Miyakogusa Predicted Gene
- Lj6g3v0062040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0062040.1 Non Characterized Hit- tr|F6H3H2|F6H3H2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.83,1e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; FAMILY NOT NAMED,NULL; PPR: pentatrico,CUFF.57465.1
(411 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 645 0.0
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 195 6e-50
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 188 7e-48
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 188 7e-48
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 187 1e-47
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 187 1e-47
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 176 5e-44
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 175 9e-44
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 168 7e-42
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 165 6e-41
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 160 2e-39
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 159 3e-39
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 159 3e-39
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 157 1e-38
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 156 3e-38
Medtr3g052720.1 | organelle transcript processing protein, putat... 156 4e-38
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 5e-38
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 154 1e-37
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 154 1e-37
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 152 5e-37
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 152 8e-37
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 151 1e-36
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 151 1e-36
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 150 2e-36
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 148 1e-35
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 148 1e-35
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 147 3e-35
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 146 3e-35
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 145 7e-35
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 145 7e-35
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 144 2e-34
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 144 2e-34
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 144 2e-34
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 144 2e-34
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 143 2e-34
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 143 3e-34
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 142 5e-34
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 142 8e-34
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 141 1e-33
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 141 1e-33
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 141 1e-33
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 141 1e-33
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 140 2e-33
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 140 2e-33
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 140 2e-33
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 140 3e-33
Medtr5g006420.1 | organelle transcript processing protein, putat... 139 4e-33
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 5e-33
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 139 6e-33
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 138 8e-33
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 138 9e-33
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 138 1e-32
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 138 1e-32
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 1e-32
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 2e-32
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 3e-32
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 136 4e-32
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 4e-32
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 4e-32
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 6e-32
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 135 8e-32
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 135 9e-32
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 133 4e-31
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 132 5e-31
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 132 6e-31
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 132 6e-31
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 132 6e-31
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 1e-30
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 1e-30
Medtr4g113830.1 | organelle transcript processing protein, putat... 131 1e-30
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 1e-30
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 130 2e-30
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 130 2e-30
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 130 2e-30
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 130 3e-30
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 129 4e-30
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 129 5e-30
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 129 6e-30
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 129 7e-30
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 128 9e-30
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 128 1e-29
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 128 1e-29
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 127 2e-29
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 127 2e-29
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 127 2e-29
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 127 2e-29
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 127 3e-29
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 127 3e-29
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 127 3e-29
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 127 3e-29
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 126 3e-29
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 126 4e-29
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 126 5e-29
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 126 5e-29
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 125 5e-29
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 125 6e-29
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 125 6e-29
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 125 7e-29
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 125 8e-29
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 125 8e-29
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 125 9e-29
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 1e-28
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 1e-28
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 124 2e-28
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 124 2e-28
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 124 2e-28
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 124 2e-28
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 124 2e-28
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 2e-28
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 124 2e-28
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 124 2e-28
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 124 2e-28
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 3e-28
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 3e-28
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 4e-28
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 6e-28
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 121 1e-27
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 121 1e-27
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 120 2e-27
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 120 3e-27
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 120 3e-27
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 5e-27
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 119 6e-27
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 6e-27
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 8e-27
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 118 9e-27
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 117 3e-26
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 117 3e-26
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 116 3e-26
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 116 4e-26
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 116 4e-26
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 115 6e-26
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 6e-26
Medtr3g117150.1 | organelle transcript processing protein, putat... 115 7e-26
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 1e-25
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 1e-25
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 114 2e-25
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 113 3e-25
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 113 3e-25
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 3e-25
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 112 5e-25
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 6e-25
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 7e-25
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 112 7e-25
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 7e-25
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 8e-25
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 9e-25
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 111 1e-24
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 111 2e-24
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 111 2e-24
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 2e-24
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 2e-24
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 110 2e-24
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 2e-24
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 110 2e-24
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 110 3e-24
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 110 4e-24
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 4e-24
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 109 4e-24
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 5e-24
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 5e-24
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 7e-24
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 108 8e-24
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 1e-23
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 108 1e-23
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 1e-23
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 108 1e-23
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 107 3e-23
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 107 3e-23
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 3e-23
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 3e-23
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 3e-23
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 107 3e-23
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 106 3e-23
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 106 3e-23
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 106 3e-23
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 4e-23
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 106 5e-23
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 6e-23
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 9e-23
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 1e-22
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 104 1e-22
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 104 1e-22
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 104 2e-22
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 104 2e-22
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 104 2e-22
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 103 2e-22
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 103 3e-22
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 103 4e-22
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 4e-22
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 103 4e-22
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 102 5e-22
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 5e-22
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 102 7e-22
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 102 7e-22
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 102 9e-22
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 102 9e-22
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 101 1e-21
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 101 1e-21
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 100 2e-21
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 100 3e-21
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 8e-21
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 99 8e-21
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 99 1e-20
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 99 1e-20
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 1e-20
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 98 1e-20
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 1e-20
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 98 1e-20
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 1e-20
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 98 1e-20
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 98 2e-20
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 3e-20
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 96 6e-20
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 96 6e-20
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 96 7e-20
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 96 7e-20
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 96 7e-20
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 96 8e-20
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 96 8e-20
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 1e-19
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 1e-19
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 95 1e-19
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 1e-19
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 2e-19
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 94 2e-19
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 94 2e-19
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 3e-19
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 93 5e-19
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 5e-19
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 92 7e-19
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 92 1e-18
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 91 2e-18
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 91 2e-18
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 91 2e-18
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 3e-18
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 3e-18
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 3e-18
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 90 4e-18
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 90 5e-18
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 89 5e-18
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 6e-18
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 8e-18
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 89 9e-18
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 2e-17
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 88 2e-17
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 88 2e-17
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 87 4e-17
Medtr1g059720.1 | organelle transcript processing protein, putat... 87 4e-17
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 6e-17
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 6e-17
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 8e-17
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 8e-17
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 9e-17
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 85 1e-16
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 85 1e-16
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 85 2e-16
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 84 2e-16
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 84 2e-16
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 84 2e-16
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-16
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-16
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 84 3e-16
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-16
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 3e-16
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 84 3e-16
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 4e-16
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 83 5e-16
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 83 5e-16
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 83 6e-16
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 6e-16
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 82 8e-16
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 9e-16
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 82 1e-15
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 1e-15
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 82 1e-15
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 82 1e-15
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 81 2e-15
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 81 2e-15
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 81 2e-15
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 81 2e-15
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 81 2e-15
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 81 2e-15
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 80 4e-15
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 80 4e-15
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 4e-15
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 80 4e-15
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 80 5e-15
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 80 5e-15
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 80 5e-15
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 80 5e-15
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 79 5e-15
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 6e-15
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 79 7e-15
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 79 7e-15
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 79 7e-15
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 79 9e-15
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 79 9e-15
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 79 9e-15
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 79 9e-15
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 9e-15
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 79 1e-14
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 79 1e-14
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 1e-14
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 79 1e-14
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 78 1e-14
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 2e-14
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 77 3e-14
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 77 4e-14
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 77 4e-14
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 4e-14
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 6e-14
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 76 6e-14
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 76 7e-14
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 76 8e-14
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 76 8e-14
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 76 8e-14
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 75 8e-14
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 1e-13
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 75 1e-13
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 75 1e-13
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 75 1e-13
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 75 1e-13
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 75 2e-13
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-13
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 74 3e-13
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 74 3e-13
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 4e-13
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 4e-13
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 73 4e-13
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 73 4e-13
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-13
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 73 5e-13
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 6e-13
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 73 6e-13
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 73 7e-13
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 8e-13
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 8e-13
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 72 9e-13
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 72 9e-13
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 72 1e-12
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 72 1e-12
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 72 1e-12
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 71 2e-12
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 2e-12
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 71 2e-12
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 71 2e-12
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 2e-12
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 3e-12
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 70 3e-12
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-12
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 70 5e-12
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 69 7e-12
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 69 9e-12
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 1e-11
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 1e-11
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 69 1e-11
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 69 1e-11
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 1e-11
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 68 1e-11
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 2e-11
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 67 2e-11
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 3e-11
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 3e-11
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 3e-11
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 67 4e-11
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 4e-11
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 67 5e-11
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 66 5e-11
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 6e-11
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 66 6e-11
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 66 6e-11
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 66 8e-11
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 8e-11
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 65 8e-11
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 9e-11
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 65 9e-11
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 65 1e-10
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-10
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 65 2e-10
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 2e-10
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 64 2e-10
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 3e-10
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 3e-10
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-10
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 63 4e-10
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 63 5e-10
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 63 6e-10
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 63 7e-10
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 63 7e-10
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 8e-10
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 62 8e-10
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 9e-10
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 62 1e-09
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 62 1e-09
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 62 1e-09
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 61 2e-09
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-09
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-09
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 4e-09
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 60 5e-09
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 60 5e-09
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 60 5e-09
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 60 5e-09
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 60 5e-09
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 6e-09
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 6e-09
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 59 6e-09
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 59 7e-09
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 59 7e-09
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 59 8e-09
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 59 1e-08
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 59 1e-08
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 59 1e-08
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 59 1e-08
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-08
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 58 2e-08
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 57 3e-08
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 57 3e-08
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 3e-08
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 3e-08
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 57 5e-08
Medtr5g043790.1 | PPR repeat protein | LC | chr5:19242401-192435... 57 5e-08
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 56 5e-08
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 56 6e-08
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 56 7e-08
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 7e-08
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 7e-08
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 56 7e-08
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 55 9e-08
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 55 1e-07
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 55 2e-07
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 55 2e-07
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 3e-07
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-07
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 54 3e-07
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 4e-07
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 53 5e-07
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 53 5e-07
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 53 5e-07
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 53 6e-07
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 53 6e-07
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 7e-07
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 9e-07
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 1e-06
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 52 1e-06
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 52 1e-06
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 51 2e-06
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 51 2e-06
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 51 2e-06
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 51 2e-06
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 51 2e-06
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/415 (72%), Positives = 355/415 (85%), Gaps = 4/415 (0%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
MD R +A +L QLNH S TQ +ARA+HAHILT+GF+ I NRLI+IYCKSSNI YA
Sbjct: 1 MDVRDLAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYAR 60
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
LFDK P PDI +RTTLLSAYS++GNVKLA++LFNATP+T+RDT+SYNAM+ AYSH DG
Sbjct: 61 KLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDG 120
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
HAA+ LFV+MKR GF PDPF+FS+VL A+SLIA+EE HCQ LHC+V+K G + +PSV N
Sbjct: 121 HAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNA 180
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
LLSCY+CCASS LV+S LMASARK+FDE P +Q EPSWTTMIAGYVRNDDL +AR+LL
Sbjct: 181 LLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELL 240
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA----SFNT 296
DG+T+PI VAWNAMISGYVR GLYEEAFDTFR+MHSMGIQ DEYTYTSLISA +
Sbjct: 241 DGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKM 300
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G+FNCGRQ+H Y+LRTVV+PS HF+LSVNNALITFYTK ++++AR VFDKMPVRD++SW
Sbjct: 301 GMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISW 360
Query: 357 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
NA+LSGY+NA+R+EEA IF E+PERN+LTWTVMISGLA++GFGEE LKLFNQMK
Sbjct: 361 NAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMK 415
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIY--CKSSNI-------PYAHHLFDKTPNPDIF--SRT 75
+H ++ G L P + N L+ Y C SS + A +FD+TP I+ S T
Sbjct: 162 LHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWT 221
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
T+++ Y ++ A +L + +T +++NAM+ Y A F RM G
Sbjct: 222 TMIAGYVRNDDLVAARELLDG--LTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGI 279
Query: 136 APDPFSFSTVLGAMSLIAEEE--WHC-QQLHCDVVKWGV----MCVPSVLNTLLSCYICC 188
D +++++++ A E+ ++C +Q+H +++ V V SV N L++ Y
Sbjct: 280 QEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFY--- 336
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
T + M AR++FD+ P+ +D SW +++GYV + A + M
Sbjct: 337 ---TKYDR---MIEARRVFDKMPV--RDIISWNAVLSGYVNAQRIEEANSIFSEMPERNV 388
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+ W MISG ++G EE F +M S G++ +Y + I+A G + G+Q+H+
Sbjct: 389 LTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQ 448
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
V+R LS NALIT Y++CG + A VF MP D VSWNA+++
Sbjct: 449 VIRLGHDSG----LSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGH 504
Query: 369 LEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
+A +F ++ + ++L T+ +++ +G +E F+ M
Sbjct: 505 GVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTM 550
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 213/405 (52%), Gaps = 21/405 (5%)
Query: 9 LFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN 68
++L Q S R IHA I+ G L+ + N L++ Y K+++ AH LF + P
Sbjct: 14 VYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQ 73
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
FS TLLS+Y+ GN++ A +LF+ P D++S+ M+ Y+ + A+ F
Sbjct: 74 RTTFSWNTLLSSYAKGGNIETARRLFDDIPEP--DSVSWTTMIVGYNQMGRFNTAIHTFQ 131
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
+M DG P F+F+ VL + + +++H VVK G+ V V N+LL+ Y+
Sbjct: 132 QMISDGILPTQFTFTNVLASCVATGSLDI-GKKVHSFVVKLGLSGVVPVANSLLNMYVKS 190
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
S V++ +FD L +D+ +W MI+ ++++ A L D MT
Sbjct: 191 GDSLRVKA---------VFDRMRL--RDKSTWNIMISMHMQSGRFDVALALFDQMTDRDI 239
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
++WN++I+GY G +A +TF M S ++ D++T S++SA N G+Q+HA
Sbjct: 240 ISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHA 299
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL--VSWNAILSGYIN 365
Y++R + S +V NALI+ Y K G + AR + + ++ +++ ++L+GY+
Sbjct: 300 YIVRADIDISG----AVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVK 355
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ A+ IF + R+++ WT MI G A++ +++L+LF M
Sbjct: 356 IGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLM 400
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 47/389 (12%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ + +H+ ++ G + N L+++Y KS + +FD+ D + ++S +
Sbjct: 160 IGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHM 219
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFS 141
+G +A LF+ +T RD IS+N+++ Y H A++ F M R PD F+
Sbjct: 220 QSGRFDVALALFD--QMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFT 277
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+VL A + + E +Q+H +V+ + +V N L+S Y A S VE
Sbjct: 278 LGSVLSACANL-ESLKLGKQIHAYIVRADIDISGAVGNALISMY---AKSGAVEV----- 328
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
AR + + S + ++T+++ GYV+ D+ AR++ D + VAW AMI GY ++
Sbjct: 329 -ARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQN 387
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
L ++A + FR M S G + + YT +++S + + G+QLHA +R S
Sbjct: 388 SLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSS---- 443
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
+SV NALIT Y+K G + AR+VF+++ E
Sbjct: 444 VSVGNALITMYSKSGCIKDARKVFNQI------------------------------CTE 473
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQM 410
R+ LTWT MI LA+ G G E+++LF M
Sbjct: 474 RDTLTWTSMIIALAQHGLGNEAIELFEDM 502
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+ L+ ++ + GR +HA +++ + H + + N L+ FY+K A +
Sbjct: 12 TFVYLLQSAIKSRDTVTGRFIHARIIKHGL----HLSVFLMNNLLNFYSKTASFNDAHRL 67
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
F +MP R SWN +LS Y +E A+ +F ++PE + ++WT MI G + G ++
Sbjct: 68 FSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAI 127
Query: 405 KLFNQM 410
F QM
Sbjct: 128 HTFQQM 133
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 202/369 (54%), Gaps = 28/369 (7%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T A+ +H+HI+ T + N LI Y K +IPYA +FD+ P+P+++S T+LSAY
Sbjct: 35 TKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAY 94
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF-VRMKRDG-FAPDP 139
S G V E LF+A P RD +S+N+++ Y+ + +VK + + +K DG F +
Sbjct: 95 SKLGRVSEMEYLFDAMP--RRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNR 152
Query: 140 FSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
+FST+L I + C +Q+H VVK+G M V + L+ Y
Sbjct: 153 ITFSTLL-----ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY---------S 198
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+++ ARK+FDE P +K+ + T+I G +R + +++L M +++W +MI
Sbjct: 199 KMGMISCARKVFDELP--EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G+ ++GL +A D FR+M +QMD+YT+ S+++A G+Q+HAY++RT +
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYK 316
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + V +AL+ Y KC + A VF KM +++VSW A+L GY EEA
Sbjct: 317 DN----IFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 372
Query: 376 FREVPERNL 384
F ++ + +
Sbjct: 373 FSDMQKYGI 381
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 53/392 (13%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH H++ GF + + L+D+Y K I A +FD+ P ++ TL+
Sbjct: 170 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 229
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ +++LF + RD+IS+ +M+ ++ N A+ +F MK + D ++F
Sbjct: 230 RCGRVEDSKRLF--FEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTF 287
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+VL A + + +Q+H +++ T + + +AS
Sbjct: 288 GSVLTACGCVMALQ-EGKQVHAYIIR-----------------------TDYKDNIFVAS 323
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A ++ Y + ++ SA + MT V+W AM+ GY ++G
Sbjct: 324 A-------------------LVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 364
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EEA TF M GI+ D++T S+IS+ N G Q HA L + + +
Sbjct: 365 YSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS----FI 420
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
+V+NAL+T Y KCG + + +F+++ +D V+W A++SGY + E +F +
Sbjct: 421 TVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAH 480
Query: 383 NL----LTWTVMISGLAESGFGEESLKLFNQM 410
L +T+ ++S + +G E+ ++F M
Sbjct: 481 GLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 512
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 17/254 (6%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+ LH ++K +LN L+S Y S + A K+FD+ P + S
Sbjct: 38 KNLHSHIIKTLPYPETFLLNNLISSYAKLGS---------IPYACKVFDQMP--HPNLYS 86
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSM 277
W T+++ Y + ++ L D M V+WN++ISGY GL ++ + M +
Sbjct: 87 WNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 146
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
++ T+++L+ + G GRQ+H +V++ + V + L+ Y+K G
Sbjct: 147 SFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMS----YVFVGSPLVDMYSKMGM 202
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+ AR+VFD++P +++V +N ++ G + R+E++K +F E+ ER+ ++WT MI+G ++
Sbjct: 203 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 262
Query: 398 GFGEESLKLFNQMK 411
G +++ +F +MK
Sbjct: 263 GLDRDAIDIFREMK 276
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 58/349 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+IF + L+ Y N+K AE +F +T ++ +S+ AM+ Y N AVK F
Sbjct: 318 NIFVASALVVMYCKCKNIKSAEAVFK--KMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 375
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M++ G PD F+ +V+ + + +A E Q H + G++ +V N L++ Y C
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLE-EGAQFHARALTSGLISFITVSNALVTLYGKCG 434
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + + +LF+E +S KDE +WT
Sbjct: 435 S---------IEDSHRLFNE--ISFKDEVTWT---------------------------- 455
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
A++SGY + G E F M + G++ D+ T+ ++SA GL G Q+ +
Sbjct: 456 ---ALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 512
Query: 310 LRTVVQPSEHFILSVNN---ALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG--- 362
+ +EH I+ + + +I +++ G++ +AR +KMP D +SW +LS
Sbjct: 513 I------NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 566
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y N + A E+ N ++ ++ S A G EE +L M+
Sbjct: 567 YGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMR 615
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 202/369 (54%), Gaps = 28/369 (7%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T A+ +H+HI+ T + N LI Y K +IPYA +FD+ P+P+++S T+LSAY
Sbjct: 35 TKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAY 94
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF-VRMKRDG-FAPDP 139
S G V E LF+A P RD +S+N+++ Y+ + +VK + + +K DG F +
Sbjct: 95 SKLGRVSEMEYLFDAMP--RRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNR 152
Query: 140 FSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
+FST+L I + C +Q+H VVK+G M V + L+ Y
Sbjct: 153 ITFSTLL-----ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY---------S 198
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+++ ARK+FDE P +K+ + T+I G +R + +++L M +++W +MI
Sbjct: 199 KMGMISCARKVFDELP--EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G+ ++GL +A D FR+M +QMD+YT+ S+++A G+Q+HAY++RT +
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYK 316
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + V +AL+ Y KC + A VF KM +++VSW A+L GY EEA
Sbjct: 317 DN----IFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 372
Query: 376 FREVPERNL 384
F ++ + +
Sbjct: 373 FSDMQKYGI 381
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 53/392 (13%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH H++ GF + + L+D+Y K I A +FD+ P ++ TL+
Sbjct: 170 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 229
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ +++LF + RD+IS+ +M+ ++ N A+ +F MK + D ++F
Sbjct: 230 RCGRVEDSKRLF--FEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTF 287
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+VL A + + +Q+H +++ T + + +AS
Sbjct: 288 GSVLTACGCVMALQ-EGKQVHAYIIR-----------------------TDYKDNIFVAS 323
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A ++ Y + ++ SA + MT V+W AM+ GY ++G
Sbjct: 324 A-------------------LVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 364
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EEA TF M GI+ D++T S+IS+ N G Q HA L + + +
Sbjct: 365 YSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS----FI 420
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
+V+NAL+T Y KCG + + +F+++ +D V+W A++SGY + E +F +
Sbjct: 421 TVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAH 480
Query: 383 NL----LTWTVMISGLAESGFGEESLKLFNQM 410
L +T+ ++S + +G E+ ++F M
Sbjct: 481 GLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 512
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 17/254 (6%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+ LH ++K +LN L+S Y S + A K+FD+ P + S
Sbjct: 38 KNLHSHIIKTLPYPETFLLNNLISSYAKLGS---------IPYACKVFDQMP--HPNLYS 86
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSM 277
W T+++ Y + ++ L D M V+WN++ISGY GL ++ + M +
Sbjct: 87 WNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 146
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
++ T+++L+ + G GRQ+H +V++ + V + L+ Y+K G
Sbjct: 147 SFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMS----YVFVGSPLVDMYSKMGM 202
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+ AR+VFD++P +++V +N ++ G + R+E++K +F E+ ER+ ++WT MI+G ++
Sbjct: 203 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 262
Query: 398 GFGEESLKLFNQMK 411
G +++ +F +MK
Sbjct: 263 GLDRDAIDIFREMK 276
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 58/349 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+IF + L+ Y N+K AE +F +T ++ +S+ AM+ Y N AVK F
Sbjct: 318 NIFVASALVVMYCKCKNIKSAEAVFK--KMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 375
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M++ G PD F+ +V+ + + +A E Q H + G++ +V N L++ Y C
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLE-EGAQFHARALTSGLISFITVSNALVTLYGKCG 434
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + + +LF+E +S KDE +WT
Sbjct: 435 S---------IEDSHRLFNE--ISFKDEVTWT---------------------------- 455
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
A++SGY + G E F M + G++ D+ T+ ++SA GL G Q+ +
Sbjct: 456 ---ALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 512
Query: 310 LRTVVQPSEHFILSVNN---ALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG--- 362
+ +EH I+ + + +I +++ G++ +AR +KMP D +SW +LS
Sbjct: 513 I------NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 566
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y N + A E+ N ++ ++ S A G EE +L M+
Sbjct: 567 YGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMR 615
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 201/369 (54%), Gaps = 28/369 (7%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T A+ +H+HI+ T + N LI Y K +IPYA +FD+ P+P+++S T+LSAY
Sbjct: 26 TKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAY 85
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF-VRMKRDG-FAPDP 139
S G V E LF+A P RD +S+N+++ Y+ + +VK + + +K DG +
Sbjct: 86 SKLGRVSEMEYLFDAMP--RRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNR 143
Query: 140 FSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
+FST+L I + C +Q+H VVK+G M V + L+ Y
Sbjct: 144 ITFSTLL-----ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY---------S 189
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+++ ARK+FDE P +K+ + T+I G +R + +++L M +++W +MI
Sbjct: 190 KMGMISCARKVFDELP--EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G+ ++GL +A D FR+M +QMD+YT+ S+++A G+Q+HAY++RT +
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + V +AL+ Y KC + A VF KM +++VSW A+L GY EEA
Sbjct: 308 DN----IFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 376 FREVPERNL 384
F ++ + +
Sbjct: 364 FSDMQKYGI 372
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 184/393 (46%), Gaps = 55/393 (13%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH H++ GF + + L+D+Y K I A +FD+ P ++ TL+
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ +++LF + RD+IS+ +M+ ++ N A+ +F MK + D ++F
Sbjct: 221 RCGRVEDSKRLF--FEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTF 278
Query: 143 STVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+VL A ++A +E +Q+H +++ T + + +A
Sbjct: 279 GSVLTACGGVMALQEG--KQVHAYIIR-----------------------TDYKDNIFVA 313
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
SA ++ Y + ++ SA + MT V+W AM+ GY ++
Sbjct: 314 SA-------------------LVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EEA TF M GI+ D++T S+IS+ N G Q HA L + +
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS----F 410
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
++V+NAL+T Y KCG + + +F+++ +D V+W A++SGY + E +F +
Sbjct: 411 ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLA 470
Query: 382 RNL----LTWTVMISGLAESGFGEESLKLFNQM 410
L +T+ ++S + +G E+ ++F M
Sbjct: 471 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 134/254 (52%), Gaps = 17/254 (6%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+ LH ++K +LN L+S Y S + A K+FD+ P + S
Sbjct: 29 KNLHSHIIKTLPYPETFLLNNLISSYAKLGS---------IPYASKVFDQMP--HPNLYS 77
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSM 277
W T+++ Y + ++ L D M V+WN++ISGY GL ++ + M +
Sbjct: 78 WNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 137
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
I ++ T+++L+ + G GRQ+H +V++ + V + L+ Y+K G
Sbjct: 138 SINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMS----YVFVGSPLVDMYSKMGM 193
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+ AR+VFD++P +++V +N ++ G + R+E++K +F E+ ER+ ++WT MI+G ++
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 398 GFGEESLKLFNQMK 411
G +++ +F +MK
Sbjct: 254 GLDRDAIDIFREMK 267
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 58/349 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+IF + L+ Y N+K AE +F +T ++ +S+ AM+ Y N AVK F
Sbjct: 309 NIFVASALVEMYCKCKNIKSAEAVFK--KMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M++ G PD F+ +V+ + + +A E Q H + G++ +V N L++ Y C
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLE-EGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + + +LF+E +S KDE +WT
Sbjct: 426 S---------IEDSHRLFNE--ISFKDEVTWT---------------------------- 446
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
A++SGY + G E F M + G++ D+ T+ ++SA GL G Q+ +
Sbjct: 447 ---ALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 310 LRTVVQPSEHFILSVNN---ALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG--- 362
+ +EH I+ + + +I +++ G++ +AR +KMP D +SW +LS
Sbjct: 504 I------NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 557
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y N + A E+ N ++ ++ S A G EE +L M+
Sbjct: 558 YGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMR 606
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 201/369 (54%), Gaps = 28/369 (7%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T A+ +H+HI+ T + N LI Y K +IPYA +FD+ P+P+++S T+LSAY
Sbjct: 26 TKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAY 85
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF-VRMKRDG-FAPDP 139
S G V E LF+A P RD +S+N+++ Y+ + +VK + + +K DG +
Sbjct: 86 SKLGRVSEMEYLFDAMP--RRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNR 143
Query: 140 FSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
+FST+L I + C +Q+H VVK+G M V + L+ Y
Sbjct: 144 ITFSTLL-----ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY---------S 189
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+++ ARK+FDE P +K+ + T+I G +R + +++L M +++W +MI
Sbjct: 190 KMGMISCARKVFDELP--EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G+ ++GL +A D FR+M +QMD+YT+ S+++A G+Q+HAY++RT +
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + V +AL+ Y KC + A VF KM +++VSW A+L GY EEA
Sbjct: 308 DN----IFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 376 FREVPERNL 384
F ++ + +
Sbjct: 364 FSDMQKYGI 372
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 184/393 (46%), Gaps = 55/393 (13%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH H++ GF + + L+D+Y K I A +FD+ P ++ TL+
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ +++LF + RD+IS+ +M+ ++ N A+ +F MK + D ++F
Sbjct: 221 RCGRVEDSKRLF--FEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTF 278
Query: 143 STVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+VL A ++A +E +Q+H +++ T + + +A
Sbjct: 279 GSVLTACGGVMALQEG--KQVHAYIIR-----------------------TDYKDNIFVA 313
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
SA ++ Y + ++ SA + MT V+W AM+ GY ++
Sbjct: 314 SA-------------------LVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EEA TF M GI+ D++T S+IS+ N G Q HA L + +
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS----F 410
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
++V+NAL+T Y KCG + + +F+++ +D V+W A++SGY + E +F +
Sbjct: 411 ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLA 470
Query: 382 RNL----LTWTVMISGLAESGFGEESLKLFNQM 410
L +T+ ++S + +G E+ ++F M
Sbjct: 471 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 134/254 (52%), Gaps = 17/254 (6%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+ LH ++K +LN L+S Y S + A K+FD+ P + S
Sbjct: 29 KNLHSHIIKTLPYPETFLLNNLISSYAKLGS---------IPYASKVFDQMP--HPNLYS 77
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSM 277
W T+++ Y + ++ L D M V+WN++ISGY GL ++ + M +
Sbjct: 78 WNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 137
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
I ++ T+++L+ + G GRQ+H +V++ + V + L+ Y+K G
Sbjct: 138 SINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMS----YVFVGSPLVDMYSKMGM 193
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+ AR+VFD++P +++V +N ++ G + R+E++K +F E+ ER+ ++WT MI+G ++
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 398 GFGEESLKLFNQMK 411
G +++ +F +MK
Sbjct: 254 GLDRDAIDIFREMK 267
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 58/349 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+IF + L+ Y N+K AE +F +T ++ +S+ AM+ Y N AVK F
Sbjct: 309 NIFVASALVEMYCKCKNIKSAEAVFK--KMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M++ G PD F+ +V+ + + +A E Q H + G++ +V N L++ Y C
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLE-EGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + + +LF+E +S KDE +WT
Sbjct: 426 S---------IEDSHRLFNE--ISFKDEVTWT---------------------------- 446
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
A++SGY + G E F M + G++ D+ T+ ++SA GL G Q+ +
Sbjct: 447 ---ALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 310 LRTVVQPSEHFILSVNN---ALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG--- 362
+ +EH I+ + + +I +++ G++ +AR +KMP D +SW +LS
Sbjct: 504 I------NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 557
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y N + A E+ N ++ ++ S A G EE +L M+
Sbjct: 558 YGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMR 606
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 189/388 (48%), Gaps = 20/388 (5%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R IH+ I G I+N LI++Y K +I A LFD D S ++S Y
Sbjct: 72 GRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVR 131
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G + A KLF+ P + +SY M+ + N A+++F M+ G P+ +
Sbjct: 132 NGQIDNARKLFDVMPN--KGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLV 189
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
V+ A S + E +C+ +H VVK V+ + V L+ Y C+ + A
Sbjct: 190 NVISACSHLGEV-LNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSG---------VREA 239
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
R+LFDE P +++ +W M+ GY + + AR+L DG+ ++W MI GY++ G
Sbjct: 240 RRLFDEMP--ERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGR 297
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
EA + +R M G +E +L+SA G QLH TVV+
Sbjct: 298 LREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHG----TVVKRGFDCYNF 353
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILSGYINARRLEEAKFIFREVPER 382
+ +I FY CG + A F+ + V+D L SWNA+ +G+I ++ A F ++ R
Sbjct: 354 IQTTIIYFYAACGMMDLACLQFE-VGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVR 412
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ +W+ MISG A+S + +L+LF++M
Sbjct: 413 DVFSWSTMISGYAQSEHPKMALELFHKM 440
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 177/398 (44%), Gaps = 34/398 (8%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
R +H ++ ++ L+ YC S + A LFD+ P ++ + +L+ Y+
Sbjct: 205 RMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G V A +LF+ + +D IS+ M+ Y A++++ M + G P+
Sbjct: 265 GLVDEARELFDG--ICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVN 322
Query: 145 VLGAMSLIAE--EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++ A + W QLH VVK G C + T++ Y C +M
Sbjct: 323 LVSACGRGTAIVDGW---QLHGTVVKRGFDCYNFIQTTIIYFYAACG---------MMDL 370
Query: 203 ARKLFDEAPLSQKDE-PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
A F+ + KD SW + AG+++N + A K D M +W+ MISGY +
Sbjct: 371 ACLQFE---VGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQS 427
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+ A + F KM + GI+ +E T S+ SA G G+ H Y +R+ P F
Sbjct: 428 EHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEY-MRSESIP---FN 483
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS----WNAILSGYINARRLEEAKFIFR 377
++ ALI Y KCG + A + F++ +RD VS WNAI+ G + +F
Sbjct: 484 DNLRAALIDMYAKCGSINSALQFFNQ--IRDEVSSVSPWNAIICGLASHGHASMCLEVFS 541
Query: 378 EVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ + N +T+ ++S +G E ++F MK
Sbjct: 542 DMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMK 579
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
GRQ+H+ + + + HF + N+LI Y KCG + A+ +FD D VS N ++S
Sbjct: 72 GRQIHSLIFKLGL----HFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVS 127
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
GY+ +++ A+ +F +P + +++T MI G ++GF E+L++F M+
Sbjct: 128 GYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMR 177
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 201/395 (50%), Gaps = 28/395 (7%)
Query: 24 ARAIHAHILTTGF-RLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ +H H+ TGF R T LI N LI +Y + A +FDK +++S ++S Y
Sbjct: 64 GKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYV 123
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G +K A +F P +D +S+NAMV Y+H A++ + M+R + F+F
Sbjct: 124 KLGMMKQARGVFYKMPE--KDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTF 181
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++VL + E E C+Q+H VV G + V ++++ Y C M
Sbjct: 182 ASVLIVCVKLKEFEL-CRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGK---------MED 231
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A +LFD+ ++ +D P+WTT+++GY D+ SA ++ M +W A+I GY R+G
Sbjct: 232 AMRLFDD--MTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNG 289
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+ +A FRKM ++ DE+T++S + A G+Q+HA++LR ++P+
Sbjct: 290 MAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNP---- 345
Query: 323 SVNNALITFYTKCGKLVQAREVFD-KMPVRDLVSWNAILSGYINARRLEEAKFIFREV-- 379
V +A++ Y KCG + AR +F+ ++D+V WN ++S + +EA + ++
Sbjct: 346 VVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLNDMLK 405
Query: 380 ----PERNLLTWTVMISGLAESGFGEESLKLFNQM 410
P RN T +++ + SG + L+ F M
Sbjct: 406 SGVKPNRN--TLVAILNACSHSGLVCDGLQFFKSM 438
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 44/283 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH ++ GF ++ + ++D Y K + A LFD DI + TTL+S Y+
Sbjct: 196 LCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYA 255
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G++ A ++F+ P ++T S+ A++ Y+ N H A+ +F +M PD F+F
Sbjct: 256 LCGDMDSAAEMFSQMPK--KNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTF 313
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S+ L A + IA + H +Q+H +++ + P V++ ++ Y C S M +
Sbjct: 314 SSCLFACATIASLK-HGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGS---------MET 363
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR++F+ Q V WN MIS +G
Sbjct: 364 ARRIFNFTEHMQD--------------------------------VVLWNTMISALAHYG 391
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
+EA M G++ + T ++++A ++GL G Q
Sbjct: 392 YGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQF 434
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
+A + +H GI++ + +L+ +T + G+ +H ++ T + I
Sbjct: 28 DAVSSLDVLHPRGIRLSSHILATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLI---A 84
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N LI Y CG V+AR+VFDKM VR+L SWN ++SGY+ +++A+ +F ++PE++ +
Sbjct: 85 NHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCV 144
Query: 386 TWTVMISGLAESGFGEESLKLFNQMK 411
+W M+ G A G E+L+ + M+
Sbjct: 145 SWNAMVVGYAHCGRFSEALRFYGWMR 170
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 203/451 (45%), Gaps = 58/451 (12%)
Query: 5 TMANLFLAQLNHPSATQTLARA--IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
++ L +QLN +L+ A I + G R+ P+ L+ I L
Sbjct: 46 SIRKLIDSQLNQLCINGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKEL 105
Query: 63 FDK---TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
+ N + F T L+S Y+ G + +A K+FN +++R+ +++AM+ S N
Sbjct: 106 HSRIGLVENVNPFVETKLVSMYAKCGLLGMARKVFN--EMSVRNLFTWSAMIGGCSRNKS 163
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
V LF M RDG PD F VL A + E + +H V++ G+ + N
Sbjct: 164 WGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLE-TGRLIHSMVIRRGMRWSKHLRN 222
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
++++ Y C M A+K+FD + ++D +W MI+G+ +N ++ A+K
Sbjct: 223 SIMAVYAKCGE---------MDCAKKIFD--CMDERDSVAWNAMISGFCQNGEIGQAQKY 271
Query: 240 LDGM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
D M P V WN +IS Y + G + A D RKM GI D YT+TS+IS
Sbjct: 272 FDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQ 331
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILS-------------------------------V 324
G + L + V+ + I S V
Sbjct: 332 KGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLV 391
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-- 382
N+LI Y KCG L A+ +FD M RD+ SWN+I+ GY A +A +F ++ E
Sbjct: 392 GNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDS 451
Query: 383 --NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N++TW +MI+G +SG +++L LF ++
Sbjct: 452 PPNIITWNIMITGYMQSGAEDQALDLFKSIE 482
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 195/456 (42%), Gaps = 77/456 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R IH+ ++ G R + +RN ++ +Y K + A +FD D + ++S +
Sbjct: 202 GRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQ 261
Query: 84 AGNVKLAEKLFNATPVTLRDT--ISYNAMVKAYSHNLDGHA--AVKLFVRMKRDGFAPDP 139
G + A+K F+A + +++N ++ Y N GH A+ L +M+ G APD
Sbjct: 262 NGEIGQAQKYFDAMQKDGVEPSLVTWNILISCY--NQLGHCDLAIDLMRKMEWFGIAPDV 319
Query: 140 FSFSTVLG----------AMSLIAE------EEWHCQ------------------QLHCD 165
+++++++ A+ L+ E E + ++H
Sbjct: 320 YTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSI 379
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDE---------------- 209
VK ++ V N+L+ Y C + M S R ++
Sbjct: 380 AVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKA 439
Query: 210 ----APLSQKDEP----SWTTMIAGYVRNDDLASARKLL-----DGMTHPIAVAWNAMIS 256
+ + D P +W MI GY+++ A L DG T A +WN++IS
Sbjct: 440 HELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLIS 499
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
G+V+ G ++A FR M I + T S++ N +++H + +R ++
Sbjct: 500 GFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVS 559
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
LSV+N LI Y K G L+ ++ +F+++ +D VSWN++LS Y+ E A +F
Sbjct: 560 E----LSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLF 615
Query: 377 REVPERNLL----TWTVMISGLAESGFGEESLKLFN 408
++ ++ L T+ ++ +G +E +F+
Sbjct: 616 YQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFS 651
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 168/360 (46%), Gaps = 43/360 (11%)
Query: 21 QTLARAIHAHILTTGFRLTP--LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
++L+ + H + L L+ N LID+YCK ++ A H+FD D++S +++
Sbjct: 368 KSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSII 427
Query: 79 SAYSAAGNVKLAEKLF------NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR 132
Y AG A +LF ++ P + I++N M+ Y + A+ LF +++
Sbjct: 428 GGYFQAGFCGKAHELFMKMQESDSPP----NIITWNIMITGYMQSGAEDQALDLFKSIEK 483
Query: 133 DGFAP-DPFSFSTVLGAMSLIAEEEWHCQQLH----CDVVKWGVMCVPSVLNTLLSCYIC 187
DG + S+++++ +++ Q C ++ V T+LS
Sbjct: 484 DGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSV--------TILSILPV 535
Query: 188 CA---SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
CA +S V+ A R L E +S +I Y ++ +L ++ + + ++
Sbjct: 536 CANLVASKKVKEIHCFAVRRILVSELSVS-------NLLIDSYAKSGNLMYSKNIFNELS 588
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
AV+WN+M+S YV HG E A D F +M G+Q + T+ S++ A + G+ + G+
Sbjct: 589 WKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKS 648
Query: 305 LHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILS 361
+ + + + V Q EH+ +A++ + GKL +A + MP+ S W A+L+
Sbjct: 649 VFSCITKDYLVRQGMEHY-----SAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLT 703
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 199/411 (48%), Gaps = 50/411 (12%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+DS A L + S + AR +HA I+ T F I+NRL+D+Y K + A
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFE--ARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDAR 74
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+FD + FS +L A + G + A LF P RD S+NAMV ++
Sbjct: 75 KVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPE--RDQCSWNAMVSGFAQRDRF 132
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A++ V M + F + +SF + L A + G+M +
Sbjct: 133 EEALRFVVDMHSEDFVLNEYSFGSALSACA-------------------GLMDL------ 167
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
S V+ L+A +R D S ++ Y + +ASA++
Sbjct: 168 ----------SIGVQIHGLIAKSRYSLDVYMGS--------ALVDMYSKCRVVASAQRAF 209
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
D M V+WN++I+ Y ++G +A + F +M + GI+ DE T S+ SA +
Sbjct: 210 DDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIR 269
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
