Miyakogusa Predicted Gene

Lj6g3v0085390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0085390.1 Non Characterized Hit- tr|K4BYD3|K4BYD3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,44.17,1e-18,seg,NULL,CUFF.57482.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086220.1 | hypothetical protein | HC | chr3:39010613-3901...   126   5e-30
Medtr3g086220.3 | hypothetical protein | HC | chr3:39010613-3901...   126   5e-30
Medtr3g086220.2 | hypothetical protein | HC | chr3:39010613-3901...   126   6e-30
Medtr2g036070.1 | hypothetical protein | HC | chr2:15304595-1530...    66   7e-12
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:...    58   2e-09

>Medtr3g086220.1 | hypothetical protein | HC |
           chr3:39010613-39016559 | 20130731
          Length = 1188

 Score =  126 bits (316), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 75/99 (75%), Gaps = 1/99 (1%)

Query: 24  VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
           VFIDTNLDTHLA+ V +HDTVSDLKK I SEH SCFPK G I IHGIKV R G+ Y LSD
Sbjct: 12  VFIDTNLDTHLALTVSDHDTVSDLKKLIVSEHASCFPKIGQIQIHGIKVKRNGHFYHLSD 71

Query: 84  SMSVTNAFNGFNDGWFLTVEASSLGEEATQSDQLITHAS 122
           SM V +AF G N  WFL+V+ S+L E++  +++L+ H S
Sbjct: 72  SMVVRSAFIGVNKSWFLSVDVSAL-EDSRPNEKLLPHGS 109


>Medtr3g086220.3 | hypothetical protein | HC |
           chr3:39010613-39016559 | 20130731
          Length = 1148

 Score =  126 bits (316), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 75/99 (75%), Gaps = 1/99 (1%)

Query: 24  VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
           VFIDTNLDTHLA+ V +HDTVSDLKK I SEH SCFPK G I IHGIKV R G+ Y LSD
Sbjct: 12  VFIDTNLDTHLALTVSDHDTVSDLKKLIVSEHASCFPKIGQIQIHGIKVKRNGHFYHLSD 71

Query: 84  SMSVTNAFNGFNDGWFLTVEASSLGEEATQSDQLITHAS 122
           SM V +AF G N  WFL+V+ S+L E++  +++L+ H S
Sbjct: 72  SMVVRSAFIGVNKSWFLSVDVSAL-EDSRPNEKLLPHGS 109


>Medtr3g086220.2 | hypothetical protein | HC |
           chr3:39010613-39016559 | 20130731
          Length = 1155

 Score =  126 bits (316), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 75/99 (75%), Gaps = 1/99 (1%)

Query: 24  VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
           VFIDTNLDTHLA+ V +HDTVSDLKK I SEH SCFPK G I IHGIKV R G+ Y LSD
Sbjct: 12  VFIDTNLDTHLALTVSDHDTVSDLKKLIVSEHASCFPKIGQIQIHGIKVKRNGHFYHLSD 71

Query: 84  SMSVTNAFNGFNDGWFLTVEASSLGEEATQSDQLITHAS 122
           SM V +AF G N  WFL+V+ S+L E++  +++L+ H S
Sbjct: 72  SMVVRSAFIGVNKSWFLSVDVSAL-EDSRPNEKLLPHGS 109


>Medtr2g036070.1 | hypothetical protein | HC |
           chr2:15304595-15307390 | 20130731
          Length = 381

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 41/84 (48%)

Query: 24  VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
           VF DTNL T +A     H T   LK+  E  H +C P  G I +HG+ V R    Y L D
Sbjct: 10  VFADTNLGTRIAFNAPSHITAGTLKRDFEQVHFTCLPDIGEIQVHGLMVKRKSCFYYLPD 69

Query: 84  SMSVTNAFNGFNDGWFLTVEASSL 107
           S+ +   F    + WFL VE   L
Sbjct: 70  SLPIRYVFPKMRETWFLHVEVGHL 93


>Medtr2g036080.1 | PPR containing plant-like protein | HC |
            chr2:15308501-15315184 | 20130731
          Length = 1388

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 37/75 (49%)

Query: 24   VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
            VF DT+L TH+A  V  H T   LK+     H +C P  G I +HG+ V R    Y L D
Sbjct: 1216 VFADTDLGTHIAFNVPPHITTGALKRDFVKVHFTCLPDIGEIQVHGLMVKRKSSFYYLPD 1275

Query: 84   SMSVTNAFNGFNDGW 98
            S+ +   F    D W
Sbjct: 1276 SLPIKYVFPKTRDTW 1290