Miyakogusa Predicted Gene

Lj6g3v0098570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0098570.1 Non Characterized Hit- tr|D4D6M8|D4D6M8_TRIVH
Putative uncharacterized protein OS=Trichophyton
verru,24.86,0.0002,coiled-coil,NULL; seg,NULL,CUFF.57498.1
         (227 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g046070.1 | hypothetical protein | HC | chr1:17342168-1734...   281   3e-76

>Medtr1g046070.1 | hypothetical protein | HC |
           chr1:17342168-17340141 | 20130731
          Length = 233

 Score =  281 bits (719), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 152/221 (68%), Positives = 170/221 (76%), Gaps = 5/221 (2%)

Query: 1   MGGTVS-----KGERKCSEKHVMNLKEKVRLLQEEIKEMMXXXXXXXXXXXXDIMVFTFK 55
           MGG VS     K E+K  + +VMNLKEKVRLLQEEIKE+M            +IMVF FK
Sbjct: 1   MGGCVSVSVKKKNEKKYPQNYVMNLKEKVRLLQEEIKEIMCDREKESRNYEREIMVFAFK 60

Query: 56  EADWKQXXXXXXXXXXQLRNLVXXXXXXXXXXXXLGMLEKNGEKEWELMGTKLLVQQMKE 115
           EADWKQ          +LR +V            +GM+EKN EKEWELMGTKLLVQ+MKE
Sbjct: 61  EADWKQEMKRLKEEVKELREVVEEKEEKIREMEEVGMVEKNCEKEWELMGTKLLVQEMKE 120

Query: 116 ERARRDEAVEKWKQLYLAIKTELDDLIQRTYDGDGLYWKAEENDIQMENLKKELYDKEET 175
           ERARRDEAVEKWKQLYLAIK ELDDLIQRTYDGDGLYWKAEENDIQ+ENLK+EL +KEE+
Sbjct: 121 ERARRDEAVEKWKQLYLAIKNELDDLIQRTYDGDGLYWKAEENDIQIENLKRELQEKEES 180

Query: 176 IKALKAQLVSMEKEKYKKEREFDLLRQSLRIMNGKKNSIQS 216
           IKALKAQL S+EKE+YK+EREFDLLRQSLRIMNGKKN IQ+
Sbjct: 181 IKALKAQLGSVEKERYKQEREFDLLRQSLRIMNGKKNPIQT 221