G Q+HA V++ ++ L + NAL+ Y KC ++ +AR VFD+MP+RD+VS +++
Sbjct: 270 EGLQIHARVMKHDKYRND---LVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMV 326
Query: 361 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
SGY A ++ A+ +F + ERN+++W +I+G ++G EE+++LF +K
Sbjct: 327 SGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK 377
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 172/349 (49%), Gaps = 23/349 (6%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ + L+ YS V A++ F+ V R+ +S+N+++ Y N A+++FVR
Sbjct: 185 DVYMGSALVDMYSKCRVVASAQRAFDDMDV--RNIVSWNSLITCYEQNGPAGKALEVFVR 242
Query: 130 MKRDGFAPDPFSFSTVLGA-MSLIAEEEWHCQQLHCDVVKWGVMCVPSVL-NTLLSCYIC 187
M G PD + ++V A SL A E Q+H V+K VL N L+ Y
Sbjct: 243 MMNCGIEPDEITLASVASACASLSAIREG--LQIHARVMKHDKYRNDLVLGNALVDMYAK 300
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + AR +FD PL +D S T+M++GY + + +AR + M
Sbjct: 301 CRR---------VNEARLVFDRMPL--RDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V+WNA+I+GY ++G EEA F + I YT+ +L++A N GRQ H
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 308 YVLRTV--VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
++L+ + E + V N+LI Y KCG + R VF++M RD VSWNA++ GY
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469
Query: 366 ARRLEEAKFIFREV---PER-NLLTWTVMISGLAESGFGEESLKLFNQM 410
EA IFRE+ ER + +T ++S + +G EE F M
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSM 518
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 202/405 (49%), Gaps = 38/405 (9%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +H +L GF + N LID+Y K ++ A + + D S ++++A
Sbjct: 152 LGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACV 211
Query: 83 AAGNVKLAEKLFNATPVTLRD--TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
A G V A L ++ + ++++A++ +S N +V+LF RM G APD
Sbjct: 212 ANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDAR 271
Query: 141 SFSTVLGAMSLIAEEEWH--CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
+ ++VL A S + +W ++LH +V+ + V N L+ Y C
Sbjct: 272 TLASVLPACSRM---KWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGD-------- 320
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA----VAWNAM 254
M SA K+F + ++K S+ TMI GY+ N ++ A++L M ++WN M
Sbjct: 321 -MKSAFKIF--SKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCM 377
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
ISG+V + ++++A FR + GI+ D +T S+++ + G+++H+ + +
Sbjct: 378 ISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGL 437
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
Q + V AL+ Y KC ++ A+ FD++ RD +WNA++SGY ++ +
Sbjct: 438 QSNSF----VGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGK--- 490
Query: 375 IFREVPER--------NLLTWTVMISGLAESGFGEESLKLFNQMK 411
RE+ ER N+ TW +++GL E+ + +++LFN+M+
Sbjct: 491 -IRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQ 534
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 38/391 (9%)
Query: 2 DSRTMANLFLAQLNHPSATQT----LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIP 57
D+RT+A++ P+ ++ + + +H +I+ + N L+ +Y + ++
Sbjct: 269 DARTLASVL------PACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMK 322
Query: 58 YAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV--TLRDTISYNAMVKAYS 115
A +F K S T++ Y GNV A++LF RD IS+N M+ +
Sbjct: 323 SAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHV 382
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVM 172
N A+ LF + +G PD F+ ++L M+ I + +++H + G+
Sbjct: 383 DNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQG----KEIHSIAIVKGLQ 438
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
V L+ Y C + +A+ FDE +S++D +W +I+GY R +
Sbjct: 439 SNSFVGGALVEMYCKCND---------IIAAQMAFDE--ISERDTSTWNALISGYARCNQ 487
Query: 233 LASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 288
+ R+L++ M P WN++++G V + Y+ A F +M ++ D YT
Sbjct: 488 IGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGI 547
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+++A + G+Q+HAY +R H + L+ Y KCG + +V++K+
Sbjct: 548 ILAACSKLATIHRGKQVHAYSIRAGYDSDAH----IGATLVDMYAKCGSIKHCYQVYNKI 603
Query: 349 PVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+LV NA+L+ Y EE IFR +
Sbjct: 604 SNPNLVCHNAMLTAYAMHGHGEEGIVIFRRM 634
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 182/406 (44%), Gaps = 65/406 (16%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S + TL + +H+H + TGF ++ +L+ +Y +S+ A H+FDK
Sbjct: 44 SNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDK------------ 91
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+TL++ S+ A+++ + + + LF DG
Sbjct: 92 ---------------------MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGE 130
Query: 138 --DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
D F F VL + + E +Q+H V+K G + V N L+ Y C S
Sbjct: 131 KLDFFVFPVVLNICCGLGDLELG-RQVHGMVLKHGFVTNVYVGNALIDMYGKCGS----- 184
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAW 251
+ A+K+ + ++QKD SW ++I V N + A LL+ M P V W
Sbjct: 185 ----LDEAKKVLE--GMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTW 238
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
+A+I G+ + E+ + F +M G+ D T S++ A G++LH Y++R
Sbjct: 239 SAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVR 298
Query: 312 TVVQPSEHFILS---VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
H + S V NAL+ Y +CG + A ++F K + S+N ++ GY+
Sbjct: 299 -------HELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGN 351
Query: 369 LEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +AK +F +E ER+ ++W MISG ++ +++L LF +
Sbjct: 352 VGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDL 397
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 72/353 (20%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH+ + G + + L+++YCK ++I A FD+
Sbjct: 425 GKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDE------------------ 466
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
++ RDT ++NA++ Y+ +L RMK DGF P+ ++++
Sbjct: 467 ---------------ISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWN 511
Query: 144 TVLG----------AMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
++L AM L E L D+ G++ C +T+
Sbjct: 512 SILAGLVENKQYDLAMQLF--NEMQVSSLRPDIYTVGIILAA-----------CSKLATI 558
Query: 194 VESPVLMA-SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ A S R +D D T++ Y + + ++ + +++P V N
Sbjct: 559 HRGKQVHAYSIRAGYD------SDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHN 612
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
AM++ Y HG EE FR+M ++ D T+ S++S+ + G G + Y++ T
Sbjct: 613 AMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECF-YLMET 671
Query: 313 V-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
+ P+ +H+ ++ ++ GKL +A ++ MP+ D V+W+A+L G
Sbjct: 672 YNITPTLKHY-----TCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGG 719
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 24/396 (6%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+A+H+ ++ T + N LID+Y K H FD PN + TLLS YS
Sbjct: 30 GKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSK 89
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD--GFAPDPFS 141
G A KLF+ P R+ +SYN+++ + + AVK F M+ G D F+
Sbjct: 90 KGVFNQAYKLFDEMP--QRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFT 147
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+++ S + +W +Q+H G + N L+ Y C
Sbjct: 148 LVSLVSNCSCLDTVKW-LRQVHGVATIVGFRTNLILNNALIDAYGKCGEPN--------- 197
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
S+ LF + +KD SWT+M+ Y R + A K+ + M V+W A+ISG+V++
Sbjct: 198 SSFCLF--RSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKN 255
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH-F 320
G EA + F +M G+ T+ S++ A + L G+Q+H ++R + S++ F
Sbjct: 256 GRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRG--RSSDNLF 313
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKM-PVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+ V NAL+ Y KCG + A +F+ M V+D+VSWN +++G+ R E++ +F +
Sbjct: 314 NVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRM 373
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
E N+ +T+ ++S +G L+L + M+
Sbjct: 374 IESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSME 409
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 23/283 (8%)
Query: 135 FAPDPFSFSTVLGAMSLI-----AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
F + FS ST+ SLI A+ H + LH ++K + + N L+ Y C
Sbjct: 2 FHTNDFS-STIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCG 60
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S K FD+ P K +W T+++ Y + A KL D M V
Sbjct: 61 CKE---------SIHKAFDDLP--NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLV 109
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSM--GIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
++N++ISG RH ++EA FR+M + G+ +DE+T SL+S RQ+H
Sbjct: 110 SYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHG 169
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ T+V + IL NNALI Y KCG+ + +F M +D VSW +++ Y A
Sbjct: 170 --VATIVGFRTNLIL--NNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRAS 225
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
R+++A +F E+P + ++W +ISG ++G E+L++F+QM
Sbjct: 226 RIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQM 268
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
++SLIS + G+ LH+ +++T + F + N LI Y+KCG + F
Sbjct: 14 FSSLISNCVSAKSLKHGKALHSQLIKTAL----FFETFLANGLIDLYSKCGCKESIHKAF 69
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 405
D +P + +WN +LS Y +A +F E+P+RNL+++ +ISGL F +E++K
Sbjct: 70 DDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVK 129
Query: 406 LFNQMK 411
F +M+
Sbjct: 130 FFREMQ 135
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 184/363 (50%), Gaps = 26/363 (7%)
Query: 52 KSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
++ N+ A +F++ +I + T +L+ Y+ G + A KLF+ P R T +YNAM+
Sbjct: 42 RNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPE--RTTATYNAMI 99
Query: 112 KAYSHN-LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLHCDVVKW 169
Y N + A +LF + S++ ++ M L+ ++ ++L+ +
Sbjct: 100 SGYIRNGCNVTKAYELFTSFHDR----NEVSYAAMI--MGLVKARKFDLAEKLYREAPH- 152
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
P N L++ Y+ M A ++F+ +S++D SW+ ++ G R
Sbjct: 153 -EFRDPVCSNALINGYLKIGE---------MNEALRVFENVGVSKRDVVSWSAVVGGLCR 202
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTS 288
+ + +AR L D M V+W+AMI GY+ GL+E F F M G+ +++ T T
Sbjct: 203 DGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTI 262
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+I N G G Q+H V R + F ++N +IT Y+ G A++VF M
Sbjct: 263 MIKGCGNCGRVKEGIQIHGLVSRLGFE----FGSVLSNTIITMYSLFGYTDMAKKVFSGM 318
Query: 349 PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFN 408
+DLV+WN+++SGYI ++ A +F +PE++L++WT MI G A G ++++LF+
Sbjct: 319 GNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFD 378
Query: 409 QMK 411
+K
Sbjct: 379 TLK 381
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 188/404 (46%), Gaps = 44/404 (10%)
Query: 40 PLIRNRLIDIYCKSSNIPYAHHLFDKT--PNPDIFSRTTLLSAYSAAGNVKLAEKLFNAT 97
P+ N LI+ Y K + A +F+ D+ S + ++ G + A LF+
Sbjct: 157 PVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRM 216
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL----GAMSLIA 153
P R+ +S++AM+ Y LF+ M+R+G + T++ G +
Sbjct: 217 PE--RNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVK 274
Query: 154 EEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC-------------CASSTLVESPVLM 200
E Q+H V + G + NT+++ Y + LV L+
Sbjct: 275 E----GIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLI 330
Query: 201 A---------SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ +A ++F+ P +KD SWT MI G+ + + A +L D + W
Sbjct: 331 SGYIYNNEVDAAYEVFERMP--EKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVW 388
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
+ISG+V + YEEA F +M + + T +S++SAS + N G Q+H++VL+
Sbjct: 389 TVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVLK 448
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++ + LS+ N+LI+FY KCG + A ++F + ++VS+N++++G+ EE
Sbjct: 449 MNLE----YDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEE 504
Query: 372 AKFIFR----EVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
A +++ E E N +T+ ++S +G EE LFN MK
Sbjct: 505 ALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMK 548
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 162/358 (45%), Gaps = 22/358 (6%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH + GF ++ N +I +Y A +F N D+ + +L+S Y
Sbjct: 279 IHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNE 338
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
V A ++F P +D IS+ AM++ ++ + AV+LF +K D F ++ ++
Sbjct: 339 VDAAYEVFERMPE--KDLISWTAMIRGFATDGRIGKAVELFDTLKE----KDDFVWTVLI 392
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
++ EE+ + LH V C P+ L + L E + + K+
Sbjct: 393 SG--FVSNEEYE-EALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVLKM 449
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
E LS ++ ++I+ Y + ++ A K+ + P V++N++I+G+ ++G EE
Sbjct: 450 NLEYDLSIQN-----SLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEE 504
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQP-SEHFILSV 324
A +++M + ++ + T+ +++SA + GL G L + R ++P ++H+
Sbjct: 505 ALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYA--- 561
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEEAKFIFREVPE 381
++ + G L +A MP+ W A+L+ +R++ AK + + E
Sbjct: 562 --CMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLAAQHITE 617
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 181/389 (46%), Gaps = 49/389 (12%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
LA +HA + GF + I+N ++ +Y K ++ A +F P +F +++ YS
Sbjct: 164 LAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYS 223
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
A ++FN P RD +S+N ++ +S + G + +FV M GF+P+ ++
Sbjct: 224 QMYGPYKALQIFNRMPE--RDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTY 281
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+VL A + ++ +W LH +++ +E + +
Sbjct: 282 GSVLSACASTSDLKWG-AHLHARILR-------------------------MEHSLDLVF 315
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
L D Y + L A+++ + ++WN++I+G V G
Sbjct: 316 GNGLIDM-----------------YAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFG 358
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
L E+A F +M + +DE+ +++ + G LH Y +++ + S
Sbjct: 359 LGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSA---- 414
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
V NA+IT Y KCG +A VF MP+R+ +SW A+++ + + + +A+ F +PER
Sbjct: 415 PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPER 474
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N++TW M+S ++GF EE LKL+ M+
Sbjct: 475 NIVTWNSMLSTYVQNGFSEEGLKLYVSMR 503
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 22/362 (6%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+AR +HA ++ +G + + N L+ +Y A +F +T + +IF+ T++ A
Sbjct: 26 IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD----GFAPD 138
++ + AEKLF+ PV ++D++S+ M+ YS N + + F M RD G D
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
PFSF++V+ A + + QLH V K G + N+++ Y+ C L E+
Sbjct: 146 PFSFTSVMKACGSLGDSRL-AIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
LF W +MI GY + A ++ + M V+WN +IS +
Sbjct: 205 FDIERPSLF-----------CWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIF 253
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
+HG + F +M + G + TY S++SA +T G LHA +LR E
Sbjct: 254 SQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRM-----E 308
Query: 319 HFI-LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
H + L N LI Y KCG L A+ VF + D +SWN++++G ++ E+A +F
Sbjct: 309 HSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFN 368
Query: 378 EV 379
++
Sbjct: 369 QM 370
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 188/408 (46%), Gaps = 36/408 (8%)
Query: 15 NHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKT----PNPD 70
H Q LA + + GF + ++ +S++ + HL + + D
Sbjct: 255 QHGFGVQCLA--MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLD 312
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+ L+ Y+ G + LA+++F + + D IS+N+++ H G A+ LF +M
Sbjct: 313 LVFGNGLIDMYAKCGCLDLAKRVFKS--LREHDHISWNSLITGVVHFGLGEDALILFNQM 370
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+R D F T+LG S + + LH +K G+ V N +++ Y C
Sbjct: 371 RRSSVVLDEFILPTILGVCSG-PDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGD 429
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ A +F PL ++ SWT MI + R+ D+ AR D M V
Sbjct: 430 TD---------KADLVFRLMPL--RNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVT 478
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN+M+S YV++G EE + M S G+Q D T+T+ I A + + G Q
Sbjct: 479 WNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQ------ 532
Query: 311 RTVVQPSEHFILSVN----NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY--- 363
VV + F LS+N N+++T Y++CG + +A+ FD + +DL+SWNA+L+ +
Sbjct: 533 --VVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQN 590
Query: 364 -INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + ++ + + + + N +++ ++SG + G E F+ M
Sbjct: 591 GLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSM 638
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPI--AVAWNAMISGYVRHGLYEEAFDTF----R 272
+W TMI V + ++ A KL D M + +V+W MISGY ++G + +F+TF R
Sbjct: 76 TWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIR 135
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
+ G D +++TS++ A + G QLHA V + + N+++ Y
Sbjct: 136 DTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMET----CIQNSVVGMY 191
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 392
KCG + A VF + L WN+++ GY +A IF +PER+ ++W +IS
Sbjct: 192 VKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLIS 251
Query: 393 GLAESGFGEESLKLFNQM 410
++ GFG + L +F +M
Sbjct: 252 IFSQHGFGVQCLAMFVEM 269
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 169/365 (46%), Gaps = 56/365 (15%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKS--SNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
I+ HI+ TG L P+ R + +C S NI YA+ LF + PNP+++
Sbjct: 47 IYPHIIKTGLTLNPIASTRALT-FCASPSGNINYAYKLFVRMPNPNLY------------ 93
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
S+N +++A+S + A+ LFV M P ++ +
Sbjct: 94 ---------------------SWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPS 132
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
V A + + + Q LH VVK G+ + NT++ Y + LM+ AR
Sbjct: 133 VFKAYAQLGHAHYGAQ-LHGRVVKLGLQNDQFICNTIIYMY---------ANGGLMSEAR 182
Query: 205 KLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
++FD L D + +MI GY + ++ +R L D M +V+WN+MISGYVR+G
Sbjct: 183 RVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNG 242
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EA + F KM G ++ E+T SL++A + G G+ +H Y+ R HF L
Sbjct: 243 KLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRN------HFEL 296
Query: 323 S--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+ V A+I Y KCG + A EVF+ P R L WN+I+ G EA F ++
Sbjct: 297 NVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLE 356
Query: 381 ERNLL 385
LL
Sbjct: 357 SSKLL 361
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A KL M +P +WN +I + R + A F M IQ TY S+ A
Sbjct: 80 AYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQ 139
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR---- 351
G + G QLH V++ +Q ++ FI N +I Y G + +AR VFD +
Sbjct: 140 LGHAHYGAQLHGRVVKLGLQ-NDQFIC---NTIIYMYANGGLMSEARRVFDGKKLELYDH 195
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
D+V+ N+++ GY ++E++ +F ++ R ++W MISG +G E+L+LFN+M+
Sbjct: 196 DVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQ 255
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 199/432 (46%), Gaps = 54/432 (12%)
Query: 12 AQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI 71
A+++ P Q IH H++ GF +RN LI++Y N+ AH +F ++ D+
Sbjct: 157 ARVSEPEGKQ-----IHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDL 211
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPV-----------------------------TLR 102
S TLL+ Y G+V AE +++ PV +
Sbjct: 212 VSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIEGK 271
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D +S++AM+ Y N A+ LFV M +G D + + A + ++ + +
Sbjct: 272 DMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMG-RSV 330
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H K G+ S+ N L+ Y C + A+K+F L D SW +
Sbjct: 331 HGLAAKIGIQDYVSLQNALIHLYSNCGE---------ILDAQKIFSGGVL--LDLVSWNS 379
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
MI+GY+ + A+KL D M V+W+AMISGY +HG + EA F++M +GI+ D
Sbjct: 380 MISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPD 439
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E S+ISA + + G+ +HAY+ + + + + IL L+ Y KCG + A
Sbjct: 440 ETAIVSVISACTHMAALDLGKWIHAYISKN--EFNVNVILGT--TLVDMYMKCGCVENAL 495
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESG 398
EVF M + + +WNA++ G +E++ +F ++ + N +T+ ++ G
Sbjct: 496 EVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMG 555
Query: 399 FGEESLKLFNQM 410
+E + F+ M
Sbjct: 556 LVDEGRRYFSSM 567
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 199/421 (47%), Gaps = 83/421 (19%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL--FDKTPNPDIFSRTTLLSAYS 82
+ I + ++ TG+ +RL++ S+ IP+ + L F+ NP+ F T++ ++
Sbjct: 61 KQILSQMILTGYITDTYAASRLVNFSTHSNFIPFQYSLKIFNHLHNPNTFIWNTIMRSHL 120
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+L N+ L KLF+ +PD +++
Sbjct: 121 ---------ELHNSPQQALN--------------------FYKLFLFQNT---SPDHYTY 148
Query: 143 STVL-GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+L + ++E E +Q+H VVK+G V NTL++ Y C + M
Sbjct: 149 PILLRSCTARVSEPE--GKQIHDHVVKFGFDSDVYVRNTLINLYAVCGN---------MV 197
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDD----------------------------- 232
SA K+F E+ + D SW T++AGYV D
Sbjct: 198 SAHKVFKESVV--LDLVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKE 255
Query: 233 --LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
+A AR L D + V+W+AMIS Y ++G+ EEA F M++ G+ +DE S I
Sbjct: 256 GCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAI 315
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
SA + GR +H + +Q +S+ NALI Y+ CG+++ A+++F +
Sbjct: 316 SACTSLSAVRMGRSVHGLAAKIGIQD----YVSLQNALIHLYSNCGEILDAQKIFSGGVL 371
Query: 351 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
DLVSWN+++SGY+ +E+AK +F + E+++++W+ MISG A+ G E++ LF +M
Sbjct: 372 LDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEM 431
Query: 411 K 411
+
Sbjct: 432 Q 432
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 189/397 (47%), Gaps = 51/397 (12%)
Query: 46 LIDIYCKSSNIPYAHHLFDK-TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDT 104
+I Y K I A LFD+ + T ++S Y ++ AE+LFN PV R+
Sbjct: 38 MISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSGYIKINRIEEAERLFNEMPV--RNV 95
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL-- 162
+S+N M+ Y+ N A+ LF RM + S++TV+ A++ HC ++
Sbjct: 96 VSWNTMIDGYARNGRTQEAMDLFGRMPE----RNVVSWNTVMTALA-------HCGRIDD 144
Query: 163 ---------HCDVVKWGVMCVPSVLNTLLS----CYICCASSTLVESPVLMAS------- 202
DVV W M N + + +V ++A
Sbjct: 145 AERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAMIAGYAQNGRF 204
Query: 203 --ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A KLF+ P ++D PSW TM+ G+++N DL A KL M + W AM++GYV+
Sbjct: 205 DEALKLFERMP--ERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQ 262
Query: 261 HGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
HGL EEA F KM + G++ T+ +++ A + G+Q+H + +TV Q S +
Sbjct: 263 HGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTY 322
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDK--MPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ +ALI Y+KCG A+++FD DL++WN +++ Y + EA +F
Sbjct: 323 VV----SALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFN 378
Query: 378 EVPE----RNLLTWTVMISGLAESGFGEESLKLFNQM 410
++ E N +T+ +++ + +G +E K F+++
Sbjct: 379 KMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDEL 415
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 53/263 (20%)
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
T++S YI C L+ ARKLFD ++K WT M++GY++ + + A +L
Sbjct: 37 TMISGYIKCG---------LINEARKLFDRLD-AEKSVIVWTAMVSGYIKINRIEEAERL 86
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
+ M V+WN MI GY R+G +EA D F +M + ++ ++++A L
Sbjct: 87 FNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNV----VSWNTVMTA-----LA 137
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
+CGR A R + E ++S ++ +K G++ AR+VFD+MP+R++VSWNA+
Sbjct: 138 HCGRIDDAE--RLFNEMRERDVVSW-TTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAM 194
Query: 360 LSGYINARRLEEAKFIFREVPER-------------------------------NLLTWT 388
++GY R +EA +F +PER N++TWT
Sbjct: 195 IAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWT 254
Query: 389 VMISGLAESGFGEESLKLFNQMK 411
M++G + G EE+LKLFN+M+
Sbjct: 255 AMMTGYVQHGLSEEALKLFNKMQ 277
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 166/377 (44%), Gaps = 59/377 (15%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y ++ A LF++ P D+ S T+++ + G++ AEKLF+A P ++
Sbjct: 192 NAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPK--KN 249
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
I++ AM+ Y + A+KLF +M+ DG P +F TVLGA S +A QQ+
Sbjct: 250 VITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLP-EGQQI 308
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H + K V++ L++ Y C + A+K+FD+ D +W
Sbjct: 309 HQMISKTVFQESTYVVSALINMYSKCGDFHV---------AKKMFDDGLSGHMDLIAW-- 357
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
N MI+ Y HG EA F KM +G Q +
Sbjct: 358 -----------------------------NGMIAAYAHHGYGNEAIILFNKMQELGFQAN 388
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVL--RTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ TY L++A + GLF+ G + +L R + +H+ LI + G+L +
Sbjct: 389 DVTYVGLLTACSHAGLFDEGFKYFDELLKNRYMQVREDHY-----TCLIDLCGRAGRLDE 443
Query: 341 AREVFDKMPVR-DLVSWNAILSG---YINAR--RLEEAKFIFREVPERNLLTWTVMISGL 394
A + + + L W A+L+G + NA RL K + E PE N T+ + +
Sbjct: 444 ALNIIEGLGKEVSLSVWGALLAGCSVHGNADIGRLVADKVLKME-PE-NADTYLLASNMY 501
Query: 395 AESGFGEESLKLFNQMK 411
A G EE+ + +MK
Sbjct: 502 ASVGMREEAANVRMKMK 518
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ R + ARK+ D M+ + W MISGY++ GL EA F ++ + +
Sbjct: 8 ISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDA---EKSV 64
Query: 284 YTYTSLISASFNTG-LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+T+++S + R + +R VV N +I Y + G+ +A
Sbjct: 65 IVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSW---------NTMIDGYARNGRTQEAM 115
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
++F +MP R++VSWN +++ + R+++A+ +F E+ ER++++WT M++GL+++G ++
Sbjct: 116 DLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDD 175
Query: 403 SLKLFNQM 410
+ +F++M
Sbjct: 176 ARDVFDRM 183
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N IS R G EA F +M + D +T++IS GL N R+L +
Sbjct: 5 NYFISKLCREGQINEARKVFDEMS----ERDSCLWTTMISGYIKCGLINEARKLFDRL-- 58
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+E ++ V A+++ Y K ++ +A +F++MPVR++VSWN ++ GY R +E
Sbjct: 59 ----DAEKSVI-VWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQE 113
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
A +F +PERN+++W +++ LA G +++ +LFN+M+
Sbjct: 114 AMDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMR 153
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 180/391 (46%), Gaps = 63/391 (16%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH H+ GF ++ L+D+YCK ++ A +FD+ P+ ++ S +LLS Y GN
Sbjct: 126 IHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGN 185
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+ ++ F+ P L+D IS+N MV Y+ A LF +M FA
Sbjct: 186 LDEGQRFFDEIP--LKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFA---------- 233
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
W NT+++ Y+ C S + AR+L
Sbjct: 234 ---------SW---------------------NTMITGYVDCGS---------IVEAREL 254
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
FD P +++ S TMIAGY ++ D+ SAR+L D M +++NAMI+ Y + +E
Sbjct: 255 FDAMP--RRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKE 312
Query: 267 AFDTFRKM--HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
A D F M + D+ T S+ISA G R + + + + +H +
Sbjct: 313 ALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDH----L 368
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIFREVPE-- 381
ALI Y KCG + +A E+F + RD+V+++A++ G IN R + + R E
Sbjct: 369 ATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECI 428
Query: 382 -RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
NL+T+T +++ +G EE + F MK
Sbjct: 429 IPNLVTYTGILTAYNHAGLAEEGYRCFISMK 459
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 55/308 (17%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D+ S+ +++ +S AV L+V+M+R G P + S++L + + + E++ +
Sbjct: 68 DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARV-EDDLCGLLI 126
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H V K+G V LL Y C +V +ARK+FDE P K+ SW +
Sbjct: 127 HGHVHKFGFDACVYVQTALLDLY--CKIGDVV-------TARKVFDEMP--DKNVVSWNS 175
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+++GY++ +L ++ D + ++WN M+SGY + G + A F+ QM
Sbjct: 176 LLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQ-------QMP 228
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E + AS+NT +IT Y CG +V+AR
Sbjct: 229 ERNF-----ASWNT-------------------------------MITGYVDCGSIVEAR 252
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
E+FD MP R+ VS +++GY + + A+ +F ++ +++LL++ MI+ A+S +E
Sbjct: 253 ELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKE 312
Query: 403 SLKLFNQM 410
+L LFN M
Sbjct: 313 ALDLFNVM 320
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+L + +P + +W +I + + G + EA + +M +G+ + +S++ +
Sbjct: 60 ILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVED 119
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
CG +H +V + + V AL+ Y K G +V AR+VFD+MP +++VSWN+
Sbjct: 120 DLCGLLIHGHVHKFGFDACVY----VQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNS 175
Query: 359 ILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+LSGYI L+E + F E+P +++++W M+SG A++G + + LF QM
Sbjct: 176 LLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQM 227
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y +I A LFD P + S T+++ YS +G+V A +LF+ + +D
Sbjct: 236 NTMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFD--QMDDKD 293
Query: 104 TISYNAMVKAYSHNLDGHAAVKLF-VRMKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
+SYNAM+ Y+ + A+ LF V +K D PD + ++V+ A S + E H +
Sbjct: 294 LLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLE-HWRW 352
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
+ + +G++ + L+ Y C S + A +LF L ++D +++
Sbjct: 353 IESQINNFGIVLDDHLATALIDLYAKCGS---------IDKAYELFH--GLRKRDVVAYS 401
Query: 222 TMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
MI G N + A +L + M P V + +++ Y GL EE + F M
Sbjct: 402 AMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMKDN 461
Query: 278 GI--QMDEY 284
GI +D Y
Sbjct: 462 GIVPSVDHY 470
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 188/394 (47%), Gaps = 45/394 (11%)
Query: 46 LIDIYCKSSNIPYAHHLFDK-TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDT 104
+I Y K I A LFD+ + T ++S Y ++ AE+LFN PV R+
Sbjct: 82 MISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPV--RNV 139
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE----EEWHCQ 160
+S+N M+ Y+ N A+ LF RM + S++TV+ A++ E +
Sbjct: 140 VSWNTMIDGYARNGRTQEALDLFGRMPE----RNVVSWNTVMTALAHCGRIDDAERLFNE 195
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV--------LMAS---------A 203
DVV W M N + A + P+ ++A A
Sbjct: 196 MRERDVVSWTTMVAGLSKNGRVDA----AREVFDKMPIRNVVSWNAMIAGYAQNGRFDEA 251
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
KLF+ P ++D PSW TM+ G+++N DL A +L M + W AM++GYV+HGL
Sbjct: 252 LKLFERMP--ERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGL 309
Query: 264 YEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EEA F KM + G++ T+ +++ A + G+Q+H + +TV Q S + +
Sbjct: 310 SEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVV- 368
Query: 323 SVNNALITFYTKCGKLVQAREVFDK--MPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+ALI Y+KCG A+++FD DL++WN +++ Y + EA +F ++
Sbjct: 369 ---SALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQ 425
Query: 381 E----RNLLTWTVMISGLAESGFGEESLKLFNQM 410
E N +T+ +++ + +G +E K F+++
Sbjct: 426 ELGFQANDVTYVGLLTACSHAGLFDEGFKYFDEL 459
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 136/263 (51%), Gaps = 53/263 (20%)
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
T++S YI C L+ ARKLFD P +QK WT M++GY++ + + A +L
Sbjct: 81 TMISGYIKCG---------LINEARKLFDR-PDAQKSVIVWTAMVSGYIKMNRIEEAERL 130
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
+ M V+WN MI GY R+G +EA D F +M + ++ ++++A L
Sbjct: 131 FNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNV----VSWNTVMTA-----LA 181
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
+CGR A R + E ++S ++ +K G++ AREVFDKMP+R++VSWNA+
Sbjct: 182 HCGRIDDAE--RLFNEMRERDVVSWT-TMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAM 238
Query: 360 LSGYINARRLEEAKFIFREVPER-------------------------------NLLTWT 388
++GY R +EA +F +PER N++TWT
Sbjct: 239 IAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWT 298
Query: 389 VMISGLAESGFGEESLKLFNQMK 411
M++G + G EE+LKLFN+M+
Sbjct: 299 AMMTGYVQHGLSEEALKLFNKMQ 321
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 13/188 (6%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ R + ARK+ D M+ + W MISGY++ GL EA F + + Q
Sbjct: 52 ISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDA---QKSV 108
Query: 284 YTYTSLISASFNTG-LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+T+++S + R + +R VV N +I Y + G+ +A
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSW---------NTMIDGYARNGRTQEAL 159
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
++F +MP R++VSWN +++ + R+++A+ +F E+ ER++++WT M++GL+++G +
Sbjct: 160 DLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDA 219
Query: 403 SLKLFNQM 410
+ ++F++M
Sbjct: 220 AREVFDKM 227
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 32/117 (27%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRD--------------------------------L 353
N I+ + GK+ +AR+VFD+M RD +
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ W A++SGYI R+EEA+ +F E+P RN+++W MI G A +G +E+L LF +M
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM 165
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 175/346 (50%), Gaps = 21/346 (6%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ R L+ Y+ G +K A ++F+ + + +D +++ M+ Y+ + A+++F
Sbjct: 178 ELLVRNGLIHFYAERGLLKNARQVFDES--SDKDVVTWTTMIDGYAAHDCSEEAMEVFEL 235
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M P+ + V+ A S + E +++H V + + C S+ N LL Y+ C
Sbjct: 236 MLLSHVEPNEVTLIAVVSACSDMGNLEMG-KRVHEKVEEKNMRCSLSLHNALLDMYVKCD 294
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ AR+LFD ++ KD SWT+M+ GY + DL SAR+ D AV
Sbjct: 295 C---------LVDARELFDR--MATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 343
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W+AMI+GY ++ +E+ F +M G+ E+T S++SA N G +H Y
Sbjct: 344 CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF 403
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ + P +++ NA++ Y KCG + A EVF MP R+L+SWN +++GY R
Sbjct: 404 VVGKIIP---LSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRA 460
Query: 370 EEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++A +F ++ E N +T+ +++ + G E + F+ M+
Sbjct: 461 KQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNME 506
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 72/353 (20%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ + +H + R + + N L+D+Y K + A LFD+ D++S T++++ Y+
Sbjct: 263 MGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYA 322
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G+++ A + F+ TP ++ + ++AM+ YS N ++KLF M G P +
Sbjct: 323 KCGDLESARRFFDQTP--RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTL 380
Query: 143 STVLGAMSLIAEEEWHCQQLHC-DVVKW-------GVMCVPSVL--NTLLSCYICCASST 192
+VL A C QL C ++ W G + SV N ++ Y C S
Sbjct: 381 VSVLSA----------CGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGS-- 428
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ +A ++F P +++ SW TMIAGY N
Sbjct: 429 -------IDAATEVFSTMP--ERNLISWNTMIAGYAAN---------------------- 457
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
G ++A + F +M +MG + + T+ SL++A + GL + GR+ + R
Sbjct: 458 ---------GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERK 508
Query: 313 V-VQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSG 362
++P H+ ++ + G L +A ++ MP++ +W A+L+
Sbjct: 509 YGIKPERGHYA-----CMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNA 556
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGY--VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
DL A + + + P WN MI GY R ++ AF F M + ++MD ++
Sbjct: 93 DLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIF--AFSFFVYMFQLRVEMDSRSFVFA 150
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ A G ++ V + L V N LI FY + G L AR+VFD+
Sbjct: 151 LKACQQFETVFEGESVYCVVWKMGFDCE----LLVRNGLIHFYAERGLLKNARQVFDESS 206
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESG 398
+D+V+W ++ GY EEA +F + E N +T ++S ++ G
Sbjct: 207 DKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMG 259
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 175/346 (50%), Gaps = 21/346 (6%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ R L+ Y+ G +K A ++F+ + + +D +++ M+ Y+ + A+++F
Sbjct: 128 ELLVRNGLIHFYAERGLLKNARQVFDES--SDKDVVTWTTMIDGYAAHDCSEEAMEVFEL 185
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M P+ + V+ A S + E +++H V + + C S+ N LL Y+ C
Sbjct: 186 MLLSHVEPNEVTLIAVVSACSDMGNLEMG-KRVHEKVEEKNMRCSLSLHNALLDMYVKCD 244
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ AR+LFD ++ KD SWT+M+ GY + DL SAR+ D AV
Sbjct: 245 C---------LVDARELFDR--MATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 293
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W+AMI+GY ++ +E+ F +M G+ E+T S++SA N G +H Y
Sbjct: 294 CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF 353
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ + P +++ NA++ Y KCG + A EVF MP R+L+SWN +++GY R
Sbjct: 354 VVGKIIP---LSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRA 410
Query: 370 EEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++A +F ++ E N +T+ +++ + G E + F+ M+
Sbjct: 411 KQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNME 456
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 72/353 (20%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ + +H + R + + N L+D+Y K + A LFD+ D++S T++++ Y+
Sbjct: 213 MGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYA 272
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G+++ A + F+ TP ++ + ++AM+ YS N ++KLF M G P +
Sbjct: 273 KCGDLESARRFFDQTP--RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTL 330
Query: 143 STVLGAMSLIAEEEWHCQQLHC-DVVKW-------GVMCVPSVL--NTLLSCYICCASST 192
+VL A C QL C ++ W G + SV N ++ Y C S
Sbjct: 331 VSVLSA----------CGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGS-- 378
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ +A ++F P +++ SW TMIAGY N
Sbjct: 379 -------IDAATEVFSTMP--ERNLISWNTMIAGYAAN---------------------- 407
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
G ++A + F +M +MG + + T+ SL++A + GL + GR+ + R
Sbjct: 408 ---------GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERK 458
Query: 313 V-VQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSG 362
++P H+ ++ + G L +A ++ MP++ +W A+L+
Sbjct: 459 YGIKPERGHYA-----CMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNA 506
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGY--VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
DL A + + + P WN MI GY R ++ AF F M + ++MD ++
Sbjct: 43 DLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIF--AFSFFVYMFQLRVEMDSRSFVFA 100
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ A G ++ V + L V N LI FY + G L AR+VFD+
Sbjct: 101 LKACQQFETVFEGESVYCVVWKMGFDCE----LLVRNGLIHFYAERGLLKNARQVFDESS 156
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESG 398
+D+V+W ++ GY EEA +F + E N +T ++S ++ G
Sbjct: 157 DKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMG 209
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 67/421 (15%)
Query: 6 MANLFLAQLNHPSATQ-------TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPY 58
MA +F+ +L + T T + IHAH++ + + +++D ++ Y
Sbjct: 1 MATIFIRELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSY 60
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
A LF + +P+IF+ YNA+++ Y+HN
Sbjct: 61 ATLLFKQLLHPNIFT---------------------------------YNAIIRTYAHNR 87
Query: 119 DGHAAVKLFVRM---KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV--MC 173
+A+ +FV+M + PD F+F V+ + + I Q+H V K+G C
Sbjct: 88 HHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLG-MQVHGLVYKFGADFHC 146
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
+ N L+ Y T +A K+F+E +S +D SW ++I GYV+ +
Sbjct: 147 ITE--NALIDMYTKFGDLT---------NACKVFEE--MSHRDVISWNSLIFGYVKLGQM 193
Query: 234 ASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 293
SAR+L D M V+W MI+GY R G Y +A D FR+M +GI+ DE + +++ A
Sbjct: 194 NSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPAC 253
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
G G+ +H Y + + NALI Y KCG + +A +FD++ +D+
Sbjct: 254 AQLGALEVGKWIHMYADKNGFLRKT----GICNALIEMYAKCGCIDEAWNLFDQLVEKDV 309
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQ 409
+SW+ ++ G N + EA +F E+ + N +T+ ++ + +G +E LK F+
Sbjct: 310 ISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDV 369
Query: 410 M 410
M
Sbjct: 370 M 370
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 53/362 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L +H + G + N LID+Y K ++ A +F++ + D+ S +L+ Y
Sbjct: 129 LGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYV 188
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G + A +LF+ PV R +S+ M+ Y A+ +F M+ G PD S
Sbjct: 189 KLGQMNSARELFDDMPV--RTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISI 246
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
VL A + + E + +H K G + + N L+ Y C +
Sbjct: 247 IAVLPACAQLGALEVG-KWIHMYADKNGFLRKTGICNALIEMYAKCGC---------IDE 296
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A LFD+ L +KD SW+TMI G HG
Sbjct: 297 AWNLFDQ--LVEKDVISWSTMIG-------------------------------GLANHG 323
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHF 320
EA F +M + + +E T+ ++ A +TGL++ G + + + ++P EH+
Sbjct: 324 KGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHY 383
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREV 379
LI + G L QA + KMP++ D WN++LS R L+ A +++
Sbjct: 384 -----GCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQL 438
Query: 380 PE 381
E
Sbjct: 439 ME 440
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMG-IQMDEYTYTSL 289
++ A L + HP +NA+I Y + + A F +M HS + D++T+ +
Sbjct: 58 VSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFV 117
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
I + G Q+H V + F NALI YTK G L A +VF++M
Sbjct: 118 IKSCTGILCHRLGMQVHGLVYKF----GADFHCITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
RD++SWN+++ GY+ ++ A+ +F ++P R +++WT MI+G G ++L +F +
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 410 MK 411
M+
Sbjct: 234 MQ 235
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 67/421 (15%)
Query: 6 MANLFLAQLNHPSATQ-------TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPY 58
MA +F+ +L + T T + IHAH++ + + +++D ++ Y
Sbjct: 1 MATIFIRELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSY 60
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
A LF + +P+IF+ YNA+++ Y+HN
Sbjct: 61 ATLLFKQLLHPNIFT---------------------------------YNAIIRTYAHNR 87
Query: 119 DGHAAVKLFVRM---KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV--MC 173
+A+ +FV+M + PD F+F V+ + + I Q+H V K+G C
Sbjct: 88 HHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLG-MQVHGLVYKFGADFHC 146
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
+ N L+ Y T +A K+F+E +S +D SW ++I GYV+ +
Sbjct: 147 ITE--NALIDMYTKFGDLT---------NACKVFEE--MSHRDVISWNSLIFGYVKLGQM 193
Query: 234 ASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 293
SAR+L D M V+W MI+GY R G Y +A D FR+M +GI+ DE + +++ A
Sbjct: 194 NSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPAC 253
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
G G+ +H Y + + NALI Y KCG + +A +FD++ +D+
Sbjct: 254 AQLGALEVGKWIHMYADKNGFLRKT----GICNALIEMYAKCGCIDEAWNLFDQLVEKDV 309
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQ 409
+SW+ ++ G N + EA +F E+ + N +T+ ++ + +G +E LK F+
Sbjct: 310 ISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDV 369
Query: 410 M 410
M
Sbjct: 370 M 370
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 53/362 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L +H + G + N LID+Y K ++ A +F++ + D+ S +L+ Y
Sbjct: 129 LGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYV 188
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G + A +LF+ PV R +S+ M+ Y A+ +F M+ G PD S
Sbjct: 189 KLGQMNSARELFDDMPV--RTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISI 246
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
VL A + + E + +H K G + + N L+ Y C +
Sbjct: 247 IAVLPACAQLGALEVG-KWIHMYADKNGFLRKTGICNALIEMYAKCGC---------IDE 296
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A LFD+ L +KD SW+TMI G HG
Sbjct: 297 AWNLFDQ--LVEKDVISWSTMIG-------------------------------GLANHG 323
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHF 320
EA F +M + + +E T+ ++ A +TGL++ G + + + ++P EH+
Sbjct: 324 KGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHY 383
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREV 379
LI + G L QA + KMP++ D WN++LS R L+ A +++
Sbjct: 384 -----GCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQL 438
Query: 380 PE 381
E
Sbjct: 439 ME 440
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMG-IQMDEYTYTSL 289
++ A L + HP +NA+I Y + + A F +M HS + D++T+ +
Sbjct: 58 VSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFV 117
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
I + G Q+H V + F NALI YTK G L A +VF++M
Sbjct: 118 IKSCTGILCHRLGMQVHGLVYKF----GADFHCITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
RD++SWN+++ GY+ ++ A+ +F ++P R +++WT MI+G G ++L +F +
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 410 MK 411
M+
Sbjct: 234 MQ 235
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 24 ARAIHAHILTTGFRLT-PLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
A+ + +H+ F+ T I N+L+ +Y K I A LFDK DI+S LLSAY+
Sbjct: 49 AKRLQSHMELQLFQPTDSFIHNQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYA 108
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ +F+ + RD++SYN M+ ++ N A++ FVRM+ DGF P +S+
Sbjct: 109 KVGLVEDLNLVFDR--MACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSY 166
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
L A S + + +Q+H VV V N + Y C +
Sbjct: 167 VNALQACSQLLDFRLG-KQIHGRVVVGEFEKNVFVWNAVTDLYAKCGD---------IDR 216
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVR--------------------------------- 229
AR LFD + K+ SW MI+GYV+
Sbjct: 217 ARWLFD--GMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAY 274
Query: 230 --NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
+ + AR + D + + W MI GY + G E+A F +M ++ D +T +
Sbjct: 275 FQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTIS 334
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
+++S+ G+ +H V+ V + + V++AL+ Y KCG + AR +F+
Sbjct: 335 TVVSSCAKLASLYHGQAVHGKVILMGVDSN----MLVSSALVDMYCKCGVPLDARVIFET 390
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEES 403
MP+++++ WN+++ GY EEA ++ + + N +++ ++S + +E
Sbjct: 391 MPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEG 450
Query: 404 LKLFNQM 410
K F+ +
Sbjct: 451 RKHFDSI 457
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 145/376 (38%), Gaps = 87/376 (23%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN-------------- 68
L + IH ++ F + N + D+Y K +I A LFD N
Sbjct: 181 LGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYV 240
Query: 69 ---------------------PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISY 107
PD + +++L+AY +G V A +F+ + +D I +
Sbjct: 241 KMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFD--KIDKKDEICW 298
Query: 108 NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVV 167
M+ Y+ + A+ LF M R PD + STV+ + + +A +H Q +H V+
Sbjct: 299 TTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLA-SLYHGQAVHGKVI 357
Query: 168 KWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY 227
GV V + L+ Y C + AR +F+ P+ K+ W +MI GY
Sbjct: 358 LMGVDSNMLVSSALVDMYCKCG---------VPLDARVIFETMPI--KNVIIWNSMILGY 406
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
+N G EEA + +M + D ++
Sbjct: 407 AQN-------------------------------GEAEEALTLYERMLQENFKPDNISFV 435
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFD 346
++SA NT + GR+ + + P+ +H+ +I + G + +A ++
Sbjct: 436 GVLSACINTNMVKEGRKHFDSISEQGMTPTLDHYA-----CMIILLGRSGNIDKALDLIK 490
Query: 347 KMPVR-DLVSWNAILS 361
MP + D W+A+LS
Sbjct: 491 GMPHKPDCRIWSALLS 506
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
YT L+ + FN ++L +++ + QP++ FI +N L+ Y KCGK+ A+++F
Sbjct: 33 YTRLVLHCAQSNDFNQAKRLQSHMELQLFQPTDSFI---HNQLLHLYAKCGKISDAQQLF 89
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 405
DKM RD+ SWNA+LS Y +E+ +F + R+ +++ MI+ A + ++L+
Sbjct: 90 DKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALR 149
Query: 406 LFNQMK 411
F +M+
Sbjct: 150 FFVRMQ 155
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 46/233 (19%)
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
N LL Y C ++ A++LFD+ +S++D SW +++ Y + +
Sbjct: 70 NQLLHLYAKCGK---------ISDAQQLFDK--MSKRDIYSWNALLSAYAKVGLVEDLNL 118
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+ D M +V++N MI+ + + L +A F +M G + +Y+Y + + A
Sbjct: 119 VFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLD 178
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
F G+Q+H R VV E + V NA+ Y KCG
Sbjct: 179 FRLGKQIHG---RVVVGEFEKNVF-VWNAVTDLYAKCGD--------------------- 213
Query: 359 ILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ A+++F + +NL++W +MISG + G +E + FN+M+
Sbjct: 214 ----------IDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQ 256
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 193/392 (49%), Gaps = 41/392 (10%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N ++ + + ++ A LF+K P+P+ S T+L ++ G + A KLF+ P ++
Sbjct: 208 NLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPC--KN 265
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE----EEWHC 159
+S+NAM+ AY +L AVKLF ++ D S++T++ + + E +
Sbjct: 266 VVSWNAMIAAYVQDLQIDEAVKLF----KETPYKDCVSWTTMINGYVRVGKLDEAREVYN 321
Query: 160 QQLHCDVV-KWGVMC----------VPSVLNTLLSCYICCASSTLVE--SPVLMASARKL 206
Q + DV K +M V + L C +S + M+ A L
Sbjct: 322 QMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNL 381
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F + P+ K+ SW TMI+GY + ++ A ++ + M ++WN++I+G++++GLY +
Sbjct: 382 FRQMPV--KNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLD 439
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI--LSV 324
A + M G + D+ T+ +S+ N G+QLH +L++ +I L V
Sbjct: 440 ALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKS------GYINDLFV 493
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE------ 378
+NALI Y KCG + A +VF + DL+SWN+++SGY EA + F +
Sbjct: 494 SNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGT 553
Query: 379 VPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
VP+ +T+ M+S + +G + + LF M
Sbjct: 554 VPDE--VTFIGMLSACSHAGLTNQGVDLFKCM 583
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 45/373 (12%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y ++ + AH LFD D FS +++ Y+ G ++ A +LF P L D
Sbjct: 83 NTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKL-D 141
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL------GAMSLIAEEEW 157
T +NAM+ Y+ A K+F +M D S++++L G M L + +
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMP----VKDLVSYNSMLAGYTQNGKMGLAMK--F 195
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+ +VV W +M V N L SA +LF++ P +
Sbjct: 196 FERMAERNVVSWNLMVAGFVNNCDL------------------GSAWELFEKIP--DPNA 235
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW TM+ G+ R+ + ARKL D M V+WNAMI+ YV+ +EA F++
Sbjct: 236 VSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETP-- 293
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
D ++T++I+ G + R+++ + P + ++ AL++ + G+
Sbjct: 294 --YKDCVSWTTMINGYVRVGKLDEAREVYNQM------PYKD--VAAKTALMSGLIQNGR 343
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+ +A +VF ++ RD + WN++++GY + R+ EA +FR++P +N ++W MISG A++
Sbjct: 344 IDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQA 403
Query: 398 GFGEESLKLFNQM 410
G + + ++F M
Sbjct: 404 GEMDRATEIFEAM 416
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 66/369 (17%)
Query: 43 RNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR 102
+N+ I K I A +F + + + ++++ ++ G V A +LF+ ++ R
Sbjct: 20 QNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFD--KMSQR 77
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRM-KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
+ +S+N M+ Y HN A KLF M +RD F+
Sbjct: 78 NLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFS------------------------- 112
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
W +M ++CY ++ AR+LF+ P + D W
Sbjct: 113 -------WALM---------ITCYT---------RKGMLEKARELFELVP-DKLDTACWN 146
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
MIAGY + A K+ + M V++N+M++GY ++G A F +M +
Sbjct: 147 AMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNV-- 204
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
++ +++ N NC + + P+ ++ ++ + + GK+V+A
Sbjct: 205 --VSWNLMVAGFVN----NCDLGSAWELFEKIPDPNAVSWVT----MLCGFARHGKIVEA 254
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 401
R++FD+MP +++VSWNA+++ Y+ +++EA +F+E P ++ ++WT MI+G G +
Sbjct: 255 RKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLD 314
Query: 402 ESLKLFNQM 410
E+ +++NQM
Sbjct: 315 EAREVYNQM 323
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 73/386 (18%)
Query: 30 HILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKL 89
H+ T R + + N +I Y ++S A +LFD+ P D+FS +L+ Y +
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 90 AEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM 149
A +LF+ P +D +S+N+++ Y+ N A ++F M + S++ +L A
Sbjct: 130 ARRLFDLMPE--KDVVSWNSLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAY 183
Query: 150 SLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
E C + D++ W N L+ ++ + AR
Sbjct: 184 VHNGRIEEACLLFESKSDWDLISW---------NCLMGGFV---------RKKKLGDARW 225
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE 265
LFD+ P+ +D SW TMI+GY + L+ AR+L D W AM+SGYV++G+ +
Sbjct: 226 LFDKMPV--RDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLD 283
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
EA F +M + +E +Y
Sbjct: 284 EAKTFFDEMP----EKNEVSY--------------------------------------- 300
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
NA+I Y + K+ ARE+F+ MP R++ SWN +++GY + +A+ F +P+R+ +
Sbjct: 301 NAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCV 360
Query: 386 TWTVMISGLAESGFGEESLKLFNQMK 411
+W +I+G A+SG EE+L +F ++K
Sbjct: 361 SWAAIIAGYAQSGHYEEALNMFVEIK 386
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 91/416 (21%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N ++ Y ++ + A LFD P D+ S +LLS Y+ G V A ++F+ P ++
Sbjct: 115 NVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE--KN 172
Query: 104 TISYNAMVKAYSHNLDGHAAVKLF------------------VRMKRDGFAP-------- 137
+IS+N ++ AY HN A LF VR K+ G A
Sbjct: 173 SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPV 232
Query: 138 -DPFSFSTVLGAMS----LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
D S++T++ + L + DV W M V N +L A +
Sbjct: 233 RDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDE----AKTF 288
Query: 193 LVESP-----------------VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
E P M AR+LF+ P ++ SW TMI GY + D+A
Sbjct: 289 FDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPC--RNISSWNTMITGYGQIGDIAQ 346
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
ARK D M V+W A+I+GY + G YEEA + F ++ G ++ T+ +S +
Sbjct: 347 ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCAD 406
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+Q+H ++ V NAL+ Y KCG + +A + F+ + +D+VS
Sbjct: 407 IAALELGKQIHGQAVKMGYGTG----CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS 462
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
WN +L+GY A GFG ++L +F MK
Sbjct: 463 WNTMLAGY-------------------------------ARHGFGRQALTVFESMK 487
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P + WN IS ++R+G + A F M + +Y ++IS FN R L
Sbjct: 47 PDILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
Q E + S N ++T Y + +L AR +FD MP +D+VSWN++LSGY
Sbjct: 103 FD-------QMPERDLFSW-NVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLF 407
++EA+ +F +PE+N ++W +++ +G EE+ LF
Sbjct: 155 NGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF 196
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 34/379 (8%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF------NATPV 99
L+ +Y K + I A LFD + D+ + +++ YS GNV A+++F P
Sbjct: 4 LVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEP- 62
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
+ +S+N M+ + + AV+LF M +GF PD + S VL + + E+
Sbjct: 63 ---NLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNL-EDVLMG 118
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+Q+H V+K G+ V++ LL Y C + ++FDE + Q + S
Sbjct: 119 KQVHGYVIKLGLESDKYVVSALLDMYGRCGCA---------PEMSRVFDE--IDQTEIGS 167
Query: 220 WTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ G RN + +A +K G V W ++I+ V++G EA + FR M
Sbjct: 168 LNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQ 227
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+ G++ + T SLI A N G+++H + LR + + V +ALI Y C
Sbjct: 228 ADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDD----VYVGSALIDMYANC 283
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMI 391
G++ ++ FD+MP R+LVSWN+I+SGY + +E +F + + + +T+T ++
Sbjct: 284 GRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVL 343
Query: 392 SGLAESGFGEESLKLFNQM 410
S ++G EE FN M
Sbjct: 344 SACTQNGLTEEGWHYFNSM 362
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 14/217 (6%)
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGY 258
A+KLFD + +D W+ MIAGY R ++ A+++ M P V+WN MI+G+
Sbjct: 17 AQKLFD--GMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGF 74
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
GLY+EA F +M S G D T + ++ N G+Q+H YV++ ++ S+
Sbjct: 75 GNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLE-SD 133
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
+++S AL+ Y +CG + VFD++ ++ S NA L+G ++ A +F++
Sbjct: 134 KYVVS---ALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKK 190
Query: 379 VP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E N++TWT +I+ ++G E+L+LF M+
Sbjct: 191 FKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQ 227
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 146/345 (42%), Gaps = 55/345 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ + +H +++ G + + L+D+Y + P +FD+ +I S L+ S
Sbjct: 117 MGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLS 176
Query: 83 AAGNVKLAE---KLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
G V A K F A + L + +++ +++ + N A++LF M+ DG P+
Sbjct: 177 RNGLVDTALDVFKKFKAGELEL-NVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNA 235
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+ +++ A I+ H +++HC ++ G+ V + L+ Y C L
Sbjct: 236 VTIPSLIPACGNISALT-HGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRL------ 288
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
++ FDE P RN V+WN+++SGY
Sbjct: 289 ---SQNCFDEMPF----------------RN-----------------LVSWNSIMSGYA 312
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQPS- 317
HG +E + F M G + D T+TS++SA GL G ++ V+P
Sbjct: 313 MHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKM 372
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
EH+ ++T ++ GKL +A + +MP D W A+LS
Sbjct: 373 EHYA-----CMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 412
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPE 381
++L+ Y KC ++ A+++FD M RD++ W+A+++GY ++ AK +F +E E
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQM 410
NL++W MI+G G +E+++LF++M
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEM 90
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 191/391 (48%), Gaps = 31/391 (7%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNV 87
H + +GF + N+LI +Y K + AH LFD+ P+P+ +S L+ AY A N+
Sbjct: 15 HVQAIKSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNL 74
Query: 88 KLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA--AVKLFVRMK--RDGFAPDPFSFS 143
A +F++ RD +SYN+M+ AY DG+ AV LF +M+ RD D FS +
Sbjct: 75 TQARAVFDSA--VDRDLVSYNSMLSAYV-GADGYETEAVDLFDKMQSARDMIGIDEFSLT 131
Query: 144 TVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
T++ + L+ + +Q+H +VK ++L++ Y C L +
Sbjct: 132 TMVNFSAKLRLVC----YGKQMHSYMVKTASDLSKFASSSLINMYSKCG---LFRDACSV 184
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI--AVAWNAMISGY 258
S FD D S M+A R ++ A + H + V+WN +I+GY
Sbjct: 185 VSG---FDGVV----DLVSKNAMVAACCREGEMDMALNVF-WKNHELNDTVSWNTLIAGY 236
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++G ++A F KM G++ DE+T S++S G+ +HA+VL+ S
Sbjct: 237 AQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYN-SN 295
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
FI S ++ Y KCG + A V+ + ++ + ++++ GY + + +A+ +F
Sbjct: 296 QFISS---GIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDS 352
Query: 379 VPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
+ ERN + WT + SG A+S EE KLF +
Sbjct: 353 LLERNSVVWTALCSGYAKSQQCEEVFKLFRK 383
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 15/219 (6%)
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
L+ A KLFDE P + SW +I Y++ +L AR + D V++N+M+S Y
Sbjct: 42 LLKDAHKLFDEIP--HPNAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSYNSMLSAY 99
Query: 259 VRHGLYE-EAFDTFRKMHSMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
V YE EA D F KM S I +DE++ T++++ S L G+Q+H+Y+++T
Sbjct: 100 VGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMHSYMVKTASD 159
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREV---FDKMPVRDLVSWNAILSGYINARRLEEA 372
S+ +++LI Y+KCG A V FD V DLVS NA+++ ++ A
Sbjct: 160 LSKF----ASSSLINMYSKCGLFRDACSVVSGFD--GVVDLVSKNAMVAACCREGEMDMA 213
Query: 373 KFIFREVPERN-LLTWTVMISGLAESGFGEESLKLFNQM 410
+F + E N ++W +I+G A++G+ +++L LF +M
Sbjct: 214 LNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKM 252
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 181/398 (45%), Gaps = 29/398 (7%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL---FDKTPNPDIFSRTTLLSA 80
+ +H++++ T L+ + LI++Y K A + FD D+ S+ +++A
Sbjct: 146 GKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVV--DLVSKNAMVAA 203
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
