ++ N DLN++Y D  D +E+ E   P     V S 
Sbjct: 132 SNLVPSRGSLPPRPV-ATETTVGRNRLCNIDLNNVYDDGQDYVENPENSNPPLALGVESR 190

Query: 106 LDYPWTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLIL 165
               + Q +S +SSPPQTSRN            +GE Q RTDRIVFKLFGK+P+D P +L
Sbjct: 191 DHSSFVQYESLKSSPPQTSRNSDSTSTQSPSSSSGEGQSRTDRIVFKLFGKDPNDIPHVL 250

Query: 166 RAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFW 225
           R+Q+L WLS+SPT+IESYIRPGCI+LTI LR   + W+E+CY+L  SL +LL  S+D+ W
Sbjct: 251 RSQVLSWLSNSPTEIESYIRPGCIILTICLRLENSAWDELCYNLGPSLRKLLAASNDSLW 310

Query: 226 RTGWVHIRVQHQMAFIFNGLL 246
           RTGW++ RVQH +A ++NG L
Sbjct: 311 RTGWIYTRVQHSVAILYNGQL 331


>Medtr2g046550.4 | squamosa promoter-binding-like protein | HC |
           chr2:20453789-20462574 | 20130731
          Length = 790

 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 47  SYIKPSISNTPPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERL-PGTTNHVTSS 105
           S + PS  + PP    A ++T G+ ++ N DLN++Y D  D +E+ E   P     V S 
Sbjct: 132 SNLVPSRGSLPPRPV-ATETTVGRNRLCNIDLNNVYDDGQDYVENPENSNPPLALGVESR 190

Query: 106 LDYPWTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLIL 165
               + Q +S +SSPPQTSRN            +GE Q RTDRIVFKLFGK+P+D P +L
Sbjct: 191 DHSSFVQYESLKSSPPQTSRNSDSTSTQSPSSSSGEGQSRTDRIVFKLFGKDPNDIPHVL 250

Query: 166 RAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFW 225
           R+Q+L WLS+SPT+IESYIRPGCI+LTI LR   + W+E+CY+L  SL +LL  S+D+ W
Sbjct: 251 RSQVLSWLSNSPTEIESYIRPGCIILTICLRLENSAWDELCYNLGPSLRKLLAASNDSLW 310

Query: 226 RTGWVHIRVQHQMAFIFNGLL 246
           RTGW++ RVQH +A ++NG L
Sbjct: 311 RTGWIYTRVQHSVAILYNGQL 331


>Medtr1g035010.1 | squamosa promoter-binding-like protein | HC |
           chr1:12692334-12698670 | 20130731
          Length = 1003

 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 61/99 (61%)

Query: 141 EAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEA 200
           + Q RT RI+FKLF K PS FP  LR QI +WLS  P+D+ESYIRPGC+VL+IY   + A
Sbjct: 464 DTQDRTGRIMFKLFDKHPSHFPGTLRTQIYNWLSTRPSDLESYIRPGCVVLSIYASMSSA 523

Query: 201 VWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMA 239
            W ++  +    +  L+  SD  FWR G   +    Q+A
Sbjct: 524 AWVQLEENFLQRVDSLIHNSDSDFWRNGRFLVYSGSQLA 562


>Medtr2g020620.2 | squamosa promoter-binding-like protein | HC |
           chr2:6886221-6893834 | 20130731
          Length = 641

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 40/61 (65%)

Query: 142 AQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAV 201
           + C+T R+ FKL+   P++FP  LR QI  WL+  P ++E YIRPGC +LTI++     +
Sbjct: 164 SMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIM 223

Query: 202 W 202
           W
Sbjct: 224 W 224


>Medtr2g020620.1 | squamosa promoter-binding-like protein | HC |
           chr2:6886415-6893572 | 20130731
          Length = 745

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query: 142 AQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAV 201
           + C+T R+ FKL+   P++FP  LR QI  WL+  P ++E YIRPGC +LTI++     +
Sbjct: 268 SMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIM 327

Query: 202 WEEICYD 208
           W  +  D
Sbjct: 328 WINLLKD 334


>Medtr2g020620.3 | squamosa promoter-binding-like protein | HC |
           chr2:6886211-6893834 | 20130731
          Length = 477

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 144 CRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWE 203
           C+T R+ FKL+   P++FP  LR QI  WL+  P ++E YIRPGC +LTI++     +W 
Sbjct: 2   CQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIMWI 61

Query: 204 EICYD 208
            +  D
Sbjct: 62  NLLKD 66