Miyakogusa Predicted Gene

Lj6g3v0084290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0084290.1 Non Characterized Hit- tr|E1ZCC1|E1ZCC1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,33.59,0.000000000002,VACUOLAR MEMBRANE PROTEIN PEP5, 11,NULL;
VACUOLAR MEMBRANE PROTEIN RELATED,NULL,CUFF.57490.1
         (300 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g019500.2 | vacuolar protein sorting-associated-like prote...   502   e-142
Medtr1g019500.1 | vacuolar protein sorting-associated-like prote...   502   e-142

>Medtr1g019500.2 | vacuolar protein sorting-associated-like protein
           | HC | chr1:5894248-5901376 | 20130731
          Length = 852

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/297 (81%), Positives = 259/297 (87%), Gaps = 15/297 (5%)

Query: 1   MYVAKKAGRHEWYLKILLEDLGRYEEALGYISGLESSQAGMTIKEYGKTLIEHMPVETIQ 60
           MYVAKKAGRHEWYLKILLEDLG YEEAL YIS LESSQAGMTIKEYGK LIEH P ETIQ
Sbjct: 381 MYVAKKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEYGKILIEHKPSETIQ 440

Query: 61  ILIRLCTEDGDKRPHSNGLYVSMLPSPVDFLSIFVHHPQSLMEFLEKYTNKVKDSPAQVE 120
           ILIRLCT++GDKR HSNG+YVSMLPSPVDFLSIFVHHP SLM+FLEKYTNKVKDSPAQVE
Sbjct: 441 ILIRLCTDEGDKRGHSNGVYVSMLPSPVDFLSIFVHHPHSLMDFLEKYTNKVKDSPAQVE 500

Query: 121 INNTLLELYISNELNFPSISQVNEGGGYLNGASSKSMNLRAQPNGS-------------- 166
           INNTLLELYISNELNFPS+SQ NEG  YLN AS K+  +  Q NG+              
Sbjct: 501 INNTLLELYISNELNFPSVSQSNEGADYLNVASEKTSKISVQTNGTISDHKSSKKEKGRL 560

Query: 167 -RREKGLCMLKSAWPPEAEHPLYDVDLAIILCEMNAFREGLMYLYEKMKLYKEVIACYMQ 225
            RREKGL MLKSAWPPE EHPLYDVDLAIILCEMN+F++GL+YLYEKMKLYKEVIACYMQ
Sbjct: 561 ERREKGLHMLKSAWPPETEHPLYDVDLAIILCEMNSFKDGLLYLYEKMKLYKEVIACYMQ 620

Query: 226 SRDHEGLIACCKRLGDSVKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIERDDII 282
           + DH GLIACCKRLGDSVKGGDPSLWAD+LKYFGELGEDCSKEVKEVL YIERD+I+
Sbjct: 621 AHDHNGLIACCKRLGDSVKGGDPSLWADVLKYFGELGEDCSKEVKEVLNYIERDNIL 677


>Medtr1g019500.1 | vacuolar protein sorting-associated-like protein
           | HC | chr1:5893226-5901376 | 20130731
          Length = 968

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/297 (81%), Positives = 259/297 (87%), Gaps = 15/297 (5%)

Query: 1   MYVAKKAGRHEWYLKILLEDLGRYEEALGYISGLESSQAGMTIKEYGKTLIEHMPVETIQ 60
           MYVAKKAGRHEWYLKILLEDLG YEEAL YIS LESSQAGMTIKEYGK LIEH P ETIQ
Sbjct: 497 MYVAKKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEYGKILIEHKPSETIQ 556

Query: 61  ILIRLCTEDGDKRPHSNGLYVSMLPSPVDFLSIFVHHPQSLMEFLEKYTNKVKDSPAQVE 120
           ILIRLCT++GDKR HSNG+YVSMLPSPVDFLSIFVHHP SLM+FLEKYTNKVKDSPAQVE
Sbjct: 557 ILIRLCTDEGDKRGHSNGVYVSMLPSPVDFLSIFVHHPHSLMDFLEKYTNKVKDSPAQVE 616

Query: 121 INNTLLELYISNELNFPSISQVNEGGGYLNGASSKSMNLRAQPNGS-------------- 166
           INNTLLELYISNELNFPS+SQ NEG  YLN AS K+  +  Q NG+              
Sbjct: 617 INNTLLELYISNELNFPSVSQSNEGADYLNVASEKTSKISVQTNGTISDHKSSKKEKGRL 676

Query: 167 -RREKGLCMLKSAWPPEAEHPLYDVDLAIILCEMNAFREGLMYLYEKMKLYKEVIACYMQ 225
            RREKGL MLKSAWPPE EHPLYDVDLAIILCEMN+F++GL+YLYEKMKLYKEVIACYMQ
Sbjct: 677 ERREKGLHMLKSAWPPETEHPLYDVDLAIILCEMNSFKDGLLYLYEKMKLYKEVIACYMQ 736

Query: 226 SRDHEGLIACCKRLGDSVKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIERDDII 282
           + DH GLIACCKRLGDSVKGGDPSLWAD+LKYFGELGEDCSKEVKEVL YIERD+I+
Sbjct: 737 AHDHNGLIACCKRLGDSVKGGDPSLWADVLKYFGELGEDCSKEVKEVLNYIERDNIL 793