G + +A +F L DT+S+N ++ Y+ N A+ LFV+M G D
Sbjct: 204 CCREGEMDMALNVFWKNH-ELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEH 262
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ ++VL S + + + +H V+K + + ++ Y C + E
Sbjct: 263 TLASVLSVCSGLKHLKLG-KCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVY-- 319
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A + K + + +++I GY ++ A++L D + +V W A+ SGY +
Sbjct: 320 ---------AGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAK 370
Query: 261 HGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
EE F FRK + + D ++ A + G+Q+H Y+LR ++ +
Sbjct: 371 SQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKK 430
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRD--LVSWNAILSGYINARRLEEAKFIFR 377
+ +A++ Y+KCG ++ A + F M RD ++ +N +++GY + +A +F
Sbjct: 431 LL----SAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFH 486
Query: 378 EVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
++ ++N+ +T+ ++S G E+ F M+
Sbjct: 487 DMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISME 524
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 139/343 (40%), Gaps = 51/343 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +HA +L + I + ++D+YCK NI YA ++ F+ ++L+ YS
Sbjct: 279 LGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYS 338
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR-MKRDGFAPDPFS 141
+ G + A++LF++ + R+++ + A+ Y+ + KLF + + R+ PD
Sbjct: 339 SQGEMMKAQRLFDS--LLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMI 396
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
VLGA + A +Q+H +++ + +L+ ++ Y C + E +
Sbjct: 397 IIRVLGACATQATLSLG-KQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLM 455
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
+ R +D + MIA GY H
Sbjct: 456 TDR---------DRDVILYNVMIA-------------------------------GYAHH 475
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS-EHF 320
G +A F M ++ D T+ +L+SA + GL G + V P H+
Sbjct: 476 GFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMEDYSVLPEINHY 535
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
++ Y + +L +A E K+P++ D W A L+
Sbjct: 536 A-----CMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNA 573
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N LI Y+K G L A ++FD++P + SWNA++ YI A+ L +A+ +F +R+L+
Sbjct: 31 NQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLV 90
Query: 386 TWTVMISG-LAESGFGEESLKLFNQMK 411
++ M+S + G+ E++ LF++M+
Sbjct: 91 SYNSMLSAYVGADGYETEAVDLFDKMQ 117
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 49/370 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ HA I TGF T + N L+ YCK N+ YA ++FDK P D+ S T++ Y+
Sbjct: 57 GKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG 116
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
GN++ A+ LF++ P RD +S+N+M+ Y N ++++F +M+ D +F+
Sbjct: 117 VGNMEFAQFLFDSMPE--RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFA 174
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
VL A + I E+ Q+HC ++ G L+ Y C + A
Sbjct: 175 VVLKACTGI-EDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKK---------LDHA 224
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+F E P +++ W+ +IAGYVRND KL
Sbjct: 225 FNIFCEMP--ERNSVCWSAVIAGYVRNDRFTEGLKL------------------------ 258
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
++ M G+ + + T+ S + F G QLHAY L+T + +
Sbjct: 259 -------YKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKT----NFGYDNI 307
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V A + Y KC ++V AR+VF+ P S NA++ GY ++ EA IFR + +
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 384 LLTWTVMISG 393
L + +SG
Sbjct: 368 LDFDEISLSG 377
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+I T+L Y+ G + A +F+ + ++D +S+NA++ A+ N + LFV
Sbjct: 406 NICVANTILDMYAKCGALMEACLIFD--DMEIKDAVSWNAIIAAHEQNEHVEETLALFVS 463
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R PD ++F +V+ A + + ++H V+K G+ V + ++ Y C
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYG-MEVHGRVIKSGMGLDWFVGSAIIDMY--CK 520
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
LVE A K+ + + V
Sbjct: 521 CGMLVE----------------------------------------AEKIHERLEERTTV 540
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN++ISG+ E A F +M +G+ D +TY +++ N G+Q+H +
Sbjct: 541 SWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI 600
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+ + H + + + ++ Y+KCG + +R +F+K P RD V+W+A++ Y
Sbjct: 601 LKLQL----HSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 370 EEAKFIFREVPERNLL-TWTVMISGL---AESGFGEESLKLFNQMK 411
E+A +F E+ +N+ T+ IS L A GF ++ L F +M+
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMR 702
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T++ + N N G+Q HA + T P+ + V+N L+ FY KC L A V
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPT----VFVSNCLLQFYCKCLNLNYAFNV 95
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
FDKMP RD++SWN ++ GY +E A+F+F +PER++++W M+S ++GF +S+
Sbjct: 96 FDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSI 155
Query: 405 KLFNQMK 411
++F +M+
Sbjct: 156 EIFTKMR 162
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L Y+ + A K+FN P R S+NA++ Y+ A+++F +++
Sbjct: 310 TATLDMYAKCDRMVDARKVFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
D S S L A S I + QLH VK G+ V NT+L Y C +
Sbjct: 368 LDFDEISLSGALTACSAI-KGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGA---- 422
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ A +FD+ + KD SW +IA + +N+ +
Sbjct: 423 -----LMEACLIFDDMEI--KDAVSWNAIIAAHEQNEHV--------------------- 454
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
EE F M ++ D+YT+ S++ A N G ++H V+++ +
Sbjct: 455 ----------EETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
V +A+I Y KCG LV+A ++ +++ R VSWN+I+SG+ + ++ E A
Sbjct: 505 GLD----WFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 141/340 (41%), Gaps = 88/340 (25%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H ++ +G L + + +ID+YCK + A
Sbjct: 495 VHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE-------------------------- 528
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
K+ E+L R T+S+N+++ +S G A+ F RM + G PD F+++TVL
Sbjct: 529 -KIHERLEE------RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVL 581
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ +A E +Q+H ++K + + +T++ Y C + M +R +
Sbjct: 582 DICANLATVELG-KQIHGQILKLQLHSDVYIASTIVDMYSKCGN---------MQDSRIM 631
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F++AP ++D +W+ AMI Y HGL E+
Sbjct: 632 FEKAP--KRDYVTWS-------------------------------AMICAYAYHGLGED 658
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRT--VVQPS-EHFIL 322
A F +M ++ + + S++ A + G + G LH + +R+ + P EH+
Sbjct: 659 AIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG--LHYFREMRSHYGLDPQMEHY-- 714
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ ++ + G++ +A E+ + MP D V W +L
Sbjct: 715 ---SCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 49/370 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ HA I TGF T + N L+ YCK N+ YA ++FDK P D+ S T++ Y+
Sbjct: 57 GKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG 116
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
GN++ A+ LF++ P RD +S+N+M+ Y N ++++F +M+ D +F+
Sbjct: 117 VGNMEFAQFLFDSMPE--RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFA 174
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
VL A + I E+ Q+HC ++ G L+ Y C + A
Sbjct: 175 VVLKACTGI-EDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKK---------LDHA 224
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+F E P +++ W+ +IAGYVRND KL
Sbjct: 225 FNIFCEMP--ERNSVCWSAVIAGYVRNDRFTEGLKL------------------------ 258
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
++ M G+ + + T+ S + F G QLHAY L+T + +
Sbjct: 259 -------YKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKT----NFGYDNI 307
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V A + Y KC ++V AR+VF+ P S NA++ GY ++ EA IFR + +
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 384 LLTWTVMISG 393
L + +SG
Sbjct: 368 LDFDEISLSG 377
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+I T+L Y+ G + A +F+ + ++D +S+NA++ A+ N + LFV
Sbjct: 406 NICVANTILDMYAKCGALMEACLIFD--DMEIKDAVSWNAIIAAHEQNEHVEETLALFVS 463
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R PD ++F +V+ A + + ++H V+K G+ V + ++ Y C
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYG-MEVHGRVIKSGMGLDWFVGSAIIDMY--CK 520
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
LVE A K+ + + V
Sbjct: 521 CGMLVE----------------------------------------AEKIHERLEERTTV 540
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN++ISG+ E A F +M +G+ D +TY +++ N G+Q+H +
Sbjct: 541 SWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI 600
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+ + H + + + ++ Y+KCG + +R +F+K P RD V+W+A++ Y
Sbjct: 601 LKLQL----HSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 370 EEAKFIFREVPERNLL-TWTVMISGL---AESGFGEESLKLFNQMK 411
E+A +F E+ +N+ T+ IS L A GF ++ L F +M+
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMR 702
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T++ + N N G+Q HA + T P+ + V+N L+ FY KC L A V
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPT----VFVSNCLLQFYCKCLNLNYAFNV 95
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
FDKMP RD++SWN ++ GY +E A+F+F +PER++++W M+S ++GF +S+
Sbjct: 96 FDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSI 155
Query: 405 KLFNQMK 411
++F +M+
Sbjct: 156 EIFTKMR 162
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L Y+ + A K+FN P R S+NA++ Y+ A+++F +++
Sbjct: 310 TATLDMYAKCDRMVDARKVFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
D S S L A S I + QLH VK G+ V NT+L Y C +
Sbjct: 368 LDFDEISLSGALTACSAI-KGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGA---- 422
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ A +FD+ + KD SW +IA + +N+ +
Sbjct: 423 -----LMEACLIFDDMEI--KDAVSWNAIIAAHEQNEHV--------------------- 454
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
EE F M ++ D+YT+ S++ A N G ++H V+++ +
Sbjct: 455 ----------EETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
V +A+I Y KCG LV+A ++ +++ R VSWN+I+SG+ + ++ E A
Sbjct: 505 GLD----WFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 141/340 (41%), Gaps = 88/340 (25%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H ++ +G L + + +ID+YCK + A
Sbjct: 495 VHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE-------------------------- 528
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
K+ E+L R T+S+N+++ +S G A+ F RM + G PD F+++TVL
Sbjct: 529 -KIHERLEE------RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVL 581
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ +A E +Q+H ++K + + +T++ Y C + M +R +
Sbjct: 582 DICANLATVELG-KQIHGQILKLQLHSDVYIASTIVDMYSKCGN---------MQDSRIM 631
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F++AP ++D +W+ AMI Y HGL E+
Sbjct: 632 FEKAP--KRDYVTWS-------------------------------AMICAYAYHGLGED 658
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRT--VVQPS-EHFIL 322
A F +M ++ + + S++ A + G + G LH + +R+ + P EH+
Sbjct: 659 AIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG--LHYFREMRSHYGLDPQMEHY-- 714
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ ++ + G++ +A E+ + MP D V W +L
Sbjct: 715 ---SCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 204/440 (46%), Gaps = 100/440 (22%)
Query: 51 CKSSN-IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
C+ S + LFD P D S T++S Y+ G + A ++F + P R+ +S NA
Sbjct: 113 CRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPE--RNVVSCNA 170
Query: 110 MVKAYSHNLDGHAAVKLFVRM-KRD------------------------------GFAPD 138
+V + N D +AV F +M +RD G D
Sbjct: 171 VVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKD 230
Query: 139 P--FSFSTVL-----------------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
++++T++ G MS E ++L +VV W N
Sbjct: 231 DLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSW---------N 281
Query: 180 TLLSCYI-------------------CCASSTLVESPVL---MASARKLFDEAPLSQKDE 217
+++ CY+ C+ +T++ V M A KLF E P+ D
Sbjct: 282 SMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIP--DV 339
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW ++I+G+ + DL ++ + M H ++WN++I+GY ++ Y+ A + F +M
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLK 399
Query: 278 GIQMDEYTYTSLISASFNTGLFN--CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G + D +T +S++S S TGL + G+Q+H +V +TVV L +NN+LIT Y++C
Sbjct: 400 GERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKTVVPD-----LPINNSLITMYSRC 452
Query: 336 GKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVM 390
G++ AR VF++M + +D+++WNA++ GY +A +F + + +T+ +
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 391 ISGLAESGFGEESLKLFNQM 410
++ A +G EE + FN M
Sbjct: 513 LNACAHAGLVEEGKRQFNSM 532
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 88/364 (24%)
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G + A LF++T R+T+++N+M+ Y + A +LF M P
Sbjct: 52 GRLTAARTLFDST--NHRNTVTWNSMITGYVQRREIAKARQLFDEM--------PLR--- 98
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
D+V W N ++S Y C S VE R
Sbjct: 99 --------------------DIVSW---------NLIISGYFSCRGSRFVEE------GR 123
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
KLFD P Q+D SW T+I+GY +N + A ++ + M V+ NA+++G++ +G
Sbjct: 124 KLFDIMP--QRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 265 EEAFDTFRKMH----------------------------SMGIQMDE-----YTYTSLIS 291
+ A FRKM G + DE Y Y +LI+
Sbjct: 182 DSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIA 241
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSE-HFILSVN----NALITFYTKCGKLVQAREVFD 346
G+ R + V+ + +E L N N+++ Y K G +V ARE+FD
Sbjct: 242 GYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFD 301
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
+M RD SWN ++ GY+ +EEA +F E+P ++L+W +ISG ++ G + +
Sbjct: 302 RMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 407 FNQM 410
F M
Sbjct: 362 FENM 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ +R L +AR L D H V WN+MI+GYV+ +A F +M I
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI---- 100
Query: 284 YTYTSLISASFN---TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
++ +IS F+ + GR+L + P + N +I+ Y K G++ Q
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFD------IMPQRDCVSW--NTVISGYAKNGRMDQ 152
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
A E+F+ MP R++VS NA+++G++ ++ A FR++ ER+ + + ++SGL +G
Sbjct: 153 AIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N I+ + G+L AR +FD R+ V+WN++++GY+ R + +A+ +F E+P R+++
Sbjct: 42 NKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIV 101
Query: 386 TWTVMISGL---AESGFGEESLKLFNQM 410
+W ++ISG S F EE KLF+ M
Sbjct: 102 SWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
L+D+Y H KT PD+ +L++ YS G + A +FN + +D I
Sbjct: 418 LVDLYLGKQ----IHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKL-YKDVI 472
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++NAM+ Y+ + A++LF RMK P +F +VL A + E +Q +
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSM 532
Query: 166 VVKWGV 171
+ +G+
Sbjct: 533 INDYGI 538
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 204/440 (46%), Gaps = 100/440 (22%)
Query: 51 CKSSN-IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
C+ S + LFD P D S T++S Y+ G + A ++F + P R+ +S NA
Sbjct: 113 CRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPE--RNVVSCNA 170
Query: 110 MVKAYSHNLDGHAAVKLFVRM-KRD------------------------------GFAPD 138
+V + N D +AV F +M +RD G D
Sbjct: 171 VVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKD 230
Query: 139 P--FSFSTVL-----------------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
++++T++ G MS E ++L +VV W N
Sbjct: 231 DLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSW---------N 281
Query: 180 TLLSCYI-------------------CCASSTLVESPVL---MASARKLFDEAPLSQKDE 217
+++ CY+ C+ +T++ V M A KLF E P+ D
Sbjct: 282 SMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIP--DV 339
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW ++I+G+ + DL ++ + M H ++WN++I+GY ++ Y+ A + F +M
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLK 399
Query: 278 GIQMDEYTYTSLISASFNTGLFN--CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G + D +T +S++S S TGL + G+Q+H +V +TVV L +NN+LIT Y++C
Sbjct: 400 GERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKTVVPD-----LPINNSLITMYSRC 452
Query: 336 GKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVM 390
G++ AR VF++M + +D+++WNA++ GY +A +F + + +T+ +
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 391 ISGLAESGFGEESLKLFNQM 410
++ A +G EE + FN M
Sbjct: 513 LNACAHAGLVEEGKRQFNSM 532
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 88/364 (24%)
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G + A LF++T R+T+++N+M+ Y + A +LF M P
Sbjct: 52 GRLTAARTLFDST--NHRNTVTWNSMITGYVQRREIAKARQLFDEM--------PLR--- 98
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
D+V W N ++S Y C S VE R
Sbjct: 99 --------------------DIVSW---------NLIISGYFSCRGSRFVEE------GR 123
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
KLFD P Q+D SW T+I+GY +N + A ++ + M V+ NA+++G++ +G
Sbjct: 124 KLFDIMP--QRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 265 EEAFDTFRKMH----------------------------SMGIQMDE-----YTYTSLIS 291
+ A FRKM G + DE Y Y +LI+
Sbjct: 182 DSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIA 241
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSE-HFILSVN----NALITFYTKCGKLVQAREVFD 346
G+ R + V+ + +E L N N+++ Y K G +V ARE+FD
Sbjct: 242 GYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFD 301
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
+M RD SWN ++ GY+ +EEA +F E+P ++L+W +ISG ++ G + +
Sbjct: 302 RMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 407 FNQM 410
F M
Sbjct: 362 FENM 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ +R L +AR L D H V WN+MI+GYV+ +A F +M I
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI---- 100
Query: 284 YTYTSLISASFN---TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
++ +IS F+ + GR+L + P + N +I+ Y K G++ Q
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFD------IMPQRDCVSW--NTVISGYAKNGRMDQ 152
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
A E+F+ MP R++VS NA+++G++ ++ A FR++ ER+ + + ++SGL +G
Sbjct: 153 AIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N I+ + G+L AR +FD R+ V+WN++++GY+ R + +A+ +F E+P R+++
Sbjct: 42 NKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIV 101
Query: 386 TWTVMISGL---AESGFGEESLKLFNQM 410
+W ++ISG S F EE KLF+ M
Sbjct: 102 SWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
L+D+Y H KT PD+ +L++ YS G + A +FN + +D I
Sbjct: 418 LVDLYLGKQ----IHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKL-YKDVI 472
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++NAM+ Y+ + A++LF RMK P +F +VL A + E +Q +
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSM 532
Query: 166 VVKWGV 171
+ +G+
Sbjct: 533 INDYGI 538
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 204/440 (46%), Gaps = 100/440 (22%)
Query: 51 CKSSN-IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
C+ S + LFD P D S T++S Y+ G + A ++F + P R+ +S NA
Sbjct: 113 CRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPE--RNVVSCNA 170
Query: 110 MVKAYSHNLDGHAAVKLFVRM-KRD------------------------------GFAPD 138
+V + N D +AV F +M +RD G D
Sbjct: 171 VVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKD 230
Query: 139 P--FSFSTVL-----------------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
++++T++ G MS E ++L +VV W N
Sbjct: 231 DLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSW---------N 281
Query: 180 TLLSCYI-------------------CCASSTLVESPVL---MASARKLFDEAPLSQKDE 217
+++ CY+ C+ +T++ V M A KLF E P+ D
Sbjct: 282 SMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIP--DV 339
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW ++I+G+ + DL ++ + M H ++WN++I+GY ++ Y+ A + F +M
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLK 399
Query: 278 GIQMDEYTYTSLISASFNTGLFN--CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G + D +T +S++S S TGL + G+Q+H +V +TVV L +NN+LIT Y++C
Sbjct: 400 GERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKTVVPD-----LPINNSLITMYSRC 452
Query: 336 GKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVM 390
G++ AR VF++M + +D+++WNA++ GY +A +F + + +T+ +
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 391 ISGLAESGFGEESLKLFNQM 410
++ A +G EE + FN M
Sbjct: 513 LNACAHAGLVEEGKRQFNSM 532
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 88/364 (24%)
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G + A LF++T R+T+++N+M+ Y + A +LF M P
Sbjct: 52 GRLTAARTLFDST--NHRNTVTWNSMITGYVQRREIAKARQLFDEM--------PLR--- 98
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
D+V W N ++S Y C S VE R
Sbjct: 99 --------------------DIVSW---------NLIISGYFSCRGSRFVEE------GR 123
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
KLFD P Q+D SW T+I+GY +N + A ++ + M V+ NA+++G++ +G
Sbjct: 124 KLFDIMP--QRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 265 EEAFDTFRKMH----------------------------SMGIQMDE-----YTYTSLIS 291
+ A FRKM G + DE Y Y +LI+
Sbjct: 182 DSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIA 241
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSE-HFILSVN----NALITFYTKCGKLVQAREVFD 346
G+ R + V+ + +E L N N+++ Y K G +V ARE+FD
Sbjct: 242 GYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFD 301
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
+M RD SWN ++ GY+ +EEA +F E+P ++L+W +ISG ++ G + +
Sbjct: 302 RMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 407 FNQM 410
F M
Sbjct: 362 FENM 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ +R L +AR L D H V WN+MI+GYV+ +A F +M I
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI---- 100
Query: 284 YTYTSLISASFN---TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
++ +IS F+ + GR+L + P + N +I+ Y K G++ Q
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFD------IMPQRDCVSW--NTVISGYAKNGRMDQ 152
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
A E+F+ MP R++VS NA+++G++ ++ A FR++ ER+ + + ++SGL +G
Sbjct: 153 AIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N I+ + G+L AR +FD R+ V+WN++++GY+ R + +A+ +F E+P R+++
Sbjct: 42 NKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIV 101
Query: 386 TWTVMISGL---AESGFGEESLKLFNQM 410
+W ++ISG S F EE KLF+ M
Sbjct: 102 SWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
L+D+Y H KT PD+ +L++ YS G + A +FN + +D I
Sbjct: 418 LVDLYLGKQ----IHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKL-YKDVI 472
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++NAM+ Y+ + A++LF RMK P +F +VL A + E +Q +
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSM 532
Query: 166 VVKWGV 171
+ +G+
Sbjct: 533 INDYGI 538
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 204/440 (46%), Gaps = 100/440 (22%)
Query: 51 CKSSN-IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
C+ S + LFD P D S T++S Y+ G + A ++F + P R+ +S NA
Sbjct: 113 CRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPE--RNVVSCNA 170
Query: 110 MVKAYSHNLDGHAAVKLFVRM-KRD------------------------------GFAPD 138
+V + N D +AV F +M +RD G D
Sbjct: 171 VVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKD 230
Query: 139 P--FSFSTVL-----------------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
++++T++ G MS E ++L +VV W N
Sbjct: 231 DLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSW---------N 281
Query: 180 TLLSCYI-------------------CCASSTLVESPVL---MASARKLFDEAPLSQKDE 217
+++ CY+ C+ +T++ V M A KLF E P+ D
Sbjct: 282 SMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIP--DV 339
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW ++I+G+ + DL ++ + M H ++WN++I+GY ++ Y+ A + F +M
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLK 399
Query: 278 GIQMDEYTYTSLISASFNTGLFN--CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G + D +T +S++S S TGL + G+Q+H +V +TVV L +NN+LIT Y++C
Sbjct: 400 GERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKTVVPD-----LPINNSLITMYSRC 452
Query: 336 GKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVM 390
G++ AR VF++M + +D+++WNA++ GY +A +F + + +T+ +
Sbjct: 453 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 512
Query: 391 ISGLAESGFGEESLKLFNQM 410
++ A +G EE + FN M
Sbjct: 513 LNACAHAGLVEEGKRQFNSM 532
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 88/364 (24%)
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G + A LF++T R+T+++N+M+ Y + A +LF M P
Sbjct: 52 GRLTAARTLFDST--NHRNTVTWNSMITGYVQRREIAKARQLFDEM--------PLR--- 98
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
D+V W N ++S Y C S VE R
Sbjct: 99 --------------------DIVSW---------NLIISGYFSCRGSRFVEE------GR 123
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
KLFD P Q+D SW T+I+GY +N + A ++ + M V+ NA+++G++ +G
Sbjct: 124 KLFDIMP--QRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDV 181
Query: 265 EEAFDTFRKMH----------------------------SMGIQMDE-----YTYTSLIS 291
+ A FRKM G + DE Y Y +LI+
Sbjct: 182 DSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIA 241
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSE-HFILSVN----NALITFYTKCGKLVQAREVFD 346
G+ R + V+ + +E L N N+++ Y K G +V ARE+FD
Sbjct: 242 GYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFD 301
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
+M RD SWN ++ GY+ +EEA +F E+P ++L+W +ISG ++ G + +
Sbjct: 302 RMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 407 FNQM 410
F M
Sbjct: 362 FENM 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ +R L +AR L D H V WN+MI+GYV+ +A F +M I
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDI---- 100
Query: 284 YTYTSLISASFN---TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
++ +IS F+ + GR+L + P + N +I+ Y K G++ Q
Sbjct: 101 VSWNLIISGYFSCRGSRFVEEGRKLFD------IMPQRDCVSW--NTVISGYAKNGRMDQ 152
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
A E+F+ MP R++VS NA+++G++ ++ A FR++ ER+ + + ++SGL +G
Sbjct: 153 AIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N I+ + G+L AR +FD R+ V+WN++++GY+ R + +A+ +F E+P R+++
Sbjct: 42 NKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIV 101
Query: 386 TWTVMISGL---AESGFGEESLKLFNQM 410
+W ++ISG S F EE KLF+ M
Sbjct: 102 SWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
L+D+Y H KT PD+ +L++ YS G + A +FN + +D I
Sbjct: 418 LVDLYLGKQ----IHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKL-YKDVI 472
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++NAM+ Y+ + A++LF RMK P +F +VL A + E +Q +
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSM 532
Query: 166 VVKWGV 171
+ +G+
Sbjct: 533 INDYGI 538
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 193/399 (48%), Gaps = 38/399 (9%)
Query: 39 TPLIRNRLIDIYCKSSNIPYAHHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLFNAT 97
TP + N +I+ Y ++N+ AH L D+ + +I S +++AY + LF+
Sbjct: 8 TPQL-NYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKM 66
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
P L+D +S+N M+ + + + F++M R G P+ ++ ST+L A+ + E +
Sbjct: 67 P--LKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAV-ISTELDV 123
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYI-------------------CCASSTLVESPV 198
+Q+H G V ++L+ Y + + LV S +
Sbjct: 124 LVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYM 183
Query: 199 LMA---SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ A+ FD+ P Q++ SWTT++ GYV+N + AR + D M+ V+W AMI
Sbjct: 184 ELGKFVDAQTAFDQMP--QRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMI 241
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
SGYV++ + +A F M + + +T++S++ A + G QLH ++++ +
Sbjct: 242 SGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIA 301
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY----INARRLEE 371
++ S L+ Y KCG + A VF+ + ++LVSWNAI+ GY + R LEE
Sbjct: 302 NDVIWLTS----LVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEE 357
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + V + +T+ ++S +G EE K F M
Sbjct: 358 FDRM-KVVGTPDEVTFVNVLSACVHAGLVEEGEKHFTDM 395
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 205/440 (46%), Gaps = 100/440 (22%)
Query: 51 CKSSN-IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
C+ S + LFD P D S T++S Y+ G + A ++F + P R+ +S NA
Sbjct: 39 CRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPE--RNVVSCNA 96
Query: 110 MVKAYSHNLDGHAAVKLFVRM-KRD------------------------------GFAPD 138
+V + N D +AV F +M +RD G D
Sbjct: 97 VVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKD 156
Query: 139 P--FSFSTVL-----------------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
++++T++ G MS E ++L +VV W N
Sbjct: 157 DLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSW---------N 207
Query: 180 TLLSCYI-------------------CCASSTLVESPVL---MASARKLFDEAPLSQKDE 217
+++ CY+ C+ +T++ V M A KLF E P+ D
Sbjct: 208 SMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIP--DV 265
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW ++I+G+ + DL ++ + M H ++WN++I+GY ++ Y+ A + F +M
Sbjct: 266 LSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLK 325
Query: 278 GIQMDEYTYTSLISASFNTGLFN--CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G + D +T +S++S S TGL + G+Q+H +V +TVV P L +NN+LIT Y++C
Sbjct: 326 GERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKTVV-PD----LPINNSLITMYSRC 378
Query: 336 GKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVM 390
G++ AR VF++M + +D+++WNA++ GY +A +F + + +T+ +
Sbjct: 379 GEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISV 438
Query: 391 ISGLAESGFGEESLKLFNQM 410
++ A +G EE + FN M
Sbjct: 439 LNACAHAGLVEEGKRQFNSM 458
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 55/284 (19%)
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
D+V W N ++S Y C S VE RKLFD P Q+D SW T+I
Sbjct: 25 DIVSW---------NLIISGYFSCRGSRFVEE------GRKLFDIMP--QRDCVSWNTVI 67
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH--------- 275
+GY +N + A ++ + M V+ NA+++G++ +G + A FRKM
Sbjct: 68 SGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSG 127
Query: 276 -------------------SMGIQMDE-----YTYTSLISASFNTGLFNCGRQLHAYVLR 311
G + DE Y Y +LI+ G+ R + V+
Sbjct: 128 LVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMS 187
Query: 312 TVVQPSE-HFILSVN----NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
+ +E L N N+++ Y K G +V ARE+FD+M RD SWN ++ GY+
Sbjct: 188 DQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQI 247
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+EEA +F E+P ++L+W +ISG ++ G + + F M
Sbjct: 248 GDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENM 291
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 328 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR---LEEAKFIFREVPERNL 384
+IT Y + ++ +AR++FD+MP+RD+VSWN I+SGY + R +EE + +F +P+R+
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 385 LTWTVMISGLAESGFGEESLKLFNQM 410
++W +ISG A++G ++++++F M
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESM 86
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 44/178 (24%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY--VRHGLYEEAFDTFRKMHSMGIQ 280
MI GYV+ ++A AR+L D M V+WN +ISGY R + E RK+ + Q
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVE---EGRKLFDIMPQ 57
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D ++ ++IS Y K G++ Q
Sbjct: 58 RDCVSWNTVISG---------------------------------------YAKNGRMDQ 78
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
A E+F+ MP R++VS NA+++G++ ++ A FR++ ER+ + + ++SGL +G
Sbjct: 79 AIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 136
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
L+D+Y H KT PD+ +L++ YS G + A +FN + +D I
Sbjct: 344 LVDLYLGKQ----IHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKL-YKDVI 398
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++NAM+ Y+ + A++LF RMK P +F +VL A + E +Q +
Sbjct: 399 TWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSM 458
Query: 166 VVKWGV 171
+ +G+
Sbjct: 459 INDYGI 464
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 172/386 (44%), Gaps = 80/386 (20%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +HA I+ G L +L+ + ++ YAH LFD+ P P+ F
Sbjct: 53 KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFM----------- 101
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
+N ++K YS++ D ++ L+ RM DG P+ F+
Sbjct: 102 ----------------------FNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPF 139
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
VL A + W +H K G+ V N +L+ Y+ C L+ SAR
Sbjct: 140 VLKACA-AKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACG---------LITSAR 189
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
++FD+ +S++ SW + MI+GY + G
Sbjct: 190 RVFDD--ISERTLVSWNS-------------------------------MINGYSKMGRS 216
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
EEA FR+M +G++ D +T L+S S G F+ GR +H +++ T ++ V
Sbjct: 217 EEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDS----IV 272
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
NAL+ Y KCG L A+ VFD+M +D+VSW +++ Y N ++ A F ++P +N+
Sbjct: 273 TNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNV 332
Query: 385 LTWTVMISGLAESGFGEESLKLFNQM 410
++W +I + G E++ LF +M
Sbjct: 333 VSWNSIIWCHVQEGLYAEAVDLFYRM 358
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 22/341 (6%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+ +L+ Y A G + A ++F+ ++ R +S+N+M+ YS AV +F M+
Sbjct: 172 QNAILNIYVACGLITSARRVFD--DISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEV 229
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G PD F+ +L + + + +H +V G+ V N L+ Y C +
Sbjct: 230 GLEPDVFTLVGLLSVSTKHGNFDLG-RFVHLHMVVTGIEIDSIVTNALMDMYAKCGN--- 285
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ A+ +FD+ + KD SWT MI Y + + A + + M V+WN+
Sbjct: 286 ------LKCAKSVFDQ--MLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNS 337
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+I +V+ GLY EA D F +M G+ ++ T +++S+ + G G+Q H+Y+
Sbjct: 338 IIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNN 397
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+ S ++ NA+I Y KCG L A +VF MP ++ VSWN I+ +EA
Sbjct: 398 ITLSA----TLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAI 453
Query: 374 FIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+F ++ + +T+T ++S + SG + F M
Sbjct: 454 EMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIM 494
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 161/364 (44%), Gaps = 57/364 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +H H++ TG + ++ N L+D+Y K N+ A +FD+ + D+ S T +++AY+
Sbjct: 253 LGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYA 312
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG--HAAVKLFVRMKRDGFAPDPF 140
G + A + FN P ++ +S+N+++ + H +G AV LF RM G +
Sbjct: 313 NHGLIDCALEFFNQMPG--KNVVSWNSII--WCHVQEGLYAEAVDLFYRMCDSGVMANDT 368
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ +L + S + + +Q H + + ++ N ++ Y C +
Sbjct: 369 TLVAILSSCSHMGDLALG-KQAHSYIFDNNITLSATLCNAIIDMYAKCGA---------- 417
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
L +A + GM AV+WN +I
Sbjct: 418 --------------------------------LQTAMDVFFGMPEKNAVSWNVIIGALAL 445
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-E 318
HG +EA + F KM + G+ DE T+T L+SA ++GL + G+ + T + P E
Sbjct: 446 HGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVE 505
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFR 377
H+ ++ + G L +A + KMPV+ D+V W+A+L L K I +
Sbjct: 506 HY-----ACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMK 560
Query: 378 EVPE 381
++ E
Sbjct: 561 QLLE 564
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 177/395 (44%), Gaps = 56/395 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HAH + G + N LI Y +I LF++ D+ + T ++ Y
Sbjct: 286 GKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYME 345
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G V L K+F+ P ++ ++YN ++ N +G AV+LF+RM +G FS S
Sbjct: 346 FGFVDLGLKIFDEMPE--KNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLS 403
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ + A SL+A+ +Q+H +K+G S+ VE +L
Sbjct: 404 SGINACSLLADYRV-SRQMHGFAIKFGF-----------------GSNVFVEGALLDM-- 443
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
Y R + A K+ + + +V W +M+ GY R+G
Sbjct: 444 -----------------------YTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQ 480
Query: 264 YEEAFDTFRKMHS-MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EAF F HS + MDE TS++S G + G+Q+H VL+ H +
Sbjct: 481 PREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKF----GFHSNV 536
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
V N ++ Y KCG + A ++F M D+VSWN ++SGY+ R+ + A I+ ++ E
Sbjct: 537 QVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEE 596
Query: 383 NL----LTWTVMISGLAESGFG--EESLKLFNQMK 411
+ +T+ ++IS ++ ++ LFN MK
Sbjct: 597 GIKPDDITFVLIISAYRQTSLNLVDDCRILFNSMK 631
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 166/339 (48%), Gaps = 53/339 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLF-NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM-KR 132
T L+S Y A +LF + +P + +SY+A++ A+S + ++ LF+ M
Sbjct: 102 TALISTYINLRLFSYAHRLFLSQSPPNI---VSYSALISAFSKSNREKQSLFLFLHMITV 158
Query: 133 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
P+ +++ VL A + I ++ Q LH V+K G + V N L+ Y C
Sbjct: 159 SSLRPNHYTYVAVLTACTRILNLQFGLQ-LHAAVIKTGYLKSVFVSNALMLFYSKCG--- 214
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+A K+FDE P D+AS WN
Sbjct: 215 ------FYKNAFKVFDEMP------------------ERDIAS---------------WN 235
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
++S V+ +Y++ F F M + G+++D +T ++ ++A +GL G+Q+HA+ ++
Sbjct: 236 TVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVK 295
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++ L+V NALI FYT G + +F++M VRD+++W ++ Y+ ++
Sbjct: 296 VGLEDE----LNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDL 351
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
IF E+PE+N +T+ V++SGL + G ++++LF +M
Sbjct: 352 GLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRM 390
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 25/310 (8%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F L+ YS G K A K+F+ P RD S+N ++ +LF M
Sbjct: 200 VFVSNALMLFYSKCGFYKNAFKVFDEMPE--RDIASWNTVMSCAVQEFMYDDVFRLFCDM 257
Query: 131 KR-DGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
DG D F+ ST L A L+ E +Q+H VK G+ +V N L+ Y
Sbjct: 258 LVIDGLKVDYFTLSTFLTACAASGLLMEG----KQVHAHAVKVGLEDELNVGNALIGFYT 313
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
++ V LF+ +S +D +WT M+ Y+ + K+ D M
Sbjct: 314 NFGD---IDDVVC------LFER--MSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEK 362
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V +N ++SG R+ +A + F +M G+++ +++ +S I+A + RQ+H
Sbjct: 363 NCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMH 422
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
+ ++ + + V AL+ YT+CG++V A ++++++ V W +++ GY
Sbjct: 423 GFAIKFGFGSN----VFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARN 478
Query: 367 RRLEEAKFIF 376
+ EA +F
Sbjct: 479 GQPREAFSLF 488
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 61/397 (15%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKS--SNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IHAH T ++ +L S ++ YAH++FD+ P P F
Sbjct: 24 KLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFF--------- 74
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
YN +++A+SH+ + F RM+R+ APD FSF
Sbjct: 75 ------------------------YNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSF 110
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ +L + S +H V K+G V N L+ Y + S
Sbjct: 111 TFLLKSRSFTMPL---VHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTI---------S 158
Query: 203 ARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
ARK+F++A D SW+ ++ + + +L ARK+ DGM V+W M+S Y +
Sbjct: 159 ARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSK 218
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
E D F++M G+ DE T S+ISA G GR +H + V + +
Sbjct: 219 AKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKF----VEENGFGW 274
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL-----SGYI-NARRLEEAKF 374
++++ N+LI Y KCG L +A +VFD+ + L++WNA++ GY +A RL E
Sbjct: 275 MVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMI 334
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
VP+ +T ++ A GF +E ++LF M+
Sbjct: 335 GSGVVPDG--VTILALLVAYAHKGFVDEGIRLFESMQ 369
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 61/397 (15%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKS--SNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IHAH T ++ +L S ++ YAH++FD+ P P F
Sbjct: 24 KLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFF--------- 74
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
YN +++A+SH+ + F RM+R+ APD FSF
Sbjct: 75 ------------------------YNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSF 110
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ +L + S +H V K+G V N L+ Y + S
Sbjct: 111 TFLLKSRSFTMPL---VHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTI---------S 158
Query: 203 ARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
ARK+F++A D SW+ ++ + + +L ARK+ DGM V+W M+S Y +
Sbjct: 159 ARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSK 218
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
E D F++M G+ DE T S+ISA G GR +H + V + +
Sbjct: 219 AKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKF----VEENGFGW 274
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL-----SGYI-NARRLEEAKF 374
++++ N+LI Y KCG L +A +VFD+ + L++WNA++ GY +A RL E
Sbjct: 275 MVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMI 334
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
VP+ +T ++ A GF +E ++LF M+
Sbjct: 335 GSGVVPDG--VTILALLVAYAHKGFVDEGIRLFESMQ 369
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 54/349 (15%)
Query: 50 YCKS-SNIPYAH----HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDT 104
+C+S +I AH HL T NP IF R L AY+ ++ A++LF+ P RD
Sbjct: 72 HCRSPKSIAAAHKVEFHLVATTRNPPIFLRNRALEAYAKCSSLHDAQELFDEMPQ--RDG 129
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC 164
S+NA++ AYS A+ LF+ M +DG + +F++VLG+ + + E QQ+H
Sbjct: 130 GSWNALITAYSRLRYPDEAISLFLWMNKDGVRANNITFASVLGSCADVYELSLS-QQVHG 188
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
VVK+G + + L+ Y C +M AR++F E P
Sbjct: 189 LVVKFGFSSNVIIGSALVDVYAKCG---------IMVYARRMFHEIP------------- 226
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
P AV WN ++ Y+ G +EA F +M S G++ +
Sbjct: 227 --------------------RPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNF 266
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+++ + A + G Q+H VV+ H V+++LI Y KCG+L V
Sbjct: 267 TFSNALVACSSMHALEEGMQIHG----GVVKWGLHEDTVVSSSLINMYVKCGELENGFRV 322
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 393
F ++ +DLV W I+SGY + + +A+ +F ++P RN+++W M++G
Sbjct: 323 FHQLGSKDLVCWTCIVSGYAMSGKTWDARKLFDQMPVRNVISWNAMLAG 371
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 154/341 (45%), Gaps = 50/341 (14%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+L++ +H ++ GF +I + L+D+Y K + YA +F + P P+
Sbjct: 181 SLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPN----------- 229
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+++N +V+ Y D AV LF RM DG P F+
Sbjct: 230 ----------------------AVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFT 267
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
FS L A S + E Q+H VVKWG+ V ++L++ Y+ C +
Sbjct: 268 FSNALVACSSMHALE-EGMQIHGGVVKWGLHEDTVVSSSLINMYVKCGE---------LE 317
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
+ ++F + L KD WT +++GY + ARKL D M ++WNAM++GY R
Sbjct: 318 NGFRVFHQ--LGSKDLVCWTCIVSGYAMSGKTWDARKLFDQMPVRNVISWNAMLAGYTRF 375
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+ EA D M +D T +I+ S G+QLH +V R H
Sbjct: 376 FKWSEALDFVCLMLDTVKDLDHVTLGLMINVSAGLLDHEMGKQLHGFVYRH----GFHSN 431
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILS 361
L V NA++ Y KCG L AR F+ M RD VSWNA+L+
Sbjct: 432 LMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRVSWNALLA 472
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 53/388 (13%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH ++ G ++ + LI++Y K + +F + + D+ T ++S Y+ +G
Sbjct: 287 IHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSGK 346
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
A KLF+ PV R+ IS+NAM+ Y+ A+ M D + ++
Sbjct: 347 TWDARKLFDQMPV--RNVISWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDHVTLGLMI 404
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ + + E +QLH V + G V N +L Y C + + SAR
Sbjct: 405 NVSAGLLDHEMG-KQLHGFVYRHGFHSNLMVGNAILDMYGKCGN---------LNSAR-- 452
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
W +++ + V+WNA+++ H E+
Sbjct: 453 ------------VWFNLMSNWRDR------------------VSWNALLASCGLHHSSEQ 482
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
F +M + +YT+ +L++A NT + G+Q+H +++R Q +
Sbjct: 483 TLTMFSEMQWEA-KPSKYTFGTLLAACANTYSLHLGKQIHGFIIRHEFQIDS----VIRT 537
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPER 382
ALI Y KC L A E+ RD++ WN ++ G + R +A +F E +
Sbjct: 538 ALIYMYCKCYCLEYAVEILKGAVSRDVIMWNTLILGCCHNHRGRDALELFGIMEAEGIKP 597
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +T+ ++ E G E + F M
Sbjct: 598 DRVTFEGILLACVEEGLVEFGTQCFESM 625
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 171 VMCVPSVLNTLLSCYICCASSTLVE------------------SPVLMASARKLFDEAPL 212
V + S+LN L S +I A+S L + SP +A+A K+
Sbjct: 32 VEVIQSILNCLKSGHIQKAASILFDFPLPFPHSLYAHFFRHCRSPKSIAAAHKVEFHLVA 91
Query: 213 SQKDEPSW--TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
+ ++ P + + Y + L A++L D M +WNA+I+ Y R +EA
Sbjct: 92 TTRNPPIFLRNRALEAYAKCSSLHDAQELFDEMPQRDGGSWNALITAYSRLRYPDEAISL 151
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
F M+ G++ + T+ S++ + + + +Q+H V++ + + + +AL+
Sbjct: 152 FLWMNKDGVRANNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSN----VIIGSALVD 207
Query: 331 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
Y KCG +V AR +F ++P + V+WN I+ Y++ +EA +F
Sbjct: 208 VYAKCGIMVYARRMFHEIPRPNAVTWNVIVRRYLDVGDAKEAVLLF 253
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 65/420 (15%)
Query: 6 MANLFLAQLNHPSATQTLARA--------IHAHILTTGFRLTPLIRNRLIDIYC--KSSN 55
M L L QLN L R IH +L G L +RL+ Y + SN
Sbjct: 1 MGTLQLLQLNVEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSN 60
Query: 56 IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
+ YA +FD+ +P+ T+ +N M++AYS
Sbjct: 61 LTYARMVFDRISSPN---------------------------------TVMWNTMIRAYS 87
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCV 174
++ D A+ L+ +M + ++F +L A S L A E H Q+H ++K G
Sbjct: 88 NSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETH--QIHVQIIKRGFGSE 145
Query: 175 PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
N+LL Y S + SA LFD P +D SW TMI GY++ ++
Sbjct: 146 VYATNSLLRVYAISGS---------IKSAHVLFDLLP--SRDIVSWNTMIDGYIKCGNVE 194
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
A K+ M ++W +MI G+VR G+++EA ++M GI+ D+ T + +SA
Sbjct: 195 MAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACA 254
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
G G+ +H Y+ + ++ + ALI Y KCG++ +A VF K+ + +
Sbjct: 255 GLGALEQGKWIHTYIGKNKIKIDP----VLGCALIDMYVKCGEMKKALLVFSKLEKKCVY 310
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+W AI+ G+ + EA F ++ + + T+T +++ + +G EE LF M
Sbjct: 311 TWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESM 370
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 158/378 (41%), Gaps = 65/378 (17%)
Query: 18 SATQTLARA--IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRT 75
SA LA IH I+ GF N L+ +Y S +I AH LFD P+ DI S
Sbjct: 122 SALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWN 181
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
T++ Y GNV++A K+F A P ++ IS+ +M+ + A+ L +M G
Sbjct: 182 TMIDGYIKCGNVEMAYKIFQAMPE--KNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGI 239
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PD + S L A + + E KW + YI + +
Sbjct: 240 KPDKITLSCSLSACAGLGALEQG---------KW------------IHTYI--GKNKIKI 276
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
PVL + +I YV+ ++ A + + W A+I
Sbjct: 277 DPVLGCA--------------------LIDMYVKCGEMKKALLVFSKLEKKCVYTWTAII 316
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA-----YVL 310
G+ HG EA D F +M GI+ +T+T++++A +TGL G+ L Y +
Sbjct: 317 GGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNM 376
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRL 369
+ V+ EH+ ++ + G L +A+E + MP++ + W ++L+ + L
Sbjct: 377 KPVM---EHY-----GCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHL 428
Query: 370 EE----AKFIFREVPERN 383
E KF+ PE +
Sbjct: 429 ELGKEIGKFLIELDPEHD 446
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 196/428 (45%), Gaps = 63/428 (14%)
Query: 29 AHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP------------------- 69
AH+L +G+ +RN ++ IY K I +A LFD+ P+
Sbjct: 123 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 182
Query: 70 ----------------DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKA 113
++ + TT+++ ++ GN+K A F+ P R +S+NAM+
Sbjct: 183 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE--RSVVSWNAMLSG 240
Query: 114 YSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLGAMSLIAE---EEWHCQQLHCDVVKW 169
Y+ ++LF M G PD ++ TV+ + S + + E ++L V
Sbjct: 241 YAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTV--- 297
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ-KDEPSWTTMIAGYV 228
G V LL + C + + +A K+F++ + + + W MI+ Y
Sbjct: 298 GFRPNYFVKTALLDMHAKCGN---------LEAAHKIFEQLGVYKYRSSVPWNAMISAYA 348
Query: 229 RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYT 287
R DL SAR L D M V+WN+MI+GY ++G +A F +M S + DE T
Sbjct: 349 RVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMV 408
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
S+ SA + G G + + +Q S +SV N+LI+ Y++CG + A +F +
Sbjct: 409 SVFSACGHLGELGLGNWAVSILKENHIQIS----ISVYNSLISMYSRCGSMQDAVLIFQE 464
Query: 348 MPVRDLVSWNAILSGYI-NARRLEEAKFIFR---EVPERNLLTWTVMISGLAESGFGEES 403
M RDLVS+N ++SG+ + +E + + + + E + +T+ +++ + +G E
Sbjct: 465 MATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEG 524
Query: 404 LKLFNQMK 411
+LF +K
Sbjct: 525 QRLFESIK 532
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 172/370 (46%), Gaps = 46/370 (12%)
Query: 58 YAHHLFDKTPNPDIFSRTTLLSAYSAAG-NVKLAEKLF-------NATPVTLRDTISYNA 109
Y H+F +PD+ T +L YS G ++ LF N P +T Y+
Sbjct: 54 YTCHIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKP----NTSFYSV 109
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD---- 165
M+K+ G ++ + + G+ D + + +LG + E+ ++L +
Sbjct: 110 MMKS-----AGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEF-ARKLFDEMPDR 163
Query: 166 -VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
V W VM +S Y C + + + +++ ++ +WTTMI
Sbjct: 164 TVADWNVM---------ISGYWKCGNEEEASTLFHVMGDQEI-------SRNVITWTTMI 207
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDE 283
G+ + +L +AR D M V+WNAM+SGY + G EE F M S G +Q DE
Sbjct: 208 TGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDE 267
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
T+ ++IS+ + G + + TV +F V AL+ + KCG L A +
Sbjct: 268 TTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYF---VKTALLDMHAKCGNLEAAHK 324
Query: 344 VFDKMPV---RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
+F+++ V R V WNA++S Y L A+ +F ++P+R+ ++W MI+G ++G
Sbjct: 325 IFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGES 384
Query: 401 EESLKLFNQM 410
+++KLF +M
Sbjct: 385 VKAIKLFEEM 394
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 68/348 (19%)
Query: 12 AQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI 71
+ L P ++++ R + T GFR ++ L+D++ K N+ AH +F++
Sbjct: 278 SSLGDPCLSESIVRKLDD---TVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 334
Query: 72 FSR---TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
S ++SAY+ G++ A LF+ P RDT+S+N+M+ Y+ N + A+KLF
Sbjct: 335 RSSVPWNAMISAYARVGDLPSARHLFDKMP--QRDTVSWNSMIAGYTQNGESVKAIKLFE 392
Query: 129 RM-KRDGFAPDPFSFSTVLGAMSLIAE---EEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
M + PD + +V A + E W L + ++ + SV N+L+S
Sbjct: 393 EMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISI----SVYNSLISM 448
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
Y C S M A +F E + DL S
Sbjct: 449 YSRCGS---------MQDAVLIFQE------------------MATRDLVS--------- 472
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
+N +ISG+ HG E+ + KM GI+ D TY ++++A + GL G++
Sbjct: 473 ------YNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQR 526
Query: 305 LHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
L ++ P +H+ +I + G+L +A ++ MP+
Sbjct: 527 L----FESIKFPDVDHYA-----CMIDMLGRAGRLEEAMKLIQSMPME 565
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 168/369 (45%), Gaps = 56/369 (15%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N ++ Y +S A FD P ++ S T +LS Y+ G + A K+F+ P R+
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPE--RN 164
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+S+N+MV N D A K+F PD
Sbjct: 165 VVSWNSMVVGLIRNGDLEEARKVFDD------TPDK------------------------ 194
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+VV W M V N M A+ LFD+ + ++ +WT+M
Sbjct: 195 -NVVSWNAMIEGYVENGR------------------MDDAKDLFDQ--IECRNVITWTSM 233
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMD 282
I+GY R D+ A +L M V+W AMI G+ +G Y EA F M ++ + +
Sbjct: 234 ISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPN 293
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E T+ SL+ A G G+QLHA ++ + + + + +L+ Y+ CG + AR
Sbjct: 294 EETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDD-YDCRLGRSLVRMYSVCGLMDSAR 352
Query: 343 EVFD-KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 401
VF+ M D S+N++++GY+ A +L +A+ +F VP RN + WT MISG +G
Sbjct: 353 SVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVL 412
Query: 402 ESLKLFNQM 410
++ LF+ M
Sbjct: 413 KASNLFDDM 421
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 196/411 (47%), Gaps = 62/411 (15%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I+ Y ++ + A LFD+ ++ + T+++S Y G+V A +LF P ++
Sbjct: 200 NAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPE--KN 257
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPFSFSTVLGAMSLIAEEEWHC--Q 160
+S+ AM+ ++ N A+ LF+ M A P+ +F +++ A + + + C +
Sbjct: 258 VVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMG---FPCLGK 314
Query: 161 QLHCDVV--KW--------------------GVM-------------CVPSVLNTLLSCY 185
QLH ++ +W G+M C N++++ Y
Sbjct: 315 QLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGY 374
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM-- 243
+ + A++LFD P+ +++ +WT MI+GY+ + A L D M
Sbjct: 375 VQAGQ---------LHKAQELFDTVPI--RNKIAWTCMISGYLSAGQVLKASNLFDDMPD 423
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
+ ++AW MI GYV++ L EA + F +M + G TY L A + + G
Sbjct: 424 SDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGW 483
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
QLHA L+T+ + + + + N+LI+ Y KCG++ A +F M RD +SWN+++ G
Sbjct: 484 QLHAMQLKTIYE--YEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGL 541
Query: 364 INARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ R EA ++ + E + +T+ +++ A +GF ++ +LF+ M
Sbjct: 542 SDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVM 592
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 105/191 (54%), Gaps = 12/191 (6%)
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
WT+M+ Y ++ + AR L D M H V +NAM+S Y++ G+ +A F M +
Sbjct: 75 WTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNV 134
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
++T+++S G + R++ + E ++S N+ ++ + G L
Sbjct: 135 ----VSWTAMLSGYAGLGWIDDARKVFD-------EMPERNVVSWNSMVVGL-IRNGDLE 182
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
+AR+VFD P +++VSWNA++ GY+ R+++AK +F ++ RN++TWT MISG G
Sbjct: 183 EARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGD 242
Query: 400 GEESLKLFNQM 410
E+ +LF M
Sbjct: 243 VNEAFRLFQIM 253
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 18/190 (9%)
Query: 227 YVRNDDLASARKLL----DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
Y+ N L AR +L G H V W +M++ Y +HG E+A + F M I
Sbjct: 47 YLTNGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNI--- 103
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYV-LRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
TY +++SA +G+ ++ + R VV + A+++ Y G + A
Sbjct: 104 -VTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWT---------AMLSGYAGLGWIDDA 153
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 401
R+VFD+MP R++VSWN+++ G I LEEA+ +F + P++N+++W MI G E+G +
Sbjct: 154 RKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMD 213
Query: 402 ESLKLFNQMK 411
++ LF+Q++
Sbjct: 214 DAKDLFDQIE 223
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I+ Y ++ + A LFD P + + T ++S Y +AG V A LF+ P + +D
Sbjct: 368 NSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKD 427
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIA--EEEWHCQQ 161
+I++ M+ Y N A+ LF M G +P +++ + GA+ +A + W Q
Sbjct: 428 SIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGW---Q 484
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
LH M + ++ Y+
Sbjct: 485 LH-------AMQLKTIYEYEYDVYL---------------------------------EN 504
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
++I+ Y + ++ A ++ M ++WN+MI G HG EA + + M G+
Sbjct: 505 SLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYP 564
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKLV 339
D T+ +++A + G + G +L + +L +QP EH++ ++I + G++
Sbjct: 565 DAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYV-----SIINILGRAGRVK 619
Query: 340 QAREVFDKMPVR-DLVSWNAILS 361
A E ++PV + W A++
Sbjct: 620 DAEEFVLRLPVEPNHTIWGALIG 642
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 172/344 (50%), Gaps = 19/344 (5%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P + T+ + + + +G + A KLF+ P RDT+++NAM+ AYS LF
Sbjct: 3 PCLIRATSEIVSLARSGRICHARKLFDEMPE--RDTVAWNAMLTAYSRLGLYQQTFDLFD 60
Query: 129 RMKR-DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M+R PD FS+S + + + ++ + +LH VV G V N L+ Y
Sbjct: 61 SMRRISDSKPDNFSYSAAINSCAGASDIRFG-TKLHSLVVVSGYQSSLPVANALIDMYGK 119
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + ARK+FDE ++ +E +W +++ Y A ++ M +
Sbjct: 120 CFNPN---------DARKVFDE--MNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKV 168
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+AWN +I+ + R G E F++M Q D++T+++L+SA + G +H
Sbjct: 169 EIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHC 228
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+V+++ + + VNN++++FY K A +VF+ + VSWNAI+ ++
Sbjct: 229 FVIKSGWSTA----MEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVG 284
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++A F++ PE+N+++WT MI G +G G+ +L LF MK
Sbjct: 285 DTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMK 328
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 179/388 (46%), Gaps = 22/388 (5%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H+ ++ +G++ + + N LID+Y K N A +FD+ + + +LL AY+
Sbjct: 94 LHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCR 153
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+A ++F + P + I++N ++ A++ + A + LF M + + PD ++FS ++
Sbjct: 154 FDMAFEIFRSMPEKVE--IAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALM 211
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A + + E H +HC V+K G V N+++S Y A K+
Sbjct: 212 SACTE-SMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFY---------AKLECHGDAVKV 261
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F+ ++ SW +I +++ D A V+W +MI GY R+G +
Sbjct: 262 FNSG--GAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDL 319
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A F M Q+D+ +++ A + + G+ +H+ ++ + L V N
Sbjct: 320 ALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDK----YLFVGN 375
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL-- 384
+LI Y KCG + ++ + +DLVSWN++L + R EA +FRE+ +
Sbjct: 376 SLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRP 435
Query: 385 --LTWTVMISGLAESGFGEESLKLFNQM 410
+T+T ++ + G +E F M
Sbjct: 436 DEVTFTGLLMTCSHLGLIDEGFAFFQSM 463
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 185/396 (46%), Gaps = 28/396 (7%)
Query: 24 ARAIHAHILTTGFRLT--PLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ +HA + GF ++ + +++ Y K ++ A + D FS + L+S Y
Sbjct: 180 GKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGY 239
Query: 82 SAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
+ AG + A K+F+ P + + +N+++ Y N + A+ LF +M+R+G D
Sbjct: 240 ANAGRMSDARKVFDNKVDPCS----VLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDF 295
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+ + +L S + E +Q+H K G V +TLL Y C + P
Sbjct: 296 SAVANILSISSSLLNVEL-VKQMHDHAFKIGATHDIVVASTLLDAYSKC------QHP-- 346
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ KLF E L D TMI Y + A+++ + M + ++WN+++ G
Sbjct: 347 -HDSCKLFHE--LKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLT 403
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++ EA DTF M+ + ++MD++++ S+ISA G QL + T+ S+
Sbjct: 404 QNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAI-TLGLESDQ 462
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
I + +L+ FY KCG + R+VFD M D VSWN +L GY EA +F E+
Sbjct: 463 IICT---SLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEM 519
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ +T+T ++S G EE LF MK
Sbjct: 520 GYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMK 555
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 206/431 (47%), Gaps = 69/431 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIR-NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY- 81
AR +H +L TG + +I NRL+ +Y + ++ A LFD+ P P+ FS TL+ A+
Sbjct: 13 ARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHI 72
Query: 82 ------------------------------SAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
S +G+++ A+ LFNA P +++ + +N+M+
Sbjct: 73 NLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMP--MKNPLVWNSMI 130
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAP---DPFSFSTVLGAMS-LIAEEEWHC-QQLHCDV 166
YS + ++ LF M D D F STV GA + L A + C +Q+H V
Sbjct: 131 HGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALD---CGKQVHARV 187
Query: 167 VKWG-------VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
G V+C +++++ Y C L ++AR + + + D+ S
Sbjct: 188 FIDGFEFEQDKVLC-----SSIVNFYGKCGD--------LDSAARVV---GFVKEVDDFS 231
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+ +++GY ++ ARK+ D P +V WN++ISGYV +G EA F KM G+
Sbjct: 232 LSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGV 291
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
D +++S S + +Q+H + + + H I+ V + L+ Y+KC
Sbjct: 292 WGDFSAVANILSISSSLLNVELVKQMHDHAFKI---GATHDIV-VASTLLDAYSKCQHPH 347
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
+ ++F ++ V D + N +++ Y N R+E+AK +F +P + L++W ++ GL ++
Sbjct: 348 DSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNAC 407
Query: 400 GEESLKLFNQM 410
E+L F+ M
Sbjct: 408 PSEALDTFSMM 418
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 10/227 (4%)
Query: 191 STLVESPVLMASARK---LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+TL+E+ + + K LF P K SW +++ ++ DL A+ L + M
Sbjct: 65 NTLIEAHINLGHRNKSLELFHAMP--HKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKN 122
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHS---MGIQMDEYTYTSLISASFNTGLFNCGRQ 304
+ WN+MI GY RHG + F++M+ + D + +++ A + +CG+Q
Sbjct: 123 PLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQ 182
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+HA V + + +L ++++ FY KCG L A V + D S +A++SGY
Sbjct: 183 VHARVFIDGFEFEQDKVLC--SSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYA 240
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
NA R+ +A+ +F + + W +ISG +G E+L LFN+M+
Sbjct: 241 NAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMR 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H H G ++ + L+D Y K + + LF + D T+++ Y
Sbjct: 313 LVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYC 372
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ A+++FN+ P + IS+N+++ + N A+ F M + D FSF
Sbjct: 373 NCGRVEDAKEVFNSMPN--KTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSF 430
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++V+ A C S+L L
Sbjct: 431 ASVISA--------------------------------------CAIKSSLELGEQLFGK 452
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A L E+ D+ T+++ Y + + RK+ DGM V+WN M+ GY +G
Sbjct: 453 AITLGLES-----DQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNG 507
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-----HAYVLRTVVQPS 317
EA F +M G++ T+T ++SA + GL GR L H Y + +
Sbjct: 508 YGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGI--- 564
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYIN 365
EH+ + ++ + + G +A + ++MP + D W ++L G ++
Sbjct: 565 EHY-----SCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVS 608
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 24/346 (6%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F +T L++ Y++ + A LF+ + D +++N ++ Y N A++LF
Sbjct: 155 DPFIQTGLIAMYASCRRIMDARLLFD--KMCHPDAVAWNMIIDGYCQNGHYDDALRLFED 212
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYICC 188
M+ PD TVL A + + +H + VK + S L T L++ Y C
Sbjct: 213 MRSSDMKPDSVILCTVLSACGHAGNLSYG-RTIH-EFVKDNGYAIDSHLQTALINMYANC 270
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ L ARK++D LS K T M++GY + + AR + D M
Sbjct: 271 GAMDL---------ARKIYD--GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDL 319
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V W+AMISGY +EA F +M D+ T S+ISA + G +H Y
Sbjct: 320 VCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTY 379
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
V R+ + LSVNNALI Y KCG LV+AREVF+ MP ++++SW+++++ +
Sbjct: 380 VDRSGFGRA----LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435
Query: 369 LEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ A +FR + E N+ +T+ ++ +G EE KLF+ M
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSM 481
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 150/347 (43%), Gaps = 59/347 (17%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ R IH + G+ + ++ LI++Y + A ++D + + T +LS Y
Sbjct: 239 SYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGY 298
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G VK A +F+ + RD + ++AM+ Y+ + A+KLF M + PD +
Sbjct: 299 AKLGMVKDARFIFD--QMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQIT 356
Query: 142 FSTVLGAMSLI---AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
+V+ A S + A+ W +H V + G SV N L+ Y C +
Sbjct: 357 MLSVISACSHVGALAQANW----IHTYVDRSGFGRALSVNNALIDMYAKCGN-------- 404
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
+ AR++F+ P +K+ SW++ MI+ +
Sbjct: 405 -LVKAREVFENMP--RKNVISWSS-------------------------------MINAF 430
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPS 317
HG + A FR+M + I+ + T+ ++ A + GL G +L + ++ + P+
Sbjct: 431 AMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPT 490
Query: 318 -EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
EH+ ++ Y + L +A E+ + MP +++ W +++S
Sbjct: 491 REHY-----GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSA 532
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLH--AYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
+D +++ SL+ A FN G ++H A L V P + LI Y C ++
Sbjct: 119 LDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDP------FIQTGLIAMYASCRRI 172
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 391
+ AR +FDKM D V+WN I+ GY ++A +F ++ ++ +V++
Sbjct: 173 MDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVIL 225
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 51/343 (14%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F +L+ Y+A G V L K+F+ + R+ +S+ +++ YS AV LF
Sbjct: 166 DLFVANSLIHFYAACGKVDLGRKVFD--EMLERNVVSWTSLINGYSVVNMAKEAVCLFFE 223
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVV-KWGVMCVPSVLNTLLSCYICC 188
M G P+P + + A + + + E + C+++ + GV V+N LL Y+ C
Sbjct: 224 MVEVGVEPNPVTMVCAISACAKLKDLEL--GKKVCNLMTELGVKSNTLVVNALLDMYMKC 281
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
M + R++FDE S K+
Sbjct: 282 GD---------MYAVREIFDE--FSDKN-------------------------------L 299
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V +N ++S YV+HGL E +M G + D+ T S I+A G + G+ HAY
Sbjct: 300 VMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAY 359
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
V R ++ ++ ++NA+I Y KCGK A +VFD M + +V+WN++++G +
Sbjct: 360 VFRNGLERLDN----ISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGE 415
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
LE A IF E+PE NL++W MI + ++ EE++ L +M+
Sbjct: 416 LELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQ 458
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 165/381 (43%), Gaps = 53/381 (13%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF 94
G + L+ N L+D+Y K ++ +FD+ + ++ T++S Y
Sbjct: 263 GVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNY------------- 309
Query: 95 NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE 154
H L G V L M + G PD + + + A + + +
Sbjct: 310 -------------------VQHGLAGEVLVVLD-EMLQKGQRPDKVTMLSTIAACAQLGD 349
Query: 155 EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
+ H V + G+ + ++ N ++ Y+ C +A K+FD +S
Sbjct: 350 LSVG-KSSHAYVFRNGLERLDNISNAIIDMYMKCGKRE---------AACKVFD--SMSN 397
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
K +W ++IAG VR+ +L A ++ M V+WN MI V+ ++EEA D R+M
Sbjct: 398 KTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREM 457
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
+ GI+ D T + SA G + + ++ Y+ + + H + + AL+ +++
Sbjct: 458 QNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDI----HIDMQLGTALVDMFSR 513
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVM 390
CG + A VF+ M RD+ +W A + + A +F E+ ++++ + +
Sbjct: 514 CGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVAL 573
Query: 391 ISGLAESGFGEESLKLFNQMK 411
++ + G+ ++ +LF M+
Sbjct: 574 LTAFSHGGYVDQGRQLFWAME 594
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 252 NAMISGYVRHGLYEEA-FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
N +I GY GL +EA F + MGI D +T+ L+SA F+ G Q+H V+
Sbjct: 100 NTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 159
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + L V N+LI FY CGK+ R+VFD+M R++VSW ++++GY +
Sbjct: 160 KMGLVKD----LFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAK 215
Query: 371 EAKFIFREVPE 381
EA +F E+ E
Sbjct: 216 EAVCLFFEMVE 226
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 195/429 (45%), Gaps = 64/429 (14%)
Query: 29 AHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP------------------- 69
AH+L +G+ +RN ++ IY K I +A LFD+ P+
Sbjct: 108 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 167
Query: 70 ----------------DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKA 113
++ + TT+++ ++ GN+K A F+ P R +S+NAM+
Sbjct: 168 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE--RSVVSWNAMLSG 225
Query: 114 YSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLGAMSLIAE---EEWHCQQLHCDVVKW 169
Y+ ++LF M G PD +++TV+ + S + + E ++L V
Sbjct: 226 YAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKV--- 282
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ-KDEPSWTTMIAGYV 228
G V LL + C + + +A K+F++ + + + W MI+ Y
Sbjct: 283 GFRPNYFVKTALLDMHAKCGN---------LEAAHKIFEQLGVYKYRSSVPWNAMISAYA 333
Query: 229 RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM--GIQMDEYTY 286
R DL SA+ L D M V+WN+MI+GY ++G +A F +M S + DE T
Sbjct: 334 RVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTM 393
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
S+ SA + G G + + +Q S +SV N+LI Y++CG + A +F
Sbjct: 394 VSVFSACGHLGELGLGNWAVSILKVNHIQIS----ISVYNSLINMYSRCGSMQDAVLIFQ 449
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEE 402
+M RDLVS+N ++SG+ E+ + ++ E + +T+ +++ + +G +E
Sbjct: 450 EMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDE 509
Query: 403 SLKLFNQMK 411
+LF +K
Sbjct: 510 GQRLFESIK 518
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 46/204 (22%)
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRK--MHSMGIQMDEYTYTSLISASFNTGLFNC 301
THP + M+ Y + G++ + F + K + I+ + Y+ ++ ++ + +
Sbjct: 48 THPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESML-- 105
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
A+VL++ +H+ V N ++ Y K G + AR++FD+MP R + WN ++S
Sbjct: 106 ---FLAHVLKSGYD-RDHY---VRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMIS 158
Query: 362 GYINARRLEE-----------------------------------AKFIFREVPERNLLT 386
GY EE A+ F ++PER++++
Sbjct: 159 GYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS 218
Query: 387 WTVMISGLAESGFGEESLKLFNQM 410
W M+SG A+ G EE+++LFN M
Sbjct: 219 WNAMLSGYAQGGAPEETIRLFNDM 242
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 180/390 (46%), Gaps = 60/390 (15%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRT--TLLSAYSAAGNVK 88
++ GF L+ +I + D+ + H F D ++ +L+ Y G +
Sbjct: 138 LVLDGFTLSGVISASVEDV-----GLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLN 192
Query: 89 LAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA 148
A ++F RD +S+NAM+ A + +G A++LF M+R G D F+ ++VL A
Sbjct: 193 EAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTA 252
Query: 149 MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFD 208
+ + + Q H ++K G V + L+ Y CA P M K+F+
Sbjct: 253 FTCLKDLAGG-MQFHGKMIKSGFHRNSHVGSGLIDLYSKCA-------PHGMLECMKVFE 304
Query: 209 EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH-GLYEEA 267
E P P V WN MISG+ +H L E+A
Sbjct: 305 EIP---------------------------------KPDLVLWNTMISGFSQHEDLCEDA 331
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
+FR+M +G D+ ++ +ISA N + G+Q+HA +++ + + +SVNNA
Sbjct: 332 LSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNR---VSVNNA 388
Query: 328 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY------INARRLEEAKFIFREVPE 381
+ Y+KCG L AR +FD MP ++ VS N++++GY I + +L E + VP
Sbjct: 389 FVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVP- 447
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
N +T+ ++S A +G +E K FN MK
Sbjct: 448 -NNITFISVLSACAHTGKVDEGEKYFNMMK 476
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 52/359 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HA + + + + N +Y K A F T P++FS T++ A +
Sbjct: 29 GKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFTGYPNVFSYNTIIHACAK 88
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
LA +LF+ P D +SYN ++ ++ + AV +F ++ G D F+ S
Sbjct: 89 HNLPNLAHQLFDEIPEP--DVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLS 146
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
G +S E+ +QLHC + G C SV N +L+CY + A
Sbjct: 147 ---GVISASVEDVGLVRQLHCFALLCGYDCYASVCNAVLACY---------GRLGRLNEA 194
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
++F E +D SW MI ++ + A A +L
Sbjct: 195 WRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRL------------------------ 230
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
F +M MG+++D +T S+++A G Q H ++++ + H
Sbjct: 231 -------FGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSH---- 279
Query: 324 VNNALITFYTKCG--KLVQAREVFDKMPVRDLVSWNAILSGYINARRL-EEAKFIFREV 379
V + LI Y+KC +++ +VF+++P DLV WN ++SG+ L E+A FRE+
Sbjct: 280 VGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREM 338
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
S+ T+I +++ A +L D + P V++N +I+ + R G +A F+++ +G
Sbjct: 78 SYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVG 137
Query: 279 IQMDEYTYTSLISASF-NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
+ +D +T + +ISAS + GL RQLH + L SV NA++ Y + G+
Sbjct: 138 LVLDGFTLSGVISASVEDVGLV---RQLHCFALLC----GYDCYASVCNAVLACYGRLGR 190
Query: 338 LVQAREVFDKM--PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
L +A VF +M RD+VSWNA++ R +A +F E+ L
Sbjct: 191 LNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGL 239
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 129/340 (37%), Gaps = 86/340 (25%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIY--CKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
H ++ +GF + + LID+Y C + +F++ P PD+
Sbjct: 266 HGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDL-------------- 311
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFVRMKRDGFAPDPFSFST 144
+ +N M+ +S + D A+ F M+R GF PD SF
Sbjct: 312 -------------------VLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVC 352
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
V+ A S ++ +Q+H +K + C +N
Sbjct: 353 VISACSNLSSPSVG-KQVHALAIKSDIPCNRVSVNN------------------------ 387
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
+A Y + +L AR++ D M V+ N+MI+GY +HG
Sbjct: 388 -----------------AFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAE 430
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQP-SEHFIL 322
E+ F M I + T+ S++SA +TG + G + + ++P +EH+
Sbjct: 431 IESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHY-- 488
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ +I + GKL +A + + MP + W A+L
Sbjct: 489 ---SCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLG 525
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 177/354 (50%), Gaps = 31/354 (8%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
F L++ YS ++ A K+F TP + +N++++A + + AVK++ +M
Sbjct: 59 FLSARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMM 118
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
+ GF PD F+ ++ + S I C+ +HC V++ G V+N L+ Y
Sbjct: 119 KFGFLPDGFTLPLIIKSCSKIGSVGL-CKIVHCHVLETGFKNHVHVVNELVGMY------ 171
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA-----RKLLDGMTHP 246
M A K+FD + + SW T+++GY N D A R L+G+ P
Sbjct: 172 ---GKVRRMEDACKVFD--GMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGL-EP 225
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V W +++S + R GL++E + F+ M GI++ ++S + G+++H
Sbjct: 226 NYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIH 285
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGK-LVQAREVFDKMPVRDLVSWNAILSGYIN 365
+V++ + L V NALI Y K + L A ++F + + LVSWNA++S Y +
Sbjct: 286 GFVIKGGYED----YLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYAD 341
Query: 366 ARRLEEAKFIFREV-------PER-NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ ++A +F ++ P R N+++W+ +ISG A G E+SL+LF QM+
Sbjct: 342 SGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQ 395
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 181/434 (41%), Gaps = 93/434 (21%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H H+L TGF+ + N L+ +Y K + A +FD
Sbjct: 144 LCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFD------------------ 185
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+ +R +S+N +V Y+ N D A ++F RM+ +G P+ ++
Sbjct: 186 ---------------GMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTW 230
Query: 143 STVLGA--------------------------------MSLIAEEE--WHCQQLHCDVVK 168
+++L + +S+ A+ + +++H V+K
Sbjct: 231 TSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIK 290
Query: 169 WGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 228
G V N L+ Y + + A K+F + + K SW +I+ Y
Sbjct: 291 GGYEDYLFVKNALIGIY--------GKKREDLGDAHKIFSD--IKNKSLVSWNALISSYA 340
Query: 229 R----NDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+D KL H P ++W+A+ISG+ G E++ + FR+M +
Sbjct: 341 DSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVM 400
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ T +S++S N GR+LHAY +R ++ + + V N L+ Y KCG +
Sbjct: 401 ANCVTISSVLSVCAELAALNLGRELHAYAIRNLMDDN----ILVGNGLVNMYMKCGVFEE 456
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAE 396
A VFD + RDL+SWN+++ GY E A F E+ L +T+ ++S +
Sbjct: 457 AHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSH 516
Query: 397 SGFGEESLKLFNQM 410
+G LF++M
Sbjct: 517 AGLVAAGRNLFDRM 530
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 174/401 (43%), Gaps = 71/401 (17%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKS-SNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IH ++ G+ ++N LI IY K ++ AH +F N + S L+S+Y+
Sbjct: 281 GKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYA 340
Query: 83 AAGNVKLAEKLF------NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
+G A ++F N + IS++A++ ++ +++LF +M+
Sbjct: 341 DSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVM 400
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
+ + S+VL + +A ++LH ++ + V N L++ Y+ C
Sbjct: 401 ANCVTISSVLSVCAELAALNLG-RELHAYAIRNLMDDNILVGNGLVNMYMKCG------- 452
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+F+EA L + ++ DL ++WN++I
Sbjct: 453 ---------VFEEAHL-----------VFDNIKGRDL---------------ISWNSLIG 477
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQ 315
GY HGL E A TF +M + G++ D+ T+ +++SA + GL GR L V ++
Sbjct: 478 GYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIE 537
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAK 373
P+ EH+ ++ + G L +A ++ MP+ + W A+L N+ R+
Sbjct: 538 PTVEHYA-----CMVDLLGRAGLLQEAHDIVRNMPIEPNECVWGALL----NSCRMYRDT 588
Query: 374 FIFREVPERNLLTWTVMISG--------LAESGFGEESLKL 406
+ E+ R +L I+G A+SG E+S ++
Sbjct: 589 DLIEEIESR-ILALKSEITGSFMLLSNIYADSGKREDSARV 628
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 164/336 (48%), Gaps = 24/336 (7%)
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
YS+ G++ + LFN T RD ++ +++ A++ + A+ + +M P+ F
Sbjct: 66 YSSLGHLNYSVTLFNRTRN--RDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAF 123
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+FS++L ++ + +HC V+K+G+ V L+ Y
Sbjct: 124 TFSSLLNGSTIQP-----IKSIHCHVIKFGLCSDTYVATGLVDGYARGGD---------F 169
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISGYV 259
SA KLFD+ P +K S+TTM+ Y ++ L AR L DGM + V WN MI GY
Sbjct: 170 ISAEKLFDKMP--EKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYA 227
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++G E FR+M ++ + T ++S+ G GR +H+Y+ +
Sbjct: 228 QNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYI-KNGKDGVVG 286
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+ V AL+ Y KCG L AR+VFDK+ +D+V+WN+++ GY EEA +F E+
Sbjct: 287 VEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEM 346
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ +T+ +++ SG + ++FN MK
Sbjct: 347 HGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMK 382
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 151/368 (41%), Gaps = 65/368 (17%)
Query: 4 RTMANLF-LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
R N F + L + S Q + ++IH H++ G + L+D Y + + A L
Sbjct: 117 RIQPNAFTFSSLLNGSTIQPI-KSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKL 175
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FDK P + S TT+L Y+ G + A LF+ RD + +N M+ Y+ N +
Sbjct: 176 FDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGN-RDVVVWNVMIDGYAQNGFPNE 234
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWG----VMCVP 175
+ LF RM + P+ + VL G + + W +H +K G V
Sbjct: 235 CLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRW----VH-SYIKNGKDGVVGVEV 289
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
V L+ Y C S + ARK+FD+ + KD +W +MI GY N
Sbjct: 290 RVGTALVDMYCKCGS---------LEDARKVFDK--IDGKDVVAWNSMIMGYAVN----- 333
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
GL EEA F +MH G++ T+ +L++A +
Sbjct: 334 --------------------------GLSEEALKLFHEMHGEGVRPSYVTFIALLTACGH 367
Query: 296 TGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-D 352
+GL G ++ + ++P EHF ++ + G+L +A ++ M + D
Sbjct: 368 SGLVTKGWEMFNLMKNEYKMEPRVEHF-----GCMVNLLGRAGRLQEAYDLVRSMKIDPD 422
Query: 353 LVSWNAIL 360
V W +L
Sbjct: 423 PVIWGTLL 430
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 93/396 (23%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HAH++ T + + +R RLI +Y K ++ AH++FD+ P ++ S T ++SAYS
Sbjct: 59 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 118
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G A+ LF++M R G P+ F+F+
Sbjct: 119 RGYAS---------------------------------QALNLFLQMLRSGTEPNEFTFA 145
Query: 144 TVL----GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
TVL ++ I +Q+H ++K LN E V
Sbjct: 146 TVLTSCTSSLGFILG-----RQIHSLIIK---------LN--------------YEDHVF 177
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ S +++ Y ++ + AR + + + V+ A+ISGY
Sbjct: 178 VGS-------------------SLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYA 218
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
+ GL EEA + FR++ G++ + TYT +++A + G+Q+H +VLR+ + PS
Sbjct: 219 QLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEI-PS-- 275
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
F++ + N+LI Y+KCG L +R +FD M R ++SWNA+L GY E +F +
Sbjct: 276 FVV-LQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLM 334
Query: 380 PER-----NLLTWTVMISGLAESGFGEESLKLFNQM 410
E + +T ++SG + G ++ L +FN M
Sbjct: 335 REETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDM 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 35/191 (18%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T +I Y + D L A + D M V+W AMIS Y + G +A + F +M G +
Sbjct: 79 TRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTE 138
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+E+T+ +++++ ++ F GRQ+H+ +++ + +H V ++L+ Y K GK+
Sbjct: 139 PNEFTFATVLTSCTSSLGFILGRQIHSLIIK--LNYEDHVF--VGSSLLDMYAKDGKI-- 192
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
EA+ +F +PER++++ T +ISG A+ G
Sbjct: 193 -----------------------------HEARTVFECLPERDVVSCTAIISGYAQLGLD 223
Query: 401 EESLKLFNQMK 411
EE+L+LF +++
Sbjct: 224 EEALELFRRLQ 234
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 175/353 (49%), Gaps = 34/353 (9%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L+ AY V+ A ++F+ + +RD +S+ ++ Y + +F
Sbjct: 112 DVFVGNALIHAYGKCKCVEGARRVFD--DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFRE 169
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G P+P + S++L A + + + + +++H V+ G++ V + L+S Y C
Sbjct: 170 MGWSGVKPNPMTVSSILPACAELKDLK-SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCL 228
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + AR +FD P +D SW ++ Y +N + L M+
Sbjct: 229 S---------VREARMVFDLMP--HRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 277
Query: 250 A----WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-SFNTGLFNCGRQ 304
A WNA+I G + +G EEA + FRKM MG + +E T +S++ A SF+ L G++
Sbjct: 278 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENL-RMGKE 336
Query: 305 LHAYVLRTVVQPSEHFI---LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
+H YV R H+ L+ AL+ Y KCG L +R VFD M +D+V+WN ++
Sbjct: 337 IHCYVFR-------HWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMII 389
Query: 362 GYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+EA F+F ++ + N +T+T ++SG + S EE +++FN M
Sbjct: 390 ANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 442
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 161/373 (43%), Gaps = 88/373 (23%)
Query: 45 RLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDT 104
RLI + + A LFD P PD + +TL+SA +
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALT---------------------- 54
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC 164
+H L + A+K++ ++ G PD F A + ++ + +++H
Sbjct: 55 ----------THGLS-NEAIKIYSSLQERGIKPDMPVFLAAAKACA-VSGDALRVKEVHD 102
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
D + GVM V N L+ Y C + AR++FD+ L +D SWT++
Sbjct: 103 DATRCGVMSDVFVGNALIHAYGKCKC---------VEGARRVFDD--LVVRDVVSWTSLS 151
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
+ YV+ G+ R G+ D FR+M G++ +
Sbjct: 152 SCYVK--------------------------CGFPRKGM-----DVFREMGWSGVKPNPM 180
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
T +S++ A G+++H + +R VV L V +AL++ Y KC + +AR
Sbjct: 181 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVN------LFVCSALVSLYAKCLSVREAR 234
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESG 398
VFD MP RD+VSWN +L+ Y + E+ +F R+ + TW +I G E+G
Sbjct: 235 MVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG 294
Query: 399 FGEESLKLFNQMK 411
EE++++F +M+
Sbjct: 295 RSEEAVEMFRKMQ 307
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 157/367 (42%), Gaps = 61/367 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH + G + + + L+ +Y K ++ A +FD P+ D+ S +L+AY
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257
Query: 84 AGNVKLAEKLFNATPVTLRDTI-----SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
K EK F+ RD + ++NA++ N AV++F +M++ GF P+
Sbjct: 258 N---KEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPN 314
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVK-WGVMCVPSVLNTLLSCYICCASSTLVESP 197
+ S++L A S +E +++HC V + W V
Sbjct: 315 EITISSILPACSF-SENLRMGKEIHCYVFRHWKV-------------------------- 347
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
D S T ++ Y + DL +R + D M VAWN MI
Sbjct: 348 -----------------GDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIA 390
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQP 316
HG +EA F KM +Q + T+T ++S ++ L G Q+ + R +V+P
Sbjct: 391 NAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEP 450
Query: 317 -SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEEAKF 374
+ H+ + ++ Y++ G+L +A + MP+ S W A+L+ + +E AK
Sbjct: 451 DANHY-----SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKI 505
Query: 375 IFREVPE 381
+++ E
Sbjct: 506 SAKKLFE 512
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 187/394 (47%), Gaps = 58/394 (14%)
Query: 52 KSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
++ NI A LFDKT DI + ++L+AY G ++ ++ LFN+ P+ ++ +S+N+++
Sbjct: 41 RAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNSIPI--KNIVSWNSII 98
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV 171
A N + + A F M A S++ ++ + E +++ ++ + V
Sbjct: 99 TACIQNDNINDAFSYFTAMPEKNVA----SYNAMMSGFVKMGRVE-EAKKVFEEIPRPNV 153
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
+ +++ + +E + AR LFD P ++E SWT MI+G V N
Sbjct: 154 VSYTVMIDGYMK----------MEGGSGIKRARALFDAMP--SRNEVSWTVMISGLVENG 201
Query: 232 DLASARKLLDGMTHPIAVA-------------------------------WNAMISGYVR 260
A ++ M VA WN MI+G+ +
Sbjct: 202 LHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQ 261
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+G EEA + F +M G+Q D+ T+ SL +A + L + GRQ +A ++ +
Sbjct: 262 NGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSD--- 318
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
LSV+NAL+T Y+KCG++V + FD++ D+VSWN I++ + + A++ F +
Sbjct: 319 -LSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMV 377
Query: 381 ERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ +T+ ++S +G +E++ LF+ M
Sbjct: 378 TAGVTPDGITFLNLLSACCRAGKVDETVNLFDLM 411
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ +AR+LFD+ SQKD ++ +M+ Y +N L ++ L + + V+WN++I+ +
Sbjct: 45 ITAARQLFDKT--SQKDIVTYNSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACI 102
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSE 318
++ +AF F M + +Y +++S G GR A V + +P+
Sbjct: 103 QNDNINDAFSYFTAMPEKNVA----SYNAMMS-----GFVKMGRVEEAKKVFEEIPRPN- 152
Query: 319 HFILSVNNALITFYTKC---GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
++S +I Y K + +AR +FD MP R+ VSW ++SG + EEA +
Sbjct: 153 --VVSYT-VMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVMISGLVENGLHEEAWEV 209
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
F +P++N++ +T MI+G + G +E+ LF Q++
Sbjct: 210 FVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIR 245
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
Q D Y I+A G RQL + S+ I++ N +++T Y + G L
Sbjct: 26 QQDVYFANLNITALSRAGNITAARQLFD-------KTSQKDIVTYN-SMLTAYWQNGFLQ 77
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
++ +F+ +P++++VSWN+I++ I + +A F +PE+N+ ++ M+SG + G
Sbjct: 78 HSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASYNAMMSGFVKMGR 137
Query: 400 GEESLKLFNQM 410
EE+ K+F ++
Sbjct: 138 VEEAKKVFEEI 148
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 59/369 (15%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N L+ +Y ++ + A LF+ + ++ S L+ Y + A +LF+ PV R+
Sbjct: 145 NGLLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPV--RN 202
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
IS+N M+ Y+ + D A +LF RD F F+ V M A +
Sbjct: 203 AISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPG 262
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
++ N +++ Y+ M AR+LF+ P ++ SW T
Sbjct: 263 KREMA----------YNVMIAGYVQYKK---------MDMARELFEAMPC--RNVGSWNT 301
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I+GY +N D+A AR+L D MT V+W A+I+GY + G YE+ KM G ++
Sbjct: 302 IISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLN 361
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
T+ +S G+Q+H ++T V NAL+ Y KCG + +A
Sbjct: 362 RSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNG----CLVGNALLEMYCKCGSIGEAY 417
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
+VF++M ++D++SWN +L+GY A GFG +
Sbjct: 418 DVFERMQLKDIISWNTMLAGY-------------------------------ARHGFGRQ 446
Query: 403 SLKLFNQMK 411
+L +F+ MK
Sbjct: 447 ALLVFDSMK 455
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A ++FD P K+ SW M+ GYV+N L AR L D M AV+WN M+SGYVR G
Sbjct: 67 ALRVFDSMPY--KNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSG 124
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+EA F M D ++ L++ G R+L + + L
Sbjct: 125 CVDEAKLVFDNMP----YKDSISWNGLLAVYVQNGRLEEARRL--------FESKVDWEL 172
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
N L+ Y K L AR +FD MPVR+ +SWN ++SGY L +A+ +F E P R
Sbjct: 173 ISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVR 232
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ TWT M+ +SG +E+ ++F++M
Sbjct: 233 DVFTWTAMVFAYVQSGMLDEARRVFDEM 260
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 167/367 (45%), Gaps = 69/367 (18%)
Query: 47 IDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTIS 106
I + ++ + A +FD P ++FS +L+ Y + A LF+ P +D +S
Sbjct: 55 ISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQ--KDAVS 112
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
+N M+ Y + A +F M P+ D
Sbjct: 113 WNVMLSGYVRSGCVDEAKLVFDNM--------PYK-----------------------DS 141
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP--SWTTMI 224
+ W N LL+ Y+ + L E AR+LF+ S+ D SW ++
Sbjct: 142 ISW---------NGLLAVYV--QNGRLEE-------ARRLFE----SKVDWELISWNCLM 179
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
GYV+ L AR+L D M A++WN MISGY R G +A R++ D +
Sbjct: 180 GGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQA----RRLFEESPVRDVF 235
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+T+++ A +G+ + R++ + P + + N +I Y + K+ ARE+
Sbjct: 236 TWTAMVFAYVQSGMLDEARRVFDEM------PGKREM--AYNVMIAGYVQYKKMDMAREL 287
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
F+ MP R++ SWN I+SGY + +A+ +F + +R+ ++W +I+G A++G E+ +
Sbjct: 288 FEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVM 347
Query: 405 KLFNQMK 411
+ +MK
Sbjct: 348 HMLVKMK 354
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 136/325 (41%), Gaps = 61/325 (18%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y + + A LF+ P ++ S T++S Y G++ A +LF+ +T RD
Sbjct: 269 NVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDM--MTQRD 326
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF----STVLGAMSLIAEEEWHC 159
+S+ A++ Y+ + + V+MKRDG + + +F ST G +L+
Sbjct: 327 CVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLG----- 381
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+Q+H VK G V N LL Y C S + A +F+ L KD
Sbjct: 382 KQVHGQAVKTGYDNGCLVGNALLEMYCKCGS---------IGEAYDVFERMQL--KD--- 427
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
++WN M++GY RHG +A F M + G
Sbjct: 428 ----------------------------IISWNTMLAGYARHGFGRQALLVFDSMKTAGF 459
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGK 337
+ DE T ++ A +TGL + G + + + + S+H+ N +I + G
Sbjct: 460 KPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHY-----NCMIDLLGRAGL 514
Query: 338 LVQAREVFDKMPVR-DLVSWNAILS 361
L +A + MP D +W A+L
Sbjct: 515 LEEAHNLMRNMPFEPDAATWGALLG 539
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ LH + V + + +I+ N++ T + + G A VFD MP ++L SWN +L+
Sbjct: 30 GKHLHNFCF-PVQKARDTYIVKCTNSIST-HMRNGHCHLALRVFDSMPYKNLFSWNLMLT 87
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
GY+ RRL +A+ +F +P+++ ++W VM+SG SG +E+ +F+ M
Sbjct: 88 GYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNM 136
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
A L + +H + TG+ L+ N L+++YCK +I A+ +F++ DI S T+L
Sbjct: 376 AALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTML 435
Query: 79 SAYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GF 135
+ Y+ G + A +F++ T D I+ ++ A SH + F M +D G
Sbjct: 436 AGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGI 495
Query: 136 APDPFSFST---VLGAMSLIAE 154
P+ ++ +LG L+ E
Sbjct: 496 TPNSKHYNCMIDLLGRAGLLEE 517
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 171/359 (47%), Gaps = 33/359 (9%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+F + D + + + Y+ G + KLF+ ++ RD++S+N M+
Sbjct: 129 VFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFD--EISERDSVSWNVMISGCVKCRRFE 186
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE--WHCQQLHCDVVKWGVMCVPSVLN 179
AV++F RM+ D + + S +TV+ +++ A +++H +++ + + N
Sbjct: 187 EAVEVFQRMRVD--SNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGN 244
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
LL Y C ++ AR++FD + +K+ WT+M+ GYV +L AR L
Sbjct: 245 ALLDMYCKCG---------YVSVAREIFD--GMIEKNVNCWTSMVTGYVSCGELDKARDL 293
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D V W AMI+GYV+ ++EA F +M G++ D++ +L++ G
Sbjct: 294 FDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTL 353
Query: 300 NCGRQLHAYVL--RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
GR +H YV R VV V +LI Y KCG + ++ EVF+ + +D SW
Sbjct: 354 EHGRWIHDYVRENRIVVDA------VVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWT 407
Query: 358 AILSGY------INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+I+ G I A L E IF P+ +T+ V+++ + G EE KLF+ M
Sbjct: 408 SIICGLAMNGKTIEALELFEEMKIFGAKPDD--VTFIVLLNACSHGGLVEEGHKLFHSM 464
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 84/391 (21%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH---LFDKTPNPDIFSRTTLLSAY 81
+ IH+ I TTG N+L + +N Y H+ +F+ T +P +F
Sbjct: 19 QQIHSLIFTTGLHQDTHTLNKLFSVSIHLNNNNYFHYSLSIFNHTLHPSLFL-------- 70
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
YN ++K++ + LF +++ +G PD ++
Sbjct: 71 -------------------------YNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYT 105
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+ VL A++ IA+ ++H V K G+ V N+ + Y V
Sbjct: 106 YPFVLKAVAFIADFR-QGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFV------- 157
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
RKLFDE +S++D +V+WN MISG V+
Sbjct: 158 --RKLFDE--ISERD-------------------------------SVSWNVMISGCVKC 182
Query: 262 GLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+EEA + F++M ++ E T S ++A + G+++H ++ ++ F
Sbjct: 183 RRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFI----IEKELDF 238
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+ + NAL+ Y KCG + ARE+FD M +++ W ++++GY++ L++A+ +F + P
Sbjct: 239 TMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSP 298
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
R+++ WT MI+G + +E++ LF +M+
Sbjct: 299 TRDVVLWTAMINGYVQFNRFDEAVALFEEMQ 329
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 149/349 (42%), Gaps = 54/349 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ + IH I+ T + N L+D+YCK + A +FD ++ T++++ Y
Sbjct: 223 VGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYV 282
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+ G + A LF+ +P RD + + AM+ Y AV LF M+ G PD F
Sbjct: 283 SCGELDKARDLFDKSPT--RDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIV 340
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYICCASSTLVESPVLMA 201
+L + + E H + +H D V+ + V +V+ T L+ Y C VE +
Sbjct: 341 VALLTCCAQLGTLE-HGRWIH-DYVRENRIVVDAVVGTSLIEMYAKCGC---VEKSL--- 392
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
++F+ L +KD SWT++I G N
Sbjct: 393 ---EVFN--GLKEKDTASWTSIICGLAMN------------------------------- 416
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPS-EH 319
G EA + F +M G + D+ T+ L++A + GL G +L H+ ++P+ EH
Sbjct: 417 GKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEH 476
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+ I + G L +A E+ K+P + + AI +++A R
Sbjct: 477 Y-----GCFIDLLGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACR 520
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 181/422 (42%), Gaps = 77/422 (18%)
Query: 25 RAIHAHILTTGFR--------LTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
+ IHA ++ GF L I L+ + YAH LF + P PD F
Sbjct: 19 KQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFM--- 75
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
YN M++ S + + A+ L+ M R
Sbjct: 76 ------------------------------YNVMIRGSSQSPNPLRAISLYTEMHRHFVK 105
Query: 137 PDPFSFSTVLGAMSLIAEEEW--HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
D ++F VL A + + W +H V++ G V NTLL + C +
Sbjct: 106 GDSYTFPFVLKACTRLF---WVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVA 162
Query: 195 ES-------------PVLMAS---------ARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
S L+A ARKLF+E P ++D SW MI GYV+ +
Sbjct: 163 TSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMP--ERDLVSWNVMITGYVKQGE 220
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+ SAR L D V+WNAMI+GYV GL ++A + F +M G+ DE T SL+SA
Sbjct: 221 MESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSA 280
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
+ G G+++HA V+ + + NALI Y KCG + ++ +VF + +D
Sbjct: 281 CADLGDLENGKKVHAKVMEISMGKLSTLL---GNALIDMYAKCGNIKESLDVFWSITDKD 337
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFN 408
++SWN+++ G +E+ +F+ + N +T+ ++ + +G +E K F+
Sbjct: 338 VISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFD 397
Query: 409 QM 410
M
Sbjct: 398 LM 399
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 149/340 (43%), Gaps = 23/340 (6%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
A+H +L GF ++RN L+ + K ++ A LFD + D+ + ++L++ Y+ G
Sbjct: 129 AVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRG 188
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
++K+A KLFN P RD +S+N M+ Y + +A LF + D S++ +
Sbjct: 189 DLKVARKLFNEMPE--RDLVSWNVMITGYVKQGEMESARMLF----DEAPVKDVVSWNAM 242
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
+ + + +L ++ + GV P + TLLS CA +E+
Sbjct: 243 IAGYVVCGLSK-QALELFNEMCRAGVF--PDEV-TLLSLLSACADLGDLENG---KKVHA 295
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE 265
E + + +I Y + ++ + + +T ++WN++I G HG +
Sbjct: 296 KVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGK 355
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI---L 322
E+ F+ M I +E T+ ++ A + G + G + + SE+ I +
Sbjct: 356 ESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFD------LMSSEYKIEPNI 409
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++ + G L +A + D M + + + W +L+
Sbjct: 410 RHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLA 449
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 176/410 (42%), Gaps = 118/410 (28%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D+ + L L H + + + +H HI + G+R + N L+++Y K + + A
Sbjct: 83 DAIAYSELIKCCLAHKAVRE--GKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQM 140
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+FDK P ++ S TT++SAYS A KL ++
Sbjct: 141 VFDKMPERNVVSWTTMISAYSYA---KLNDR----------------------------- 168
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+KL V M RDG P+ ++FS+VL A + + +Q+H ++K G
Sbjct: 169 -AMKLLVFMIRDGVMPNMYTFSSVLRACERLCD----LKQVHSGILKAG----------- 212
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ES V + SA +I Y + +L A +
Sbjct: 213 ------------LESDVFVRSA-------------------LIDAYSKLGELLEAVGVFR 241
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M +V WN++I+ + +H +EA ++ M G D+ T TS++ A + L
Sbjct: 242 EMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLEL 301
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
GRQ+H +VL+ + IL NNAL+ Y KCG L A+ +F +M V+D++SW
Sbjct: 302 GRQVHVHVLKF----DQDLIL--NNALLDMYCKCGSLEDAKFIFSRMAVKDVISW----- 350
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ MISGLA++GF E+L LF+ MK
Sbjct: 351 --------------------------STMISGLAQNGFSVEALNLFDSMK 374
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F R+ L+ AYS G + A +F + D++ +N+++ A++ + DG A+ L+
Sbjct: 216 DVFVRSALIDAYSKLGELLEAVGVFR--EMVTGDSVVWNSIIAAFAQHSDGDEALALYKS 273
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+R+GF D + ++VL A + + E +Q+H V+K+ + + N LL Y C
Sbjct: 274 MRREGFPADQSTLTSVLRACTGSSLLELG-RQVHVHVLKFDQDLILN--NALLDMYCKCG 330
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----H 245
S + A+ +F + ++ KD SW+TMI+G +N A L D M
Sbjct: 331 S---------LEDAKFIF--SRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPR 379
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLIS 291
P + ++ GL E + FR M ++ GI Y+ L+
Sbjct: 380 PNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLD 426
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A M G+ D Y+ LI G+++H ++ +P I N
Sbjct: 68 AMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLI----N 123
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY----INARRLEEAKFIFREVPER 382
L+ Y K L +A+ VFDKMP R++VSW ++S Y +N R ++ F+ R+
Sbjct: 124 TLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMP 183
Query: 383 NLLTWTVMI 391
N+ T++ ++
Sbjct: 184 NMYTFSSVL 192
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 184/412 (44%), Gaps = 54/412 (13%)
Query: 4 RTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF 63
R + L A L H L + +HAH + F +I NRLI +Y K ++ A LF
Sbjct: 64 RLYSTLIAACLRHRKLE--LGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLF 121
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAA 123
D+ P D+ S T++S Y+ G ++ A KLF+ P RD S+NA++ Y A
Sbjct: 122 DEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMP--HRDNFSWNAVISGYVSQGWYMEA 179
Query: 124 VKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
+ LF M+ + + + A + +++H +++ G+ V LL
Sbjct: 180 LDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLD 239
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y C S + AR +FD+ ++ KD SWTTMI R DG
Sbjct: 240 LYGKCGS---------LNEARGIFDQ--MADKDIVSWTTMI-----------HRCFEDGR 277
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
+E F FR + G++ +EYT+ +++A + G+
Sbjct: 278 K--------------------KEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGK 317
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++H Y+ R P F + +AL+ Y+KCG AR VF++MP DLVSW +++ GY
Sbjct: 318 EVHGYMTRVGYDP---FSFAA-SALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGY 373
Query: 364 INARRLEEA----KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ + A + + R + + +T+ ++S +G + L+ F+ +K
Sbjct: 374 AQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMD---------EYTYTSLISASFNTGLFNCG 302
+ +S + H +EE + F + + + +D Y++LI+A G
Sbjct: 23 DTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELG 82
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+++HA+ + P + ++N LI Y KCG LV A+ +FD++P +DL SWN ++SG
Sbjct: 83 KRVHAHTKASNFIPG----IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISG 138
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y N R+E+A+ +F E+P R+ +W +ISG G+ E+L LF M+
Sbjct: 139 YANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQ 187
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 165/336 (49%), Gaps = 51/336 (15%)
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
SA S +G++ + ++F + ++ S+N +++ YS++ + ++ +F++M R G AP
Sbjct: 55 FSALSNSGDIDYSYRVF--SQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAP 112
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D ++ ++ A + +++++ +H ++K G + N+L+ Y C +
Sbjct: 113 DYLTYPFLVKASARLSKQKSGVS-VHAQIIKTGHESDRFIQNSLIHMYASCGN------- 164
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
+ A K+F+ + K+ SW +M+ GY + ++A A+K+ + M +W++ I G
Sbjct: 165 --IMWAHKVFES--MQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDG 220
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
YV+ G Y EA F KM ++G + +E T S++SA + G GR +H Y++ ++
Sbjct: 221 YVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLP-- 278
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ + +L+ Y KCG + EEA F+FR
Sbjct: 279 --MTMVLQTSLVDMYAKCGAI-------------------------------EEALFVFR 305
Query: 378 EVP--ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ + ++ W MI GLA G EESLKLF +M+
Sbjct: 306 GISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQ 341
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 172/364 (47%), Gaps = 55/364 (15%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVK 112
S +I Y++ +F + +P IF S+N +++
Sbjct: 61 SGDIDYSYRVFSQISSPTIF---------------------------------SWNIIIR 87
Query: 113 AYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVM 172
YS++ + ++ +F++M R G APD ++ ++ A + +++++ +H ++K G
Sbjct: 88 GYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGV-SVHAQIIKTGHE 146
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
+ N+L+ Y C + + A K+F+ + K+ SW +M+ GY + +
Sbjct: 147 SDRFIQNSLIHMYASCGN---------IMWAHKVFE--SMQGKNLVSWNSMLDGYAKCGE 195
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+A A+K+ + M +W++ I GYV+ G Y EA F KM ++G + +E T S++SA
Sbjct: 196 MAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSA 255
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR- 351
+ G GR +H Y++ ++ + + +L+ Y KCG + +A VF +
Sbjct: 256 CAHLGALQKGRMMHQYIIDNLLP----MTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQ 311
Query: 352 -DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKL 406
D+ WNA++ G +EE+ +F+E+ + +T+ +++ A G +E+
Sbjct: 312 TDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNF 371
Query: 407 FNQM 410
F +
Sbjct: 372 FESL 375
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 54/376 (14%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
FL + + + Q ++HA I+ TG I+N LI +Y NI +AH +F+
Sbjct: 119 FLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGK 178
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ S ++L Y+ G + +A+K+F + + RD S+++ + Y + A+ +F +
Sbjct: 179 NLVSWNSMLDGYAKCGEMAMAQKVFES--MQERDVRSWSSFIDGYVKAGEYREAMAVFEK 236
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G + + +VL A + H ++ G M +++ LL
Sbjct: 237 MRAVGPKANEVTMVSVLSACA------------HLGALQKGRMMHQYIIDNLL------- 277
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM--THPI 247
P+ M T+++ Y + + A + G+ +
Sbjct: 278 -------PMTMVLQ-----------------TSLVDMYAKCGAIEEALFVFRGISKSQTD 313
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LH 306
WNAMI G HGL EE+ F++M GI+ DE TY L++A + GL
Sbjct: 314 VFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFE 373
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW-NAILSGYIN 365
+ V R + SEH+ ++ + G+L A + ++P+ S AI SG IN
Sbjct: 374 SLVKRGMTPTSEHYA-----CMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCIN 428
Query: 366 ARRLEEAKFIFREVPE 381
R + A+ + R++ E
Sbjct: 429 HRNFDLAETVGRKLIE 444
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 178/410 (43%), Gaps = 63/410 (15%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPD 70
+ L H + TQT IHAH L G + I + + + IPYA +F+ T +P+
Sbjct: 12 ILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPN 71
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
I + +N+++KA+S H + F M
Sbjct: 72 I---------------------------------LLFNSIIKAHSSFPPFHQSFHFFNLM 98
Query: 131 K-RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
K PD F+F +L A S + + + Q LH V G V LL Y C
Sbjct: 99 KMTHNILPDNFTFPPLLKATSYLRDYDL-GQCLHAHVTALGFYRHSPVEIGLLEVYSNCG 157
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
M A K+FDE + ++ W MI G+ + DL KL M V
Sbjct: 158 K---------MEDANKVFDE--MLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVV 206
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY- 308
+WN MIS + EAF FR+M G + D+ T +++ G + G +H+Y
Sbjct: 207 SWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYA 266
Query: 309 ----VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+LR V+ SV N+L+ FY KCG L A +VF++M +++VSWNA++SG
Sbjct: 267 DGKGLLRKVI--------SVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLG 318
Query: 365 NARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
+ E +F ++ + + T+ +++ A +GF ++ ++F+ M
Sbjct: 319 LNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSM 368
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ HA+++TT P+I N+ + +S + YAH LFD+ P PD+F
Sbjct: 29 KQTHANLITTAQITLPVIANKFLKNVALAS-LTYAHKLFDQIPQPDLFI----------- 76
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA---AVKLFVRMKRD-GFAPDPF 140
YN M+K SH++ H+ ++ +F + RD G+ P+ +
Sbjct: 77 ----------------------YNTMIK--SHSMSPHSYLDSIAVFRSLIRDSGYFPNRY 112
Query: 141 SFSTVLGAMS---LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
SF GA + E E Q+ VK G+ V+N L+ + VE
Sbjct: 113 SFVFAFGACGNGMCVREGE----QVFTHAVKVGLDGNVFVVNALIGMF---GKWGRVED- 164
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
AR +FD A +D SW TMI YV + ++ A++L D M V+W+ +I+G
Sbjct: 165 -----ARNVFDSAV--DRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAG 217
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
YV+ G + EA D F KM ++ +EYT S ++A N + G+ +H Y+ R ++ +
Sbjct: 218 YVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMN 277
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIF 376
+ + S LI Y KCG++ A VF + V R + WNA++ G+ + EEA +F
Sbjct: 278 DRLLAS----LIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVF 333
Query: 377 REV 379
++
Sbjct: 334 EKM 336
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 151/362 (41%), Gaps = 54/362 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ H + G + N LI ++ K + A ++FD + D +S T++ AY
Sbjct: 130 GEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVG 189
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+GN+ LA++LF+ + RD +S++ ++ Y A+ F +M + P+ ++
Sbjct: 190 SGNMVLAKELFD--EMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMV 247
Query: 144 TVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ L A S L+A ++ + +H + + + +L +L+ Y C + S
Sbjct: 248 SALAACSNLVALDQ--GKWIHVYIRRDNIKMNDRLLASLIDMYAKCGE---------IDS 296
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A +F E + +K P WNAMI G+ HG
Sbjct: 297 ASSVFHEHKVKRKVWP--------------------------------WNAMIGGFAMHG 324
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHF 320
EEA + F KM + ++ T+ +L++A + + G+ + + P EH+
Sbjct: 325 KPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHY 384
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREV 379
++ ++ G L + E+ MP+ D+ W A+L+ + +E I R +
Sbjct: 385 -----GCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRII 439
Query: 380 PE 381
E
Sbjct: 440 KE 441
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 175/377 (46%), Gaps = 26/377 (6%)
Query: 40 PLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
PL+ Y + H+ DIF ++ + G + +A +FN + V
Sbjct: 162 PLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRV 221
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
RD +++N+M+ A+K++ M+ + P+ + ++ + S + +
Sbjct: 222 --RDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG- 278
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
++ HC + + G+ + N L+ Y+ C + +AR LFD ++QK S
Sbjct: 279 KEFHCYIKEHGLEFTIPLTNALMDMYVKCGE---------LLTARVLFDN--MAQKTLVS 327
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
WTTM+ GY R L AR++L + V WNA+ISG V+ +EA F +M I
Sbjct: 328 WTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTI 387
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ D+ T + +SA G + G +H Y+ R + +++ AL+ Y KCG +
Sbjct: 388 EPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSID----VALGTALVDMYAKCGNIA 443
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE------VPERNLLTWTVMISG 393
+A +VF+++P R+ ++W A++ G ++A F + VP+ +T+ ++S
Sbjct: 444 RALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDE--ITFLGVLSA 501
Query: 394 LAESGFGEESLKLFNQM 410
G EE K F++M
Sbjct: 502 CCHGGLVEEGRKYFSEM 518
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 97/163 (59%), Gaps = 4/163 (2%)
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V WN+MI+G V+ GL EA +++M + ++ +E T +IS+ N G++ H Y
Sbjct: 225 VTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCY 284
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+ ++ F + + NAL+ Y KCG+L+ AR +FD M + LVSW ++ GY
Sbjct: 285 IKEHGLE----FTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGF 340
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
L+ A+ I ++PE++++ W +ISG ++ G+E+L LF++M+
Sbjct: 341 LDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQ 383
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 153/388 (39%), Gaps = 58/388 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + H +I G T + N L+D+Y K + A LFD + S TT++ Y+
Sbjct: 277 LGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYA 336
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G + +A ++ P + + +NA++ G A+ LF M+ PD +
Sbjct: 337 RFGFLDVAREILYKIPE--KSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTM 394
Query: 143 STVLGAMSLIAEEEWHCQQLHC-DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
L A C QL DV W + YI
Sbjct: 395 VNCLSA----------CSQLGALDVGIW------------IHHYI--------------- 417
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
KL + L T ++ Y + ++A A ++ + + + W A+I G H
Sbjct: 418 ERHKLSIDVALG-------TALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALH 470
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EH 319
G ++A F KM +GI DE T+ ++SA + GL GR+ + + V P +H
Sbjct: 471 GNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKH 530
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSG---YINARRLEEAKFI 375
+ + ++ + G L +A E+ MP+ D A+ Y N + E F
Sbjct: 531 Y-----SCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFK 585
Query: 376 FREVPERNLLTWTVMISGLAESGFGEES 403
E+ ++ + ++ S +E+ +E+
Sbjct: 586 LLEIDPQDSGNYVLLASMYSEAKMWKEA 613
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQ---L 305
+WNA I GYV G E F +++M G ++ D +TY L+ CG+ L
Sbjct: 124 SWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGC-------CGQYSSCL 176
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
VL V++ + V+NA IT CG+L A +VF+K VRDLV+WN++++G +
Sbjct: 177 GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVK 236
Query: 366 ARRLEEAKFIFREVPER----NLLTWTVMISGLAE 396
EA I++E+ N +T MIS ++
Sbjct: 237 RGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQ 271
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 172/375 (45%), Gaps = 59/375 (15%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ +Y+A G L K+F+ ++ R+ + YN M+++Y +N + +F M GF
Sbjct: 59 LMRSYAACGEPGLTRKVFD--EMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFR 116
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD +++ VL A S +E + +H DV+K G+ V N L++ Y C
Sbjct: 117 PDNYTYPCVLKACS-CSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGC------ 169
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRN----DDLASARKLLDGMTHPIA---- 248
+ AR++FDE + KD SW +M+AGY N D L R++ D P
Sbjct: 170 ---LFEARRVFDE--MIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMA 224
Query: 249 -----------------------------VAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
++WN MI Y+++ L +A D + +M +
Sbjct: 225 SLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRV 284
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ D T+ S++ A + GR++H YV + + P+ L + N+LI Y +CG L
Sbjct: 285 EPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPN----LLLENSLIDMYARCGCLD 340
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLA 395
A+ VFD+M RD+ SW +++S Y + A +F E+ + + + ++S +
Sbjct: 341 DAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACS 400
Query: 396 ESGFGEESLKLFNQM 410
SG +E F QM
Sbjct: 401 HSGLLDEGRIYFKQM 415
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 41/212 (19%)
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
RK+ D M+ V +N MI YV + Y++ FR+M + G + D YTY ++ A +
Sbjct: 73 RKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS 132
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G +H VL+ + F L V N LI Y KCG L +AR VFD+M +D+VSW
Sbjct: 133 ENLRYGLLIHGDVLKVGLD----FNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSW 188
Query: 357 NAILSGYINARRLEEAKFIFREVPE----------------------------------- 381
N++++GY + R ++A I RE+ +
Sbjct: 189 NSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNL 248
Query: 382 --RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+NL++W VMI ++ +++ L+ QM+
Sbjct: 249 ERKNLISWNVMIRVYMKNSLPTQAVDLYLQME 280
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 77/343 (22%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY----- 81
IH +L G + N LI +Y K + A +FD+ D+ S ++++ Y
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMR 200
Query: 82 --------------------------------SAAGNVKLAEKLFNATPVTLRDTISYNA 109
+++ NV EK+F + ++ IS+N
Sbjct: 201 FDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIF--VNLERKNLISWNV 258
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM----SLIAEEEWHCQQLHCD 165
M++ Y N AV L+++M++ PD +F++VL A +L+ H +
Sbjct: 259 MIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIH------E 312
Query: 166 VVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
V+ +C P++L N+L+ Y C + A+++FD +D SWT++
Sbjct: 313 YVEKKKLC-PNLLLENSLIDMYARCGC---------LDDAKRVFDRMKF--RDVASWTSL 360
Query: 224 IAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
I+ Y +A L M + P ++A+ A++S GL +E F++M
Sbjct: 361 ISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQM----- 415
Query: 280 QMDEYTYTSLIS--ASFNTGLFNCGRQLHAY--VLRTVVQPSE 318
D+Y T I A L GR AY + + ++P+E
Sbjct: 416 -TDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNE 457
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 169/347 (48%), Gaps = 35/347 (10%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
LLS Y+A+G ++ A KLF + T +N M++AY+ ++ +V+ + +M +
Sbjct: 54 LLSFYAASGKLQHAHKLF--IQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACE 111
Query: 137 PDPFSFSTVLGAM---SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYICCASST 192
PD F++S +L A L+ E E QLH V+ G C +NT L++ Y C
Sbjct: 112 PDGFTYSFLLSACVRGGLVREGE----QLHGIVLAKG-YCSDVFVNTNLINFYADCGG-- 164
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ AR +FD+ ++Q+ SW +++ GYV+ D +AR + + + V+W
Sbjct: 165 -------VEQARYVFDD--MTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWT 215
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
MI+GY ++G EA F +M +++D+ +++SA G GR +H YV
Sbjct: 216 TMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQER 275
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
Q S + +NNAL+ Y CG + +A +F KM + VSW I+ + +EA
Sbjct: 276 QRQAS----VRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEA 331
Query: 373 KFIFREVPERNL---------LTWTVMISGLAESGFGEESLKLFNQM 410
+F+++ + T+ + + +GF EE ++F M
Sbjct: 332 LDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESM 378
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+++ Y + L A KL + +P WN MI Y ++ + +M + D
Sbjct: 54 LLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPD 113
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+TY+ L+SA GL G QLH VL S+ F VN LI FY CG + QAR
Sbjct: 114 GFTYSFLLSACVRGGLVREGEQLHGIVLAKGY-CSDVF---VNTNLINFYADCGGVEQAR 169
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
VFD M R +VSWN++L GY+ + A+ +F E+P RN+++WT MI+G A++G E
Sbjct: 170 YVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVE 229
Query: 403 SLKLFNQMK 411
+L LF QM+
Sbjct: 230 ALSLFGQMR 238
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 174/364 (47%), Gaps = 67/364 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
HL + D+ + ++L Y+ G++++A ++F+ + ++D +++ +M+ YS DG
Sbjct: 116 HLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFD--EMCVKDVVTWTSMITGYSQ--DG 171
Query: 121 HA-----AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC---QQLHCDVVKWGVM 172
+A A+ LF+ M RDG P+ F+ S+++ + C +Q+H K+G
Sbjct: 172 YASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGS----CVDGKQIHGCCWKYGFQ 227
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
V ++L+ Y C + +R +FDE L K+E
Sbjct: 228 ENVFVGSSLVDMYARCGE---------LRESRLVFDE--LESKNE--------------- 261
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
V+WNA+ISG+ R G EEA F KM G E+TY++L+ +
Sbjct: 262 ----------------VSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
S TG G+ LHA+++++ + + V N L+ Y K G + A++VFD++ D
Sbjct: 306 SSTTGSLEQGKWLHAHMMKS----GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVD 361
Query: 353 LVSWNAILSGYINARRLEEAKFIFREV-----PERNLLTWTVMISGLAESGFGEESLKLF 407
+VS N++L GY +EA +F E+ E N +T+ +++ + +G +E L F
Sbjct: 362 VVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYF 421
Query: 408 NQMK 411
MK
Sbjct: 422 ELMK 425
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 144/314 (45%), Gaps = 51/314 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F ++L+ Y+ G ++ + +F+ + ++ +S+NA++ ++ +G A+ LFV+
Sbjct: 229 NVFVGSSLVDMYARCGELRESRLVFD--ELESKNEVSWNALISGFARKGEGEEALGLFVK 286
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+R+GF F++S +L + S E + LH ++K G V V NTLL Y
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLE-QGKWLHAHMMKSGKKLVGYVGNTLLHMY---- 341
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ ++ A+K+ D + V
Sbjct: 342 --------------------------------------AKSGNICDAKKVFDRLVKVDVV 363
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+ N+M+ GY +HGL +EA + F +M + I+ ++ T+ S+++A + GL + G
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFEL 423
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINAR 367
+ + ++P LS ++ + + G L QA+ ++MP+ + W A+L +
Sbjct: 424 MKKYGLEPK----LSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHK 479
Query: 368 RLEEAKFIFREVPE 381
E + ++V E
Sbjct: 480 NTEMGAYAAQKVLE 493
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 10 FLAQLNHPSATQTLARA--IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
+ A L S T +L + +HAH++ +G +L + N L+ +Y KS NI A +FD+
Sbjct: 299 YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV 358
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR---DTISYNAMVKAYSHNLDGHAAV 124
D+ S ++L Y+ G K A +LF + + + I++ +++ A SH +
Sbjct: 359 KVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGL 418
Query: 125 KLFVRMKRDGFAPDPFSFSTVL 146
F MK+ G P ++TV+
Sbjct: 419 YYFELMKKYGLEPKLSHYTTVV 440
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
++ D Y L+ G G+ +H +++ + + L + N+++ Y KCG L
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRND----LVIKNSILFMYAKCGSL 142
Query: 339 VQAREVFDKMPVRDLVSWNAILSGY 363
AR+VFD+M V+D+V+W ++++GY
Sbjct: 143 EIARQVFDEMCVKDVVTWTSMITGY 167
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 169/352 (48%), Gaps = 19/352 (5%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L+ Y+ G ++ A K+F + +D +++NAMV YS N A+ LF +
Sbjct: 149 DVFVGNALVDMYAKCGKMEDANKVFE--RMRFKDVVTWNAMVTGYSQNGRFEDALSLFGK 206
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ + D ++S+V+ S A+ + C+ + G C P+V+ TL+S CA
Sbjct: 207 MREEKIESDVVTWSSVI---SGYAQRGFGCEAMDVFRQMCGCRCRPNVV-TLMSLLSACA 262
Query: 190 S-STLVESPVLMASARK--LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-- 244
S L+ + K L E D +I Y + L AR + D +
Sbjct: 263 SVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPK 322
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG--IQMDEYTYTSLISASFNTGLFNCG 302
V W MI GY +HG A F +M + I +++T + ++ + N G
Sbjct: 323 DRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFG 382
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+Q+HAYVLR + S+ +L V N LI Y+K G + A+ VFD M R+ VSW ++L+G
Sbjct: 383 KQIHAYVLRRSLIYSD--VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTG 440
Query: 363 YINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
Y R E+A +F E+ + L +T+ V++ + SG + + LF +M
Sbjct: 441 YGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRM 492
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 49/286 (17%)
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK + PD ++F V A I+ E +H V++ G V N ++S Y C
Sbjct: 1 MKTLHWTPDHYTFPFVFKACGEISNFELG-ASIHGCVIRLGFESNVFVCNAVISMYGKCK 59
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ + ARK+FDE R + D +V
Sbjct: 60 A---------VVHARKVFDEL------------------------CYRGICD------SV 80
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
WN+++S Y + A FR+M GI D +++ GL CGRQ+H +
Sbjct: 81 TWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGF 140
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+R+ + + V NAL+ Y KCGK+ A +VF++M +D+V+WNA+++GY R
Sbjct: 141 CVRSGLVED----VFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGR 196
Query: 369 LEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
E+A +F E E +++TW+ +ISG A+ GFG E++ +F QM
Sbjct: 197 FEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM 242
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 141/317 (44%), Gaps = 51/317 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ L+ Y+ ++++A +F+ RD +++ M+ Y+ + D + A++LF
Sbjct: 292 DLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSE 351
Query: 130 MKR--DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M + + P+ F+ S VL + + ++ + +Q+H V++
Sbjct: 352 MFKIDNCIVPNDFTISCVLMSCARLSALNFG-KQIHAYVLR------------------- 391
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+L+ S VL + +I Y ++ D+ +A+ + D M+
Sbjct: 392 ---RSLIYSDVLFVA------------------NCLIDMYSKSGDVDTAQVVFDSMSKRN 430
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
AV+W ++++GY HG E+AF F +M + D T+ ++ A ++G+ + G L
Sbjct: 431 AVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFY 490
Query: 308 YVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSGYI 364
+ + V P EH+ ++ + G+L +A + + M + V W ++LS
Sbjct: 491 RMSKDFGVDPGVEHYA-----CMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACR 545
Query: 365 NARRLEEAKFIFREVPE 381
+E A+F +++ E
Sbjct: 546 THSNIELAEFAAKKLLE 562
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 61/363 (16%)
Query: 52 KSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
K N A LFDK P P+ S T+L+ Y + A F+ PV RDT S+N M
Sbjct: 84 KHGNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPV--RDTASWNTM- 140
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV 171
L G+A V++ +R L+A E +C V W
Sbjct: 141 ------LSGYAQVRMMDEARR-----------------LLVAMPEKNC-------VTWSA 170
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
M +S Y+ C + +A + F AP+ K +WT MI GY++
Sbjct: 171 M---------VSGYVACGD---------LDAAVECFYAAPM--KSVITWTAMITGYMKFG 210
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ A L ++ V WNAMI+GYV +G E F+ M G++ + + TS++
Sbjct: 211 RVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLL 270
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ G+Q+H V ++ + + S LI+ Y+KCG L + ++F ++P +
Sbjct: 271 GCSDLSALQTGKQVHQLVCKSPLSRDTTAVTS----LISMYSKCGDLKDSWDLFVQIPRK 326
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLF 407
D+V+WNA++SGY E+A +F E+ + + +T+ ++ +G + K F
Sbjct: 327 DVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYF 386
Query: 408 NQM 410
N M
Sbjct: 387 NSM 389
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Query: 219 SWTTMIAGYVR-NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
+W T++ + + + + AR+L D + P V++N M++ Y+ H A D F M
Sbjct: 73 TWNTILGAFAKKHGNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVR 132
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
D ++ +++S + + R+L V P ++ + +A+++ Y CG
Sbjct: 133 ----DTASWNTMLSGYAQVRMMDEARRL------LVAMPEKNCV--TWSAMVSGYVACGD 180
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
L A E F P++ +++W A+++GY+ R+ A+ +F ++ + L+TW MI+G ++
Sbjct: 181 LDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDN 240
Query: 398 GFGEESLKLFNQM 410
G E LKLF M
Sbjct: 241 GRAENGLKLFKTM 253
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-SFNTGLFNCGR 303
H +A N +I+ YVR G + A F H+M + + T+ +++ A + G F R
Sbjct: 37 HSNVIASNQLIASYVRSGDIDSALRVF---HNMTV-ISTTTWNTILGAFAKKHGNFERAR 92
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
QL + +P+ +S N L + G + AR+ FD MPVRD SWN +LSGY
Sbjct: 93 QL----FDKIPEPN---TVSYNTMLACYLHHFG-IHNARDFFDWMPVRDTASWNTMLSGY 144
Query: 364 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLF 407
R ++EA+ + +PE+N +TW+ M+SG G + +++ F
Sbjct: 145 AQVRMMDEARRLLVAMPEKNCVTWSAMVSGYVACGDLDAAVECF 188
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 162/400 (40%), Gaps = 69/400 (17%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HAH L P + +I +Y + +A +FDK+ D S T L++ Y +
Sbjct: 150 GKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVS 209
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G + A +LF+ PV +D +S+NAM+ Y + A+ F M+ P+ +
Sbjct: 210 QGCLDDARRLFDEIPV--KDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKW--------GVMCVPSVLNTLLSCYICCASSTLVE 195
VL A E + KW G + N L+ Y C + +
Sbjct: 268 VVLSACGHTRSGE---------LGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI-- 316
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
AR+L DG+ ++WN MI
Sbjct: 317 ----------------------------------------ARELFDGIEEKDVISWNTMI 336
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
GY LYEEA F M ++ ++ T+ ++ A G + G+ +HAY+ + +
Sbjct: 337 GGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN 396
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
S S+ +LI Y KCG + A VF M R+L SWNA+LSG+ E A +
Sbjct: 397 SSN---ASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALAL 453
Query: 376 FREVPERNL-----LTWTVMISGLAESGFGEESLKLFNQM 410
F E+ + L +T+ ++S ++G + + F M
Sbjct: 454 FSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 21/349 (6%)
Query: 51 CKSSN-IPYAHHLFDKTP-NPDIFSRTTLL--SAYSAAGNVKLAEKLFNATPVTLRDTI- 105
CK+ N H L KT N +F ++ L+ A S +G++ A LF + +
Sbjct: 38 CKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVF 97
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
+N++++ YS + +++ LF RM G P+ +F + + + A+ +QLH
Sbjct: 98 IWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTK-AKATHEGKQLHAH 156
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
+K + P V +++ Y M AR +FD++ L +D S+T +I
Sbjct: 157 ALKLALHFNPHVHTSVIHMYASVGE---------MDFARLVFDKSSL--RDAVSFTALIT 205
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 285
GYV L AR+L D + V+WNAMISGYV+ G +EEA F +M + ++ T
Sbjct: 206 GYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKST 265
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
++SA +T G+ + ++V + L + NALI Y KCG+ ARE+F
Sbjct: 266 MVVVLSACGHTRSGELGKWIGSWVRDNGFGSN----LQLTNALIDMYCKCGETDIARELF 321
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
D + +D++SWN ++ GY EEA +F + N+ V G+
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGI 370
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN++I GY + F +M G+Q + +T+ L + + G+QLHA+ L
Sbjct: 99 WNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHAL 158
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + HF V+ ++I Y G++ AR VFDK +RD VS+ A+++GY++ L+
Sbjct: 159 KLAL----HFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLD 214
Query: 371 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+A+ +F E+P +++++W MISG +SG EE++ F +M+
Sbjct: 215 DARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 57/315 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
L+ Y G +A +LF+ + +D IS+N M+ YS+ A+ LF M R
Sbjct: 302 NALIDMYCKCGETDIARELFDG--IEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSN 359
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ +F +L A + + D+ KW + YI
Sbjct: 360 VKPNDVTFLGILHACACLGA---------LDLGKW------------VHAYI-------- 390
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
D+ + + WT++I Y + + +A ++ M +WNAM
Sbjct: 391 -------------DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAM 437
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+SG+ HG E A F +M + G+ + D+ T+ ++SA GL + G Q +++
Sbjct: 438 LSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDY 497
Query: 314 -VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLE 370
+ P +H+ +I + K +A + M + D W ++LS R+E
Sbjct: 498 GISPKLQHY-----GCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552
Query: 371 EAKFI----FREVPE 381
+++ F+ PE
Sbjct: 553 FGEYVAERLFQLEPE 567
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 46/371 (12%)
Query: 56 IPYAHHLFDKT----PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
+PY L ++ + D+F T +++AY+ G V A K+F+ P R+ +++NAM+
Sbjct: 67 LPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPE--RNVVTWNAMI 124
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM-----SLIAEEEWHCQQLHC-D 165
Y N D +A+ F M S+S ++G +L A + + D
Sbjct: 125 GGYLRNGDAKSALLAFEEMP----GKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKD 180
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
VV W VM + Y M AR++F+ P +++ W++M+
Sbjct: 181 VVIWTVM---------VDGY---------AKKGEMEDAREVFELMP--ERNYFVWSSMVC 220
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 285
GY + D+ A + + WN+MI+GYV++G E+A + F +M G + DE+T
Sbjct: 221 GYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFT 280
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
S++SA G + G+Q+H +++ F+LS LI Y KCG LV AR VF
Sbjct: 281 VVSVLSACAQLGDLDAGKQMH-HMIECKGIAVNQFVLS---GLIDMYAKCGDLVNARLVF 336
Query: 346 DKMPVRDLVSWNAILSGY-INARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFG 400
+ R++ WNA+++G+ +N + E +++ R + E N+ +T+ ++S A G
Sbjct: 337 ESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDR-MQESNIRLDAVTFITVLSACAHGGLM 395
Query: 401 EESLKLFNQMK 411
E+L++ ++M+
Sbjct: 396 SEALEVISKME 406
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 55/314 (17%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT 100
+I ++D Y K + A +F+ P + F ++++ Y G+V AE +F PV
Sbjct: 182 VIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPV- 240
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ 160
R+ +N+M+ Y N G A++ F M DGF PD F+ +VL A + + + + +
Sbjct: 241 -RNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLD-AGK 298
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
Q+H + G+ VL+ L+ Y C
Sbjct: 299 QMHHMIECKGIAVNQFVLSGLIDMYAKCG------------------------------- 327
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
DL +AR + + WNAMI+G+ +G E + +M I+
Sbjct: 328 -----------DLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIR 376
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI---LSVNNALITFYTKCGK 337
+D T+ +++SA + GL + L + + E+ I + ++ + GK
Sbjct: 377 LDAVTFITVLSACAHGGLM-------SEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGK 429
Query: 338 LVQAREVFDKMPVR 351
L +A E+ +MP++
Sbjct: 430 LKEAYELIKRMPMK 443
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 167/349 (47%), Gaps = 23/349 (6%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+P+ F R LL Y + A KLF+ P + +D++ Y A+++ + ++KLF
Sbjct: 54 SPNHFLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIR----HCPPFESLKLF 109
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYI 186
++M++ D L A + + + Q+H VVK+G + V N L++ Y+
Sbjct: 110 IQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYV 169
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
L+ ARK+F+ + + SW+ + G V+ + + S R L D M
Sbjct: 170 ---------KFGLVGEARKMFE--GIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPER 218
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
VAW MI GYV +G +EAF ++M G ++ T S++SA +G GR +
Sbjct: 219 NEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWV 278
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H Y ++ + F + V +L+ Y KCG++ A VF M R++V+WNA+L G
Sbjct: 279 HCYAVKEM---GLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAM 335
Query: 366 ARRLEEAKFIFREVPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ A +F + E + +T+ ++S + SG E+ F+ ++
Sbjct: 336 HGMGKIAVDMFPSMVEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLE 384
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 180/395 (45%), Gaps = 58/395 (14%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKS-----SNIPYAHHLFDKTPNPDIFSRTTLLS 79
+ HA + TTG +R++ +C S ++ YA +F++ NP +
Sbjct: 22 KQAHAQVFTTGLENNTFALSRVL-AFCSSHKHHHESLTYACRVFEQIQNPTV-------- 72
Query: 80 AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
YN ++KA+ N +A+++FV+M + PD
Sbjct: 73 -------------------------CIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDN 107
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
++ VL A + + + +H K G++ V N+L++ Y C +V
Sbjct: 108 YTIPYVLKACGTFHDCSFG-KMIHGYSSKLGLVFDIYVGNSLMAMY--CVFGDVV----- 159
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+AR +FDE P + SW+ MI+GY + D+ SAR D W AMISGYV
Sbjct: 160 --AARYVFDEIP--SLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYV 215
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++ ++E+ FR M I DE + S++SA + G G +H ++ + + P
Sbjct: 216 QNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVP--- 272
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+ ++ +L+ Y KCG L A+ +FD M +RD+V WNA++SG + A +F ++
Sbjct: 273 LSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDM 332
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ + +T+ + + + SG E L L ++M
Sbjct: 333 EKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKM 367
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 143/365 (39%), Gaps = 56/365 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ + IH + G + N L+ +YC ++ A ++FD+ P+ ++ S + ++S Y
Sbjct: 124 SFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGY 183
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G+V A F+ P +D + AM+ Y N ++ LF M+ PD
Sbjct: 184 AKVGDVDSARLFFDEAPE--KDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESI 241
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F ++L A CA +E V +
Sbjct: 242 FVSILSA---------------------------------------CAHLGALEIGVWIH 262
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
PLS + S M Y + +L A++L D M V WNAMISG H
Sbjct: 263 QHLNQLKLVPLSVRLSTSLLDM---YAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMH 319
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL--HAYVLRTVVQPSEH 319
G + A F M +G++ D+ T+ ++ +A +G+ G L + +V SEH
Sbjct: 320 GDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEH 379
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMP-----VRDLVSWNAILSGYINARRLEEAKF 374
+ L+ ++ G +A + K+ + ++W A LS N + A+
Sbjct: 380 Y-----GCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAEL 434
Query: 375 IFREV 379
+V
Sbjct: 435 AAEKV 439
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
++ L A ++ + + +P +N +I ++ + ++ A F KM ++ D YT +
Sbjct: 54 HESLTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYV 113
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ A + G+ +H Y + + F + V N+L+ Y G +V AR VFD++P
Sbjct: 114 LKACGTFHDCSFGKMIHGYSSKLGLV----FDIYVGNSLMAMYCVFGDVVAARYVFDEIP 169
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
++VSW+ ++SGY ++ A+ F E PE++ W MISG ++ +ESL LF
Sbjct: 170 SLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRL 229
Query: 410 MK 411
M+
Sbjct: 230 MQ 231
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 79/396 (19%)
Query: 32 LTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA-----YSAAGN 86
L G ++ P I L++ + I + L P P + R +S+ Y++ G
Sbjct: 103 LEKGIKIDPEIYASLLETCYRFGAIHHGIWLHRLIP-PALLHRNVGISSKLVRLYASFGY 161
Query: 87 VKLAEKLFNATPVTLRDTISY--NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
+ A LF+ +T RD ++ N+++ Y+ A+ L+ +M +G PD F+F
Sbjct: 162 MDDAHDLFDQ--MTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPR 219
Query: 145 VL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
VL G + L+ E ++H VV+ G VLN L+ Y C
Sbjct: 220 VLKVCGGIGLVGVGE----EVHRHVVRCGFWDDGFVLNALVDMYSKCG------------ 263
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
D+ ARK+ + M +V+WN+M++GYVRH
Sbjct: 264 ------------------------------DIVKARKIFNKMHFRDSVSWNSMLTGYVRH 293
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
GL EA + FR+M G + D ++ ++++++ + G Q+H +V+R V+ +
Sbjct: 294 GLEVEAINIFRQMVLKGEKPDYFSISAILTS---VSSLDVGVQIHGWVIRQGVE----WN 346
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA-------RRLEEAKF 374
LS+ N+LI Y+K G+L +AR +F+ MP RD+VSWN+I+S + ++EEA
Sbjct: 347 LSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHCKHPEAISYFEKMEEAG- 405
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
EVP++ +T+ ++S A G + +LF M
Sbjct: 406 ---EVPDK--ITFVSLLSACAHLGLVNDGERLFALM 436
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
E+ + GI++D Y SL+ + G + G LH R + H + +
Sbjct: 93 EQVLNDLEASLEKGIKIDPEIYASLLETCYRFGAIHHGIWLH----RLIPPALLHRNVGI 148
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVS--WNAILSGYINARRLEEAKFIF----RE 378
++ L+ Y G + A ++FD+M RD+ + WN+++SGY ++A ++ E
Sbjct: 149 SSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEE 208
Query: 379 VPERNLLTWTVMI---SGLAESGFGEE 402
E ++ T+ ++ G+ G GEE
Sbjct: 209 GVEPDIFTFPRVLKVCGGIGLVGVGEE 235
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 168/363 (46%), Gaps = 32/363 (8%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ D+F LL+ Y G+V A K+F+ + V RD +S+N M+ ++ D
Sbjct: 143 HVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFV--RDCVSFNTMINGFARKGDV 200
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS---V 177
++F M+ PD ++F +L S++ E+ +Q+H +V + C +
Sbjct: 201 SGCFRVFGEMRGVCVRPDEYTFVALLSGCSVL-EDYRIGRQVH-GLVYRELGCFGGNVLL 258
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
+N L+ Y C + E+ + + K A WT++++ Y ++ AR
Sbjct: 259 VNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAA---------WTSLVSAYALRGEVKVAR 309
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
+L D M V+W AMISGY G ++EA + F K+ +G++ DE + +SA G
Sbjct: 310 RLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLG 369
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVN----NALITFYTKCGKLVQAREVFDKMP--VR 351
GR++H E++ S+N +A++ Y KCG + A +VF K +
Sbjct: 370 ALELGRRIHRQ------YAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKK 423
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLF 407
+N+I+SG + R E AK +F E+ L +T+ ++S G + KLF
Sbjct: 424 TTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLF 483
Query: 408 NQM 410
M
Sbjct: 484 ESM 486
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 52/321 (16%)
Query: 97 TPVTLRDTISYNAMVKAYS--HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS--LI 152
T +T D +NA++KAYS H+ H LF M PD F+F +L A + LI
Sbjct: 73 TQITNPDIFLWNAIIKAYSQIHSPPQHP-FSLFKTMLNSSVLPDSFTFPFLLKACANVLI 131
Query: 153 AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPL 212
+ ++ Q +HC V++ G V N LL+ Y C +V +A K+FDE+
Sbjct: 132 SAPQFGFQ-VHCHVLRNGFGSDVFVNNALLNFY--CGFGDVV-------NAYKVFDES-- 179
Query: 213 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 272
+VR+ V++N MI+G+ R G F F
Sbjct: 180 --------------FVRD-----------------CVSFNTMINGFARKGDVSGCFRVFG 208
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
+M + ++ DEYT+ +L+S + GRQ+H V R + + +L N L+ Y
Sbjct: 209 EMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLV--NKLVDMY 266
Query: 333 TKCGKLVQAREVFDKM-PVRDLVS-WNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 390
KCG+LV A V + P + +V+ W +++S Y ++ A+ +F ++ ER++++WT M
Sbjct: 267 AKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAM 326
Query: 391 ISGLAESGFGEESLKLFNQMK 411
ISG + +G +E+L+LF +++
Sbjct: 327 ISGYSHAGCFQEALELFVKLE 347
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 169/349 (48%), Gaps = 26/349 (7%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F T L++ Y+ V+ A+ +F+ P R+ +++N++ Y + + +F
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMP--HRNVVTWNSLSSCYVNCGFPQKGLNVFRE 434
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M +G PD + ++L A S + + + + +H V+ G++ V N LLS Y C
Sbjct: 435 MVLNGVKPDLVTMLSILHACSDLQDLK-SGKVIHGFAVRHGMVEDVFVCNALLSLYAKC- 492
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA- 248
V + A+ +FD P ++ SW ++ Y N + + M
Sbjct: 493 --------VCVREAQVVFDLIP--HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 249 ---VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
+ W+ +I G V++ EEA + FRKM +MG + DE T S++ A + G+++
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H YV R + + L+ NAL+ Y KCG L +R VFD MP++D+ SWN ++
Sbjct: 603 HCYVFRH----WKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGM 658
Query: 366 ARRLEEAKFIFRE----VPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+EA +F + + + + T+T ++S + S EE +++FN M
Sbjct: 659 HGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSM 707
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 162/346 (46%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F L++ Y + V+ A+ +F+ P R+ I++N++ Y + + +F
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMP--HRNVITWNSLASCYVNCGFPQKGLNVFRE 333
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M +G PDP + S++L A S + + + + +H VK G+ V V ++C A
Sbjct: 334 MGLNGVKPDPMAMSSILPACSQLKDLK-SGKTIHGFAVKHGM--VEDV-------FVCTA 383
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L + + + A+ +FD P H V
Sbjct: 384 LVNLYANCLCVREAQTVFDLMP---------------------------------HRNVV 410
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WN++ S YV G ++ + FR+M G++ D T S++ A + G+ +H +
Sbjct: 411 TWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFA 470
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R + + V NAL++ Y KC + +A+ VFD +P R++ SWN IL+ Y +
Sbjct: 471 VRHGMVED----VFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEY 526
Query: 370 EEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E+ ++F R+ + + +TW+V+I G ++ EE++++F +M+
Sbjct: 527 EKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ 572
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 47/257 (18%)
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A+K++ + G PD F V A + + + +Q H D + GVM S+ N +
Sbjct: 24 AIKIYTSSRARGIKPDKPVFMAVAKACA-ASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
Y C + AR++FD+ L +D
Sbjct: 83 HAYGKCKC---------VEGARRVFDD--LVARD-------------------------- 105
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
V WN++ + YV G ++ + FRKM ++ + T +S++ + G
Sbjct: 106 -----VVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSG 160
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+++H +V+R + + V++A + FY KC + +A+ VFD MP RD+V+WN++ S
Sbjct: 161 KEIHGFVVRHGMVED----VFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSC 216
Query: 363 YINARRLEEAKFIFREV 379
Y+N ++ +FRE+
Sbjct: 217 YVNCGFPQKGLNVFREM 233
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 140/310 (45%), Gaps = 49/310 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ + AY V+ A ++F+ + RD +++N++ Y + + +F +
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFD--DLVARDVVTWNSLSACYVNCGFPQQGLNVFRK 131
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M + +P + S++L S + + + +++H VV+ G
Sbjct: 132 MGLNKVKANPLTVSSILPGCSDLQDLK-SGKEIHGFVVRHG------------------- 171
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+VE V ++SA + Y + + A+ + D M H V
Sbjct: 172 ---MVED-VFVSSA-------------------FVNFYAKCLCVREAQTVFDLMPHRDVV 208
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WN++ S YV G ++ + FR+M G++ D T + ++SA + G+ +H +
Sbjct: 209 TWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFA 268
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+ + + + V+NAL+ Y C + +A+ VFD MP R++++WN++ S Y+N
Sbjct: 269 LKHGMVEN----VFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFP 324
Query: 370 EEAKFIFREV 379
++ +FRE+
Sbjct: 325 QKGLNVFREM 334
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 141/356 (39%), Gaps = 80/356 (22%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH ++ G + + ++ Y K + A +FD P+ D+ + +L S Y
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVN 219
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G +K N +F M DG PDP + S
Sbjct: 220 CG---FPQKGLN------------------------------VFREMVLDGVKPDPVTVS 246
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+L A S + + + + +H +K G++ V N L++ Y ES + + A
Sbjct: 247 CILSACSDLQDLK-SGKAIHGFALKHGMVENVFVSNALVNLY---------ESCLCVREA 296
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+ +FD P H + WN++ S YV G
Sbjct: 297 QAVFDLMP---------------------------------HRNVITWNSLASCYVNCGF 323
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
++ + FR+M G++ D +S++ A G+ +H + ++ + +
Sbjct: 324 PQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVED----VF 379
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
V AL+ Y C + +A+ VFD MP R++V+WN++ S Y+N ++ +FRE+
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREM 435
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 80/341 (23%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + ++ Y+ V+ A+ +F+ P RD +++N++ Y + + +F
Sbjct: 175 DVFVSSAFVNFYAKCLCVREAQTVFDLMP--HRDVVTWNSLSSCYVNCGFPQKGLNVFRE 232
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M DG PDP + S +L A S + + + + +H +K G++ V N L++ Y
Sbjct: 233 MVLDGVKPDPVTVSCILSACSDLQDLK-SGKAIHGFALKHGMVENVFVSNALVNLY---- 287
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
ES + + A+ +FD P H +
Sbjct: 288 -----ESCLCVREAQAVFDLMP---------------------------------HRNVI 309
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WN++ S YV G ++ + FR+M G++ D +S++ A G+ +H +
Sbjct: 310 TWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFA 369
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ + V D+ A+++ Y N +
Sbjct: 370 VKHGM-----------------------------------VEDVFVCTALVNLYANCLCV 394
Query: 370 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
EA+ +F +P RN++TW + S GF ++ L +F +M
Sbjct: 395 REAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREM 435
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 165/383 (43%), Gaps = 65/383 (16%)
Query: 11 LAQLNHPSATQTL--ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN 68
L+ L+ S Q L + IH + G + N L+ +Y K + A +FD P+
Sbjct: 448 LSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPH 507
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLF---NATPVTLRDTISYNAMVKAYSHNLDGHAAVK 125
++ S +L+AY + +F N V D I+++ ++ N A++
Sbjct: 508 REVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK-ADEITWSVVIGGCVKNSRIEEAME 566
Query: 126 LFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVK----WGVMCVPSVLNTL 181
+F +M+ GF PD + ++L A SL +E +++HC V + W + + N L
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSL-SECLRMGKEIHCYVFRHWKDWDL----ARTNAL 621
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y C +L +R +FD P+ KD SW TMI +
Sbjct: 622 VDMYAKCGGLSL---------SRNVFDMMPI--KDVFSWNTMI--------------FAN 656
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
GM HG +EA F KM ++ D T+T ++SA ++ L
Sbjct: 657 GM-----------------HGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEE 699
Query: 302 GRQLHAYVLRT-VVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNA 358
G Q+ + R +V+P +EH+ ++ Y++ G L +A +MP+ ++W A
Sbjct: 700 GVQIFNSMSRDHLVEPEAEHY-----TCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKA 754
Query: 359 ILSGYINARRLEEAKFIFREVPE 381
L+G + +E AK +++ E
Sbjct: 755 FLAGCRVYKNVELAKISAKKLFE 777
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
+ HGL EA + + GI+ D+ + ++ A + +Q H R V
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSD- 74
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
+S+ NA I Y KC + AR VFD + RD+V+WN++ + Y+N ++ +FR+
Sbjct: 75 ---VSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRK 131
Query: 379 VP----ERNLLTWTVMISGLAE 396
+ + N LT + ++ G ++
Sbjct: 132 MGLNKVKANPLTVSSILPGCSD 153
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 60/348 (17%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F TTL+ Y G + A K+F+ ++ R+ +S+ AMV Y D A K+F
Sbjct: 147 DQDLFVGTTLVDMYGKCGEIGDARKVFD--ELSDRNVVSWTAMVVGYVTAGDVVEAKKVF 204
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M P +V W N ++ ++
Sbjct: 205 DEM--------PLR-----------------------NVASW---------NAMIRGFVK 224
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
++SAR +FD P +K+ S+TTMI GY + D+ S+R L +
Sbjct: 225 VGD---------LSSARGVFDSMP--EKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEKD 273
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
VAW+A+ISGYV++G EA F +M SM + DE+ SL+SA+ G +++ +
Sbjct: 274 VVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLKLAQRVDS 333
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
YV + + + +++S AL+ KCG + +A ++F +MP RDLVS+ +++ G+
Sbjct: 334 YVDNSSIDLQQDYVIS---ALVDMNAKCGNMERALKLFREMPKRDLVSYCSMIHGFSIHG 390
Query: 368 RLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
E+A +F + ++ +T++++ + SG ++ K FN M+
Sbjct: 391 HGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSME 438
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
L+ + + + + +P WN I + + + + F +M + G D YTY S+I A
Sbjct: 65 LSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKA 124
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
T G+ +H V R + L V L+ Y KCG++ AR+VFD++ R+
Sbjct: 125 CSGTCKVLVGKSVHGSVFRCGLDQD----LFVGTTLVDMYGKCGEIGDARKVFDELSDRN 180
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+VSW A++ GY+ A + EAK +F E+P RN+ +W MI G + G + +F+ M
Sbjct: 181 VVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSM 238
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 63/398 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIP---YAHHLFDKTPNPDIFSRTTLLSA 80
A+ +HAHI + + L+ +IP Y H LF + +P+ F
Sbjct: 27 AKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFL------- 79
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y+A+++AY+ N H +++L+ M + +P F
Sbjct: 80 --------------------------YSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSF 113
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+FS + SL+ QLH +G + V NT++ Y+ ++
Sbjct: 114 TFSALF---SLLKNPSLG-SQLHLHAFLFGFVNDLYVGNTIIHMYVKFG---------VL 160
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
ARK+FDE P +D +WT +I Y R+ D+ SA +L G+ VAW +M++GY +
Sbjct: 161 DCARKVFDEMP--HRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQ 218
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+ + ++A FRKM G+ DE T ISA G+ +A +R + + S
Sbjct: 219 NAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSG-----YADWIREIAESSRFG 273
Query: 321 ILS---VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
S V +ALI Y+KCG + +A VF M ++ S+++++ G+ R A +F
Sbjct: 274 SGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFY 333
Query: 378 EVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
E+ E N +T+ + + + +G E+ +LF MK
Sbjct: 334 EMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMK 371
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
S T + LF + L +PS L +H H GF + N +I +Y K + A +
Sbjct: 112 SFTFSALF-SLLKNPS----LGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKV 166
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FD+ P+ D+ + T L+ AY+ +G++ A +LF PV +D +++ +MV YS N
Sbjct: 167 FDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPV--KDMVAWTSMVTGYSQNAMPKK 224
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A++ F +M+ G D T++GA+S C QL GV +
Sbjct: 225 ALQFFRKMREAGVVTDEI---TLVGAISA-------CAQL-------GVSGYADWIRE-- 265
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
I +S S V + SA +I Y + ++ A + G
Sbjct: 266 ---IAESSRFGSGSNVFVGSA-------------------LIDMYSKCGNVEEAYNVFKG 303
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
M ++++MI G+ HG A F +M GI+ + T+ L +A + G+ G
Sbjct: 304 MKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQG 363
Query: 303 RQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAI 359
+QL + V P+ +H+ + + G L +A ++ MP+ + W A+
Sbjct: 364 QQLFGAMKECYGVSPTADHYA-----CMADLLGRAGHLEKALQLVQTMPMEPNGGVWGAL 418
Query: 360 LS 361
L
Sbjct: 419 LG 420
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 22/315 (6%)
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE--WHCQQ 161
T+S+ + + + N + A F++M P+ + T+L A + +
Sbjct: 52 TVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAA 111
Query: 162 LHCDVVKWGVMCVPSVLNT-LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
LH K G ++ T L+ Y C + AR +FD+ + ++ SW
Sbjct: 112 LHTHAFKHGFAMNDVMVGTALIDMYAKCGK---------LDYARLVFDQ--MGVRNLVSW 160
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
TMI GY++N D+ A KL D + V+W +I G+V+ YEEA + FR+M G+
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D T ++ISA N G G +H V++ + + + V N+LI Y +CG +
Sbjct: 221 PDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDN----VKVLNSLIDMYARCGCIEL 276
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR----EVPERNLLTWTVMISGLAE 396
AR+VFD M R+LVSWN+I+ G+ ++A FR E E N +++T ++ +
Sbjct: 277 ARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSH 336
Query: 397 SGFGEESLKLFNQMK 411
+G +E LK+F +K
Sbjct: 337 AGLIDEGLKIFADIK 351
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 153/356 (42%), Gaps = 66/356 (18%)
Query: 5 TMANLFLAQLNHPSATQ-TLARAIHAHILTTGFRLTP-LIRNRLIDIYCKSSNIPYAHHL 62
T+ L A + PS T T A+H H GF + ++ LID+Y K + YA +
Sbjct: 89 TLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLV 148
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FD+ ++ S T++ Y G+V A KLF+ PV ++ +S+ ++ +
Sbjct: 149 FDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPV--KNVVSWTVVIGGFVKKECYEE 206
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE------WHCQQLHCDVVKWGVMCVPS 176
A++ F M+ G PD F TV+ +S A W +H V+K
Sbjct: 207 ALECFREMQLAGVVPD---FVTVIAIISACANLGALGLGLW----VHRLVMKKEFRDNVK 259
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
VLN+L+ Y C L A
Sbjct: 260 VLNSLIDMYARCGCIEL------------------------------------------A 277
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
R++ DGM+ V+WN++I G+ +GL ++A FR M G++ + +YTS ++A +
Sbjct: 278 RQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHA 337
Query: 297 GLFNCGRQLHAYVLRTVVQPS--EHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
GL + G ++ A + R EH+ L+ Y++ G+L +A +V KMP+
Sbjct: 338 GLIDEGLKIFADIKRDHRNSPRIEHY-----GCLVDLYSRAGRLKEAWDVIKKMPM 388
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 160/347 (46%), Gaps = 43/347 (12%)
Query: 73 SRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR 132
++ SA S GN+ A LF + + + + N M++A+SH+ A+ ++ +M
Sbjct: 42 TKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLI 101
Query: 133 DGFAPDPFSFSTVLGAMSL---IAEEEWHCQ--------------QLHCDVVKWGVMCVP 175
+ D ++ + VL A S + +E C ++HC V+K G P
Sbjct: 102 NNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDDDNLVVVYNKGTEIHCRVIKIGFQNDP 161
Query: 176 SVLNTLLSCYICCA------------SSTLVESPVLMASARKLFDEAPLSQ--------K 215
SV N+LL Y C T + S +M SA D+ L+ K
Sbjct: 162 SVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCK 221
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
SW T+IA Y+R D+ +AR++ M AV+WN+MI+G V Y A + F +M
Sbjct: 222 TVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQ 281
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS-VNNALITFYTK 334
+ G++ E T S++ A TG G +++ ++ EH I S + NAL+ Y K
Sbjct: 282 NAGVKPTEVTLISILGACAETGALEIGHKIY-----ESLKVCEHKIESYLGNALVNMYCK 336
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
CG L A E+F+ M ++ + WNA++ G EE +F E+ E
Sbjct: 337 CGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEE 383
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 185/396 (46%), Gaps = 34/396 (8%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH ++ GF+ P ++N L+ Y + + A +LFD+ + + S ++SAY +
Sbjct: 148 IHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDD 207
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM-KRDGFAPDPFSFSTV 145
+LA+ L P + IS+N ++ Y D AA ++F M +R+ + + S +
Sbjct: 208 YELADHLLELMPC--KTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWN----SMI 261
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
G +S+ + +L ++ GV P+ + TL+S CA + +E K
Sbjct: 262 AGCVSV--RDYAGALELFSEMQNAGVK--PTEV-TLISILGACAETGALE------IGHK 310
Query: 206 LFDEAPLSQKDEPSW--TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+++ + + S+ ++ Y + +L+ A ++ +GM WNAM+ G HG
Sbjct: 311 IYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGY 370
Query: 264 YEEAFDTFRKM-HSMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSE 318
EE F F +M S+G I+ D T+ ++ A + GL + R ++++ +V S+
Sbjct: 371 CEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSK 430
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILSGYINARRLEEAKFIFR 377
H+ ++ T+ G L +A ++ P ++ +V W +L E A+ F+
Sbjct: 431 HY-----GCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFK 485
Query: 378 EVPERNLLT---WTVMISGLAESGFGEESLKLFNQM 410
++ + L + ++ + AE+G +E +L ++M
Sbjct: 486 QLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEM 521
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 35/145 (24%)
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK---------- 347
++N G ++H V++ Q SV N+L+ FY++CG + AR +FD+
Sbjct: 141 VYNKGTEIHCRVIKIGFQNDP----SVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWN 196
Query: 348 ---------------------MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLT 386
MP + ++SWN +++ YI ++ A+ +F +PERN ++
Sbjct: 197 IMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVS 256
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
W MI+G +L+LF++M+
Sbjct: 257 WNSMIAGCVSVRDYAGALELFSEMQ 281
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 62/347 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T+L+ Y G+V A K+F+ +++R +S+ A++ Y+ D A KLF
Sbjct: 157 DLYVGTSLVDMYVKFGDVGFARKVFD--EMSVRSLVSWTAVIVGYARCGDMVEARKLF-- 212
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
DG DV + N ++ Y+
Sbjct: 213 ---DGMVDR--------------------------DV---------AAFNVMIDGYVKMG 234
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L AR LFD+ + K+ SWT+M+ GY + D+ AR L D M +
Sbjct: 235 RMDL---------ARDLFDK--MRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVL 283
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+WNAMI GY ++G +A F +M ++ ++M+E T S++ A + + G +H +
Sbjct: 284 SWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGF 343
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INA- 366
V R + S H V NAL+ Y KCG++ +A+ VF++M +D SWNA+++GY +N
Sbjct: 344 VQRNQLDGSVH----VCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGC 399
Query: 367 --RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
LE + RE E N +T T ++S G EE + F M+
Sbjct: 400 AKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAME 446
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 64/298 (21%)
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF-APDPFSFSTV 145
V+ A FN TP D N ++ A+ + L+ + +D F P ++F+ +
Sbjct: 70 VQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLI 129
Query: 146 LGAMSLIAEEEWHCQQLHCDVVK-WGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS-- 202
L S +++ + Q+H V+K W C L Y+ ++LV+ V
Sbjct: 130 LKGCS-VSDAKRQGFQIHGVVLKNW--FC--------LDLYV---GTSLVDMYVKFGDVG 175
Query: 203 -ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
ARK+FDE +S + SWT +I GY R D+ ARKL DGM A+N MI GYV+
Sbjct: 176 FARKVFDE--MSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKM 233
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G + A D F KM + ++TS++
Sbjct: 234 GRMDLARDLFDKMRVKNV----ISWTSMVHG----------------------------- 260
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
Y++ G + +AR +FD MP ++++SWNA++ GY R +A +F E+
Sbjct: 261 ----------YSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEM 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 58/359 (16%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH +L F L + L+D+Y K ++ +A +FD+ + S T ++ Y+ G+
Sbjct: 145 IHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGD 204
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+ A KLF+ + RD ++N M+ Y V+M R A D F V
Sbjct: 205 MVEARKLFDG--MVDRDVAAFNVMIDGY-------------VKMGRMDLARDLFDKMRVK 249
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVP--SVL--NTLLSCYICCASSTLVESPVLMAS 202
+S + + + D ++ C+P +VL N ++ Y C + ++ L
Sbjct: 250 NVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGY--CQNGRSHDALKLFCE 307
Query: 203 ARKLFD--------------EAPLSQKDEPSWT-----------------TMIAGYVRND 231
R D A LS D W ++ Y +
Sbjct: 308 MRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCG 367
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
++ A+ + + MT +WNA+I+GY +G +EA + F M G + ++ T TS++S
Sbjct: 368 EIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLS 427
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
A + GL GR+ + R + P EH+ +I + G+L +A ++ MP
Sbjct: 428 ACNHCGLVEEGRRCFEAMERFGIVPQIEHY-----GCMIDLLGRAGRLDEAEKLIQAMP 481
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
YT+T ++ + G Q+H VL+ L V +L+ Y K G + AR+
Sbjct: 124 YTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLD----LYVGTSLVDMYVKFGDVGFARK 179
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 403
VFD+M VR LVSW A++ GY + EA+ +F + +R++ + VMI G + G + +
Sbjct: 180 VFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLA 239
Query: 404 LKLFNQMK 411
LF++M+
Sbjct: 240 RDLFDKMR 247
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 173/394 (43%), Gaps = 49/394 (12%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H+ I++ G + + +L+ +Y ++ +FDK N +F L+S Y+
Sbjct: 113 GKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 172
Query: 84 AGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP-- 139
GN + + LF + + ++ ++K ++ ++ + + GF +
Sbjct: 173 IGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAV 232
Query: 140 --------FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN------------ 179
F F V A +L E DVV W M V+N
Sbjct: 233 VNSLIAAYFKFGGVESAHNLFDELS------EPDVVSWNSMINGCVVNGFSGNGLEIFIQ 286
Query: 180 -----------TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 228
TL+S + CA+ + + A F ++ T++ Y
Sbjct: 287 MLILGVEVDLTTLVSVLVACANI----GNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 342
Query: 229 RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 288
+ +L A ++ M V+W ++I+ YVR GLY +A F +M S G++ D YT TS
Sbjct: 343 KCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 402
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
++ A + + GR +H+YV++ + + L V NALI Y KCG + +AR VF K+
Sbjct: 403 IVHACACSSSLDKGRDVHSYVIKNGMGSN----LPVTNALINMYAKCGSVEEARLVFSKI 458
Query: 349 PVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
PV+D+VSWN ++ GY EA +F ++ ++
Sbjct: 459 PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ 492
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 173/415 (41%), Gaps = 87/415 (20%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+D T+ ++ +A N +L RA+H + F + N L+D+Y K N+ A
Sbjct: 294 VDLTTLVSVLVACAN--IGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+F K + I S T++++AY G YS
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREG---------------------------LYSD---- 380
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ LF M+ G PD ++ ++++ A + + + + +H V+K G+ V N
Sbjct: 381 --AIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD-KGRDVHSYVIKNGMGSNLPVTNA 437
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L++ Y C S + AR +F + P+ KD
Sbjct: 438 LINMYAKCGS---------VEEARLVFSKIPV--KD------------------------ 462
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
V+WN MI GY ++ L EA + F M + D+ T ++ A +
Sbjct: 463 -------IVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALD 514
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
GR++H ++LR H V AL+ Y KCG LV A+ +FD +P +DL+SW ++
Sbjct: 515 KGREIHGHILRRGYFSDLH----VACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 570
Query: 361 SGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+GY EA F E+ E + +++ +++ + SG E K FN M+
Sbjct: 571 AGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMR 625
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 59/342 (17%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ Y+ G+V+ A +F+ PV +D +S+N M+ YS NL + A++LF+ M++ F
Sbjct: 438 LINMYAKCGSVEEARLVFSKIPV--KDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FK 494
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD + + VL A + +A + +++H +++ G V L+ Y C
Sbjct: 495 PDDITMACVLPACAGLAALD-KGREIHGHILRRGYFSDLHVACALVDMYAKCG------- 546
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
L+ A+ LFD P +KD SWT MI+
Sbjct: 547 --LLVLAQLLFDMIP--KKDLISWTV-------------------------------MIA 571
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQ 315
GY HG EA TF +M GI+ DE +++++++A ++GL N G + ++ V+
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVE 631
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YINARRLE 370
P EH+ ++ + G L +A + + MP++ D W +LSG + + + E
Sbjct: 632 PKLEHYA-----CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAE 686
Query: 371 E-AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ A+ IF P+ N + V+ + AE+ EE KL +M+
Sbjct: 687 KVAEHIFELEPD-NTRYYVVLANVYAEAEKWEEVKKLRKRMQ 727
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
TH + NA I+ + G A + K S + ++ +Y S++ G+
Sbjct: 57 THSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGK 114
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++H+ ++ + E ++ L+ Y CG LVQ R++FDK+ + WN ++S Y
Sbjct: 115 RVHSVIISNGISVDE----ALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170
Query: 364 INARRLEEAKFIFREVPE----RNLLTWTVMISGLAESG 398
E+ +F+++ + N T+T ++ A G
Sbjct: 171 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 209
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R IH HIL G+ + L+D+Y K + A LFD P D+ S T +++ Y
Sbjct: 516 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGM 575
Query: 84 AGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPF 140
G A FN + D S++A++ A SH+ + K F M+ + G P
Sbjct: 576 HGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLE 635
Query: 141 SFSTVL 146
++ V+
Sbjct: 636 HYACVV 641
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 162/347 (46%), Gaps = 45/347 (12%)
Query: 73 SRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR 132
++ SA S GN+ A LF + + + + N M++A+SH+ A+ ++ +M
Sbjct: 42 TKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLI 101
Query: 133 DGFAPDPFSFSTVLGAMSL---IAEEEWHCQ------------QLHCDVVKWGVMCVPSV 177
+ D ++ + VL A S + +E C ++HC V+K G PSV
Sbjct: 102 NNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSV 161
Query: 178 LNTLLSCYICCA-------------SSTLVESPVLMA---------SARKLFDEAPLSQK 215
N+LL Y C ++LV ++++ SA L + P K
Sbjct: 162 QNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPC--K 219
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
SW T+IA Y+R D+ +AR++ M AV+WN+MI+G V Y A + F +M
Sbjct: 220 TVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQ 279
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS-VNNALITFYTK 334
+ G++ E T S++ A TG G +++ ++ EH I S + NAL+ Y K
Sbjct: 280 NAGVKPTEVTLISILGACAETGALEIGHKIY-----ESLKVCEHKIESYLGNALVNMYCK 334
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
CG L A E+F+ M ++ + WNA++ G EE +F E+ E
Sbjct: 335 CGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEE 381
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 181/401 (45%), Gaps = 44/401 (10%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH ++ GF+ P ++N L+ Y + + A HLFD+ + + S ++SAY +
Sbjct: 146 IHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVND 205
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM-KRDGFAPDPF----- 140
+ A+ L P + +S+N ++ Y D AA ++F M +R+ + +
Sbjct: 206 YESADYLLELMPC--KTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCV 263
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
S GA+ L +E + GV P+ + TL+S CA + +E
Sbjct: 264 SVRDYAGALELFSEMQ-----------NAGVK--PTEV-TLISILGACAETGALE----- 304
Query: 201 ASARKLFDEAPLSQKDEPSW--TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
K+++ + + S+ ++ Y + +L+ A ++ +GM WNAM+ G
Sbjct: 305 -IGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGL 363
Query: 259 VRHGLYEEAFDTFRKM-HSMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TV 313
HG EE F F +M S+G I+ D T+ ++ A + GL + R ++++ +
Sbjct: 364 AVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKI 423
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILSGYINARRLEEA 372
V S+H+ ++ ++ G L +A ++ P ++ +V W +L E A
Sbjct: 424 VPDSKHY-----GCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELA 478
Query: 373 KFIFREVPERNLLT---WTVMISGLAESGFGEESLKLFNQM 410
+ F+++ + L + ++ + AE+G +E +L ++M
Sbjct: 479 EISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEM 519
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 35/145 (24%)
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK---------- 347
++N G ++H V++ Q SV N+L+ FY++CG + AR +FD+
Sbjct: 139 VYNKGTEIHCRVIKIGFQNDP----SVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWN 194
Query: 348 ---------------------MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLT 386
MP + +VSWN +++ YI ++ A+ +F +PERN ++
Sbjct: 195 IMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVS 254
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
W MI+G +L+LF++M+
Sbjct: 255 WNSMIAGCVSVRDYAGALELFSEMQ 279
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 181/396 (45%), Gaps = 39/396 (9%)
Query: 24 ARAIHAHILTTGFRLT--PLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ +HA + GF ++ + ++++Y K ++ A + + D FS + L+S Y
Sbjct: 148 GKQVHARVFIDGFEFKHDKVLCSSIVNLYGKCGDLDIAVWVVGFVMDVDDFSLSALVSGY 207
Query: 82 SAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
+ AG + A ++F+ P + + +N+++ Y N + A+ LF +M+R G +
Sbjct: 208 ANAGRMSDARRVFDNKVDPCS----VLWNSIISGYVSNGEEMEALDLFNQMRRSGVRGEF 263
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+ + +L A S + E +Q+H K G V +TLL Y C S
Sbjct: 264 PAVANILSAASSLLNFEL-VKQMHDHAFKIGATHDIVVASTLLDAYSKCQHSH------- 315
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
A +LFDE L D TMI Y + A+ + M + ++WN+++
Sbjct: 316 --EACELFDE--LKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSIL---- 367
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
A DTF +M+ + ++MD++++ S+ISA G Q+ + T+ S+
Sbjct: 368 -------ALDTFSRMNMLDVKMDKFSFASVISACAIKSSLELGEQVFGKAI-TLGLESDQ 419
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
I + +L+ FY KCG + R+VFD M D VSWN +L GY EA +F E+
Sbjct: 420 IIYT---SLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYATNGYGIEALTLFNEM 476
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ +T+ ++S G EE LF MK
Sbjct: 477 EYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMK 512
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 64/359 (17%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N+L+ + KS ++ AH+LF+ P +++
Sbjct: 64 NQLVSTFSKSGDLQQAHNLFNAMP---------------------------------MKN 90
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP---DPFSFSTVLGAMSLIAEEEWHCQ 160
+ +N+M+ YS + A+ LF M D D F STV GA + + + +
Sbjct: 91 PLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHRDAFVLSTVFGACADLFVLDCG-K 149
Query: 161 QLHCDVVKWG-------VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS 213
Q+H V G V+C +++++ Y C + V +
Sbjct: 150 QVHARVFIDGFEFKHDKVLC-----SSIVNLYGKCGDLDIAVWVV-----------GFVM 193
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
D+ S + +++GY ++ AR++ D P +V WN++ISGYV +G EA D F +
Sbjct: 194 DVDDFSLSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQ 253
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
M G++ + +++SA+ + F +Q+H + + + H I+ V + L+ Y+
Sbjct: 254 MRRSGVRGEFPAVANILSAASSLLNFELVKQMHDHAFKI---GATHDIV-VASTLLDAYS 309
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 392
KC +A E+FD++ V D + N +++ Y N R+E+AK IF+ +P + L++W +++
Sbjct: 310 KCQHSHEACELFDELKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILA 368
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 20/232 (8%)
Query: 191 STLVESPVLMASARK---LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+TL+E+ + ++ +K LF P K SW +++ + ++ DL A L + M
Sbjct: 33 NTLIEAHINLSHRKKSLELFHAMP--HKSHYSWNQLVSTFSKSGDLQQAHNLFNAMPMKN 90
Query: 248 AVAWNAMISGYVRHG-------LYEEA-FDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
+ WN+MI GY RHG L++E FD MH D + +++ A + +
Sbjct: 91 PLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHR-----DAFVLSTVFGACADLFVL 145
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
+CG+Q+HA V + +L ++++ Y KCG L A V + D S +A+
Sbjct: 146 DCGKQVHARVFIDGFEFKHDKVLC--SSIVNLYGKCGDLDIAVWVVGFVMDVDDFSLSAL 203
Query: 360 LSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+SGY NA R+ +A+ +F + + W +ISG +G E+L LFNQM+
Sbjct: 204 VSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMR 255
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 69/334 (20%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H H G ++ + L+D Y K + A LFD+ D T+++ Y
Sbjct: 281 LVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHSHEACELFDELKVYDAILLNTMITVYC 340
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G ++ A+ +F P + IS+N+++ A+ F RM D FSF
Sbjct: 341 NCGRIEDAKGIFQTMPN--KTLISWNSIL-----------ALDTFSRMNMLDVKMDKFSF 387
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++V+ A C S+L +
Sbjct: 388 ASVISA--------------------------------------CAIKSSLELGEQVFGK 409
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A L E+ D+ +T+++ Y + + RK+ DGM V+WN M+ GY +G
Sbjct: 410 AITLGLES-----DQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYATNG 464
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-----HAYVLRTVVQPS 317
EA F +M G++ T+ ++SA + GL GR L H Y + +
Sbjct: 465 YGIEALTLFNEMEYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMKHEYDINPGI--- 521
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
EH+ + ++ + + G +A V ++MP +
Sbjct: 522 EHY-----SCMVDLFARAGCFGEAMYVIEEMPFQ 550
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 335 CGKLVQAREV--FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 392
C L +AR++ FD+MP + SWN ++ +IN +++ +F +P ++ +W ++S
Sbjct: 9 CRTLCEARQLQLFDEMPQPNPFSWNTLIEAHINLSHRKKSLELFHAMPHKSHYSWNQLVS 68
Query: 393 GLAESGFGEESLKLFNQM 410
++SG +++ LFN M
Sbjct: 69 TFSKSGDLQQAHNLFNAM 86
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 60/348 (17%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F TTL+ Y G + A K+FN +T R+ +S+ AMV Y D A K+F
Sbjct: 147 DQDLFMGTTLIDMYGKCGQISDARKVFN--ELTERNVVSWTAMVVGYVTAGDVVKAKKVF 204
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
DG P +V W N ++ ++
Sbjct: 205 -----DGM---PLR-----------------------NVASW---------NAMIRGFVK 224
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
++SAR +FD P +K+ S+TTM+ GY + D+ S+R L +
Sbjct: 225 VGD---------LSSARGVFDSMP--EKNVVSFTTMVDGYAKAGDMESSRFLFEQAAEKD 273
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V W+A+ISGYV++G EA F +M SM + DE+ L+SA+ G +++ +
Sbjct: 274 VVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDS 333
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
YV + + ++S AL+ KCG + +A ++F +MP RDLVS+ +++ G+
Sbjct: 334 YVGNNSIDLQKDHVIS---ALVDMNAKCGNMERALKLFQEMPERDLVSYCSMIHGFSIHG 390
Query: 368 RLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
E+A +F + ++ +T++++ + SG ++ K FN M+
Sbjct: 391 HGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSME 438
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 64/347 (18%)
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
T +N ++ + + + F+RMK +G PD +++ +V+ A S + + +H
Sbjct: 80 TFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKV-LVGKSVH 138
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
V + G+ + TL+ Y C ++ ARK+F+E L++++ SWT M
Sbjct: 139 GSVFRCGLDQDLFMGTTLIDMYGKCGQ---------ISDARKVFNE--LTERNVVSWTAM 187
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
+ GYV D+ A+K+ DGM +WNAMI G+V+ G A F M +
Sbjct: 188 VVGYVTAGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNV---- 243
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
++T+++ G R L Q +E +++ +ALI+ Y + G+ +A +
Sbjct: 244 VSFTTMVDGYAKAGDMESSRFLFE-------QAAEKDVVTW-SALISGYVQNGEANEALK 295
Query: 344 VFDKMPVRDLVSWNAILSGYINAR------------------------------------ 367
VF +M +++ +L G ++A
Sbjct: 296 VFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMN 355
Query: 368 ----RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+E A +F+E+PER+L+++ MI G + G GE+++ LFN+M
Sbjct: 356 AKCGNMERALKLFQEMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRM 402
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
+P WN I + + + + F +M + G D YTY S+I A T G+
Sbjct: 77 NPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKS 136
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H V R + L + LI Y KCG++ AR+VF+++ R++VSW A++ GY+
Sbjct: 137 VHGSVFRCGLDQD----LFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYV 192
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
A + +AK +F +P RN+ +W MI G + G + +F+ M
Sbjct: 193 TAGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSM 238
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 56/342 (16%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-G 134
++++ Y G +A K+F+ +T +D +S+N+++ Y+ AV++F R++ + G
Sbjct: 157 SMVTMYFRCGENGVARKVFD--EITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESG 214
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
F PD S +VLGA + + E + + VV+ G+ + + L+S Y C
Sbjct: 215 FEPDEMSLVSVLGACGELGDLELG-RWVEGFVVERGMKVNSYIGSALISMYSKCG----- 268
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+L S+R++ DGM + WNA
Sbjct: 269 -------------------------------------ELVSSRRIFDGMPSRDFITWNAA 291
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
IS Y ++G+ +EA F M G+ ++ T T+++SA + G + G+Q+ Y +
Sbjct: 292 ISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGL 351
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
Q H I V ALI Y KCG L A+ VF+ MP ++ SWNA++S + + +EA
Sbjct: 352 Q---HDIF-VATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALS 407
Query: 375 IFREVPER------NLLTWTVMISGLAESGFGEESLKLFNQM 410
+F + + N +T+ ++S +G +E +LF+ M
Sbjct: 408 LFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMM 449
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
D + +M+ Y R + ARK+ D +T V+WN+++SGY + G EA + F +
Sbjct: 149 DNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGR 208
Query: 274 M-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
+ G + DE + S++ A G GR + +V+ ++ + + + +ALI+ Y
Sbjct: 209 LREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY----IGSALISMY 264
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWT 388
+KCG+LV +R +FD MP RD ++WNA +S Y +EA +F + E N +T T
Sbjct: 265 SKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLT 324
Query: 389 VMISGLAESGFGEESLKLFNQM 410
++S A G +L L QM
Sbjct: 325 AVLSACASIG----ALDLGKQM 342
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 54/281 (19%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+ L+S YS G + + ++F+ P RD I++NA + AY+ N A+ LF MK +G
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPS--RDFITWNAAISAYAQNGMADEAISLFHSMKENG 315
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ + + VL A + I + +Q+ G+ V L+ Y C S
Sbjct: 316 VDPNKVTLTAVLSACASIGALDLG-KQMDEYATHRGLQHDIFVATALIDMYAKCGS---- 370
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ SA+++F++ P +K++ SW NAM
Sbjct: 371 -----LESAQRVFNDMP--RKNDASW-------------------------------NAM 392
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYV--L 310
IS HG +EA F +M G + ++ T+ SL+SA + GL + G +L + L
Sbjct: 393 ISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTL 452
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+V EH+ + ++ ++ G L +A +V +KMP +
Sbjct: 453 FGLVPKIEHY-----SCMVDLLSRAGHLYEAWDVIEKMPEK 488
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 203/464 (43%), Gaps = 88/464 (18%)
Query: 15 NHPSATQTLARAIHAHILTTGFRLTPLIR------NRLIDIYCKSSNIPYAHHLFDKTPN 68
++ SA R H F TPL + N ++ Y +S A LFD+ P
Sbjct: 21 SNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQ 80
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
+ S ++S Y G V A K+F+ P R+ +S+ +MV+ Y A KLF
Sbjct: 81 RNTVSFNGMISGYVKNGMVADARKVFDVMPE--RNVVSWTSMVRGYVQEGMVEEAEKLFW 138
Query: 129 RMKRDGFAPDPFSFSTVLGAM-------------SLIAEEE---------WHCQQLHCDV 166
M R + S++ ++G + +I E++ +CQ D
Sbjct: 139 EMPRR----NVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDE 194
Query: 167 VK--WGVMCVPSVLN--TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
+ + M V +V T++S Y A + V+ ARKLF+ P +++E SWT
Sbjct: 195 ARELFDEMKVRNVFTWTTMVSGY---AKNGRVDV------ARKLFEVMP--ERNEVSWTA 243
Query: 223 MIAGYVRND-------------------------------DLASARKLLDGMTHPIAVAW 251
M+ GY ++ ++ AR + +GM W
Sbjct: 244 MLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTW 303
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
NAMI + R GL EA F +M G+ ++ + S++S + + GRQ+HA ++R
Sbjct: 304 NAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVR 363
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ L V + LIT Y KCG LV+A+ +F++ +D+V WN++++GY EE
Sbjct: 364 SEFDQD----LYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEE 419
Query: 372 AKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
A +F ++ + +T+ ++S + SG +E ++F MK
Sbjct: 420 ALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 162/359 (45%), Gaps = 47/359 (13%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
+I YC+ + A LFD+ ++F+ TT++S Y+ G V +A KLF P R+ +
Sbjct: 182 MIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPE--RNEV 239
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMK------------RDGFAPDPFSFSTVLGAMSLIA 153
S+ AM+ Y+ + A +LF M + G A + + M
Sbjct: 240 SWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERD 299
Query: 154 EEEWHC-----QQLHCDVVKWGVMC----------VPSVLNTLLSCYICCASSTLVESPV 198
E W+ ++ D+ G+ PS+++ L +C + ++L
Sbjct: 300 EGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVL---SVCASLASLDHGRQ 356
Query: 199 LMAS-ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
+ A R FD+ D + +I YV+ DL A+ + + V WN+MI+G
Sbjct: 357 VHARLVRSEFDQ------DLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITG 410
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQP 316
Y +HGL EEA + F M S G+Q DE T+ ++SA +G G ++ A V+P
Sbjct: 411 YSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEP 470
Query: 317 S-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAK 373
EH+ ++ + G++ +A E+ +KMP+ D + W A+L N +L+ A+
Sbjct: 471 GIEHYA-----CMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAE 524
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 24/349 (6%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F L+ Y+ + A K+F+ ++ RD +S+N+++ Y + +F
Sbjct: 108 DSDLFVSNALIHGYAGFCELGFARKVFD--EMSERDLVSWNSLICGYGRCRRYSEVLVVF 165
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL-NTLLSCYI 186
M+ D + V+ A +++ E W + ++ + V L NTL+ Y
Sbjct: 166 EEMRMADVKGDAVTMVKVVLACTVLGE--WGVVDAMIEYIEENKVEVDVYLGNTLIDMY- 222
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
++V+ AR++FD + ++ SW MI GY + +L +ARKL D M H
Sbjct: 223 --GRRSMVDL------ARRVFDR--MRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHR 272
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
++W +MIS Y + G + +A F++M ++ DE T S++SA + G + G +H
Sbjct: 273 DVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVH 332
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
Y+ + V + V NALI Y KCG + + VF++M RD VSW ++++G
Sbjct: 333 EYIRKYDVNAD----IYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVN 388
Query: 367 RRLEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ A +F RE T+ ++ A +G ++ L+ F M+
Sbjct: 389 GSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESME 437
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 26/264 (9%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N LID+Y + S + A +FD+ + ++ S ++ Y AGN+ A KLF+ P RD
Sbjct: 216 NTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP--HRD 273
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
IS+ +M+ +YS AV+LF M PD + ++VL A + I + + +H
Sbjct: 274 VISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVG-EAVH 332
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+ K+ V V N L+ Y C + + +F+E + ++D SWT++
Sbjct: 333 EYIRKYDVNADIYVGNALIDMYCKCGA---------VEKGLSVFEE--MGKRDSVSWTSV 381
Query: 224 IAGYVRNDDLASARKLLDGM-------THP--IAVAWNAMISGYVRHGLYEEAFDTFRKM 274
IAG N SA L M TH + V +G V GL E F++ ++
Sbjct: 382 IAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGL--EYFESMERV 439
Query: 275 HSMGIQMDEY-TYTSLISASFNTG 297
+ + +M Y L+S S N G
Sbjct: 440 YGLTPEMKHYGCVVDLLSRSGNLG 463
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
++ A +L + P WN MI G+ + EA + M+S + + TY L+
Sbjct: 26 NILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLK 85
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A +C +HA VL+ L V+NALI Y +L AR+VFD+M R
Sbjct: 86 ACARISNVSC-TTVHARVLKLGFDSD----LFVSNALIHGYAGFCELGFARKVFDEMSER 140
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREV 379
DLVSWN+++ GY RR E +F E+
Sbjct: 141 DLVSWNSLICGYGRCRRYSEVLVVFEEM 168
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 193/441 (43%), Gaps = 72/441 (16%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSS----NIPY 58
+++ + L+ L++ + T + IH H+ TG P +L+ + C S + Y
Sbjct: 5 NKSCEEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLL-LNCAVSISDHVLNY 63
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
+ LF PNPD F YN ++++ SH+
Sbjct: 64 SLRLFHHFPNPDTF---------------------------------MYNTLIRSLSHSS 90
Query: 119 DGHAAVKLFVRMKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
++++ F+++ R PD FSF+ L ++ + QLH + G V
Sbjct: 91 TPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFV 150
Query: 178 LNTLLSCYICCAS--------------STLVESPVLMASAR--------KLFDEAPLSQK 215
TL+S Y C + + + V+ A R LF+ P+ +
Sbjct: 151 GTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPV--R 208
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ SW TM+AGYV+ L AR++ M +W+ MI G+ + G + +AF F+++
Sbjct: 209 NLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELL 268
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+ E + T ++SA G F G+ LH ++ + I+SVNNALI Y+KC
Sbjct: 269 RDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLC----IVSVNNALIDTYSKC 324
Query: 336 GKLVQAREVFDKMPVRD-LVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVM 390
G + A+ VF M +VSW ++++ R +EA +F E+ E + +T+ +
Sbjct: 325 GNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISL 384
Query: 391 ISGLAESGFGEESLKLFNQMK 411
+ + SG E+ LF++M+
Sbjct: 385 LYACSHSGLVEQGCALFSKMR 405
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 144/369 (39%), Gaps = 83/369 (22%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI--------------- 71
+H+H GF + LI +Y + YA +FD+ P++
Sbjct: 135 LHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGD 194
Query: 72 -------FSR---------TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
F R T+L+ Y AG + LA ++F + +RD S++ M+ ++
Sbjct: 195 VEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVF--CEMKMRDDASWSTMIVGFA 252
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
+ H A F + RD P S + VL A + E+ + LH + K G +C+
Sbjct: 253 KSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFG-KILHGFMEKAGFLCIV 311
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
SV N L+ Y C + + + SA K
Sbjct: 312 SVNNALIDTYSKCGNVDMAKLVFQHMSAEKCI---------------------------- 343
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
V+W +MI+ HG +EA F +M G++ D T+ SL+ A +
Sbjct: 344 -------------VSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSH 390
Query: 296 TGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-D 352
+GL G L + + ++P+ EH+ ++ Y + +L +A E +MP+ +
Sbjct: 391 SGLVEQGCALFSKMRNFYGIEPAIEHY-----GCMVDLYGRAARLQKAYEFIRQMPILPN 445
Query: 353 LVSWNAILS 361
++ W +L
Sbjct: 446 VIIWRTLLG 454
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 53/347 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F LL Y+ +G + A++LF P T D I ++ M+ Y+ + A+ LF
Sbjct: 269 DHDLFVGIALLELYAKSGEIIDAQRLFEEMPKT--DLIPWSLMIARYAQSDRSKEALDLF 326
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+RM++ P+ F+F++VL A + + +Q+H V+K+G+ V N ++ Y
Sbjct: 327 LRMRQTSVVPNNFTFASVLQACASSVSLDLG-KQIHSCVLKFGLNSNVFVSNAIMDVYAK 385
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + ++ KLF+E P RND
Sbjct: 386 CGE---------IENSMKLFEELP----------------DRND---------------- 404
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V WN +I GYV+ G E A + F M +Q E TY+S++ AS + G Q+H+
Sbjct: 405 -VTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++T+ V N+LI Y KCG++ AR FDKM RD VSWNA++ GY
Sbjct: 464 LTIKTMYNKDT----VVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHG 519
Query: 368 RLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
EA +F + N LT+ ++S + +G + F M
Sbjct: 520 MSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESM 566
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 155/351 (44%), Gaps = 51/351 (14%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ + + D+F++ LL+ Y + +++ A KLF+ P T +TIS+ + + YS +
Sbjct: 60 HILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQT--NTISFVTLAQGYSRDHQF 117
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLHCDVVKWGVMCVPSVLN 179
H A+ +R+ ++G +PF F+T+L L++ + H C LH V K G
Sbjct: 118 HQALHFILRIFKEGHEVNPFVFTTLLKL--LVSMDLAHLCWTLHACVYKLG--------- 166
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
D T +I Y ++ AR +
Sbjct: 167 ---------------------------------HHADAFVGTALIDAYSVRGNVDVARHV 193
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D + V+W M++ Y + YEE+ F +M MG + + +T + + + F
Sbjct: 194 FDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAF 253
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
N G+ +H L+ L V AL+ Y K G+++ A+ +F++MP DL+ W+ +
Sbjct: 254 NVGKSVHGCALKGCYDHD----LFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLM 309
Query: 360 LSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
++ Y + R +EA +F + + +++ + + ++ SL L Q+
Sbjct: 310 IARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 53/317 (16%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N ++F ++ Y+ G ++ + KLF P R+ +++N ++ Y DG A+ LF
Sbjct: 370 NSNVFVSNAIMDVYAKCGEIENSMKLFEELPD--RNDVTWNTIIVGYVQLGDGERAMNLF 427
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M P ++S+VL A + +A E Q+H +K V N+L+ Y
Sbjct: 428 THMLEHDMQPTEVTYSSVLRASASLAALE-PGLQIHSLTIKTMYNKDTVVANSLIDMYAK 486
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + AR FD+ ++++DE SW MI G
Sbjct: 487 CGR---------INDARLTFDK--MNKRDEVSWNAMICG--------------------- 514
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR-QLH 306
Y HG+ EA + F M + ++ T+ ++SA N GL G+
Sbjct: 515 ----------YSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFE 564
Query: 307 AYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYI 364
+ ++P EH+ ++ + G+ +A ++ ++ + ++ W A+L +
Sbjct: 565 SMSKDYDIKPCIEHY-----TCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACV 619
Query: 365 NARRLEEAKFIFREVPE 381
++++ + + V E
Sbjct: 620 IHKKVDLGRVCAQHVLE 636
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
YV+++ L A KL D M +++ + GY R + +A ++ G +++ + +
Sbjct: 80 YVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVF 139
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
T+L+ + L + LHA V + H V ALI Y+ G + AR VFD
Sbjct: 140 TTLLKLLVSMDLAHLCWTLHACVYKL----GHHADAFVGTALIDAYSVRGNVDVARHVFD 195
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
+ +D +++WT M++ AE+ F EESL+L
Sbjct: 196 DICCKD-------------------------------MVSWTGMVACYAENCFYEESLQL 224
Query: 407 FNQMK 411
FNQM+
Sbjct: 225 FNQMR 229
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 177/447 (39%), Gaps = 117/447 (26%)
Query: 16 HPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRT 75
H + IHA ++ P I +LI Y ++N+ A ++F++ P+P++
Sbjct: 30 HKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYN 89
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
L+ AYS +GN N++ A + ++M DG
Sbjct: 90 YLIRAYSLSGN-------------------ESNSL-----------CAFGVLLKMHVDGV 119
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS----- 190
D F++ +L + + + +H V K G V N+L+ CY C
Sbjct: 120 LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179
Query: 191 ---STLVESPVL--------------MASARKLFDEAP---------------------- 211
S + E V+ + A K+FDE P
Sbjct: 180 KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDK 239
Query: 212 -------LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
++++D SW+TM+ GY +N D+ AR L D V W +ISGY G
Sbjct: 240 AFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQV 299
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
+EA + +M G+++D+ + S+++A +G+ G+++H LR+ + S V
Sbjct: 300 KEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCST----KV 355
Query: 325 NNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
N+ I Y KCG + A VF+ M +DLVSWN+
Sbjct: 356 LNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNS------------------------- 390
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQM 410
MI G G GE+S++LFN M
Sbjct: 391 ------MIHGFGIHGHGEKSIELFNTM 411
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 168/413 (40%), Gaps = 62/413 (15%)
Query: 9 LFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN 68
L N S+ +L + +HAH+ GF + N LID YC+ ++ A +F
Sbjct: 128 FLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEE 187
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
D+ S +++ G++ A K+F+ P RD +S+N M+ ++ + A KLF
Sbjct: 188 RDVVSWNSMVGGLVKNGDLDGALKVFDEMPE--RDRVSWNTMLDGFTKAGEMDKAFKLFE 245
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDV---VKWGVMC--------VPS 176
RM D S+ST++ S + + C V V W + V
Sbjct: 246 RMAE----RDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKE 301
Query: 177 VLNT---------------LLSCYICCASSTLVESPVLMASARKLFDEAPLSQ--KDEPS 219
+N +S CA S + + +K+ D S+
Sbjct: 302 AMNLCDEMEKSGLRLDDGFFISILAACAESGM------LGLGKKMHDSFLRSRFRCSTKV 355
Query: 220 WTTMIAGYVRNDDLASARKLLDGM-THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
+ I Y + + A ++ +GM T V+WN+MI G+ HG E++ + F M G
Sbjct: 356 LNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREG 415
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCG 336
+ D YT+ L+ A + GL N GR + R +V EH+ ++ + G
Sbjct: 416 FKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHY-----GCMVDLLGRGG 470
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSG-YINARRLEE--------AKFIFREVP 380
L +A + MP NAI+ G + A R+ +K++F+ VP
Sbjct: 471 HLKEAFWLVRSMPFEP----NAIILGTLLGACRMHNDVKLATSVSKYLFKLVP 519
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 178/418 (42%), Gaps = 93/418 (22%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
+T+ NLF NH S L + IHA I TGF ++ ++I S N+ YA ++
Sbjct: 12 EQTLMNLF----NHCSTLNHL-KQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNV 66
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FDK P PD F T++ + N+T +SHN
Sbjct: 67 FDKIPKPDSFLWNTMIRGFG------------NST---------------THSHN----- 94
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A+ F RM+ PD F+FS +L ++ + +QLHC + K+G V N+L+
Sbjct: 95 AIHFFKRMQL-AHRPDNFTFSFILKIIARLRFVNL-GKQLHCSLFKFGFENHTYVRNSLI 152
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
Y G ++ D+ A +L +
Sbjct: 153 HMY----------------------------------------GMLK--DIEIAHQLFEE 170
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-----HSMGIQMDEYTYTSLISASFNTG 297
M P V+WN++I +V G Y EA D F KM + M +Q D T +SA G
Sbjct: 171 MYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIG 230
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
+ GR++H++V V E +SV NAL+ Y KCG + +A E F M +++VSWN
Sbjct: 231 SLDFGRKVHSFVRDGVNSFGES--ISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWN 288
Query: 358 AILSGYINARRLEEAKFIFREVPERNL-----LTWTVMISGLAESGFGEESLKLFNQM 410
++ G+ + EEA +F + N+ +T+ ++ + G +E + F M
Sbjct: 289 VMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIM 346
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 182/371 (49%), Gaps = 46/371 (12%)
Query: 56 IPYAHHLFDKT----PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
+PY L ++ + D+F T +++AY+ G V A K+F+ + R+ +++NAM+
Sbjct: 67 LPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDL--MHERNDVTWNAMI 124
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM-----SLIAEEEWHCQQLHC-D 165
Y N D +A+ F M S+S ++G +L A + + D
Sbjct: 125 GGYLRNGDAKSALLAFEEMP----GKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKD 180
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
VV W +M + Y M AR++F+ P +++ W++M+
Sbjct: 181 VVIWTMM---------VDGY---------AKKGEMEDAREVFELMP--ERNYFVWSSMVC 220
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 285
GY + D+ A + + WN+MI+GYV++G E+A + F +M G + DE+T
Sbjct: 221 GYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFT 280
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
S++SA G + G+Q+H +++ F+LS LI Y KCG LV AR VF
Sbjct: 281 VVSVLSACAQLGDLDAGKQMH-HMIECKGIAVNQFVLS---GLIDMYAKCGDLVNARLVF 336
Query: 346 DKMPVRDLVSWNAILSGY-INARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFG 400
+ R++ WNA+++G+ +N + E +++ R + E N+ +T+ ++S A G
Sbjct: 337 ESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDR-MEESNIRPDAVTFITVLSACAHGGLV 395
Query: 401 EESLKLFNQMK 411
E+L++ ++M+
Sbjct: 396 SEALEVISKME 406
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 25/284 (8%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT 100
+I ++D Y K + A +F+ P + F ++++ Y G+V AE +F PV
Sbjct: 182 VIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPV- 240
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ 160
R+ +N+M+ Y N G A++ F M DGF PD F+ +VL A + + + + +
Sbjct: 241 -RNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLD-AGK 298
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
Q+H + G+ VL+ L+ Y C + +AR +F+ ++++ W
Sbjct: 299 QMHHMIECKGIAVNQFVLSGLIDMYAKCGD---------LVNARLVFESC--NERNVFCW 347
Query: 221 TTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
MIAG+ N + LD M P AV + ++S GL EA + KM
Sbjct: 348 NAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEE 407
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL--RTVVQPSE 318
GI+M Y ++ L GR AY L R ++P+E
Sbjct: 408 YGIEMGIRHYGCMVDL-----LGRAGRLKEAYELIKRMPMKPNE 446
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 180/395 (45%), Gaps = 57/395 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYA---HHLFDKTPNP-DIFSRTTLLS 79
A A+ ++T+G +L + + KS ++ Y H + P D++ ++ L+
Sbjct: 363 AVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVD 422
Query: 80 AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
Y G+V++A K F TL D AM+ Y N A+ LF + ++G P+
Sbjct: 423 IYFKGGDVEMACKTFQQN--TLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNC 480
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+ ++VL A + +A + ++LHCD++K G+ V V +++
Sbjct: 481 LTMASVLPACAALASLKLG-KELHCDILKKGLENVCQVGSSI------------------ 521
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
T M Y ++ L A + M +V WN MI +
Sbjct: 522 ---------------------TYM---YAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFS 557
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++G E A D FR+M + G + D + ++ +SA N G++LH +V+R S+
Sbjct: 558 QNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSF-ISDT 616
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
F+ S LI Y+KCGKL AR VFD M ++ VSWN+I++ Y N R E +F E+
Sbjct: 617 FVAS---TLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEM 673
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
E + +T+ V++S +G +E + F M
Sbjct: 674 VEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCM 708
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 49/341 (14%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F ++L+ Y+ G + A+ LF+ PV RD I +N M+ Y N D ++A+ F
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPV--RDCILWNVMLNGYVKNGDFNSALGTFQE 268
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ P+ SF +L + QLH V++ G P+V NT+++ Y C
Sbjct: 269 MRNSCVKPNSVSFVCLLSVCATRGIVRAGI-QLHGLVIRSGFESDPTVANTIITMYSKCG 327
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ + ARK+FD P Q D +W +IAGYV+N
Sbjct: 328 N---------LFDARKIFDIMP--QTDTVTWNGLIAGYVQN------------------- 357
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
G +EA F+ M + G+++D T+ S + + +G +++H+Y+
Sbjct: 358 ------------GFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYI 405
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R V F + + +AL+ Y K G + A + F + + D+ A++SGY+
Sbjct: 406 VRHGVP----FDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLN 461
Query: 370 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
EA +FR + + ++ + ++ + + SLKL ++
Sbjct: 462 VEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKEL 502
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 64/341 (18%)
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y+ +G + LA + F PV +D++ +N M+ ++S N A+ LF +M G D
Sbjct: 525 YAKSGRLDLAYQFFRRMPV--KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSV 582
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
S S L A + ++ ++LHC VV+ N+ +S T V S
Sbjct: 583 SLSATLSACANYPAL-YYGKELHCFVVR----------NSFIS-------DTFVAS---- 620
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
T+I Y + LA AR + D M V+WN++I+ Y
Sbjct: 621 ---------------------TLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGN 659
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP---- 316
HG E D F +M GIQ D T+ ++SA + GL + G Y R + +
Sbjct: 660 HGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEG----IYYFRCMTEEYGIC 715
Query: 317 --SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAK 373
EHF ++ Y + G+L +A + MP D +W ++L +E AK
Sbjct: 716 ARMEHFA-----CMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAK 770
Query: 374 FIFREVPER--NLLTWTVMISGL-AESGFGEESLKLFNQMK 411
+ + E N + V++S + A +G E LK+ + MK
Sbjct: 771 LASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMK 811
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+ M+ YV L + ++ WN +I G+ G ++ A F +M +
Sbjct: 115 SRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVA 174
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE----HFILSVNNALITFYTKCG 336
D+YT+ +I A CG + + + V + + H L + ++LI YT G
Sbjct: 175 PDKYTFPYVIKA--------CGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNG 226
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMIS 392
+ A+ +FD++PVRD + WN +L+GY+ A F+E+ N +++ ++S
Sbjct: 227 YIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLS 286
Query: 393 GLAESGFGEESLKL 406
A G ++L
Sbjct: 287 VCATRGIVRAGIQL 300
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 164/349 (46%), Gaps = 55/349 (15%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF- 127
PD F T L++ Y+ + ++ A +F+ P +++ S+N+M+ AY+ + A+ LF
Sbjct: 82 PDNFIATKLITFYAKSNLIRNARNVFDKIP--HKNSFSWNSMIIAYTSKSLFNDALSLFA 139
Query: 128 --VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLHCDVVKWGVMCVPSVLNTLLSC 184
V + +PD F+ +++L ++L + + +Q+HC + G VLN L++C
Sbjct: 140 SFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTC 199
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
Y C + ARK+ D MT
Sbjct: 200 YCRCGRIEI------------------------------------------ARKVFDEMT 217
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM---GIQMDEYTYTSLISASFNTGLFNC 301
V WNAMI GY + G YEE + +M + GI + T S++ A + +
Sbjct: 218 ERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSF 277
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G ++H ++ ++ ++ F+ NA+I Y KCG L ARE+FD+M +D VS+ +I+S
Sbjct: 278 GMEVHRFMKDDGIE-TDVFLC---NAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIIS 333
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
GY+ ++EA + + + L TW +I G+ ++ E +L L +M
Sbjct: 334 GYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREM 382
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 173/351 (49%), Gaps = 29/351 (8%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ L++ Y G +++A K+F+ +T RD +++NAM+ YS + +L++
Sbjct: 189 DVCVLNALVTCYCRCGRIEIARKVFD--EMTERDIVTWNAMIGGYSQSGFYEECKRLYLE 246
Query: 130 M---KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
M + G P+ + +V+ A + + ++H + G+ + N +++ Y
Sbjct: 247 MLGLEGKGILPNAVTIGSVMQACGQSKDLSFG-MEVHRFMKDDGIETDVFLCNAIIAMYA 305
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
C S + AR+LFDE + +KDE S+ ++I+GY+ N + A +L G+ +P
Sbjct: 306 KCGS---------LNYARELFDE--MGEKDEVSYRSIISGYMINGFVDEALDVLKGIENP 354
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM--DEYTYTSLISA-SFNTGLFNCGR 303
WN +I G V++ +E A D R+M G+ + + T +S+I S+ + L +
Sbjct: 355 GLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGL-K 413
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++H Y +R + + V A++ Y K G + AR VFD+ R L+ W +I+ Y
Sbjct: 414 EVHGYAIRRSYDQN----IYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAY 469
Query: 364 INARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ A ++ ++ +R + +T T +++ A SG E+ +FN M
Sbjct: 470 ASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAM 520
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 160/357 (44%), Gaps = 29/357 (8%)
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAA 123
D D+F +++ Y+ G++ A +LF+ + +D +SY +++ Y N A
Sbjct: 287 DDGIETDVFLCNAIIAMYAKCGSLNYARELFD--EMGEKDEVSYRSIISGYMINGFVDEA 344
Query: 124 VKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV--LNTL 181
+ + ++ G + +++ V+ M + E L ++ +G+ P+V L+++
Sbjct: 345 LDVLKGIENPGLS----TWNDVIPGMVQNNQFE-RALDLVREMPGFGLNLKPNVVTLSSI 399
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ + ++ ++ V + R+ +D+ T ++ Y + + AR++ D
Sbjct: 400 IPLFSYFSNLRGLKE-VHGYAIRRSYDQNIYVA------TAIVDSYAKLGFIHLARRVFD 452
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+ W ++I Y HG A + +M GIQ D T TS+++A ++GL N
Sbjct: 453 QSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNE 512
Query: 302 GRQL-HAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNA 358
+ +A + +QP EH+ ++ ++ GKL +A + KMP W A
Sbjct: 513 AWDVFNAMPSKHGIQPVVEHYA-----CMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGA 567
Query: 359 ILSGYINARRLEEAKF----IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+L+G +E KF +F PE + +M + + +G EE+ K+ +M+
Sbjct: 568 LLNGASIYDDVEIGKFACDHLFEIEPEHT-GNYIIMANLYSRAGRWEEARKIRERME 623
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
K H G +D Y S I N L G+QLHA + P ++FI + LITFY
Sbjct: 41 KTHGGG--LDIAAYGSAIQHCTNHRLIRQGKQLHARFFPFAITP-DNFIAT---KLITFY 94
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
K + AR VFDK+P ++ SWN+++ Y + +A +F
Sbjct: 95 AKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLF 138
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 164/349 (46%), Gaps = 56/349 (16%)
Query: 70 DIFSRTTLLSAY--SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
D F+ + L S++ S GN++ A ++F++ + ++ +N +++A+ H ++ L+
Sbjct: 70 DQFATSRLFSSFALSPFGNLEHASRIFSS--LHKPNSFMWNTLIRAHQQQ-QPHISLSLY 126
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++M+R G P +F +L A S ++ HC+Q+H VVK+G+ C+ C
Sbjct: 127 IQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGL------------CFDC 174
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+ LV GY + DL AR + D +
Sbjct: 175 HVGNGLVR------------------------------GYSVSGDLVDARYVFDEIPMKN 204
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
W MI GY ++ Y EA D F +M +G + + T S++S +G G ++H
Sbjct: 205 LSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIHE 264
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++ V+ + + AL+ Y K G ++ AR++FD+MP R++V+WNA++ G +
Sbjct: 265 FMRVKGVEVG----VILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLASHG 320
Query: 368 RLEEAKFIFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+E+A +F + E N +T+ ++S +G + ++F MK
Sbjct: 321 HVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMK 369
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 128/314 (40%), Gaps = 54/314 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D L+ YS +G++ A +F+ P +++ + M+ Y+ N + A+ LF R
Sbjct: 173 DCHVGNGLVRGYSVSGDLVDARYVFDEIP--MKNLSLWTTMICGYAQNCCYNEALDLFER 230
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M GF P+ + ++VL CA
Sbjct: 231 MVVVGFEPNGATLASVLSV---------------------------------------CA 251
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S +E + F + T ++ Y +N D+ +ARKL D M V
Sbjct: 252 RSGCLE----LGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVV 307
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHA- 307
WNAMI G HG E+A F M I + + T+ ++SA + GL + GR++
Sbjct: 308 TWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCS 367
Query: 308 -YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYIN 365
V+ + EH+ ++ + GKL++A EV MP + D+V A+L+ N
Sbjct: 368 MKVVHGIEPTIEHY-----GCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKN 422
Query: 366 ARRLEEAKFIFREV 379
E A+ + +++
Sbjct: 423 NGNTEVAERVVKQI 436
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 45/340 (13%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H HI + ++ N L+D+Y K ++ A +F + P + S TL+ Y+
Sbjct: 123 LGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYA 182
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G + A KLF+ P D +S+N+++ N A ++ M G D F+F
Sbjct: 183 KQGLIDDAMKLFDKMPEP--DIVSWNSIIAGLVDNASSRA-LRFVSMMHGKGLKMDEFTF 239
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+VL A ++E +++HC ++K G SCY A + S L++
Sbjct: 240 PSVLKACGC-SDELMLGREIHCYIIKSGFES---------SCYCISALIDMYSSCKLLSE 289
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A K+FD+ Y RN ++ + L WN+M+SG+V +G
Sbjct: 290 ATKIFDQ-----------------YFRNSSVSESLAL-----------WNSMLSGHVVNG 321
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
Y EA MH G++ D YT++ ++ N + Q+H +V+ + +
Sbjct: 322 DYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELD----C 377
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
V + LI Y K G + A +F+++P +D+V+W+++++G
Sbjct: 378 VVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITG 417
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 163/347 (46%), Gaps = 56/347 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
A+++H+HI+ +GF +H IF ++S YS
Sbjct: 22 AKSLHSHIIKSGF----------------------CNH---------IFILNNMISVYSK 50
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF-APDPFSF 142
++ A +F+ P R+ +S+ MV +++ H A+ L+ M P+ F +
Sbjct: 51 CSSIIDARNMFDEMP--HRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLY 108
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S VL A L+ E + +H + + + ++N LL Y+ C S +
Sbjct: 109 SAVLKACGLVRNVELG-KMVHYHIFQAKLDVDIVLMNALLDMYVKCGS---------LRD 158
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A+++F E P K+ SW T+I GY + + A KL D M P V+WN++I+G V +
Sbjct: 159 AQRVFCEIPC--KNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA 216
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
A MH G++MDE+T+ S++ A + GR++H Y++++ + S + I
Sbjct: 217 -SSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCI- 274
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-----WNAILSGYI 364
+ALI Y+ C L +A ++FD+ VS WN++LSG++
Sbjct: 275 ---SALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHV 318
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI- 279
MI+ Y + + AR + D M H V+W M+S + EA + +M I
Sbjct: 42 NNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIE 101
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
Q +++ Y++++ A G+ +H ++ + + + + NAL+ Y KCG L
Sbjct: 102 QPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVD----IVLMNALLDMYVKCGSLR 157
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
A+ VF ++P ++ SWN ++ GY +++A +F ++PE ++++W +I+GL ++
Sbjct: 158 DAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA 216
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 153/393 (38%), Gaps = 79/393 (20%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH +I+ +GF + + LID+Y + A +FD+ S + L
Sbjct: 254 LGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLAL---- 309
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+N+M+ + N D A+ + M R G D ++F
Sbjct: 310 ------------------------WNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTF 345
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S VL + + + Q+H V+ G L C +
Sbjct: 346 SIVL-KICMNFDNLSLASQVHGFVITSGYE---------LDCVV---------------- 379
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
+ +I Y + + +A +L + + VAW+++I+G R G
Sbjct: 380 -----------------GSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFG 422
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+ AF F M +G+Q+D + + ++ A + G+Q+H+ L+ +
Sbjct: 423 SDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEG---- 478
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
V ALI Y KCG + A +F + D +SW +I+ G R EEA + ++ E
Sbjct: 479 VVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIES 538
Query: 383 ----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N +T +++ SG EE+ +FN ++
Sbjct: 539 GTKPNKITILGVLTACRHSGLVEEAWDVFNSIE 571
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 136/346 (39%), Gaps = 88/346 (25%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+LA +H ++T+G+ L ++ + LIDIY K +I A LF++ P+ D+ + ++L++
Sbjct: 359 SLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGC 418
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G+ KLA LF+ M G D F
Sbjct: 419 ARFGSDKLA---------------------------------FSLFMDMIHLGLQIDHFV 445
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
S VL A S +A + H +Q+H +K G V L+ Y C +
Sbjct: 446 ISIVLKACSSLASHQ-HGKQVHSLCLKKGYESEGVVTTALIDMYAKCGD---------IE 495
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISG 257
A LF LS+ D SWT++I G +N A LL M T P + +++
Sbjct: 496 DALSLF--GCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTA 553
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
GL EEA+D F + + N GL C
Sbjct: 554 CRHSGLVEEAWDVFNSIET------------------NHGLIPC---------------P 580
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
EH+ N ++ + G+ +A ++ +MP + D W+++L
Sbjct: 581 EHY-----NCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGA 621
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
+ LH++++++ + FIL N +I+ Y+KC ++ AR +FD+MP R++VSW ++S
Sbjct: 22 AKSLHSHIIKSGF-CNHIFIL---NNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVS 77
Query: 362 GYINARRLEEAKFIFREVPERNL 384
N+ EA ++ E+ E +
Sbjct: 78 VLTNSSMPHEALSLYNEMIESKI 100
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 192/409 (46%), Gaps = 49/409 (11%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS-AAGNVKLAEKLFNATPVTLRDT 104
++ +Y K+ I A LFDK P + ++S Y A LAE+L+ P RD
Sbjct: 12 MLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEELYREVPCEFRDP 71
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRM---KRD-----------------GFAPDPFSFST 144
+ NA++ Y + + A+++F + KRD G+A F
Sbjct: 72 VCSNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMP 131
Query: 145 VLGAMSLIAEEEWHCQQ--------LHCDVVKWGVMCVPSVLNTLL--SCYICCASSTLV 194
+S A + + ++ ++ + GV+ V S T++ C C +
Sbjct: 132 ERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGM 191
Query: 195 ESPVLMA--------SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
+ L++ +A ++F+ P +KD SWT MI +V + + +L D +
Sbjct: 192 QIHGLVSRLGFEFVDAAYEVFERMP--EKDLISWTAMIRRFVTDGRMGKPVELFDTLKEK 249
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
W +ISG+V + YEEA + +M+ G + + T +S+++AS + N G Q+H
Sbjct: 250 DDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIH 309
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
++VL+ ++ + LS+ N+LI+FY KCG + A ++F + ++VS N++++G+
Sbjct: 310 SHVLKMNLE----YDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQN 365
Query: 367 RRLEEAKFIFR----EVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
EEA +++ E E N +T+ ++S +G EE LF+ MK
Sbjct: 366 GFGEEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMK 414
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 150/342 (43%), Gaps = 70/342 (20%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+I + T +L Y+ G + A KLF+ P R T +YNAM+ Y
Sbjct: 5 NIVTWTAMLVVYAKNGQIINARKLFDKMPE--RTTATYNAMISGY--------------- 47
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+L A EE + +++ C+ P N L++ Y+
Sbjct: 48 ---------------ILKARKFHLAEELY-REVPCEFRD------PVCSNALMNGYLKIG 85
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ A ++F+ S++D SW+ ++ G R+ + ARKL D M V
Sbjct: 86 ETN---------EALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERNVV 136
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+W+AMI GY+ GL+E F F +M G ++++ T T +I N G G Q+H
Sbjct: 137 SWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGL 196
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
V R + F+ + A EVF++MP +DL+SW A++ ++ R
Sbjct: 197 VSRLGFE----FVDA-----------------AYEVFERMPEKDLISWTAMIRRFVTDGR 235
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + +F + E++ WTV+ISG + EE+L + +M
Sbjct: 236 MGKPVELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRM 277
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 271
+SQK+ +WT M+ Y +N + +ARKL D M +NAMISGY+
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKA--------- 51
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
RK H L + R V P E +NAL+
Sbjct: 52 RKFH-----------------------------LAEELYREV--PCEFRDPVCSNALMNG 80
Query: 332 YTKCGKLVQAREVFDKM--PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTV 389
Y K G+ +A VF+ + RD+VSW+A++ G R+ A+ +F +PERN+++W+
Sbjct: 81 YLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERNVVSWSA 140
Query: 390 MISGLAESGFGEESLKLFNQMK 411
MI G E G E F +M+
Sbjct: 141 MIDGYMEKGLFENGFGFFLEMR 162
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 55/323 (17%)
Query: 56 IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
+ A+ +F++ P D+ S T ++ + G + +LF+ + +D + ++ +
Sbjct: 205 VDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDT--LKEKDDFVWTVLISGFV 262
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA-MSLIAEEEWHCQQLHCDVVKWGVMCV 174
N + A+ +VRM R+G P+P + S+VL A SL+A E Q+H V+K +
Sbjct: 263 SNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNE--GLQIHSHVLKMNLEYD 320
Query: 175 PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
S+ N+L+S Y C + T
Sbjct: 321 LSIQNSLISFYAKCGNVT------------------------------------------ 338
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
A K+ + V+ N++I+G+ ++G EEA + +++M + ++ + T+ +++SA
Sbjct: 339 DAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSACT 398
Query: 295 NTGLFNCGRQLHAYVL-RTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
+ GL GR L + R +P ++H+ ++ + G L +A ++ + V+
Sbjct: 399 HAGLIEEGRNLFDTMKSRYRNEPDADHYA-----CMVDLLGRAGLLDEANDLIRSITVKP 453
Query: 353 LVS-WNAILSGYINARRLEEAKF 374
W A+L+ RL+ AK
Sbjct: 454 HSGVWGALLAASSAHLRLDLAKL 476
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 176/391 (45%), Gaps = 58/391 (14%)
Query: 7 ANLFLAQLNHPSATQTLARAIHAHILTTGFRLT--PLIRNRLIDIYCKSSNIPYAHHLFD 64
A LFL N+ + IHA I+ FRLT L+ +L I I YA +FD
Sbjct: 23 ARLFLQNCNNFKQL----KQIHARIIR--FRLTHDQLLIRKLCQISSSYGKIDYASLVFD 76
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
+ +PDIF+ +N M++AY+ + ++
Sbjct: 77 QLNDPDIFT---------------------------------WNVMIRAYNTSGLPQKSI 103
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVLNTLLS 183
LF M GF PD F++ V+ A IA +L H +K G V N +++
Sbjct: 104 FLFKDMICCGFLPDKFTYPFVINA--CIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMN 161
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y + K+FD+ + ++ SWTT+IAG V L +AR++ + +
Sbjct: 162 LYFKIGGD--------VDDGWKVFDK--MRVRNVVSWTTVIAGLVACGKLDTAREVFERI 211
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
V+W AMI+GYV++ +AFD F +M ++ +E+T SLI A + G GR
Sbjct: 212 PSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGR 271
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++H + L+ + + AL+ Y+KCG L A +VF M VR+L +WN +L+ +
Sbjct: 272 RMHDFALKNGFELGPF----LGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSF 327
Query: 364 INARRLEEAKFIFREVPERNLLTWTVMISGL 394
E +F+E+ + ++ + G+
Sbjct: 328 GVHGFGNEVLDLFKEMEKAGVVPDAITFVGV 358
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A + D + P WN MI Y GL +++ F+ M G D++TY +I+A
Sbjct: 71 ASLVFDQLNDPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIA 130
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ-AREVFDKMPVRDLV 354
+G+ + GR H ++ + V N ++ Y K G V +VFDKM VR++V
Sbjct: 131 SGVIDFGRLTHGLAIKMGFWSDVY----VQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVV 186
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
SW +++G + +L+ A+ +F +P +N+++WT MI+G ++ ++ LF +M
Sbjct: 187 SWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERM 242
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 145/361 (40%), Gaps = 64/361 (17%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCK-SSNIPYAHHLFDKTPNPDIFSRTT 76
S R H + GF ++N ++++Y K ++ +FDK ++ S TT
Sbjct: 131 SGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTT 190
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
+++ A G + A ++F P ++ +S+ AM+ Y N + A LF RM D
Sbjct: 191 VIAGLVACGKLDTAREVFERIPS--KNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVR 248
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
P+ F+ +++ A + + + +++H +K G P + L+ Y C S
Sbjct: 249 PNEFTLVSLIKACTDLGSLKLG-RRMHDFALKNGFELGPFLGTALVDMYSKCGS------ 301
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+ +A K+F L R L WN M++
Sbjct: 302 ---LDAAVKVF------------------------GLMEVRNL---------ATWNTMLT 325
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
+ HG E D F++M G+ D T+ ++SA G++ + +
Sbjct: 326 SFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQINDLELGQKYFSLM------- 378
Query: 317 SEHF----ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
+EH+ IL ++ YT+ +L + R + D M + +I + + A L+E+
Sbjct: 379 TEHYSLTPILEHYTCMVGLYTRANELNEIRTLGDTMSL-------SIEANHNVAELLQES 431
Query: 373 K 373
K
Sbjct: 432 K 432
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 171/356 (48%), Gaps = 26/356 (7%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+F N D F ++A S+ + + + T +T +T+ YNA++KA H+ +
Sbjct: 1 MFKTNFNQDCFLMNQFITASSSFSSFNINFAISTFTQITKPNTLVYNALIKACVHSHSSN 60
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+ ++ M R P +SFS+++ A +L+ + + + LH V K+G V TL
Sbjct: 61 QALLHYIHMLRSSVIPSSYSFSSLIKACTLLTDAV-NGKTLHGHVWKYGFDSHVFVQTTL 119
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y S + ARK+FDE +S +D +WTTMI+ YVRN+D+ SA L
Sbjct: 120 VEFY---------SSLGYVCDARKVFDE--MSARDVYAWTTMISAYVRNNDVESAEILFV 168
Query: 242 GMTHPIAVA-WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
M A WNA+I GY + G E F+++ S D ++T+L+S +
Sbjct: 169 EMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSK----DIISWTTLMSCYLKNKRYG 224
Query: 301 -CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVS 355
+ H V V P E I +V I+ G L +EV + V D+
Sbjct: 225 EVVKLFHEMVNEGKVVPDEVAITTV----ISACAHLGALGFGKEVHFYLMVSGFGIDVYI 280
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++++ Y LE + +F ++ E+NL W MI GLA G+ +E+L++F +M+
Sbjct: 281 GSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEME 336
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 163/425 (38%), Gaps = 85/425 (20%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H H+ GF ++ L++ Y + A +FD+ D+++ TT++SAY
Sbjct: 97 GKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVR 156
Query: 84 AGNVKLAEKLFNATP------------------------------VTLRDTISYNAMVKA 113
+V+ AE LF P + +D IS+ ++
Sbjct: 157 NNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSC 216
Query: 114 YSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVM 172
Y N VKLF M +G PD + +TV+ A + + + +++H ++ G
Sbjct: 217 YLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFG-KEVHFYLMVSGFG 275
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
+ ++L+ Y C S R L L +K+
Sbjct: 276 IDVYIGSSLIDMYAKCGSL-----------ERSLLVFYKLKEKN---------------- 308
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
WN+MI G HG +EA F +M GI+ + T+ S+++A
Sbjct: 309 ---------------LFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTA 353
Query: 293 SFNTGLFNCGRQLHAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
+ G GR+ ++ + P EH+ ++ +K G L A E+ M
Sbjct: 354 CTHAGFIQEGRRFFTSMIEDYCISPQVEHY-----GCMVDLLSKGGLLEDALEMIRGMRF 408
Query: 351 R-DLVSWNAILSGYINARRLEEAKFIFRE---VPERNLLTWTVMISGLAESGFGEESLKL 406
+ W A+L+G R LE A+ R + N ++++++ AE + K+
Sbjct: 409 EPNSFIWGALLNGCKVHRNLEIARVTVRNLMILEPSNSGHYSLLVNMYAEVNRWSDVAKI 468
Query: 407 FNQMK 411
+MK
Sbjct: 469 RTEMK 473
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 172/390 (44%), Gaps = 41/390 (10%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H+ I++ G + + +L+ +Y ++ +FDK N +F L+S Y+
Sbjct: 388 GKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 447
Query: 84 AGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP-- 139
GN + + LF + + ++ ++K ++ ++ + + GF +
Sbjct: 448 IGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAV 507
Query: 140 --------FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN-----------T 180
F F V A +L E DVV W M V+N
Sbjct: 508 VNSLIAAYFKFGGVESAHNLFDELS------EPDVVSWNSMINGCVVNGFSGNGLEIFIQ 561
Query: 181 LLSCYICCASSTLVESPVLMASARKL--------FDEAPLSQKDEPSWTTMIAGYVRNDD 232
+L + +TLV V A+ L F ++ T++ Y + +
Sbjct: 562 MLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN 621
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
L A ++ M V+W + I+ YVR GLY +A F +M S G++ D YT TS++ A
Sbjct: 622 LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 681
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
+ + GR +H+YV++ + + L V NALI Y KCG + +AR VF K+PV+D
Sbjct: 682 CACSSSLDKGRDVHSYVIKNGMGSN----LPVTNALINMYAKCGSVEEARLVFSKIPVKD 737
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPER 382
+VSWN ++ GY EA +F ++ ++
Sbjct: 738 IVSWNTMIGGYSQNSLPNEALELFLDMQKQ 767
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 173/415 (41%), Gaps = 87/415 (20%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+D T+ ++ +A N +L RA+H + F + N L+D+Y K N+ A
Sbjct: 569 VDLTTLVSVLVAWAN--IGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 626
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+F K + I S T+ ++AY G YS
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREG---------------------------LYSD---- 655
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ LF M+ G PD ++ ++++ A + + + + +H V+K G+ V N
Sbjct: 656 --AIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD-KGRDVHSYVIKNGMGSNLPVTNA 712
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L++ Y C S + AR +F + P+ KD
Sbjct: 713 LINMYAKCGS---------VEEARLVFSKIPV--KD------------------------ 737
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
V+WN MI GY ++ L EA + F M + D+ T ++ A +
Sbjct: 738 -------IVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALD 789
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
GR++H ++LR H V AL+ Y KCG LV A+ +FD +P +DL+SW ++
Sbjct: 790 KGREIHGHILRRGYFSDLH----VACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 845
Query: 361 SGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+GY EA F E+ E + +++V+++ + SG E K FN M+
Sbjct: 846 AGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMR 900
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 59/342 (17%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ Y+ G+V+ A +F+ PV +D +S+N M+ YS N + A++LF+ M++ F
Sbjct: 713 LINMYAKCGSVEEARLVFSKIPV--KDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FK 769
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD + + VL A + +A + +++H +++ G V L+ Y C
Sbjct: 770 PDDITMACVLPACAGLAALD-KGREIHGHILRRGYFSDLHVACALVDMYAKCG------- 821
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
L+ A+ LFD P +KD SWT MIAGY GM
Sbjct: 822 --LLVLAQLLFDMIP--KKDLISWTVMIAGY--------------GM------------- 850
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQ 315
HG EA TF +M GI+ DE +++ +++A ++GL N G + ++ V+
Sbjct: 851 ----HGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVE 906
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YINARRLE 370
P EH+ ++ + G L +A + + MP++ D W +LSG + + + E
Sbjct: 907 PKLEHYA-----CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAE 961
Query: 371 E-AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ A+ IF P+ N + V+ + AE+ EE KL +M+
Sbjct: 962 KVAEHIFELEPD-NTRYYVVLANVYAEAEKWEEVKKLRKRMQ 1002
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
TH + NA I+ + G A + K S + ++ +Y S++ G+
Sbjct: 332 THSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGK 389
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++H+ ++ + E ++ L+ Y CG LVQ R++FDK+ + WN ++S Y
Sbjct: 390 RVHSVIISNGISIDE----ALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445
Query: 364 INARRLEEAKFIFREVPE----RNLLTWTVMISGLAESG 398
E+ +F+++ + N T+T ++ A G
Sbjct: 446 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 484
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 172/410 (41%), Gaps = 92/410 (22%)
Query: 13 QLNHPSATQT--------LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD 64
Q +PS +T L IH +L TGF+ + + LID+Y K + +A +F
Sbjct: 486 QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 545
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
+ D+ +S+ AM+ Y+ + A+
Sbjct: 546 RLKENDV---------------------------------VSWTAMIAGYTQHDKFTEAL 572
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
LF M+ G D F++ + A + I + +Q+H G S+ N L+S
Sbjct: 573 NLFKEMQDQGIKSDNIGFASAISACAGIQALD-QGRQIHAQSCLSGYSDDLSIGNALVSL 631
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
Y C + A FD+ Y +++
Sbjct: 632 YARCGK---------VREAYAAFDQI----------------YAKDN------------- 653
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
V+WN+++SG+ + G +EEA + F +M+ G++++ +T+ S +SA+ N G+Q
Sbjct: 654 ----VSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ 709
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H + +T V+NALIT Y KCG + A F +MP ++ +SWN++++GY
Sbjct: 710 IHGMIRKTGYDSETE----VSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYS 765
Query: 365 NARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
EA +F ++ + ++L T+ ++S + G +E + F M
Sbjct: 766 QHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSM 815
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 49/315 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI +LL Y ++K A + F A + + +N M+ Y + + + ++F +
Sbjct: 419 DIVVEGSLLDLYVKCSDIKTAHEFFLACET--ENVVLWNVMLVGYGQLDNLNKSFQIFTQ 476
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ +G P+ F++ ++L + + + +Q+H V+K G N +S
Sbjct: 477 MQIEGIVPNQFTYPSILKTCTTLGATDLG-EQIHTQVLKTGFQ-----FNVYVS------ 524
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ +I Y ++ L A K+ + V
Sbjct: 525 -------------------------------SVLIDMYAKHGKLDHALKIFRRLKENDVV 553
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+W AMI+GY +H + EA + F++M GI+ D + S ISA + GRQ+HA
Sbjct: 554 SWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQS 613
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ LS+ NAL++ Y +CGK+ +A FD++ +D VSWN+++SG+ +
Sbjct: 614 CLSGYSDD----LSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 669
Query: 370 EEAKFIFREVPERNL 384
EEA IF ++ + L
Sbjct: 670 EEALNIFAQMNKAGL 684
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 147/353 (41%), Gaps = 80/353 (22%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IHA +T+GF + I N LID+Y K+ + A +F+ N
Sbjct: 205 IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFE---------------------N 243
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+K RD++S+ AM+ S N A+ LF +M G P P+ FS+VL
Sbjct: 244 LKA------------RDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVL 291
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A + + E+ +QLH V+K G Y+C A TL
Sbjct: 292 SACTKVEFFEFG-KQLHGLVLKQGFSS---------ETYVCNALVTL------------- 328
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
Y R+ +L+SA ++ M+ V++N++ISG + G
Sbjct: 329 --------------------YSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINR 368
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A F+KM+ + D T SL+SA + G G+Q H+Y ++ + + V
Sbjct: 369 ALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSD----IVVEG 424
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+L+ Y KC + A E F ++V WN +L GY L ++ IF ++
Sbjct: 425 SLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQM 477
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 153/378 (40%), Gaps = 81/378 (21%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
+S+T L LN S L +H IL GF ++ RLID Y ++ A +
Sbjct: 80 NSQTFLWLLEGCLNSRSFYDGLK--LHGKILKMGFCDEVVLCERLIDFYLAFGDLNCAVN 137
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+FD+ P LS ++ N +AE+L P
Sbjct: 138 VFDEMP-------IRSLSCWNRIFNTFIAERLMGRVP----------------------- 167
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
LF RM D F+ VL S A +Q+H + G
Sbjct: 168 ---GLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGF---------- 214
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
SST + +P +I Y +N L+SA+K+ +
Sbjct: 215 -------ESSTFICNP-------------------------LIDLYFKNGFLSSAKKVFE 242
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+ +V+W AMISG ++G EEA F +MH+ GI Y ++S++SA F
Sbjct: 243 NLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEF 302
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+QLH VL+ + V NAL+T Y++ G L A ++F M RD VS+N+++S
Sbjct: 303 GKQLHGLVLKQGFSSETY----VCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 358
Query: 362 GYINARRLEEAKFIFREV 379
G + A +F+++
Sbjct: 359 GLAQQGYINRALALFKKM 376
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
M G++ + T+ L+ N+ F G +LH +L+ + + +L LI FY
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSFYDGLKLHGKILK--MGFCDEVVLC--ERLIDFYL 127
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
G L A VFD+MP+R L WN I + +I R + +FR + +N+
Sbjct: 128 AFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 178
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 49/307 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F T L+ Y+ V AE LF ++ + + AMV Y+ N DG+ AV+ F
Sbjct: 167 NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRY 226
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G + ++F T+L A S + + +Q+H +VK G
Sbjct: 227 MHAQGVECNQYTFPTILTACSSVLARCFG-EQVHGFIVKSGF-----------------G 268
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S+ V+S ++ Y + DL +A+ +L+ M V
Sbjct: 269 SNVYVQS-------------------------ALVDMYAKCGDLKNAKNMLETMEDDDVV 303
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN+++ G+VRHGL EEA F+ MH +++D+YT+ S+++ G N + +H +
Sbjct: 304 SWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLI 361
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++T E++ L V+NAL+ Y K G + A VF+KM +D++SW ++++GY
Sbjct: 362 IKTGF---ENYKL-VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSH 417
Query: 370 EEAKFIF 376
EE+ IF
Sbjct: 418 EESLKIF 424
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 174/375 (46%), Gaps = 59/375 (15%)
Query: 15 NHPSATQTLARAIHAHILTTGFRLTPLIR-NRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
++P R+IH TT + + N+L++ KS + A LFDK P D +S
Sbjct: 13 HNPCKFMAFLRSIHT---TTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYS 69
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
T++S+Y G + A +LF+ + + +I++++++ Y A LF M+ +
Sbjct: 70 WNTMISSYVNVGRLVEARELFDGC--SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLE 127
Query: 134 GFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
G+ F+ +VL ++ LI E +H VVK G V+ L+ Y C
Sbjct: 128 GWKASQFTLGSVLRVCSSLGLIQTGE----MIHGFVVKNGFEGNVFVVTGLVDMYAKCKC 183
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
++ A LF +K+ V
Sbjct: 184 ---------VSEAEFLFKGLEFDRKNH-------------------------------VL 203
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC-GRQLHAYV 309
W AM++GY ++G +A + FR MH+ G++ ++YT+ ++++A ++ L C G Q+H ++
Sbjct: 204 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTAC-SSVLARCFGEQVHGFI 262
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+++ + + V +AL+ Y KCG L A+ + + M D+VSWN+++ G++
Sbjct: 263 VKSGFGSN----VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLE 318
Query: 370 EEAKFIFREVPERNL 384
EEA +F+ + RN+
Sbjct: 319 EEALRLFKNMHGRNM 333
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 155/394 (39%), Gaps = 86/394 (21%)
Query: 21 QTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
+ +H I+ +GF +++ L+D+Y K ++ A ++ + + D+ S +L
Sbjct: 252 RCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSL--- 308
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
MV H L+ A++LF M D +
Sbjct: 309 -----------------------------MVGFVRHGLE-EEALRLFKNMHGRNMKIDDY 338
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+F PSVLN CC ++ V
Sbjct: 339 TF--------------------------------PSVLN-------CCVVGSINPKSVHG 359
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
+ F+ L ++ Y + D+ A + + M ++W ++++GY +
Sbjct: 360 LIIKTGFENYKLVS------NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQ 413
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+ +EE+ F M G+ D++ S++SA L G+Q+H +++ ++ S+
Sbjct: 414 NNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQ-- 471
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI-NARRLEEAKF---IF 376
SV N+L+ Y KCG L A +F M V+D+++W AI+ GY N + KF +
Sbjct: 472 --SVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 529
Query: 377 REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +T+ ++ + +G +E K F QM
Sbjct: 530 SSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQM 563
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 35/208 (16%)
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
ARKLFD+ P QKDE SW TMI+ YV L AR+L DG + ++ W+++ISGY + G
Sbjct: 55 ARKLFDKMP--QKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFG 112
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EAFD FR M G + ++T S++ + GL G +H +V++ + + +
Sbjct: 113 CKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGN----V 168
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
V L+ Y KC + +A +F + E +
Sbjct: 169 FVVTGLVDMYAKCKCVSEAEFLFKGL-----------------------------EFDRK 199
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQM 410
N + WT M++G A++G G ++++ F M
Sbjct: 200 NHVLWTAMVTGYAQNGDGYKAVEFFRYM 227
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 146/352 (41%), Gaps = 84/352 (23%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+++H I+ TGF L+ N L+D+Y K+ ++ A+ +F+K
Sbjct: 355 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK------------------- 395
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
+ EK D IS+ ++V Y+ N ++K+F M+ G PD F ++
Sbjct: 396 ----MLEK----------DVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVAS 441
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
+L A + + E+ +Q+H D +K G+ SV N+L
Sbjct: 442 ILSACAELTLLEFG-KQVHLDFIKSGLRWSQSVYNSL----------------------- 477
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
+A Y + L A + M + W A+I GY ++G
Sbjct: 478 -------------------VAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKG 518
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFIL 322
+ + M S G + D T+ L+ A + GL + GR+ + + ++P EH+
Sbjct: 519 RNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYA- 577
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAK 373
+I + + GKL +A+++ D+M V+ D W ++LS LE A+
Sbjct: 578 ----CMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAE 625
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N L+ +K G++ AR++FDKMP +D SWN ++S Y+N RL EA+ +F ++ +
Sbjct: 40 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 99
Query: 386 TWTVMISGLAESGFGEESLKLFNQMK 411
TW+ +ISG + G E+ LF M+
Sbjct: 100 TWSSIISGYCKFGCKVEAFDLFRSMR 125
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 174/414 (42%), Gaps = 75/414 (18%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
+R L LN T + IHA IL TG + PLI L SSN+ H+
Sbjct: 13 TRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLI---LTKFTSTSSNLNSIHYA 69
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
P S TT +TP D +N +++AYS D +
Sbjct: 70 TSFLFPP---SHTT-------------------STPTPSYDAFLFNTLIRAYSQTRDSKS 107
Query: 123 AVKLFVR-MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
LF R M R G P+ F+F VL + I + +H VVK+G VLNTL
Sbjct: 108 NSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG-KCVHGCVVKFGFEEDVHVLNTL 166
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y CC E A K+FD++P
Sbjct: 167 IHMY-CCLGEDGFEF------AEKVFDDSPKMD--------------------------- 192
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
V W+AMI+G+VR G A D FR+M MG+ DE T S++SA + G
Sbjct: 193 ------TVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALEL 246
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ + +YV + + S + + NALI + KCG + +A ++F +M R +VSW ++++
Sbjct: 247 GKWVESYVEKKNIPKS----VELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIA 302
Query: 362 GYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
G R +A +F E+ E + + + ++S + SG ++ F M+
Sbjct: 303 GLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSME 356
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 160/320 (50%), Gaps = 25/320 (7%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
R+T +N M++AY N AV + M ++G A + ++F ++ + + + C
Sbjct: 70 RNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIAASSKCAS 129
Query: 162 -------LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
+HC VV +G+ V++ + Y S L E + AR LFD+ +
Sbjct: 130 SVMIGCLVHCHVVLFGLTNDAYVVSGFIEFY-----SALGE----LRKARVLFDQT--GR 178
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
KD WT MI GY + D+ SAR++ D M V+W+AM++ Y R + E D F +M
Sbjct: 179 KDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEM 238
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
S G++ ++ ++++A + G G +H+Y R + S + IL+ AL+ Y+K
Sbjct: 239 QSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYA-RRFDRVSSNPILAT--ALVDMYSK 295
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYI---NARR-LEEAKFIFREVPERNLLTWTVM 390
CG + A VFD + +D+ +WNA++SG +AR+ LE + + + N T+ +
Sbjct: 296 CGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAV 355
Query: 391 ISGLAESGFGEESLKLFNQM 410
++ + E L+LF +M
Sbjct: 356 LTACTHARMVREGLRLFEEM 375
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
Query: 236 ARKLLDGMTHPIAVAW--NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY------- 286
AR + +TH + N MI Y+++ A + M GI ++ YT+
Sbjct: 58 ARSIFHNLTHRNRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSC 117
Query: 287 TSLISASFNTG---LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
T+LI+AS + C H + ++ +++S I FY+ G+L +AR
Sbjct: 118 TALIAASSKCASSVMIGCLVHCHVVLFGLT---NDAYVVS---GFIEFYSALGELRKARV 171
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 403
+FD+ +D+V W A++ GY +E A+ +F E+PERN+++W+ M++ + E
Sbjct: 172 LFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREV 231
Query: 404 LKLFNQMK 411
L LF +M+
Sbjct: 232 LDLFLEMQ 239
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 25/256 (9%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H H++ G + + I+ Y + A LFD+T D+ T ++ Y G+
Sbjct: 137 VHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGD 196
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
V+ A ++F+ P R+ +S++AM+ AYS + + LF+ M+ +G P+ TVL
Sbjct: 197 VESAREMFDEMPE--RNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVL 254
Query: 147 GA---MSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
A + + + W H D V P + L+ Y C + S
Sbjct: 255 TACAHLGALTQGMWVHSYARRFDRVSSN----PILATALVDMYSKCGC---------VES 301
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGY 258
A +FD +S KD +W MI+G N D + +L M P + A+++
Sbjct: 302 ALSVFD--GISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTAC 359
Query: 259 VRHGLYEEAFDTFRKM 274
+ E F +M
Sbjct: 360 THARMVREGLRLFEEM 375
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 49/310 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T+L+ Y+ + A LF+ V + + ++ ++ YS ++KLF +
Sbjct: 175 DVYVCTSLIDFYTKHACIDDARLLFDGLQV--KTSFTWTTIIAGYSKQGRSQVSLKLFDQ 232
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK PD + S+VL A ++ E +Q+HC V++ G++ S++N + Y C
Sbjct: 233 MKEGHVCPDKYVLSSVLSACLMLKFLEGG-KQIHCYVLRSGIVMDVSMVNGFIDFYFKCH 291
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L RKLFD + K+ SWTT+IAG ++N
Sbjct: 292 KVQL---------GRKLFDR--MVDKNVVSWTTVIAGCMQN------------------- 321
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+ +A D F +M MG D + TS++++ + GRQ+HAY
Sbjct: 322 ------------SFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYA 369
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ + + V N LI Y KC L AR+VF+ M DLVS+NA++ GY +L
Sbjct: 370 IKVNIDNDDF----VKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKL 425
Query: 370 EEAKFIFREV 379
EA +FRE+
Sbjct: 426 CEALDLFREM 435
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 163/379 (43%), Gaps = 66/379 (17%)
Query: 14 LNHPSATQTLARAIHAHILTTGF---RLTPLIRNRLIDI----YCKSSNIPYAHHLFDKT 66
LN + QTL H L F R+ P+I R I +S +IP + K
Sbjct: 9 LNKINVIQTL----HFSTLLHQFLEPRIPPIIEQRKIGRELANLLQSPHIPCCKKIHSKI 64
Query: 67 P-----NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
DIF TLL AYS V A KLF+ ++ ++ +++++MV Y+H+
Sbjct: 65 VVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDT--MSHKNLVTWSSMVSMYTHHSHCL 122
Query: 122 AAVKLFVRMKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ LFV+ R P+ + ++V+ A + Q+H VVK G
Sbjct: 123 EALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLN-PALQIHGLVVKGGY--------- 172
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
+ Y+C + + AR LFD L K +WTT+IAGY + + KL
Sbjct: 173 VQDVYVCTSLIDFYTKHACIDDARLLFD--GLQVKTSFTWTTIIAGYSKQGRSQVSLKL- 229
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
FD ++ H + D+Y +S++SA
Sbjct: 230 ---------------------------FDQMKEGH---VCPDKYVLSSVLSACLMLKFLE 259
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
G+Q+H YVLR+ + +S+ N I FY KC K+ R++FD+M +++VSW ++
Sbjct: 260 GGKQIHCYVLRSGIVMD----VSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVI 315
Query: 361 SGYINARRLEEAKFIFREV 379
+G + +A +F E+
Sbjct: 316 AGCMQNSFHRDALDLFVEM 334
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 141/355 (39%), Gaps = 82/355 (23%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH ++L +G + + N ID Y K + LFD+ + ++ S TT+++
Sbjct: 261 GKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAG--- 317
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
M ++ + A+ LFV M R G+ PD F +
Sbjct: 318 -------------------------CMQNSFHRD-----ALDLFVEMARMGWNPDAFGCT 347
Query: 144 TVLGAM-SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+VL + SL+A E+ +Q+H +K + V N L+ Y C
Sbjct: 348 SVLNSCGSLVALEKG--RQVHAYAIKVNIDNDDFVKNGLIDMYAKC-------------- 391
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
D L ARK+ + M V++NAMI GY R
Sbjct: 392 ----------------------------DSLTDARKVFNLMAAIDLVSYNAMIEGYSRQD 423
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EA D FR+M + SL+ S + Q+H +++ V E
Sbjct: 424 KLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEF--- 480
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ALI Y+KC ++ AR VF+++ +D+V W A+ SGY EE+ +++
Sbjct: 481 -AGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYK 534
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 158/384 (41%), Gaps = 64/384 (16%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLA 90
+L + L L + R + Y NI + D F + L+ Y+ ++ A
Sbjct: 349 VLNSCGSLVALEKGRQVHAYAIKVNI-----------DNDDFVKNGLIDMYAKCDSLTDA 397
Query: 91 EKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS 150
K+FN D +SYNAM++ YS A+ LF M+ +P F ++LG +
Sbjct: 398 RKVFNLMAAI--DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSA 455
Query: 151 LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA 210
+ E Q+H ++K+GV + L+ Y C+ + AR +F+E
Sbjct: 456 SLYHLEL-SNQIHGLIIKYGVSLDEFAGSALIDVYSKCSR---------VGDARLVFEE- 504
Query: 211 PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
+++ D+ V W AM SGY + EE+
Sbjct: 505 -----------------IQDKDI---------------VVWTAMFSGYTQQSENEESLKL 532
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
++ + ++ +E+T+ ++I+A+ N G+Q H V++ V N L+
Sbjct: 533 YKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPF----VANTLVD 588
Query: 331 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLT 386
Y K G + +A + F +D WN++++ Y E+A +F ++ + N +T
Sbjct: 589 MYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVT 648
Query: 387 WTVMISGLAESGFGEESLKLFNQM 410
+ ++S + +G + F+ M
Sbjct: 649 FVGVLSACSHTGLLDLGFDHFDSM 672
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 138/342 (40%), Gaps = 83/342 (24%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L+ IH I+ G L + LID+Y K S + A +F++ + DI
Sbjct: 462 LSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDI----------- 510
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+ + AM Y+ + ++KL+ ++ P+ F+F
Sbjct: 511 ----------------------VVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTF 548
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ V+ A S IA H QQ H V+K G P V NTL+ Y A S +E
Sbjct: 549 AAVITAASNIASLR-HGQQFHNQVIKMGFDDDPFVANTLVDMY---AKSGSIE------E 598
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A K F + KD W +MIA Y +HG
Sbjct: 599 AHKAF--ISTNWKDTACWNSMIA-------------------------------TYAQHG 625
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS-EHFI 321
E+A F M G++ + T+ ++SA +TGL + G + + ++P EH++
Sbjct: 626 EAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYV 685
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILSG 362
+++ + GKL +A+E +KMP++ V W ++LS
Sbjct: 686 -----CMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK-MHSMGI 279
T++ Y + + + A KL D M+H V W++M+S Y H EA F + M S
Sbjct: 78 NTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNE 137
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPSEHFILSVNNALITFYTKCGKL 338
+ +EY S++ A G N Q+H V++ VQ + V +LI FYTK +
Sbjct: 138 KPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQD-----VYVCTSLIDFYTKHACI 192
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
AR +FD + V+ +W I++GY R + + +F ++ E
Sbjct: 193 DDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKE 235
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 184/432 (42%), Gaps = 93/432 (21%)
Query: 24 ARAIHAHILTTGFRLTPL-IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IHA +LTTG L + ++L+ +Y +++ A LF P++F+
Sbjct: 33 GKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKSATLLFHNIHKPNVFA--------- 83
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+N M+ +N A+ F M+ G + F+F
Sbjct: 84 ------------------------FNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTF 119
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
V+ + + + +Q+H + + G+M + N L+ Y C S +
Sbjct: 120 GIVIKTCVGLMDMK-KGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGS---------VDY 169
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----------------- 245
A ++FD +S++D SWT+MI G+ + A L + M
Sbjct: 170 ACRVFD--GMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATY 227
Query: 246 ----------------------PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
P VAWNA+ISG+ ++ + E F FR+M GI ++
Sbjct: 228 ARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQ 287
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
T +L+ A + G GR++H ++ R + + + +ALI Y+KCG L AR
Sbjct: 288 VTIAALLPACGSVGSVKWGREVHGFICRKGFDAN----VFIASALIDMYSKCGSLKDARN 343
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGF 399
VFDK+ +++ SWNA++ + ++ A +F ++ E L +T+ ++S + SG
Sbjct: 344 VFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGS 403
Query: 400 GEESLKLFNQMK 411
E+ L++F MK
Sbjct: 404 VEKGLEIFTLMK 415
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 155/368 (42%), Gaps = 30/368 (8%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H I G LI N LID+Y K ++ YA +FD D+ S T+++ +
Sbjct: 135 GKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCN 194
Query: 84 AGNVKLAEKLFNATPVTLRD--TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
G ++ A LF + + ++NA++ Y+ D A RM+++GF PD +
Sbjct: 195 TGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVA 254
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN---TLLSCYICCASSTLVE--S 196
++ ++ + Q + M V + T+ + C S V+
Sbjct: 255 WNALISGFA-------QNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGR 307
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
V RK FD + +I Y + L AR + D + +WNAMI
Sbjct: 308 EVHGFICRKGFDANVFIA------SALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMID 361
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VV 314
+ + G+ + A + F KM G+Q +E T+ ++SA ++G G ++ + V
Sbjct: 362 CFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVE 421
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
EH+ ++ + GK+V+A E MP++ S I ++N ++ K
Sbjct: 422 ICKEHYA-----CIVDLLCRSGKIVEAYEFIKAMPIQVTES---IAGAFLNGCKIHGRKD 473
Query: 375 IFREVPER 382
+ +++ E
Sbjct: 474 LAKKMAEE 481
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 159/354 (44%), Gaps = 74/354 (20%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + + + YS G+ A K+F+ PV RD +S+ ++ Y + AV LF+R
Sbjct: 143 DMFVQNSFVHVYSICGDTVGASKVFDFMPV--RDVVSWTGLISGYMKAGLFNDAVALFLR 200
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS---------VLNT 180
M AP+ +F ++LGA C +L C + G+ + S V NT
Sbjct: 201 MD---VAPNAATFVSILGA----------CGKLGCLNLGKGIHGLVSKYPHGKELVVSNT 247
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y+ C S T A++LFDE P +KD SWT+
Sbjct: 248 LMDMYVKCESVT---------DAKRLFDEIP--EKDIVSWTS------------------ 278
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
MISG V++ +E+ D F +M G + D TS++SA + GL +
Sbjct: 279 -------------MISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLD 325
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
GR +H Y+ + ++ H + +LI Y KCG + A+++F+ +P +++ +WNA +
Sbjct: 326 YGRWVHEYIDHSRIKWDVH----IGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYI 381
Query: 361 SGY-INARRLEEAK---FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
G IN E K ++ N +T+ + S SG +E F QM
Sbjct: 382 GGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQM 435
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N +ISGY A +R + G D YT +++ + +Q+H ++
Sbjct: 78 NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVK 137
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
T + + V N+ + Y+ CG V A +VFD MPVRD+VSW ++SGY+ A +
Sbjct: 138 TDLWCD----MFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFND 193
Query: 372 AKFIF 376
A +F
Sbjct: 194 AVALF 198
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 25/225 (11%)
Query: 60 HHLFDKTPN-PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
H L K P+ ++ TL+ Y +V A++LF+ P +D +S+ +M+
Sbjct: 230 HGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPE--KDIVSWTSMISGLVQYQ 287
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMCVP 175
++ LF M GF PD ++VL A + L+ W + + +KW V
Sbjct: 288 CPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDV---- 343
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
+ +L+ Y C + A+++F+ P K+ +W I G N
Sbjct: 344 HIGTSLIDMYAKCGCIEM---------AQQMFNLLP--SKNIRTWNAYIGGLAINGHGQE 392
Query: 236 ARK----LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
A K L++ T P + + A+ S GL +E F++M S
Sbjct: 393 ALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTS 437
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 185/399 (46%), Gaps = 55/399 (13%)
Query: 17 PSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
P+ + +L + +H+ I T+G I N L++ Y K + A LFD+ P + S
Sbjct: 84 PTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNI 143
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
++ AY GN++ A+ LF+ +T R+ ++NAMV A+ LF RM GF
Sbjct: 144 MIKAYLEMGNIENAKNLFDE--MTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFV 201
Query: 137 PDPFSFSTVL-GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PD +SF +VL G L A + +Q+H V K G N+++ C
Sbjct: 202 PDEYSFGSVLRGCAHLRAL--FVGEQVHAYVAKCGFE-----FNSVVGC----------- 243
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
++ Y++ L + +++ M + VAWN ++
Sbjct: 244 --------------------------SLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLM 277
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G ++ +E D + M G + D+ T+ S+IS+ G+Q+HA V++
Sbjct: 278 AGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHA----EVIK 333
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
++SV ++L++ Y+KCG L + + F + RD+V W+++++ Y + E+A +
Sbjct: 334 AGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCEKAIKL 393
Query: 376 FREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
F + + N+ +T+ ++ + SG ++ L F+ M
Sbjct: 394 FNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMM 432
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I+ G ++AF++F I + ++ LI + T + G+QLH+ + +
Sbjct: 48 ITTLCSKGHIKKAFESFL----CDIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGC 103
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
S+ FI +N L+ FY+K G+L A ++FD+MP R+ +S N ++ Y+ +E AK
Sbjct: 104 S-SDKFI---SNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKN 159
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F E+ ERN+ TW M++GL + G EE+L LF++M
Sbjct: 160 LFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRM 195
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 63/312 (20%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+L Y AG++ E++ P + +++N ++ + N + + MK G+
Sbjct: 244 SLAHMYMKAGSLCNGERIIKWMPNC--NLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGY 301
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQ--QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
PD +F +V+ + S +A CQ Q+H +V+K G V SV+++L+S Y C S
Sbjct: 302 RPDKITFVSVISSCSELAT---LCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGS--- 355
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ + K F E ++D W++MIA Y
Sbjct: 356 ------LQDSIKAFLEC--EERDVVIWSSMIAAY-------------------------- 381
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-----RQLHAY 308
G+ HG E+A F + +E T+ SL+ A ++GL + G + Y
Sbjct: 382 ---GF--HGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKY 436
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINAR 367
L+ + EH+ ++ + G L +A + MPV D + W +LS +
Sbjct: 437 GLKARL---EHY-----TCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHK 488
Query: 368 RLEEAKFIFREV 379
E A+ + EV
Sbjct: 489 NEEMARRVAEEV 500
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 84/422 (19%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYC--KSSNIPYAHHLFDKTPN 68
L ++NH + + L +H+ T G T +LI +C SN+ YAH +F+ +
Sbjct: 13 LTKINHLNQLKQL----QSHLTTLGHSQTHFYAFKLIR-FCSLNLSNLHYAHQIFNHIHS 67
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P+I+ T +++A+S+ H KLF
Sbjct: 68 PNIYLFTAIITAFSS-----------------------------------QQHTTFKLFK 92
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M P+ F + VL ++ +E + +H +VK G + P V +L+ Y
Sbjct: 93 TMLNSNIRPNNFIYPHVLKSV----KERFLVDLVHAQIVKCGFLNYPVVETSLVDSY--- 145
Query: 189 ASSTLVESPVL--MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
S VL + A K+FDE +S+++ +T +++GY+R D+ + D M
Sbjct: 146 -------SKVLGGLRDAHKVFDE--MSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDR 196
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKM----------HSMGIQMDEYTYTSLISASFNT 296
AWNA+ISG ++G + E FR+M G + ++ T ++SA +
Sbjct: 197 DVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHG 256
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
G+ G+ +H YV R F++ V+NAL+ Y KCG L AR+VF+ + L
Sbjct: 257 GMLQLGKWIHGYVYR------HGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLT 310
Query: 355 SWNAILSGYINARRLEEAKFIFREVPE------RNLLTWTVMISGLAESGFGEESLKLFN 408
SWN++++ Y + E+A F ++ E + +T+ +++ G E+ F
Sbjct: 311 SWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFE 370
Query: 409 QM 410
M
Sbjct: 371 MM 372
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 157/377 (41%), Gaps = 70/377 (18%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKS-SNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L +HA I+ GF P++ L+D Y K + AH +FD+ +I T L+S Y
Sbjct: 118 LVDLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGY 177
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM------KRDGF 135
G+V+ +F+ + RD ++NA++ + N ++LF M GF
Sbjct: 178 LRVGDVEKGLMVFD--EMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGF 235
Query: 136 A----PDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
P+ + VL G ++ +W +H V + G + V N L+ Y C
Sbjct: 236 CKGNKPNQVTVVCVLSACGHGGMLQLGKW----IHGYVYRHGFVVDSFVSNALVDMYGKC 291
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
S L ARK+F+ RK G+T
Sbjct: 292 GSLEL---------ARKVFE-------------------------MDQRK---GLT---- 310
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSM--GIQMDEYTYTSLISASFNTGLFNCGRQLH 306
+WN+MI+ Y HG E+A F KM G++ DE T+ L++A + GL G
Sbjct: 311 -SWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYF 369
Query: 307 AYVLRTV-VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYI 364
+++ ++P ++ LI + G+ +A +V M + D V W ++L+G
Sbjct: 370 EMMIKEYGIEPQ----IAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCK 425
Query: 365 NARRLEEAKFIFREVPE 381
R + A+F +++ E
Sbjct: 426 VHGRTDLAEFAAKKLVE 442
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 147/296 (49%), Gaps = 19/296 (6%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
NP F TLLS S V +F+ L DT N ++ +Y ++ H A+ +
Sbjct: 69 NP--FLSRTLLSRASNLCTVDFTFLIFHHFNNPL-DTFCVNTVINSYCNSYVPHKAIVFY 125
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+ GF + ++F +++ A S ++ + + + H VK GV V V N+L Y
Sbjct: 126 FSSLKIGFFANSYTFVSLISACSKMSCVD-NGKMCHGQAVKNGVDFVLPVENSLAHMYGS 184
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + AR +FD + +D SW +MI GYV+ DL++A KL D M
Sbjct: 185 CG---------YVEVARVMFD--GMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERN 233
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V WN +ISGY + A FR+M + I+ + T ++A +G G+ +H
Sbjct: 234 LVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHG 293
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++R ++ S L ++ ALI Y KCG++ A +VF++M R+LVSWNA++ G+
Sbjct: 294 SMIRLFMRSS----LILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGH 345
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
T + N+ + YV H F + + +G + YT+ SLISA + G+
Sbjct: 102 TFCVNTVINSYCNSYVPHKAIVFYFSSLK----IGFFANSYTFVSLISACSKMSCVDNGK 157
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
H ++ V F+L V N+L Y CG + AR +FD M RDLVSWN+++ GY
Sbjct: 158 MCHGQAVKNGVD----FVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGY 213
Query: 364 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ L A +F +PERNL+TW +ISG ++ +LKLF +M
Sbjct: 214 VKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREM 260
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 93/254 (36%), Gaps = 45/254 (17%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ H + G + N L +Y + A +FD + D+ S +++ Y
Sbjct: 156 GKMCHGQAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVK 215
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G++ A KLF+ P R+ +++N ++ YS + A+KLF M R + +
Sbjct: 216 VGDLSAAHKLFDVMPE--RNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMV 273
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ A C S L E + S
Sbjct: 274 CAVTA--------------------------------------CGRSGRLKEGKSVHGSM 295
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+LF + L T +I Y + + +A K+ + M+ V+WNAMI G+ HG
Sbjct: 296 IRLFMRSSLILD-----TALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGN 350
Query: 264 YEEAFDTFRKMHSM 277
E+ F M M
Sbjct: 351 PEDGLSLFDLMVGM 364
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 179/401 (44%), Gaps = 71/401 (17%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKS--SNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IHAH +T I +R++ + S + YA LF PNP+IF
Sbjct: 5 KQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFD--------- 55
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
YN+++ +Y+ N H +F +M P+ +F
Sbjct: 56 ------------------------YNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTF 91
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWG----VMCVPSVLNTLLSCYICCASSTLVESPV 198
+T++ A ++ E Q+ +K G V V SV+N S +
Sbjct: 92 TTLVKACVSLSSLE----QVFTLSMKLGNSSDVYFVSSVINAFSK-----------HSAI 136
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
+A R++FDE S ++ WT++++GY + AR + D M +++AM+SGY
Sbjct: 137 HLA--RQVFDEC--SNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGY 192
Query: 259 VRHGLYEEAFDTFRKMHSMG-----IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
VR+G + E FR++ ++ + S+++A G F G+ +H+YV
Sbjct: 193 VRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENG 252
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI----NARRL 369
++ + L + ALI FY KCG + A +VF+KMPV+D+ +W+A++ G N L
Sbjct: 253 LE----YDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMAL 308
Query: 370 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
E + + + P+ N +T+ +++ ES +LF M
Sbjct: 309 ELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIM 349
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
D A L + +P +N++I+ Y + + + F F KM + I+ + +T+T+L+
Sbjct: 37 DFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVK 96
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A + Q+ ++ +F+ SV NA ++K + AR+VFD+ R
Sbjct: 97 ACVSLSSL---EQVFTLSMKLGNSSDVYFVSSVINA----FSKHSAIHLARQVFDECSNR 149
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++V W +++SGY + + EA+ +F ++P RN +++ M+SG +GF E ++LF ++K
Sbjct: 150 NVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELK 209
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 64/328 (19%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
+I+ + K S I A +FD+ N ++ T+L+S Y + G V A +F+ P LR+
Sbjct: 126 VINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMP--LRNEA 183
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS-----TVLGAMSLIA---EEEW 157
SY+AMV Y N V+LF +K+ F+ +VL A +++ E +W
Sbjct: 184 SYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKW 243
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+H V + G+ + L+ Y+ C + A K+F++ P+ KD
Sbjct: 244 ----IHSYVEENGLEYDLELGTALIDFYMKCG---------WVKGAEKVFNKMPV--KDV 288
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
+W+ MI G N + N M A + F KM +
Sbjct: 289 ATWSAMILGLAINGN-------------------NKM------------ALELFEKMEKV 317
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKC 335
G + +E T+ +++A + LF +L + + PS EH+ ++ +
Sbjct: 318 GPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHY-----GCVVDVLARS 372
Query: 336 GKLVQAREVFDKMPVR-DLVSWNAILSG 362
G++ +A + M + D W ++L+G
Sbjct: 373 GQVKKALTFINSMHIEPDGAIWGSLLNG 400
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 177/360 (49%), Gaps = 27/360 (7%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
L K + D+ L++ Y ++ A ++F+ TP ++ +N +V A +
Sbjct: 180 LIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETP--YKEDFLWNTIVMANLRSERWK 237
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A++LF M+RD + +L A L A E +QLH +++G++ V N+
Sbjct: 238 NALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEG--KQLHGYALRFGLVSNTLVCNS 295
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV----RNDDLASA 236
++S Y + L AR +FD ++ SW ++I Y ND L +
Sbjct: 296 IISMYSRNSRFKL---------ARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTI 346
Query: 237 RKLLD-GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
R ++ P + WN+++SGY+ G +E +FR +HS+G + D + TS + A
Sbjct: 347 RNGMECSGIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIE 406
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G F G+++H Y++R+ + ++ + V +L+ Y K L +A+ V + +++ +
Sbjct: 407 LGFFKLGKEIHGYIMRSNL----NYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCA 462
Query: 356 WNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
WN+++SGY + EA + ++ E +L+TW ++SG + G +E+L + N++K
Sbjct: 463 WNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIK 522
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 183/436 (41%), Gaps = 64/436 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN--PDIFSRTTLLSAY 81
+ +H + L G L+ N +I +Y ++S A +FD + ++ S +++ +Y
Sbjct: 274 GKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSY 333
Query: 82 SAAGNVKLA-EKLFNATPVT--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
+ G + A + + N + D I++N+++ Y + F + GF PD
Sbjct: 334 AVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPD 393
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
S ++ L A+ + + +++H +++ S LN Y+C + +
Sbjct: 394 SCSVTSALQAVIELGFFKLG-KEIHGYIMR-------SNLN--YDVYVCTSLVDMYVKND 443
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAM 254
+ A+ + A K+ +W ++I+GY A KLL+ M P V WN +
Sbjct: 444 CLEKAQAVLHRA--KNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGL 501
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS----------------------- 291
+SGY G +EA ++ S GI + ++T+LIS
Sbjct: 502 VSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENV 561
Query: 292 ------------ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
A L G +LH + ++ + V ALI Y++ GKL
Sbjct: 562 KPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDD----IYVATALIDMYSEAGKLK 617
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLA 395
A VF+K+ + L WN ++ GY EE ++ ++ ER++ +T+T ++S
Sbjct: 618 VAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACK 677
Query: 396 ESGFGEESLKLFNQMK 411
SG +E K F+ M+
Sbjct: 678 NSGLVDEGWKYFDSMQ 693
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 34/352 (9%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH +I+ + + L+D+Y K+ + A + + N ++ + +L+S YS
Sbjct: 412 LGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYS 471
Query: 83 AAGNVKLAEKLFNA------TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
G A KL N TP D +++N +V YS A+ + R+K G
Sbjct: 472 FKGQFGEAVKLLNQMVEEGITP----DLVTWNGLVSGYSMQGRIDEALTIINRIKSSGIT 527
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVK-WGVMCVPSVL-NTLLSCYICCASSTLV 194
P+ S++ ++ S + + D +K + M +V N+ C + CA +
Sbjct: 528 PNVVSWTALISGCSQ--------NEKYMDALKIFSQMQAENVKPNSTTICSLLCACA--- 576
Query: 195 ESPVLMASARKL--FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
P L+ +L F D T +I Y L A + + + WN
Sbjct: 577 -GPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWN 635
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR- 311
M+ GY H EE + KM I+ D T+T+L+SA N+GL + G + +
Sbjct: 636 CMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQED 695
Query: 312 -TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+V EH+ ++ K G L +A + MP++ D W A+L+
Sbjct: 696 YNIVPTIEHYC-----CMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLA 742
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE-EAFDTFRKMHSMGIQ 280
TM+ Y+ D SA K+ + WN+ + + G E F +M+S G++
Sbjct: 92 TMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKGVE 151
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D +T ++ F G ++HA +++ H + ++ ALI FY KC + +
Sbjct: 152 FDSKAFTFVLKICLALREFLFGLEVHA----CLIKKGFHVDVHLSCALINFYGKCWSIDK 207
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
A +VF + P ++ WN I+ + + R + A +F
Sbjct: 208 ANQVFHETPYKEDFLWNTIVMANLRSERWKNALELF 243
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 184/400 (46%), Gaps = 51/400 (12%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IHA IL G ++ N ++D+Y K YA F+ D+ S ++ AY
Sbjct: 152 FGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYL 211
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG--FAPDPF 140
G+V+ + ++F P +D +S+N ++ A++ M G F+P F
Sbjct: 212 REGDVEKSLEMFRNFPN--KDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTF 269
Query: 141 SFSTVL-GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
S + +L ++SL+ +QLH V+ +G+ + ++L+ Y C
Sbjct: 270 SIALILVSSLSLVEVG----RQLHGRVLTFGLNSDGYIRSSLVEMYGKCGR--------- 316
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA--VAWNAMISG 257
M A + + PL+ ++R + K P A V+W++M+SG
Sbjct: 317 MDKASTILKDVPLN-------------FLRKGNFGVTCK------EPKARMVSWSSMVSG 357
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
YV +G YE+ TFR M I +D T ++ISA N G+ G+Q+HAY+ + ++
Sbjct: 358 YVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRID 417
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ V ++LI Y+K G L A +F+++ ++V W +++SG + +EA +F
Sbjct: 418 AY----VGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473
Query: 378 E------VPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+P N +T+ +++ + G EE + F MK
Sbjct: 474 GMLNLGIIP--NEVTFVGVLNACSHVGLIEEGCRYFRMMK 511
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 174/402 (43%), Gaps = 73/402 (18%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS-A 83
RA+H H G N L+ +Y KSSN+ +AH LFD+ + + + T L+S ++ A
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
AG+ +L LF M+ DG P+ ++ S
Sbjct: 112 AGSSEL---------------------------------VFSLFREMQADGACPNQYTLS 138
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+VL S ++ + +H +++ GV + N++L Y+ C ES
Sbjct: 139 SVLKCCSRENNIQFG-KGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAES------- 190
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
F E + +KD SW MI Y+R D+ + ++ + V+WN +I G ++ G
Sbjct: 191 ---FFELMI-EKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGY 246
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
A + M + G + T++ + + L GRQLH VL T S+ +I S
Sbjct: 247 ERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL-TFGLNSDGYIRS 305
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVR----------------DLVSWNAILSGYINAR 367
+L+ Y KCG++ +A + +P+ +VSW++++SGY+
Sbjct: 306 ---SLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNG 362
Query: 368 RLEEAKFIFR----EVPERNLLTWTVMISGLAESG---FGEE 402
+ E+ FR E+ ++ T +IS A +G FG++
Sbjct: 363 KYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQ 404
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 181/408 (44%), Gaps = 67/408 (16%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S T + + IH+HIL TGF I +L+ +Y KS ++ YA +FD D+ RT
Sbjct: 50 SQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFD-----DLHDRT-- 102
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
LSA YN M+ Y N ++ LF ++ G P
Sbjct: 103 LSA--------------------------YNYMIGGYLKNGQVDESLDLFHQLSVSGEKP 136
Query: 138 DPFSFSTVLGAMS------LIAE--EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
D F+FS +L A + ++ + H Q L DV K V+C L+ Y+
Sbjct: 137 DGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVEKDDVLCT-----ALIDSYVKNG 191
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ R +FD +S+K+ S T++I+GY+ A + V
Sbjct: 192 R---------VGYGRTVFD--VMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVV 240
Query: 250 AWNAMISGYVRHGLYE-EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+NAMI GY + Y + + + M + + + T+ S+I A F G Q+ A
Sbjct: 241 VFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQ 300
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+++T ++ + +ALI Y+KCG+++ A+ VFD M +++ SW +++ GY
Sbjct: 301 LMKTPFFA----VIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGF 356
Query: 369 LEEAKFIFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EA +F+++ N +T+ ++ A +G E ++F M+
Sbjct: 357 PDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSME 404
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 162/366 (44%), Gaps = 55/366 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +HA IL ++ LID Y K+ + Y +FD ++ S T+L+S Y
Sbjct: 160 LGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYM 219
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFVRMKRDGFAPDPFS 141
G AE +F T +D + +NAM++ YS + ++++++ M+R F P+ +
Sbjct: 220 NKGFFDDAEYIFRKT--LDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLST 277
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F++++GA S++A E +Q+ ++K V + + L+ Y C +
Sbjct: 278 FASIIGACSVLAAFEI-GEQVQAQLMKTPFFAVIKLGSALIDMYSKCGR---------VI 327
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
A+++FD + +K+ SWT+MI GY +N
Sbjct: 328 DAQRVFDH--MLEKNVFSWTSMIDGYGKN------------------------------- 354
Query: 262 GLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPS-E 318
G +EA + F+KM I + T+ S ++A + GL G ++ + ++P E
Sbjct: 355 GFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRME 414
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFR 377
H+ ++ + G L QA E +MP R + W A+LS +E AK
Sbjct: 415 HYA-----CMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAAN 469
Query: 378 EVPERN 383
E+ + N
Sbjct: 470 ELFKLN 475
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 173/364 (47%), Gaps = 67/364 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ PD ++ ++L++ YS LA K+F+ +PV L TISYNAM+ Y++N+
Sbjct: 84 HILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNL--TISYNAMISGYTNNMMI 141
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTV--LGAMS--LIAEEEWHCQQLHCDVVKWGVMCVPS 176
A+KLF RM + F ++V LG +S L+ E+ LH K+G S
Sbjct: 142 VEAIKLFRRM----LCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLS 197
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
V N+ L+ Y+ C + RK+FDE + KD +W MI+GY +N A
Sbjct: 198 VGNSFLTMYVKCGE---------VEYGRKVFDE--ILVKDLITWNAMISGYAQN---GHA 243
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFN 295
R++L + +R+M + G+ D T ++ + N
Sbjct: 244 RRVL----------------------------EIYREMRKVGGVNPDPVTLLGVLCSCAN 275
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--DL 353
G GR++ + R + S F++ NALI Y +CG LV+AREVFD M R +
Sbjct: 276 LGAQGIGREVEKEIDRFGFR-SNSFLM---NALINMYARCGNLVRAREVFDCMDERSKSV 331
Query: 354 VSWNAILSGYINARRLEEAKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLF 407
VSW AI+ GY E A +F + P+R + + ++S + +G E+ L+ F
Sbjct: 332 VSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTV--FVSVLSACSHAGLTEKGLEYF 389
Query: 408 NQMK 411
++M+
Sbjct: 390 DEME 393
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AWN + + + EA +R M + +T+ L+ + L G QLH+++
Sbjct: 26 AWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHSHI 85
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+T QP + +++LI Y+K AR+VFD+ PV +S+NA++SGY N +
Sbjct: 86 LKTGSQPDPY----THSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMI 141
Query: 370 EEAKFIFRE-VPERNLLTWTVMISGLAESGFGEESLKL 406
EA +FR + E +V + GL E L+L
Sbjct: 142 VEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRL 179
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 158/371 (42%), Gaps = 80/371 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+AIHA + GF T + N L +Y K Y LF K PD+ S T L+ Y
Sbjct: 271 GKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQ 330
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G D A+ F RM++ +P+ ++F+
Sbjct: 331 MG---------------------------------DEERALDAFKRMRKSDVSPNEYTFA 357
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+V+ A + +A +W +Q+H ++ G++ SV N++++ Y C
Sbjct: 358 SVISACANLAITKWG-EQIHGHALRLGLVDALSVSNSIITLYSKCG-------------- 402
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
L EA L + DGMT ++W+ +IS Y +
Sbjct: 403 --LLQEASL--------------------------VFDGMTRKDIISWSTIISVYCQGSH 434
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+EAF+ M G + +E+ S++S + L G+Q+HAY L + +H +
Sbjct: 435 AKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGL---DHETM- 490
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V++ALI+ Y++ G L +A ++FD + D+VSW A+++GY +EA +F +
Sbjct: 491 VHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVG 550
Query: 384 LLTWTVMISGL 394
L+ V G+
Sbjct: 551 LMPDYVTFIGI 561
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 141/320 (44%), Gaps = 59/320 (18%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSH---NLDGHAAVKLF 127
+F + L+ Y G + +F +T R+ +S+ A++ H +LDG + F
Sbjct: 186 VFVSSALVDMYMKVGKTEQGCSVFE--NMTTRNVVSWTAVIVGLVHAGCSLDG---LSYF 240
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M R D +F+ L A S + + + +H +K G V+NTL + Y
Sbjct: 241 SEMWRSKVGYDSHTFAVALKA-SAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSK 299
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C RK P + +L M+ P
Sbjct: 300 C---------------RK------------PDYVM---------------RLFGKMSTPD 317
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V+W +I YV+ G E A D F++M + +EYT+ S+ISA N + G Q+H
Sbjct: 318 VVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHG 377
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ LR + + LSV+N++IT Y+KCG L +A VFD M +D++SW+ I+S Y
Sbjct: 378 HALRLGLVDA----LSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGS 433
Query: 368 RLEEA----KFIFREVPERN 383
+EA ++ RE P+ N
Sbjct: 434 HAKEAFNYLSWMSREGPKPN 453
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 63/293 (21%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
++++ YS G ++ A +F+ +T +D IS++ ++ Y A M R+G
Sbjct: 393 SIITLYSKCGLLQEASLVFDG--MTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGP 450
Query: 136 APDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
P+ F+ ++VL G+M+L+ +Q+H Y C
Sbjct: 451 KPNEFALASVLSVCGSMALLEPG----KQVHA--------------------YALCIG-- 484
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
++ ++ SA +I+ Y R+ +L A K+ D + + V+W
Sbjct: 485 -LDHETMVHSA-------------------LISMYSRSGNLQEASKIFDSIKNNDIVSWT 524
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
AMI+GY HG +EA F + S+G+ D T+ +++A + GL + G + Y L T
Sbjct: 525 AMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLG--FYYYKLMT 582
Query: 313 ---VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAIL 360
+ PS EH+ +I + G+L +A + MP D V W+ +L
Sbjct: 583 NEYQIAPSKEHY-----GCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLL 630
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 137/342 (40%), Gaps = 57/342 (16%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P++ + L G + A +FN ++ RD IS+ ++ Y + + + A+ LF
Sbjct: 82 PNMPELNSQLKQLMKLGKICEARDMFN--KMSHRDEISWTNLIAGYVNAANSNEALILFS 139
Query: 129 RMKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M D G D F S L A +L + + LH VK G++
Sbjct: 140 NMWVDSGLQKDQFVVSVALKACAL-GMNVYFGELLHGFSVKSGLI--------------- 183
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+ V ++SA ++ Y++ + + MT
Sbjct: 184 --------NSVFVSSA-------------------LVDMYMKVGKTEQGCSVFENMTTRN 216
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V+W A+I G V G + F +M + D +T+ + AS +GL + G+ +HA
Sbjct: 217 VVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHA 276
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++ + + + N L T Y+KC K +F KM D+VSW ++ Y+
Sbjct: 277 QTIKQGFNETAYVV----NTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMG 332
Query: 368 RLEEAKFIFREVPER----NLLTWTVMISG---LAESGFGEE 402
E A F+ + + N T+ +IS LA + +GE+
Sbjct: 333 DEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQ 374
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 173/355 (48%), Gaps = 31/355 (8%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG------HAAV 124
+F+R ++S + A +F+ + + YN M+++Y G + A+
Sbjct: 56 LFTRLLYFCSFSNYASFNYANNVFHM--IKYPELRVYNIMIRSYGCIEGGDDSNCCYKAL 113
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
L+ +M G P+ +F ++ S + + +H V+K+G + V N+L+S
Sbjct: 114 MLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISL 173
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
++ L +ARK+FDE + +D SW +M+ GY+RN ++ A L M
Sbjct: 174 FMNFG---------LSKNARKVFDE--MFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMN 222
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG----IQMDEYTYTSLISASFNTGLFN 300
+ WN++I+G V+ G +E+ + F +M + ++ D+ T S++SA G +
Sbjct: 223 GRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSID 282
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
G+ +HAY+ + ++ + + AL+ Y KCG + QA E+F+ MP +D +W A++
Sbjct: 283 HGKWVHAYLRKNDIECD----VVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMI 338
Query: 361 SGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
S + ++A F E+ + N +T+ ++S + SG E+ F+ MK
Sbjct: 339 SVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMK 393
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 149/348 (42%), Gaps = 57/348 (16%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T+ IHAH+L GF + N LI ++ A +FD+ D+ S +++ Y
Sbjct: 146 TVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGY 205
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK----RDGFAP 137
G V++A LF + R+ I++N+++ ++++F M+ D P
Sbjct: 206 LRNGEVEMALNLFR--KMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKP 263
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D + ++VL A +L+ + H + +H + K + C + L++ Y C
Sbjct: 264 DKITIASVLSACALLGSID-HGKWVHAYLRKNDIECDVVIGTALVNMYGKCGD------- 315
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
+ A ++F++ P +KD A AW AMIS
Sbjct: 316 --VQQAIEIFNDMP--EKD-------------------------------ASAWTAMISV 340
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQP 316
+ HG ++AFD F +M G++ + T+ L+SA ++GL GR + R ++P
Sbjct: 341 FALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEP 400
Query: 317 S-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
H+ ++ ++ +A + MP++ D+ W A+L G
Sbjct: 401 QIYHYA-----CMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGG 443
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 22/338 (6%)
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ YS + A LFN+ P T ++N +++ ++ +A+K+F+ ++R
Sbjct: 54 IKTYSNSFLTTYALSLFNSIPNP--TTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTL 111
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D +F +L A S + Q LH V K+G + V+N+L+ Y V
Sbjct: 112 DFHTFPLILKASSQLHSLSL-AQSLHSQVFKYGFLVDSFVMNSLIRVYS-------VNDR 163
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
V A K+F E+ +D S+ MI G+V+N L AR+L D M V W MI+G
Sbjct: 164 V--NDAYKVFCES--GYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAG 219
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
Y + L EA + F +M + D S++SA G GR +H Y+ R ++
Sbjct: 220 YSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITRNGIRVD 279
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIF 376
+ + L+ Y KCG + ARE F+ +D+ +WNA+L G+ I+ + L ++
Sbjct: 280 SY----LTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFS 335
Query: 377 REVPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
R V E + +T+ ++ G + +G E+ K+F++M+
Sbjct: 336 RMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEME 373
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 174/446 (39%), Gaps = 106/446 (23%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
I A I+T G + I + I +A LFDK P P+
Sbjct: 31 IQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPN---------------- 74
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
T ++NAM + Y N V LF + R P+ F+F ++
Sbjct: 75 -----------------TATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMII 117
Query: 147 ---GAMSLIAEEEWHCQQLHCDVVKWGVM-----------------CVPS---------- 176
G + + E E ++HC K G CV
Sbjct: 118 KSCGKLEGVREGE----EVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHE 173
Query: 177 ----VLNTLLSCYICCAS-----------------------STLVESPVLMASARKLFDE 209
V +++ YI C S +ES MA+AR+LFD+
Sbjct: 174 RNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKN-MAAARELFDK 232
Query: 210 APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 269
P +D SW M+ GY N ++ K+ D M +WN +I GYV++GL+ E +
Sbjct: 233 MP--NRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLE 290
Query: 270 TFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNAL 328
+F++M G + +++T +++SA G + G+ +H Y + + L V N L
Sbjct: 291 SFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGN----LFVGNVL 346
Query: 329 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNL 384
I Y KCG + A VF+ + +D++SWN I++G +A +F E E +
Sbjct: 347 IDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDG 406
Query: 385 LTWTVMISGLAESGFGEESLKLFNQM 410
+T+ ++S G ++ F M
Sbjct: 407 VTFVGILSACTHMGLVKDGFLYFKSM 432
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 147/361 (40%), Gaps = 61/361 (16%)
Query: 32 LTTGFRLTPLIRNR-------LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +G RL L R LI Y +S N+ A LFDK PN D S +L+ Y+
Sbjct: 192 VVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVN 251
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPFSFS 143
G V++ EK+F+ P R+ S+N ++ Y N ++ F RM +G P+ F+
Sbjct: 252 GEVEMFEKVFDEMPE--RNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLV 309
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
VL A S + + + +H G V N L+ Y C ++E+ V++ +
Sbjct: 310 AVLSACSRLGALDMG-KWVHVYAESIGYKGNLFVGNVLIDMYAKCG---VIENAVVVFNC 365
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
L +KD SW N +I+G HG
Sbjct: 366 --------LDRKDIISW-------------------------------NTIINGLAIHGH 386
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEHFI 321
+A F +M S G + D T+ ++SA + GL G ++ ++V EH+
Sbjct: 387 APDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY- 445
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVP 380
++ + G L QA KMP+ D V W A+L + +E A+ + +
Sbjct: 446 ----GCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLI 501
Query: 381 E 381
E
Sbjct: 502 E 502
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 159/341 (46%), Gaps = 57/341 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L+ A S + A LF+ ++ +S+ AM+ N AV LF +M+R+G
Sbjct: 334 TALMVALSKCKEMDDALSLFSLMEEG-KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ F++S +L + E +H +V+K SV LL Y+ ++
Sbjct: 393 VKPNHFTYSAILTVHYPVFVSE-----MHAEVIKTNYERSSSVGTALLDAYVKLGNTI-- 445
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
A K+F+ + KD +W+ M+AGY +
Sbjct: 446 -------DAVKVFE--IIEAKDLMAWSAMLAGYAQT------------------------ 472
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN-TGLFNCGRQLHAYVLRTV 313
G EEA F ++ GI+ +E+T++S+I+A + T G+Q HAY ++
Sbjct: 473 -------GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMR 525
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+ + L V++AL+T Y K G + A EVF + RDLVSWN+++SGY + ++A
Sbjct: 526 LNNA----LCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKAL 581
Query: 374 FIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+F E+ +RN+ +T+ +I+ +G E+ K FN M
Sbjct: 582 EVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSM 622
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 84/319 (26%)
Query: 56 IPY-AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAY 114
+P+ AH+LFDK P+ P TL++ +N ++ +Y
Sbjct: 40 VPHIAHNLFDKIPH----------------------------RPTTLKE---HNQLLFSY 68
Query: 115 SHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLG--AMSLIAEEEWHCQQLHCDVVKWGVM 172
S + A+ LFV + PD + S V A SL + +Q+HC VK+G++
Sbjct: 69 SRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKL---GRQVHCQCVKFGLV 125
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
SV +L+ Y+ + + R++FDE + +++ SWT+++AGY
Sbjct: 126 DHVSVGTSLVDMYMKTEN---------VNDGRRVFDE--MGERNVVSWTSLLAGY----- 169
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+WN GLY ++ F +M G+ + YT +++I+A
Sbjct: 170 -----------------SWN---------GLYGYVWELFCQMQYEGVLPNRYTVSTVIAA 203
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
N G+ G Q+HA V++ + + + V N+LI+ Y++ G L AR+VFDKM +RD
Sbjct: 204 LVNEGVVGIGLQVHAMVVKHGFEEA----IPVFNSLISLYSRLGMLRDARDVFDKMEIRD 259
Query: 353 LVSWNAILSGYI-NARRLE 370
V+WN++++GY+ N + LE
Sbjct: 260 WVTWNSMIAGYVRNGQDLE 278
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 153/390 (39%), Gaps = 112/390 (28%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +H + G + L+D+Y K+ N+ +FD+ ++ S T+LL+ YS
Sbjct: 111 LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYS 170
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G L G+ +LF +M+ +G P+ ++
Sbjct: 171 WNG--------------------------------LYGYVW-ELFCQMQYEGVLPNRYTV 197
Query: 143 STVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
STV+ A L+ E Q+H VVK G
Sbjct: 198 STVIAA--LVNEGVVGIGLQVHAMVVKHG------------------------------- 224
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
F+EA P + ++I+ Y R L AR + D M V WN+MI+GYVR+
Sbjct: 225 -----FEEAI------PVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G E F+ F KM G++ T+ S+I + + + + L++ + I
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVI 333
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
AL+ +KC ++ A +F M EE K
Sbjct: 334 ----TALMVALSKCKEMDDALSLFSLM---------------------EEGK-------- 360
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
N+++WT MISG ++G ++++ LF+QM+
Sbjct: 361 -NVVSWTAMISGCLQNGGNDQAVNLFSQMR 389
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T LL AY GN A K+F + +D ++++AM+ Y+ + A KLF ++ ++G
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEI--IEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG 489
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW---GVMCVPSVLNTLLSCYICCASS 191
P+ F+FS+V+ A + +Q H +K +CV S L T+ +
Sbjct: 490 IKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYA-------- 541
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ SA ++F ++D SW +MI+G
Sbjct: 542 ----KRGNIDSAHEVFKRQ--KERDLVSWNSMISG------------------------- 570
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAYVL 310
Y +HG ++A + F +M + +D T+ +I+A + GL G++ ++ +
Sbjct: 571 ------YSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMIN 624
Query: 311 RTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ P+ +H+ + +I Y++ G L +A + ++MP
Sbjct: 625 DHHINPTMKHY-----SCMIDLYSRAGMLEKAMGIINEMP 659
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 142/325 (43%), Gaps = 51/325 (15%)
Query: 60 HHLFDKTPN--PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
H F KT N +F T + Y G+ A K+F+ ++ R ++NAM+ A
Sbjct: 69 HAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD--KMSERTIFTWNAMIGACVSA 126
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
A++L+ M+ G + D F+F VL A E C+ +H VK G V
Sbjct: 127 GRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCE-IHGVAVKCGYGGFVFV 185
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N L++ Y C + AR LFD +G + DD
Sbjct: 186 CNALIAMYAKCGD---------LGGARVLFD----------------SGLMEKDD----- 215
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
V+WN++IS +V G EA FR+M +G++ + YT+ S + A
Sbjct: 216 ----------PVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFI-LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
GR +HA +L+ S HF + V+NALI Y CG++ A VF M +D VSW
Sbjct: 266 FIKIGRGIHAVILK-----SNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSW 320
Query: 357 NAILSGYINARRLEEAKFIFREVPE 381
N +LSG + +A F+++ +
Sbjct: 321 NTLLSGMVQNDMYSDAINHFQDMQD 345
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 47/340 (13%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F L++ Y+ G++ A LF++ + D +S+N+++ A+ + A+ LF RM
Sbjct: 183 VFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRM 242
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+ G + ++F + L A C+ + G+ V N Y+ A
Sbjct: 243 QEVGVESNTYTFVSALQA----------CEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ + M A ++F KD SW T+++G V+ND
Sbjct: 293 IAMYANCGQMEDAERVFKSMLF--KDCVSWNTLLSGMVQND------------------- 331
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+Y +A + F+ M G + D+ + ++I+AS + G ++HAY +
Sbjct: 332 ------------MYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAI 379
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + + H + N+LI Y KC + F+ MP +DL+SW I++GY
Sbjct: 380 KHGIDSNMH----IGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHL 435
Query: 371 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+A + R+V + +MI + + G +S KL ++
Sbjct: 436 DALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEI 475
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 167/414 (40%), Gaps = 89/414 (21%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ L++ Y+ G ++ AE++F + + +D +S+N ++ N A+ F
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKS--MLFKDCVSWNTLLSGMVQNDMYSDAINHFQD 342
Query: 130 MKRDGFAPDPFSFSTVLGA----MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
M+ G PD S ++ A +L+A E +H +K G+ + N+L+ Y
Sbjct: 343 MQDSGQKPDQVSVLNMIAASGRSANLLAGME-----VHAYAIKHGIDSNMHIGNSLIDMY 397
Query: 186 --ICCA-----------SSTLVESPVLMAS---------ARKLFDEAPLSQKD------- 216
CC L+ ++A A L + L + D
Sbjct: 398 GKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG 457
Query: 217 ----------EPSWTTMIAGYVRNDDLAS-------------------ARKLLDGMTHPI 247
I GYV LA AR + + +
Sbjct: 458 SILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKD 517
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V+W +MI+ V +GL EA + F + I+ D T S++ A+ G+++H
Sbjct: 518 IVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHG 577
Query: 308 YVLRTVVQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
+++R + F L + N+L+ Y +CG + AR +F+ + RDL+ W ++ IN
Sbjct: 578 FLIR------KGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSM----IN 627
Query: 366 ARRL----EEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
A + ++A +F ++ + N+L T+ ++ + SG E + F MK
Sbjct: 628 ANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMK 681
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSV--NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G+QLHA+ L+T ++++ SV + + Y KCG A +VFDKM R + +WNA+
Sbjct: 65 GQQLHAHFLKT-----QNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAM 119
Query: 360 LSGYINARRLEEAKFIFREV 379
+ ++A R EA +++E+
Sbjct: 120 IGACVSAGRYVEAIELYKEM 139
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 163/356 (45%), Gaps = 25/356 (7%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
HH DKT F T S + +A +F+ P L + ++ ++S
Sbjct: 86 HHSHDKTN----FLHTGFQPNGSDSITFDVACNMFDEMPELLTVGL-VTEIITSFSKQSR 140
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
A+ LF RM P+ F+F TVL + + + +Q+H +K + V +
Sbjct: 141 HEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVG-KQIHGCAIKTSLCSNVFVGS 199
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
L+ Y+ +S + A+K F++ + S+TT+I GY+++ A ++
Sbjct: 200 ALVDLYVKLSS---------IEEAQKAFEDT--EYPNVVSYTTLIGGYLKSGRFEDALRV 248
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
+ M ++WNAM+ G + G EEA F M G +E T+ ISA+ N
Sbjct: 249 FNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASL 308
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
GR HA ++ + + ++ V N+LI+FY KCG + + +FDK+ R++VSWNA+
Sbjct: 309 GFGRSFHACAIKFLGKLNDF----VGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAV 364
Query: 360 LSGYINARRLEEAKFIFREVPERNLLTWTVMISGL----AESGFGEESLKLFNQMK 411
+ GY + R EA +F + + V + GL +G +E FN+ +
Sbjct: 365 ICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKAR 420
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 145/348 (41%), Gaps = 63/348 (18%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ + IH + T + + L+D+Y K S+I A F+ T P++ S TTL+ Y
Sbjct: 178 VGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYL 237
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+G + A ++FN P R+ IS+NAMV S AVK F+ M R+GF P+ +F
Sbjct: 238 KSGRFEDALRVFNEMPE--RNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTF 295
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ A S IA + + H +K+ V N+L+S Y C S M
Sbjct: 296 PCAISAASNIASLGFG-RSFHACAIKFLGKLNDFVGNSLISFYAKCGS---------MKD 345
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
+ +FD+ + +++ SW +I GY N G
Sbjct: 346 SLLIFDK--ICKRNVVSWNAVICGYAHN-------------------------------G 372
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL-------FNCGRQLHAYVLRTVVQ 315
EA F +M S GI+ ++ + L+ A + GL FN R +L+
Sbjct: 373 RGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLK---- 428
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 362
EH+ ++ + G+ +A+ +MP + W AIL G
Sbjct: 429 -PEHYA-----CMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGG 470
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 180/402 (44%), Gaps = 31/402 (7%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HA + T G+ LI + LI +Y + A LFDK P +I L++ +
Sbjct: 48 GKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCAR 107
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMV-----KAYSHNLDGHAAVKLFVRMKRDGFAPD 138
G A ++F+ TL D S + V KA H D ++ + + F D
Sbjct: 108 CGFHDHALEVFSEMQ-TLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEID 166
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
F S ++ S E + VVK V +N ++S Y A L +
Sbjct: 167 AFVSSALIVMYSKCGEVRDARKVFDGMVVKDLV-----AMNAVVSGY---AQQGLPNEAL 218
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAM 254
+ KL P + +W +I+G+ + D ++ M P V+W ++
Sbjct: 219 SLVENMKLMGVNP----NVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSV 274
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
+SG+V++ EEAFD F+KM +G T ++L+ A G+++H Y L V
Sbjct: 275 LSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGV 334
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ L V +AL+ Y KCG + +AR +F KMP ++ V+ N+++ GY N EEA
Sbjct: 335 EDD----LYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIE 390
Query: 375 IFRE-----VPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F + VP+ + LT+T ++ + G E +LF M+
Sbjct: 391 LFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQ 432
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 157/374 (41%), Gaps = 45/374 (12%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG- 85
+H +L F + + + LI +Y K + A +FD D+ + ++S Y+ G
Sbjct: 154 VHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGL 213
Query: 86 ---NVKLAE--KLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
+ L E KL P + +++NA++ ++ D ++F M D PD
Sbjct: 214 PNEALSLVENMKLMGVNP----NVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVV 269
Query: 141 SFSTVL-GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES-PV 198
S+++VL G + EE +L C S+T+ P
Sbjct: 270 SWTSVLSGFVQNFRNEE-----------------AFDAFKKMLLLGFCPTSATISALLPA 312
Query: 199 LMASARKLFDEAPLS-------QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
AR F + + D + ++ Y + ++ AR L M V
Sbjct: 313 CATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTM 372
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
N+MI GY HG EEA + F +M G+ ++D T+T+ ++A + G G++L +
Sbjct: 373 NSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQ 432
Query: 311 -RTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINAR 367
+ ++P EH+ ++ + + GKL +A + MPV+ DL W A+L+ N
Sbjct: 433 EKYCIEPRLEHYA-----CMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHG 487
Query: 368 RLEEAKFIFREVPE 381
+E A+ + + E
Sbjct: 488 HVELAEVAAKHLSE 501
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 164/355 (46%), Gaps = 19/355 (5%)
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
P F L+ Y+ G ++ A K++ + +D +++NAMV YS N A+ L
Sbjct: 38 PVSGFFVGNALVDMYAKCGKMEDASKVYE--RMRFKDVVTWNAMVTGYSQNGRFEDALSL 95
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
F +M+ + D ++S+V+ S A+ + C+ + G C P+V+ TL+S
Sbjct: 96 FGKMREERIELDVVTWSSVI---SGYAQRGFGCEAMDVFRQMCGCSCRPNVV-TLMSLLS 151
Query: 187 CCAS-STLVESPVLMASARK--LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
CAS L+ + K L E D +I Y + L AR + D +
Sbjct: 152 GCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEI 211
Query: 244 --THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG--IQMDEYTYTSLISASFNTGLF 299
V W MI GY ++G A F +M I +++T + ++ A
Sbjct: 212 CPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAAL 271
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G+Q+HAYVLR S+ +L V N LI Y+K G + A+ VFD M R+ +SW ++
Sbjct: 272 RFGKQIHAYVLRRSRIDSD--VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSL 329
Query: 360 LSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
L+GY E+A +F E+ + L +T+ V++ + SG + + LF +M
Sbjct: 330 LTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRM 384
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 143/319 (44%), Gaps = 51/319 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N D+ L+ Y+ ++++A +F+ RD +++ M+ Y+ D + A++LF
Sbjct: 182 NDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLF 241
Query: 128 VRMKR--DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
M + + P+ F+ S VL A + +A + +Q+H V++
Sbjct: 242 SEMFKFDNCIVPNDFTISCVLMACARLAALRFG-KQIHAYVLR----------------- 283
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
+ ++S VL + +I Y ++ D+ +A+ + D M+
Sbjct: 284 -----RSRIDSDVLFVA------------------NCLIDMYSKSGDVDTAQVVFDSMSK 320
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
A++W ++++GY HG E+AF F +M + +D T+ ++ A ++G+ + G L
Sbjct: 321 RNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDL 380
Query: 306 HAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSG 362
+ + VV P EH+ + + + G+L +A + + M + V W A+LS
Sbjct: 381 FYRMSKDFVVDPGVEHYA-----CMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSA 435
Query: 363 YINARRLEEAKFIFREVPE 381
+E A+F +++ E
Sbjct: 436 CRTHSNVELAEFAAKKLLE 454
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 175/406 (43%), Gaps = 75/406 (18%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
F T L++ S G + A KLF+ P D +NA+++ YS N ++++ MK
Sbjct: 80 FLMTKLVNQSSNLGQIFYARKLFDEFPDP--DLFMWNAIIRTYSRNNMYRNVIEMYRWMK 137
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA-- 189
G PD F+F VL A S + + C +H V+ +G V N L++ Y C
Sbjct: 138 WVGLHPDKFTFPCVLKACSELLDFGLSCL-VHAHVIVYGFGSHVFVQNGLVALYAKCGRI 196
Query: 190 -----------SSTLVESPVLMAS---------ARKLFDEAPLSQKD-EPSWTTMIA--- 225
T+V +++ A ++FD+ + + D +P W ++++
Sbjct: 197 GMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQ--MRKTDVKPDWISLVSVMR 254
Query: 226 GYVRNDDLASARKL-----------------------------------LDGMTHPIAVA 250
Y DDL R L D M P V
Sbjct: 255 AYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVM 314
Query: 251 -WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNAMISGY ++G EEA + F+ M S I+ D T S + A G + + YV
Sbjct: 315 MWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYV 374
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ + VN LI Y KCG + AR VFD+ V+D+V W+A++ GY +
Sbjct: 375 RKSKYGGD----IFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQG 430
Query: 370 EEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
EA +++ + + N +T+ +++ + SG ++ +LF+ M+
Sbjct: 431 WEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCMR 476
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 157/369 (42%), Gaps = 35/369 (9%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L+ +HAH++ GF ++N L+ +Y K I A +FD+ + I S T ++S Y
Sbjct: 163 LSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYG 222
Query: 83 AAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP- 139
G A ++F+ T D IS ++++AY+ D L + + G +P
Sbjct: 223 QNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPD 282
Query: 140 -----FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC-----------VPSVLNTLLS 183
+F G ++ +A+ + + V+ W M + ++S
Sbjct: 283 LLISLTAFYAKCGEVT-VAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMIS 341
Query: 184 CYICCASSTLVESPVLMASARKL-----FDEAPLSQK---DEPSWTTMIAGYVRNDDLAS 235
I S TL + + A L D+ K D TT+I Y + + S
Sbjct: 342 RNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVES 401
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
AR + D + V W+AMI GY HG EA + M G+ ++ T+ L++A +
Sbjct: 402 ARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSH 461
Query: 296 TGLFNCGRQLHAYVLRTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
+GL G +L + ++P +EH+ + ++ + G L QA KMP+ V
Sbjct: 462 SGLIKQGWELFHCMRDFGIKPRNEHY-----SCVVDLLGRAGYLKQAYVFILKMPIEPGV 516
Query: 355 S-WNAILSG 362
S W A+LS
Sbjct: 517 SVWGALLSA 525
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 186/430 (43%), Gaps = 57/430 (13%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IH ++ G + ++ + L+ +Y K + A LFD+ P+ D+ T++S Y
Sbjct: 123 VLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCY 182
Query: 82 SAAGNVKLAEKLFNATPVTLR------DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+G + A + F +R D+++ + + + LD ++ + GF
Sbjct: 183 YQSGKFEEALRYFG----MMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGF 238
Query: 136 APDPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVKW------------GVMCV----- 174
D F + ++ + E Q + VV W G+ C+
Sbjct: 239 RMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKR 298
Query: 175 -------PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW---TTMI 224
P++ + C S+ L+E K + + +P ++++
Sbjct: 299 MYSEGVKPTLTTLTSTLMACSQSAQLLEG--------KFVHGYIIRNRIQPDIFLNSSLM 350
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
Y + + SA + M V+WN MISGYV G +A F +M ++ D
Sbjct: 351 DLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAI 410
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+TS+++A GR++H ++ + +E V AL+ Y KCG + +A V
Sbjct: 411 TFTSVLAACSQLAALEKGREIHNLIVERNLGNNE----VVMGALLDMYAKCGAVEEAFGV 466
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFG 400
F +P RDLVSW ++++ Y + R+ EA +F E+ + N+ +T+ ++S + +G
Sbjct: 467 FKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLV 526
Query: 401 EESLKLFNQM 410
++ L FNQM
Sbjct: 527 DDGLYHFNQM 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 37/200 (18%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW-NAMISGYVRHGLYEEAFDTFR 272
Q D +I+ YV + A+ + D + +P ++ N +++GY R+ +Y+EA F
Sbjct: 35 QNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFD 94
Query: 273 KMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
K+ ++ D YTY S++ A G+ +H +V+ + V ++L+
Sbjct: 95 KLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHT----CLVKEGLMVDIVVGSSLVGM 150
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 391
Y KC + A ++FD E+P++++ W +I
Sbjct: 151 YAKCNEFECAVKLFD-------------------------------EMPDKDVACWNTVI 179
Query: 392 SGLAESGFGEESLKLFNQMK 411
S +SG EE+L+ F M+
Sbjct: 180 SCYYQSGKFEEALRYFGMMR 199
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 186/430 (43%), Gaps = 57/430 (13%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IH ++ G + ++ + L+ +Y K + A LFD+ P+ D+ T++S Y
Sbjct: 123 VLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCY 182
Query: 82 SAAGNVKLAEKLFNATPVTLR------DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+G + A + F +R D+++ + + + LD ++ + GF
Sbjct: 183 YQSGKFEEALRYFG----MMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGF 238
Query: 136 APDPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVKW------------GVMCV----- 174
D F + ++ + E Q + VV W G+ C+
Sbjct: 239 RMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKR 298
Query: 175 -------PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW---TTMI 224
P++ + C S+ L+E K + + +P ++++
Sbjct: 299 MYSEGVKPTLTTLTSTLMACSQSAQLLEG--------KFVHGYIIRNRIQPDIFLNSSLM 350
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
Y + + SA + M V+WN MISGYV G +A F +M ++ D
Sbjct: 351 DLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAI 410
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+TS+++A GR++H ++ + +E V AL+ Y KCG + +A V
Sbjct: 411 TFTSVLAACSQLAALEKGREIHNLIVERNLGNNE----VVMGALLDMYAKCGAVEEAFGV 466
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFG 400
F +P RDLVSW ++++ Y + R+ EA +F E+ + N+ +T+ ++S + +G
Sbjct: 467 FKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLV 526
Query: 401 EESLKLFNQM 410
++ L FNQM
Sbjct: 527 DDGLYHFNQM 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 37/200 (18%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW-NAMISGYVRHGLYEEAFDTFR 272
Q D +I+ YV + A+ + D + +P ++ N +++GY R+ +Y+EA F
Sbjct: 35 QNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFD 94
Query: 273 KMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
K+ ++ D YTY S++ A G+ +H +V+ + V ++L+
Sbjct: 95 KLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHT----CLVKEGLMVDIVVGSSLVGM 150
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 391
Y KC + A ++FD E+P++++ W +I
Sbjct: 151 YAKCNEFECAVKLFD-------------------------------EMPDKDVACWNTVI 179
Query: 392 SGLAESGFGEESLKLFNQMK 411
S +SG EE+L+ F M+
Sbjct: 180 SCYYQSGKFEEALRYFGMMR 199
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 174/409 (42%), Gaps = 90/409 (22%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLT-PLIRNRLI-DIYCKSSNIPYAHHLFDKTPN 68
+A L + ++++ + IHA + L P I LI I S+ + YAH++F N
Sbjct: 43 IALLQNCASSKQKLKQIHAFSIRHNVPLNNPDIGKYLIFTIVSLSAPMSYAHNVFTLLYN 102
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNAT--PVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
P++F+ T++ Y+ + N A L+ DT +Y ++KA S +L+
Sbjct: 103 PNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLN------- 155
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
RDG + +H V+ G + V N+LL Y
Sbjct: 156 ----VRDG-------------------------EMIHSVTVRNGFESLIFVRNSLLHIYA 186
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
C D SA K+ + M
Sbjct: 187 ACG------------------------------------------DTESAYKVFELMGER 204
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
VAWN++I+G+ +G EA FR+M G++ D +T SL SA G GR++H
Sbjct: 205 DLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVH 264
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
Y+L+ + + H VNN+L+ FY KCG + +A++VF +M R++VSW +++ G
Sbjct: 265 VYLLKVGLTGNLH----VNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVN 320
Query: 367 RRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
EEA +F+E+ + + +T+ ++ + G +E F +MK
Sbjct: 321 GFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMK 369
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 135/341 (39%), Gaps = 90/341 (26%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH+ + GF +RN L+ I Y+A G+
Sbjct: 162 IHSVTVRNGFESLIFVRNSLLHI-------------------------------YAACGD 190
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+ A K+F + RD +++N+++ ++ N + A+ LF M G PD F+ ++
Sbjct: 191 TESAYKVFEL--MGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLF 248
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A + + E +++H ++K G+ V N+LL Y C S + A+++
Sbjct: 249 SACAELGALELG-RRVHVYLLKVGLTGNLHVNNSLLDFYAKCGS---------IREAQQV 298
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F E +S+++ SWT+++ G N G EE
Sbjct: 299 FSE--MSERNVVSWTSLVVGLAVN-------------------------------GFGEE 325
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-----RQLHAYVLRTVVQPSEHFI 321
A F++M I E T+ ++ A + G+ + G R Y +R + EH+
Sbjct: 326 ALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRI---EHY- 381
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++ ++ G + +A E MP++ + V W +L
Sbjct: 382 ----GCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLG 418
>Medtr6g016020.1 | PPR containing plant-like protein | HC |
chr6:5715947-5718139 | 20130731
Length = 730
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 167/394 (42%), Gaps = 60/394 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ +HA ++ +GF ++ L+D Y K + AH+ FD+
Sbjct: 327 SCGECVHAKVIRSGFESDVVVGTALVDFYAKFEKLISAHYCFDQ---------------- 370
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ ++ +S+NA++ YS N+ ++ L M R G P+ FS
Sbjct: 371 -----------------IEEKNVVSWNALMLGYS-NVCSSTSILLLREMFRSGCFPNEFS 412
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
FS VL + S++ +QLH V++ G VL++L+ Y E L+
Sbjct: 413 FSAVLKSSSVL-----DLRQLHGLVIRMGYENHEYVLSSLVVAY---------ERNGLIN 458
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAG-YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
E PS +IAG Y R KLL P V+WN IS R
Sbjct: 459 EVLSFVQEFNNPLHVIPS--NIIAGIYNRTGLYNETMKLLSLQERPDVVSWNIAISACAR 516
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
Y E F+ F++MHS + D+YT+ + + A + G H +++T + F
Sbjct: 517 SNNYNEVFELFKRMHSAHVHPDKYTFVTGLCACTKICSLDLGSSFHGLIVKT--NSCDTF 574
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
V N LI Y KCGK+ + +VF+++ R++++W A++S +A IF +
Sbjct: 575 ---VGNVLIDMYGKCGKIESSVKVFEEITDRNVITWTALISALGLNSYARDAVKIFNNMV 631
Query: 381 ----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + L ++S G E +++F QM
Sbjct: 632 LIGFKPDTLALRAVLSSCRYGGLVSEGMEIFKQM 665
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 69/348 (19%)
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
PN IF ++++Y + N LA KLF+ P R +SYNA++KAYS + D + A +L
Sbjct: 38 PNQSIFINNNIITSYISYNNFILARKLFDVMP--QRTLVSYNALIKAYSRSGDVNEAWRL 95
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
+ GF P+ ++ + +L
Sbjct: 96 VNELMVCGFGPNQYTLTGLL---------------------------------------- 115
Query: 187 CCASSTLVESPVLMASARK--LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
CC L + L + K +FD D + ++ + R L A + D M
Sbjct: 116 CCEGLKLFQGYQLFGLSVKNGVFD------VDAFVGSALLGFFGRCGCLDEAFSVFDDMK 169
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC--- 301
V WN M+S +G E+ F ++ +G+ + E ++ +++S G+ C
Sbjct: 170 CKSLVTWNTMLSLLSCNGFVEDVKVLFCELLRLGVFLSEGSFVAVLS-----GIGGCEED 224
Query: 302 ---GRQLHAYVLRTVVQPSEHFILSVN--NALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G Q+H + ++ F VN N+LI Y +C L A +F+++PV+++VSW
Sbjct: 225 LSYGEQVHCLMTKS------GFDCYVNAVNSLIGVYVRCRALCSAERLFEQVPVQNVVSW 278
Query: 357 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
N I+ + R + A ++ + R L+ G+ ES G +L
Sbjct: 279 NMIIDSMVKNGRSQMALEVYLNMLRRGLVPSQATFVGVIESCIGLRNL 326
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 144/357 (40%), Gaps = 41/357 (11%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT 100
I N +I Y +N A LFD P + S L+ AYS +G+V A +L N V
Sbjct: 43 FINNNIITSYISYNNFILARKLFDVMPQRTLVSYNALIKAYSRSGDVNEAWRLVNELMVC 102
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLG----------AM 149
Y L +LF ++G F D F S +LG A
Sbjct: 103 GFGPNQYTLTGLLCCEGLKLFQGYQLFGLSVKNGVFDVDAFVGSALLGFFGRCGCLDEAF 162
Query: 150 SLIAEEE------WH--------------CQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
S+ + + W+ + L C++++ GV +LS C
Sbjct: 163 SVFDDMKCKSLVTWNTMLSLLSCNGFVEDVKVLFCELLRLGVFLSEGSFVAVLSGIGGCE 222
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
V + FD + ++I YVR L SA +L + + V
Sbjct: 223 EDLSYGEQVHCLMTKSGFDCYV------NAVNSLIGVYVRCRALCSAERLFEQVPVQNVV 276
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN +I V++G + A + + M G+ + T+ +I + +CG +HA V
Sbjct: 277 SWNMIIDSMVKNGRSQMALEVYLNMLRRGLVPSQATFVGVIESCIGLRNLSCGECVHAKV 336
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
+R+ + + V AL+ FY K KL+ A FD++ +++VSWNA++ GY N
Sbjct: 337 IRSGFESD----VVVGTALVDFYAKFEKLISAHYCFDQIEEKNVVSWNALMLGYSNV 389
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+I Y+ ++ ARKL D M V++NA+I Y R G EA+ ++ G
Sbjct: 46 NNIITSYISYNNFILARKLFDVMPQRTLVSYNALIKAYSRSGDVNEAWRLVNELMVCGFG 105
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
++YT T L+ LF G QL ++ V + F V +AL+ F+ +CG L +
Sbjct: 106 PNQYTLTGLLCCE-GLKLFQ-GYQLFGLSVKNGVFDVDAF---VGSALLGFFGRCGCLDE 160
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL-LTWTVMISGLAESGF 399
A VFD M + LV+WN +LS +E+ K +F E+ + L+ ++ L+ G
Sbjct: 161 AFSVFDDMKCKSLVTWNTMLSLLSCNGFVEDVKVLFCELLRLGVFLSEGSFVAVLSGIGG 220
Query: 400 GEESLKLFNQM 410
EE L Q+
Sbjct: 221 CEEDLSYGEQV 231
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 163/387 (42%), Gaps = 90/387 (23%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H H+ GF+ ++ L+D+Y K S I A +FD+ P + S
Sbjct: 32 LHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVS------------- 78
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+N+++ AY H A+ L M GF P +F ++L
Sbjct: 79 --------------------WNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSIL 118
Query: 147 GAMSLIA---EEEWHCQQLHCDVVKWGVMCVP-SVLNTLLSCYICCASSTLVESPVLMAS 202
S E W +HC V+K G++C S+ N+L+ Y M
Sbjct: 119 SGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQ---------MDE 169
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
ARK+FD + +K SWTT++ GYV+ A KL + M H G
Sbjct: 170 ARKVFD--FMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQ-------------NIG 214
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
L F F + S IQ+ E L+++S ++ + CG H
Sbjct: 215 L---DFIVFVNLVSGCIQLRE----QLLASSVHSLVLKCGC---------------HEED 252
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-- 380
S+ N L+T Y +CG L AR +FD + + ++SW ++++GY ++RR +EA +FR +
Sbjct: 253 SIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMT 312
Query: 381 --ERNLLTWTVMISGLAESG---FGEE 402
+ N T ++S A+ G GEE
Sbjct: 313 EIKPNRATLATVLSACADLGSLCIGEE 339
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 56/342 (16%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+L+ Y+ G + A K+F+ + + +S+ ++ Y AVKLF M+
Sbjct: 156 SLMGMYAQFGQMDEARKVFDF--MDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNI 213
Query: 136 APDPFSF-STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
D F + V G + L E+ +H V+K G S+ N LL+ Y C
Sbjct: 214 GLDFIVFVNLVSGCIQL--REQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCG----- 266
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+L SAR + D + ++W +M
Sbjct: 267 -------------------------------------NLTSARIIFDLIVRKSVLSWTSM 289
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I+GY +EA D FR+M I+ + T +++SA + G G ++ Y
Sbjct: 290 IAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENGF 349
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ L V +L+ Y+KCG + +AREVF+++ +DL W+++++ Y EA
Sbjct: 350 ETD----LQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAIS 405
Query: 375 IFREV--PER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F ++ ER + + +T ++ + SG E+ LK F M+
Sbjct: 406 LFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQ 447
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
MH + + +TY L + N G LH +V R Q V +L+ Y+
Sbjct: 1 MHHSSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTF----VQTSLVDMYS 56
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
KC + AR+VFD+MP R +VSWN+++S Y + +E+A + +E+
Sbjct: 57 KCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEM 102
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 169/376 (44%), Gaps = 54/376 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+H+ + T + + N L+ +Y K+ ++ +FD PD++S TT+LSA S
Sbjct: 73 FGNQLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAIS 132
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
++ A +F+ P +NA++ S N A +L M R D ++F
Sbjct: 133 RLSDIDYALHVFDKMPKCY--VAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTF 190
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+T+L ++ ++E + + +H VVK G + SV+N+L++ Y C +
Sbjct: 191 ATML-SLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGC---------VVD 240
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
K+F+E + G VRN V +NAMI G+V
Sbjct: 241 GYKVFEE--------------MEGGVRNH-----------------VTYNAMIDGFVSVE 269
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+E+AF FR MH + + E T+ S++S+ + G Q ++
Sbjct: 270 RFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCS---LRVGCQAQGLAIKMGFDCG---YT 323
Query: 323 SVNNALITFYTKCGKLVQAREVFDKM-PVRDLVSWNAILSGYINARRLEEAKFIF----R 377
+VNNA +T Y+ GK+ +AR VF+ M RDLVSWN ++S + E+A + R
Sbjct: 324 AVNNATMTMYSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRR 383
Query: 378 EVPERNLLTWTVMISG 393
E E + T+ ++S
Sbjct: 384 EGIEPDAFTYGSLLSA 399
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 156/338 (46%), Gaps = 57/338 (16%)
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
++ YS G V A +F + RD +S+N MV + A+ +++M+R+G P
Sbjct: 330 MTMYSFFGKVNEARSVFEIMEES-RDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEP 388
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D F++ ++L A + E +H + K G+ V VLN L
Sbjct: 389 DAFTYGSLLSASDSLQMVE----MIHSVLCKNGLNKVE-VLNAL---------------- 427
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
I+ Y RN + A ++ + + ++WN++ISG
Sbjct: 428 --------------------------ISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISG 461
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
+V +G + + F + + ++ + Y+ + +S T + G+Q+H Y+LR
Sbjct: 462 FVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSE 521
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+S+ NAL+T Y+KCG L ++ VF++M RD ++WNAI+S Y + +EA F
Sbjct: 522 ----ISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFE 577
Query: 378 EVP-----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + + T+T ++S + SG +++ ++F+ M
Sbjct: 578 AMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIM 615
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 22/263 (8%)
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
+ ++KLF ++ PD + ST + A S QLH +K + V N+
Sbjct: 37 YESLKLFTKI-HSSHKPDHCTLSTTITATSKTRHVTVFGNQLHSFAIKTALKAYSHVANS 95
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
LLS Y + LV S +FD+ + D SWTT+++ R D+ A +
Sbjct: 96 LLSLY--AKAHDLV-------SVELVFDD--IQCPDVYSWTTVLSAISRLSDIDYALHVF 144
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
D M WNA+I+G +G + AF + M M ++ D YT+ +++S + +
Sbjct: 145 DKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLD 204
Query: 301 CGRQLHAYVLRTVVQPSEHFI--LSVNNALITFYTKCGKLVQAREVFDKMP--VRDLVSW 356
GR +H+ V+++ F+ SV N+LIT Y CG +V +VF++M VR+ V++
Sbjct: 205 YGRHVHSVVVKS------GFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTY 258
Query: 357 NAILSGYINARRLEEAKFIFREV 379
NA++ G+++ R E+A +FR++
Sbjct: 259 NAMIDGFVSVERFEDAFLMFRDM 281
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
L S R D ++ + N ++ + + E+ F K+HS + D T ++ I+A
Sbjct: 5 LFSQRIWTDTFSNQQILKLNHKLTHLTKTNQFYESLKLFTKIHS-SHKPDHCTLSTTITA 63
Query: 293 SFNTGLFNC-GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ T G QLH++ ++T ++ H V N+L++ Y K LV VFD +
Sbjct: 64 TSKTRHVTVFGNQLHSFAIKTALKAYSH----VANSLLSLYAKAHDLVSVELVFDDIQCP 119
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
D+ SW +LS ++ A +F ++P+ + W +I+G +++G + + +L M
Sbjct: 120 DVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDM 178
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 200/440 (45%), Gaps = 52/440 (11%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
+AQ + + TL +++H HIL +G L ++LID Y K S I A LFD+ PN
Sbjct: 7 LIAQCTNKKSLTTL-KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNR 64
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNAT--PVTLRDTISYNAMVKAYS-----------H 116
I + +++S++ + G K A +L++ L D +++A+ KA+S H
Sbjct: 65 HIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAH 124
Query: 117 NL---------DGHAAVKL------FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH--- 158
L DG A + F +MK F D V+ +LI H
Sbjct: 125 GLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLD 184
Query: 159 --CQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS-STLVESPVLMASARKLFDEAPLSQK 215
++ D+V G P+ TL S + C + LV ++ K E+ ++
Sbjct: 185 GEALEVFEDMV--GSRIKPNEY-TLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVA-- 239
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
S T+++ Y + + + + K+ + + + V W + I G V++G E A FR+M
Sbjct: 240 ---SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMM 296
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
I + +T +S++ A + + G Q+HA ++ V ++ V+ ALI Y KC
Sbjct: 297 RCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKF----VDAALIHLYGKC 352
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMI 391
G + +AR VFD + D+VS N ++ Y EA +F + E N++T+ ++
Sbjct: 353 GNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISIL 412
Query: 392 SGLAESGFGEESLKLFNQMK 411
+G EE ++F+ ++
Sbjct: 413 LACNNAGLVEEGCQIFSLIR 432
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
YTSLI+ N + LH ++L+ S + LI Y KC + +AR++F
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILK-----SGSLFSFFGHKLIDGYIKCSVITEARKLF 58
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGE 401
D+MP R +V+WN+++S +++ + +EA ++ + +L T++ + +E G
Sbjct: 59 DEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSR 118
Query: 402 ESLK 405
E K
Sbjct: 119 EGQK 122
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 161/362 (44%), Gaps = 59/362 (16%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSH--N 117
H F K+ N FS+ +A S +G++ A L N P ++ YN +++AYSH N
Sbjct: 13 HAQFIKSQNQRNFSKLFTFAAQSPSGDLNYARLLLNTNPSL--NSYYYNTIIRAYSHTSN 70
Query: 118 LDGH-AAVKLFVRMKR---DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC 173
H A+ LF+ M + + PD F++S L + + + +QLH + K G
Sbjct: 71 PTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQ-QAKQLHGFINKMGFGF 129
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
+ N L+ Y S + E L
Sbjct: 130 DLYIQNALIHMY-----SEIGE-------------------------------------L 147
Query: 234 ASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 293
AR++ D M+H V+W +MI+G+V H L EA F++M +G+ ++E T S++
Sbjct: 148 VIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGC 207
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
++G + GR++H V + F +V ALI Y+KCG L AREVFD + RD+
Sbjct: 208 ADSGALSVGRKVHGIVKEKGID----FKANVCTALIHMYSKCGCLESAREVFDDVLDRDV 263
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQ 409
W A++ G +EA +F E+ N+ T V++S +G E FN
Sbjct: 264 FVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFND 323
Query: 410 MK 411
++
Sbjct: 324 VQ 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 65/300 (21%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ + L+ YS G + +A ++F+ ++ RD +S+ +M+ + ++ A++LF R
Sbjct: 130 DLYIQNALIHMYSEIGELVIARQVFDR--MSHRDVVSWTSMIAGFVNHHLTVEAIQLFQR 187
Query: 130 MKRDGFAPDPFSFSTVL------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
M G + + +VL GA+S+ +++H V + G+ +V L+
Sbjct: 188 MLEVGVDVNEATVISVLRGCADSGALSV-------GRKVHGIVKEKGIDFKANVCTALIH 240
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y C L SAR++ D +
Sbjct: 241 MYSKCGC------------------------------------------LESAREVFDDV 258
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
W AMI G HG+ +EA + F +M + ++ DE T ++SA N GL G
Sbjct: 259 LDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGY 318
Query: 304 QLHAYVL-RTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAIL 360
V R ++P+ +HF ++ K G L +A + + MP++ D V W ++
Sbjct: 319 MFFNDVQKRYSMKPNIKHF-----GCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLI 373
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 183/437 (41%), Gaps = 74/437 (16%)
Query: 7 ANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKT 66
+++F + L S T ++IHA I+ + +LI IY + YA+ +FD+
Sbjct: 39 SSIFSSLLREFSNTLIDVKSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQC 98
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAM--VKAYSHNLDGHAAV 124
P+ + ++ + K KLF + + SY + +KA + LD +
Sbjct: 99 PHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGM 158
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC-----------DVVKW---- 169
+L R GF P S+++ + C L+ DVV W
Sbjct: 159 ELVRMAVRKGFHLHPHVGSSMINFLV-------KCGNLNDARMVFDGMPERDVVCWNSII 211
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA--------------PLSQK 215
G +L ++ ++ S + S V MAS K E+ L
Sbjct: 212 GGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMG 271
Query: 216 DEP-SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
D+ T+++ Y D SA + + M ++WNAMISG V++G+ E+F F K+
Sbjct: 272 DDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKL 331
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
G D T SLI T G+ LHA ++R ++ + L ++ A++ Y+K
Sbjct: 332 VQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESN----LVLSTAIVDMYSK 387
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
CG + QA +V FR + +RN++TWT M+ GL
Sbjct: 388 CGAIKQASDV-------------------------------FRTMEKRNVITWTAMLVGL 416
Query: 395 AESGFGEESLKLFNQMK 411
+++G+ E +LKLF +M+
Sbjct: 417 SQNGYAEGALKLFCRMQ 433
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 172/416 (41%), Gaps = 52/416 (12%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF 94
GF L P + + +I+ K N+ A +FD P D+ +++ Y G +K +LF
Sbjct: 168 GFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLF 227
Query: 95 -NATPVTLR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLI 152
+R +++ +++KA + + V + G D F ++++ +
Sbjct: 228 VEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNV 287
Query: 153 AEEE-------WHCQQLHCDVVKWGVMCVPSVLN-----------------------TLL 182
+ E C + ++ W M V N TL+
Sbjct: 288 GDTESAFLVFNRMCSR---SLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLV 344
Query: 183 SCYICCA-SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
S C+ +S L VL A + E+ L T ++ Y + + A +
Sbjct: 345 SLIRGCSQTSDLENGKVLHACIIRKGLESNLVLS-----TAIVDMYSKCGAIKQASDVFR 399
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M + W AM+ G ++G E A F +M + + T SL+ + G
Sbjct: 400 TMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKK 459
Query: 302 GRQLHAYVLRTVVQPSEHFILSVN-NALITFYTKCGKLVQAREVF-DKMPVRDLVSWNAI 359
GR +H +++R + + +VN +ALI Y KCGK+ A ++F + ++D++ N++
Sbjct: 460 GRSVHGHLIRHGYEFN-----AVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSM 514
Query: 360 LSGYINARRLEEAKFIF-REVPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ GY + +A ++ R + ER N T+ M++ + SG EE LF+ M+
Sbjct: 515 IMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCME 570
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 161/351 (45%), Gaps = 59/351 (16%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P++ T LL AY+ G + A KLF+ P R+ S+N M+ +Y+HN A+ +F
Sbjct: 33 PNVILETDLLLAYTKLGLISHARKLFDKMPQ--RNMHSWNIMIASYTHNSMYFDALTVFE 90
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEE---EWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
KR G PD ++ + +S+ +E W C L VVK G + V N++L Y
Sbjct: 91 AFKRCGVLPDCYTLPPLF-KISIRIDECCLGWMCHGL---VVKLGYEEIVVVNNSVLEFY 146
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
+ C + M+ A +F S + P R+
Sbjct: 147 VKCGT---------MSQALSVF-----SNHNAP----------RD--------------- 167
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSLISASFNTGLFNCGR 303
+ WN MISG+ + GLY EA FR+M + GI++D T S++SA G +
Sbjct: 168 --SATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVK 225
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
++H +++R ++ + NALI Y KCG L + +F + +LV+W ++S Y
Sbjct: 226 EVHGFIVRNFGFDAD---APIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCY 282
Query: 364 INARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +E+ +F ++ + N +T T +++ + G ++ K+F M
Sbjct: 283 GMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSM 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
D P +I Y + L + + + + V W MIS Y HG +E+ F KM
Sbjct: 240 DAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMM 299
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYT 333
G + + T T+++++ + GL + G+++ ++ ++P+ EH+ ++ ++
Sbjct: 300 DEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLEPTAEHYA-----CMVDLFS 354
Query: 334 KCGKLVQAREVFDKMPVRDLVS--WNAILSGYI 364
+CG+L +A ++ ++M + W A+L+G +
Sbjct: 355 RCGRLEEALQLLERMKSSSVTGSMWGALLAGCV 387
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 57/348 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F T L+ YS G ++ AE LF+ D S+NAM+ ++ + + A++LF
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSL 490
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G D +F+ A + + +Q+H V+K V++ +L Y+ C
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQ-QGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ SARK+ + + P V
Sbjct: 550 ------------------------------------------EMKSARKVFNQIPSPDDV 567
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AW +ISG V +G E+A T+ +M G+Q DEYT+ +L+ A G+Q+HA +
Sbjct: 568 AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 310 LR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++ P F+++ +L+ Y KCG + A +F +M R + WNA++ G
Sbjct: 628 MKLNCAFDP---FVMT---SLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
EEA F E+ R + +T+ ++S + SG ++ K F+ M+
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ 729
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 152/369 (41%), Gaps = 83/369 (22%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPD 70
+A LNH L + IH ++ G+ + N I++Y K+ ++ YA +F
Sbjct: 307 VASLNHLE----LGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF------- 355
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
G +K D IS+N ++ + + +++LF+ +
Sbjct: 356 --------------GQMKEV------------DLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
R G PD F+ ++VL A S + E +Q+H +K G+ VL++ +S
Sbjct: 390 LRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGI-----VLDSFVS------- 437
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
T +I Y + + A L +
Sbjct: 438 ------------------------------TALIDVYSKGGKMEEAELLFHNQDGFDLAS 467
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNAM+ G+ Y EA F MH G + D+ T+ + A+ G+Q+HA V+
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ H+ L V + ++ Y KCG++ AR+VF+++P D V+W ++SG + E
Sbjct: 528 KMRF----HYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 371 EAKFIFREV 379
+A F + ++
Sbjct: 584 QALFTYHQM 592
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 65/344 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD------GH 121
NPD + L++ Y+ G++ A KLF+ TP + RD ++YNA++ AY+H + H
Sbjct: 45 NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTH 104
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A +F +++ + S + + L+ + L VK G+ V L
Sbjct: 105 EAFHIFRLLRQSVMLTTRHTLSPLF-KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR------------ 229
++ Y + AR LFD P+ +D W M+ YV
Sbjct: 164 VNIY---------AKFQRIREARVLFDRMPV--RDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 230 -------NDDLASARKLLDGMTHPI------------------------AVAWNAMISGY 258
D S R +L G+ WN +S Y
Sbjct: 213 AFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSY 272
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++ G EA D FR M + D TY ++S + G+Q+H V+R +
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF---GWD 329
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
F+ SV N+ I Y K G + AR +F +M DL+SWN ++SG
Sbjct: 330 QFV-SVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 144/346 (41%), Gaps = 38/346 (10%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L++ Y+ ++ A LF+ PV RD + +N M+KAY G + LF
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPV--RDVVLWNVMMKAYVEMGAGDEVLGLFSA 213
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS---VLNTLLSCYI 186
R G PD S T+L + E +Q+ K V S V N LS Y+
Sbjct: 214 FHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYL 273
Query: 187 ----------C----------CASSTLVESPVLMASARKL-FDEAPLSQKDEPSW----- 220
C C S T + ++AS L + W
Sbjct: 274 QAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVS 333
Query: 221 --TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
+ I YV+ + AR++ M ++WN +ISG R GL E + F + G
Sbjct: 334 VANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSG 393
Query: 279 IQMDEYTYTSLISASFNTGLFNC-GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
+ D++T TS++ A + C GRQ+H L+ + V+ ALI Y+K GK
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSF----VSTALIDVYSKGGK 449
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
+ +A +F DL SWNA++ G+ + EA +F + ER
Sbjct: 450 MEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERG 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 55/315 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + +L Y G +K A K+FN P D +++ ++ N + A+ + +
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSP--DDVAWTTVISGCVENGEEEQALFTYHQ 591
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD ++F+T++ A SL+ E +Q+H +++K P V+ +L+ Y C
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALE-QGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ A L M
Sbjct: 651 ------------------------------------------NIEDAYGLFRRMNTRSVA 668
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNAMI G +HG EEA + F +M S G+ D T+ ++SA ++GL + + +
Sbjct: 669 LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSM 728
Query: 310 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+T V+P EH+ + L+ ++ G + +A +V MP + L +NA
Sbjct: 729 QKTYGVEPEIEHY-----SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTL---LNAC 780
Query: 368 RLEEAKFIFREVPER 382
R++ K V E+
Sbjct: 781 RVQGDKETGERVAEK 795
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 38/217 (17%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
++ H +V G+ V N L++ Y C S + SARKLFD P S +D +
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGS---------LFSARKLFDITPQSDRDLVT 83
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+ ++A Y +L K TH EAF FR + +
Sbjct: 84 YNAILAAYAHTGELHDVEK-----TH--------------------EAFHIFRLLRQSVM 118
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+T + L G + L Y ++ +Q + + V AL+ Y K ++
Sbjct: 119 LTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQ----WDVFVAGALVNIYAKFQRIR 174
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+AR +FD+MPVRD+V WN ++ Y+ +E +F
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 57/348 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F T L+ YS G ++ AE LF+ D S+NAM+ ++ + + A++LF
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSL 490
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G D +F+ A + + +Q+H V+K V++ +L Y+ C
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQ-QGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ SARK+ + + P V
Sbjct: 550 ------------------------------------------EMKSARKVFNQIPSPDDV 567
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AW +ISG V +G E+A T+ +M G+Q DEYT+ +L+ A G+Q+HA +
Sbjct: 568 AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 310 LR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++ P F+++ +L+ Y KCG + A +F +M R + WNA++ G
Sbjct: 628 MKLNCAFDP---FVMT---SLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
EEA F E+ R + +T+ ++S + SG ++ K F+ M+
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ 729
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 152/369 (41%), Gaps = 83/369 (22%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPD 70
+A LNH L + IH ++ G+ + N I++Y K+ ++ YA +F
Sbjct: 307 VASLNHLE----LGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF------- 355
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
G +K D IS+N ++ + + +++LF+ +
Sbjct: 356 --------------GQMKEV------------DLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
R G PD F+ ++VL A S + E +Q+H +K G+ VL++ +S
Sbjct: 390 LRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGI-----VLDSFVS------- 437
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
T +I Y + + A L +
Sbjct: 438 ------------------------------TALIDVYSKGGKMEEAELLFHNQDGFDLAS 467
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNAM+ G+ Y EA F MH G + D+ T+ + A+ G+Q+HA V+
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ H+ L V + ++ Y KCG++ AR+VF+++P D V+W ++SG + E
Sbjct: 528 KMRF----HYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 371 EAKFIFREV 379
+A F + ++
Sbjct: 584 QALFTYHQM 592
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 65/344 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD------GH 121
NPD + L++ Y+ G++ A KLF+ TP + RD ++YNA++ AY+H + H
Sbjct: 45 NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTH 104
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A +F +++ + S + + L+ + L VK G+ V L
Sbjct: 105 EAFHIFRLLRQSVMLTTRHTLSPLF-KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR------------ 229
++ Y + AR LFD P+ +D W M+ YV
Sbjct: 164 VNIY---------AKFQRIREARVLFDRMPV--RDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 230 -------NDDLASARKLLDGMTHPI------------------------AVAWNAMISGY 258
D S R +L G+ WN +S Y
Sbjct: 213 AFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSY 272
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++ G EA D FR M + D TY ++S + G+Q+H V+R +
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF---GWD 329
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
F+ SV N+ I Y K G + AR +F +M DL+SWN ++SG
Sbjct: 330 QFV-SVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 144/346 (41%), Gaps = 38/346 (10%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L++ Y+ ++ A LF+ PV RD + +N M+KAY G + LF
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPV--RDVVLWNVMMKAYVEMGAGDEVLGLFSA 213
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS---VLNTLLSCYI 186
R G PD S T+L + E +Q+ K V S V N LS Y+
Sbjct: 214 FHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYL 273
Query: 187 ----------C----------CASSTLVESPVLMASARKL-FDEAPLSQKDEPSW----- 220
C C S T + ++AS L + W
Sbjct: 274 QAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVS 333
Query: 221 --TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
+ I YV+ + AR++ M ++WN +ISG R GL E + F + G
Sbjct: 334 VANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSG 393
Query: 279 IQMDEYTYTSLISASFNTGLFNC-GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
+ D++T TS++ A + C GRQ+H L+ + V+ ALI Y+K GK
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSF----VSTALIDVYSKGGK 449
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
+ +A +F DL SWNA++ G+ + EA +F + ER
Sbjct: 450 MEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERG 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 55/315 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + +L Y G +K A K+FN P D +++ ++ N + A+ + +
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSP--DDVAWTTVISGCVENGEEEQALFTYHQ 591
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD ++F+T++ A SL+ E +Q+H +++K P V+ +L+ Y C
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALE-QGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ A L M
Sbjct: 651 ------------------------------------------NIEDAYGLFRRMNTRSVA 668
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNAMI G +HG EEA + F +M S G+ D T+ ++SA ++GL + + +
Sbjct: 669 LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSM 728
Query: 310 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+T V+P EH+ + L+ ++ G + +A +V MP + L +NA
Sbjct: 729 QKTYGVEPEIEHY-----SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTL---LNAC 780
Query: 368 RLEEAKFIFREVPER 382
R++ K V E+
Sbjct: 781 RVQGDKETGERVAEK 795
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 38/217 (17%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
++ H +V G+ V N L++ Y C S + SARKLFD P S +D +
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGS---------LFSARKLFDITPQSDRDLVT 83
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+ ++A Y +L K TH EAF FR + +
Sbjct: 84 YNAILAAYAHTGELHDVEK-----TH--------------------EAFHIFRLLRQSVM 118
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+T + L G + L Y ++ +Q + + V AL+ Y K ++
Sbjct: 119 LTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQ----WDVFVAGALVNIYAKFQRIR 174
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+AR +FD+MPVRD+V WN ++ Y+ +E +F
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 57/348 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F T L+ YS G ++ AE LF+ D S+NAM+ ++ + + A++LF
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSL 490
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G D +F+ A + + +Q+H V+K V++ +L Y+ C
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQ-QGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ SARK+ + + P V
Sbjct: 550 ------------------------------------------EMKSARKVFNQIPSPDDV 567
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AW +ISG V +G E+A T+ +M G+Q DEYT+ +L+ A G+Q+HA +
Sbjct: 568 AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 310 LR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++ P F+++ +L+ Y KCG + A +F +M R + WNA++ G
Sbjct: 628 MKLNCAFDP---FVMT---SLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
EEA F E+ R + +T+ ++S + SG ++ K F+ M+
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ 729
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 152/369 (41%), Gaps = 83/369 (22%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPD 70
+A LNH L + IH ++ G+ + N I++Y K+ ++ YA +F
Sbjct: 307 VASLNHLE----LGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF------- 355
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
G +K D IS+N ++ + + +++LF+ +
Sbjct: 356 --------------GQMKEV------------DLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
R G PD F+ ++VL A S + E +Q+H +K G+ VL++ +S
Sbjct: 390 LRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGI-----VLDSFVS------- 437
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
T +I Y + + A L +
Sbjct: 438 ------------------------------TALIDVYSKGGKMEEAELLFHNQDGFDLAS 467
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNAM+ G+ Y EA F MH G + D+ T+ + A+ G+Q+HA V+
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ H+ L V + ++ Y KCG++ AR+VF+++P D V+W ++SG + E
Sbjct: 528 KMRF----HYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 371 EAKFIFREV 379
+A F + ++
Sbjct: 584 QALFTYHQM 592
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 65/344 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD------GH 121
NPD + L++ Y+ G++ A KLF+ TP + RD ++YNA++ AY+H + H
Sbjct: 45 NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTH 104
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A +F +++ + S + + L+ + L VK G+ V L
Sbjct: 105 EAFHIFRLLRQSVMLTTRHTLSPLF-KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR------------ 229
++ Y + AR LFD P+ +D W M+ YV
Sbjct: 164 VNIY---------AKFQRIREARVLFDRMPV--RDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 230 -------NDDLASARKLLDGMTHPI------------------------AVAWNAMISGY 258
D S R +L G+ WN +S Y
Sbjct: 213 AFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSY 272
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++ G EA D FR M + D TY ++S + G+Q+H V+R +
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF---GWD 329
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
F+ SV N+ I Y K G + AR +F +M DL+SWN ++SG
Sbjct: 330 QFV-SVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 147/350 (42%), Gaps = 46/350 (13%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L++ Y+ ++ A LF+ PV RD + +N M+KAY G + LF
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPV--RDVVLWNVMMKAYVEMGAGDEVLGLFSA 213
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS---VLNTLLSCYI 186
R G PD S T+L + E +Q+ K V S V N LS Y+
Sbjct: 214 FHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYL 273
Query: 187 ----------C----------CASSTLVESPVLMASARKLFDEAPLSQKDEPS-----W- 220
C C S T + ++AS L L ++ + W
Sbjct: 274 QAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHL----ELGKQIHGAVVRFGWD 329
Query: 221 ------TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
+ I YV+ + AR++ M ++WN +ISG R GL E + F +
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNC-GRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
G+ D++T TS++ A + C GRQ+H L+ + V+ ALI Y+
Sbjct: 390 LRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSF----VSTALIDVYS 445
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
K GK+ +A +F DL SWNA++ G+ + EA +F + ER
Sbjct: 446 KGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERG 495
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 55/315 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + +L Y G +K A K+FN P D +++ ++ N + A+ + +
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSP--DDVAWTTVISGCVENGEEEQALFTYHQ 591
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD ++F+T++ A SL+ E +Q+H +++K P V+ +L+ Y C
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALE-QGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ A L M
Sbjct: 651 ------------------------------------------NIEDAYGLFRRMNTRSVA 668
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNAMI G +HG EEA + F +M S G+ D T+ ++SA ++GL + + +
Sbjct: 669 LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSM 728
Query: 310 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+T V+P EH+ + L+ ++ G + +A +V MP + L +NA
Sbjct: 729 QKTYGVEPEIEHY-----SCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTL---LNAC 780
Query: 368 RLEEAKFIFREVPER 382
R++ K V E+
Sbjct: 781 RVQGDKETGERVAEK 795
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 38/217 (17%)
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
++ H +V G+ V N L++ Y C S + SARKLFD P S +D +
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGS---------LFSARKLFDITPQSDRDLVT 83
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+ ++A Y +L K TH EAF FR + +
Sbjct: 84 YNAILAAYAHTGELHDVEK-----TH--------------------EAFHIFRLLRQSVM 118
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+T + L G + L Y ++ +Q + + V AL+ Y K ++
Sbjct: 119 LTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQ----WDVFVAGALVNIYAKFQRIR 174
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+AR +FD+MPVRD+V WN ++ Y+ +E +F
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 180/416 (43%), Gaps = 73/416 (17%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKS--SNIPYAHHLFDKTP 67
L Q + + QT + IHAH + I +R++ + S + YA LF P
Sbjct: 12 LLQQWQNLTMKQT--KQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMP 69
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
NP+IF YN+++ +Y+ N ++ +F
Sbjct: 70 NPNIFD---------------------------------YNSIITSYTTNSQFDKSLSVF 96
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWG----VMCVPSVLNTLLS 183
+M P+ +F+T++ + ++ E Q+ +K G V V SV+N
Sbjct: 97 TKMLNMNIRPNSHTFTTLVKSCVTLSSLE----QVFTLTMKSGNSSDVYFVSSVINVF-- 150
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
+ AR++FDE+ S ++ WT++++GY + R + D M
Sbjct: 151 -----------SKHGAIHLARQVFDES--SNRNVVCWTSLVSGYCSCGLVNEVRDVFDKM 197
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-----IQMDEYTYTSLISASFNTGL 298
+ +AM+SGYVR+ + E FR++ ++ + S+++A G
Sbjct: 198 PQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGA 257
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
F G+ +H+YV ++ + L + ALI FY KCG + A +VFDKM V+D+ +W+A
Sbjct: 258 FEEGKWIHSYVEENGLE----YDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSA 313
Query: 359 ILSGYI----NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
++ G N LE + + + P+ N +T+ +++ ES +LF M
Sbjct: 314 MILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIM 369
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
D A L M +P +N++I+ Y + ++++ F KM +M I+ + +T+T+L+
Sbjct: 57 DFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVK 116
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ Q+ +++ +F+ SV I ++K G + AR+VFD+ R
Sbjct: 117 SCVTLSSL---EQVFTLTMKSGNSSDVYFVSSV----INVFSKHGAIHLARQVFDESSNR 169
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++V W +++SGY + + E + +F ++P+RN + + M+SG + F E ++LF ++K
Sbjct: 170 NVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELK 229
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 132/328 (40%), Gaps = 64/328 (19%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
+I+++ K I A +FD++ N ++ T+L+S Y + G V +F+ P R+
Sbjct: 146 VINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMP--QRNEA 203
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS-----TVLGA---MSLIAEEEW 157
S +AMV Y N V+LF +K+ F+ +VL A M E +W
Sbjct: 204 SNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKW 263
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+H V + G+ + L+ Y C + A K+FD+ + KD
Sbjct: 264 ----IHSYVEENGLEYDLELGTALIDFYAKCG---------WVKDAEKVFDKMLV--KDV 308
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
+W+ MI G N + N M A + F KM +
Sbjct: 309 ATWSAMILGLAINGN-------------------NKM------------ALELFEKMEKV 337
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKC 335
G + +E T+ +++A + LF +L + + PS EH+ ++ +
Sbjct: 338 GPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHY-----GCIVDILARS 392
Query: 336 GKLVQAREVFDKMPVR-DLVSWNAILSG 362
G++ +A + M + D W ++L+G
Sbjct: 393 GQVKKALIFINSMHIEPDGAIWGSLLNG 420
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 168/405 (41%), Gaps = 70/405 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+FS ++ Y G + A K+F ++ +D +S+ +++ Y+ N A+ LF R
Sbjct: 152 DLFSMIGVMGFYVKCGEIDDAFKVFER--LSEKDLVSWTSLIAGYAQNGYPKRALDLFYR 209
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G D + ++L A++ I + + +H ++ G SV+N LL Y C
Sbjct: 210 MQEAGLKADSVTLVSILPAVADIKDLRIG-KSIHGYALRLGFESKVSVINALLYMYFECG 268
Query: 190 SSTLV--------------------------ESPVLMASARKLFDEAP------------ 211
+ +S A+ K+ DE
Sbjct: 269 CERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALT 328
Query: 212 ------------------LSQK---DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
L +K + P ++++ Y + + A + + + V
Sbjct: 329 ACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVT 388
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNAMI GY ++G EA F M S ++ D +T ++I+A + + + +H +
Sbjct: 389 WNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAI 448
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
RT + + V ALI Y KCG AR++FD M R +++WNA++ GY +
Sbjct: 449 RTFMDND----VYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGK 504
Query: 371 EAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
EA IF +E N T+ +IS + SGF EE L F MK
Sbjct: 505 EAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMK 549
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 59/315 (18%)
Query: 58 YAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
Y HLF +T L++ + G++ A +F+ V + + Y+AM+K Y+ N
Sbjct: 49 YNDHLF----------QTKLINMFFKHGSINEASLVFDT--VEHKQDVLYHAMLKGYAKN 96
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
A+ + RM+ DG P + F+ +L E E +++H V+ G
Sbjct: 97 SSLCDALCFYHRMQNDGVRPVVYDFAYLLQLCGKKFELE-KGREIHGQVIVNGFEYDLFS 155
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
+ ++ Y+ C + A K+F+ LS+KD SWT++IAGY +N
Sbjct: 156 MIGVMGFYVKCGE---------IDDAFKVFER--LSEKDLVSWTSLIAGYAQN------- 197
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
G + A D F +M G++ D T S++ A +
Sbjct: 198 ------------------------GYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIK 233
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
G+ +H Y LR + +SV NAL+ Y +CG AR VF+ M + VSWN
Sbjct: 234 DLRIGKSIHGYALRLGFESK----VSVINALLYMYFECGCERIARLVFEGMINKCAVSWN 289
Query: 358 AILSGYINARRLEEA 372
++ GY + EEA
Sbjct: 290 TMIDGYAQIGKSEEA 304
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 154/392 (39%), Gaps = 86/392 (21%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
+L QL R IH ++ GF ++ Y K I A +F++
Sbjct: 123 YLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEK 182
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ S T+L++ Y+ G K A+ LF R
Sbjct: 183 DLVSWTSLIAGYAQNGYPK---------------------------------RALDLFYR 209
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G D + ++L A++ I + + +H ++ G SV+N LL Y C
Sbjct: 210 MQEAGLKADSVTLVSILPAVADIKDLRIG-KSIHGYALRLGFESKVSVINALLYMYFECG 268
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ AR +F+ + K SW TMI GY +
Sbjct: 269 CERI---------ARLVFE--GMINKCAVSWNTMIDGYAQI------------------- 298
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
G EEAF TF KM G++ + ++A + G GR +H
Sbjct: 299 ------------GKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVH--- 343
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ V+Q F + V N+L++ Y+KC ++ A +F+ + + V+WNA++ GY +
Sbjct: 344 -KLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCV 402
Query: 370 EEAKFIF-----REVPERNLLTWTVMISGLAE 396
EA ++F +EV + + T +I+ LA+
Sbjct: 403 NEALYLFCVMQSQEV-KPDCFTLVAVITALAD 433
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 52/278 (18%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+LLS YS V LA +F + + +++NAM+ Y+ N + A+ LF M+
Sbjct: 360 SLLSMYSKCKRVDLAASIFE--NLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEV 417
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PD F+ V+ A++ ++ + KW ++ L A T ++
Sbjct: 418 KPDCFTLVAVITALADLSVNR---------MAKW--------IHGL-------AIRTFMD 453
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ V +A+A +I Y + +ARKL D M + WNAMI
Sbjct: 454 NDVYVATA-------------------LIDMYAKCGATQTARKLFDMMHERHVITWNAMI 494
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-V 314
GY HGL +EA D F M + ++ T+ S+ISA ++G G + +
Sbjct: 495 DGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGL 554
Query: 315 QPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+PS +H+ +A++ + GKL A + ++MP++
Sbjct: 555 EPSMDHY-----SAVVDLLGRAGKLHGAWNLIEEMPIK 587
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T +I + ++ + A + D + H V ++AM+ GY ++ +A + +M + G++
Sbjct: 56 TKLINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVR 115
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
Y + L+ GR++H V +V E+ + S+ ++ FY KCG++
Sbjct: 116 PVVYDFAYLLQLCGKKFELEKGREIHGQV---IVNGFEYDLFSMI-GVMGFYVKCGEIDD 171
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
A +VF+++ +DLVSW ++++GY + A +F + E L
Sbjct: 172 AFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGL 215
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 186/444 (41%), Gaps = 58/444 (13%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
+L QL + +H ++ GF ++++Y K I A+ +F + P
Sbjct: 140 YLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPER 199
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLF--------NATPVTLRDTISYNAMVKAYSHNLDGH 121
D+ T+++ Y+ G + A KL A +TL + A VK H
Sbjct: 200 DLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVH 259
Query: 122 A-AVKL----------------------------FVRMKRDGFAPDPFSFSTVLGAMSLI 152
AV+L F RM + + S++TV+ ++
Sbjct: 260 GYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMS----SKNVVSWNTVIDGLAQN 315
Query: 153 AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPL 212
E E + + + P+ ++ + + + C L + +L D+ L
Sbjct: 316 GESE---EAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFV----HRLLDQMKL 368
Query: 213 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 272
S + ++I+ Y + + A + D + V WNAMI GY ++G EA + F
Sbjct: 369 SS-NVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFC 427
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
M S GI+ D +T+ S+I+A + + + +H +RT + + + V AL+ Y
Sbjct: 428 TMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTN----VFVATALVDMY 483
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTW 387
KCG + ARE+FD M R +++WNA++ GY + A +F ++ N +T+
Sbjct: 484 AKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITF 543
Query: 388 TVMISGLAESGFGEESLKLFNQMK 411
+IS + SGF EE L F MK
Sbjct: 544 LSVISACSHSGFVEEGLYYFKIMK 567
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 33/241 (13%)
Query: 58 YAHHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSH 116
+ H L D+ + ++ +L+S YS V +A +F+ + + +++NAM+ Y+
Sbjct: 358 FVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFD--NLEGKTNVTWNAMILGYAQ 415
Query: 117 NLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMC 173
N + A+ LF M+ G PD F+F +V+ A +S+ + +W +H ++ +
Sbjct: 416 NGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKW----IHGLAIRTNMDT 471
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
V L+ Y C + + +AR+LFD + ++ +W MI GY +
Sbjct: 472 NVFVATALVDMYAKCGA---------IETARELFD--MMQERHVITWNAMIDGYGTHGLG 520
Query: 234 ASARKLLDGMTHPIAVAWNAMI----------SGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
+A L D M + ++ N + SG+V GLY F ++ + + MD
Sbjct: 521 KAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLY--YFKIMKEGYGLEPSMDH 578
Query: 284 Y 284
Y
Sbjct: 579 Y 579
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 13/235 (5%)
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDE-APLSQKDEPS 219
Q+H VVK G V N L+ Y E + A+++F+E D +
Sbjct: 131 QVHDHVVKLGYTGNVFVRNALIHFYF--------EGFDVSEYAKRVFEEEVDEVCSDVVT 182
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
W +M+AG VR ++ A K+ D M V+W++MI GYV++G E+ + FR M GI
Sbjct: 183 WNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGI 242
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ +E +++SAS GL GR +H+ + + S +++ L+ Y KCG +
Sbjct: 243 RPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRIS----VAIGTGLVDMYAKCGCIE 298
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
++R++FD M RD+ +W ++ G + R +EA +FRE V+ G+
Sbjct: 299 ESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGV 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 23/283 (8%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNI-PYAHHLFDKTPNP---DIFSRTTLLSAYS 82
+H H++ G+ +RN LI Y + ++ YA +F++ + D+ + ++L+
Sbjct: 132 VHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLV 191
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V+ AEK+F+ P RD +S+++M+ Y N ++ F M+ G P+
Sbjct: 192 RKGEVRDAEKMFDEMP--KRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESIL 249
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
T+L A + + W + +H + ++ L+ Y C +
Sbjct: 250 VTMLSASAQLGLLGWG-RFVHSTIESLRFRISVAIGTGLVDMYAKCGC---------IEE 299
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGY 258
+R LFD + ++D +WT MI G +D A R+ + P+ V + +++
Sbjct: 300 SRDLFD--GMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNAC 357
Query: 259 VRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFN 300
R GL E F+ M GI + Y ++ GL +
Sbjct: 358 SRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLID 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query: 282 DEYTYTSLISA-SFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
+++T+T L+ A + FN G Q+H +V++ + + V NALI FY + +
Sbjct: 106 NQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGN----VFVRNALIHFYFEGFDV 161
Query: 339 VQ-AREVFDKMP---VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
+ A+ VF++ D+V+WN++L+G + + +A+ +F E+P+R++++W+ MI G
Sbjct: 162 SEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGY 221
Query: 395 AESGFGEESLKLFNQMK 411
++G E+ L+ F M+
Sbjct: 222 VQNGKLEDGLECFRLMR 238
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 45/404 (11%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN-PDIFSRTTLLSAYSAAGN 86
HA ++ GF L ++ + +++ Y K I +F D + ++S+Y G
Sbjct: 336 HALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGM 395
Query: 87 VKLAEKL--FNATPVTLR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+ A ++ + LR D ++ ++++ + D KL R+ F D S
Sbjct: 396 FEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLS 455
Query: 144 TVL------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
VL G M A +H D+V W NT+L+ CA L
Sbjct: 456 GVLDMYAKCGIMD-CARGVFHFAGKKKDIVLW---------NTMLAA---CAEKGL---- 498
Query: 198 VLMASARKLFDEAPLSQ--KDEPSWTTMIAGYVRNDDLASARKL-----LDGMTHPIAVA 250
A KLF + + + SW ++I G+ RN + A+ + L G+T P +
Sbjct: 499 --SGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVT-PNLIT 555
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W MISG ++GL EA F++M G++ + + TS +SA N L N GR +H YV+
Sbjct: 556 WTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVM 615
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
R + F L + ++I Y KCG L A+ VF ++L +NA++S Y + +
Sbjct: 616 RNFMS----FSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSA 671
Query: 371 EAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
EA +F+E+ ++ ++ T+T ++S + +E L+LF M
Sbjct: 672 EALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYM 715
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 167/385 (43%), Gaps = 92/385 (23%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
++ T+L+ Y G ++ AEK+F+ P R+ + +N+M+ Y N AV LF +M
Sbjct: 244 VYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKM 303
Query: 131 K-RDGFAPDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
+ G P S S A + L A EE +Q H V+ G LN
Sbjct: 304 RFEGGVEPSEVSLSGFFSACANLEAVEEG--KQGHALVILMGFE-----LNY-------- 348
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
VL +S + + L ++ E + +M V D+
Sbjct: 349 ---------VLGSSIMNFYSKVGLIEEVELVFRSMA---VLKDE---------------- 380
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V WN MIS YV+ G++E+A + M ++ D T +SL++ + +T G++LH
Sbjct: 381 VTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHG 440
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF---------------------- 345
+ +R ++V + ++ Y KCG + AR VF
Sbjct: 441 FCIRNEFYSD----MAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEK 496
Query: 346 ---------------DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLT 386
+ +P ++VSWN+++ G+ ++ EA+ +F E+ NL+T
Sbjct: 497 GLSGEALKLFFQMQMESVP-PNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLIT 555
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
WT MISGLA++G G E+ ++F QM+
Sbjct: 556 WTTMISGLAQNGLGYEASRVFQQMQ 580
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 141/338 (41%), Gaps = 30/338 (8%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD-KTPNPDIFSRTTLLSAY 81
L + +H + F + + ++D+Y K + A +F DI T+L+A
Sbjct: 434 LGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAAC 493
Query: 82 SAAGNVKLAEKLF-----NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
+ G A KLF + P + +S+N+++ + N A +F M+ G
Sbjct: 494 AEKGLSGEALKLFFQMQMESVP---PNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVT 550
Query: 137 PDPFSFSTVLGAMS---LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
P+ +++T++ ++ L E QQ+ ++ + + S L+ C + L
Sbjct: 551 PNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSA------CTNMALL 604
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ + F L T++I Y + +L A+ + + +NA
Sbjct: 605 NYGRSIHGYVMRNFMSFSLQIT-----TSIIDMYAKCGNLDDAKFVFIICSTKELPVYNA 659
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRT 312
MIS Y HG EA F+++ GI D T+TS++SA + L G +L Y V
Sbjct: 660 MISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCEL 719
Query: 313 VVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMP 349
++PSE H+ L+ T G+L +A + MP
Sbjct: 720 QMKPSEKHY-----GCLVKLLTNDGQLDEALRIILTMP 752
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
++ A++ R+GLY+EA ++ +M G D + + + A GR +H +
Sbjct: 174 SYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGF- 232
Query: 310 LRTVVQPSEHF--ILSVNNALITFYTKCGKLVQAREVFDKMP--VRDLVSWNAILSGYIN 365
VV+ F + V +L+ Y KCG L A +VFD+MP R+ V WN+++ GY+
Sbjct: 233 ---VVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQ 289
Query: 366 ARRLEEAKFIFREV 379
EA +F ++
Sbjct: 290 NGMNVEAVGLFEKM 303
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 195/435 (44%), Gaps = 77/435 (17%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
+AQ + + TL +++H HIL +G L ++LID Y K S I A LFD+ PN
Sbjct: 7 LIAQFTNKKSLTTL-KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNR 64
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNAT--PVTLRDTISYNAMVKAYS-----------H 116
I + +++S++ + G K A +L++ L D +++A+ KA+S H
Sbjct: 65 HIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAH 124
Query: 117 NL---------DGHAAVKL------FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
L DG A + F +MK F D V+ +LI ++ +
Sbjct: 125 GLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG--YNQRG 182
Query: 162 LHCDVVKWGVMCVPSVLN----TLLSCYICCAS-STLVESPVLMASARKLFDEAPLSQKD 216
L + ++ V S + TL S + C + LV ++ K E+ ++
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVA--- 239
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
S T+++ Y + + + + K+ + + + V W + I G V++G E A FR+M
Sbjct: 240 --SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIR 297
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
I + +T++S++ A + + G Q+HA ++ V +++ V+ ALI Y KCG
Sbjct: 298 CSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKY----VDAALIHLYGKCG 353
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 396
+ +AR VF+ + D+VS N ++ Y A+
Sbjct: 354 NVEKARSVFESLTELDVVSINTMIYAY-------------------------------AQ 382
Query: 397 SGFGEESLKLFNQMK 411
+GFG E+L+LF +MK
Sbjct: 383 NGFGHEALELFERMK 397
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
YTSLI+ N + LH ++L+ S + LI Y KC + +AR++F
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILK-----SGSLFSFFGHKLIDGYIKCSVITEARKLF 58
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGE 401
D+MP R +V+WN+++S +++ + +EA ++ + +L T++ + +E G
Sbjct: 59 DEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSR 118
Query: 402 ESLK 405
E K
Sbjct: 119 EGQK 122
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ Y GNV+ A +F + +T D +S N M+ AY+ N GH A++LF RMK+ G
Sbjct: 345 LIHLYGKCGNVEKARSVFES--LTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHK 402
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQ 160
P+ +F ++L A + E CQ
Sbjct: 403 PNVVTFISILLACNNAGLVEEGCQ 426
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 57/353 (16%)
Query: 54 SNIPYAHHLFDKTPNPDIFSRTTLLSA----YSAAGNVKLAEKLFNATPVTLRDTISYNA 109
S +PY L S LL++ Y G+++ KLF + RD +S+N+
Sbjct: 181 SEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEF--MDRRDVVSWNS 238
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW 169
++ AY+ D + L RMK G P +F +VL ++++ + + +H +++
Sbjct: 239 LLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVL-SVAVSTGDMRLGRLVHGQILRG 297
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
G + D T+ I Y++
Sbjct: 298 GFVL------------------------------------------DAHIETSFIVMYLK 315
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
++ A K+ + V W AMISG V++ ++A F +M G++ T S+
Sbjct: 316 GGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASV 375
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
I+A G FN G+ +H Y+LR + + +N+L+T Y KCG L Q+ VFD+M
Sbjct: 376 ITACAQLGAFNLGKSIHGYILRQKLSLDT----AAHNSLVTMYAKCGHLDQSYIVFDRMS 431
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESG 398
RDLVSWNAI++GY + +A +F E+ + +T ++ G A +G
Sbjct: 432 KRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTG 484
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 186/418 (44%), Gaps = 39/418 (9%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +H + GF + N ++++Y K +I LF+ D+ S +LLSAY+
Sbjct: 187 QCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQI 246
Query: 85 GNVKLAEKLFNATPVTLRDT----ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP- 139
G+ L E L + L+ ++ +++ D + ++ R GF D
Sbjct: 247 GD--LCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAH 304
Query: 140 ----FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN----TLLSCY-----I 186
F + G +A + + + L DVV W M V N L+ +
Sbjct: 305 IETSFIVMYLKGGNINVAFKMFE-RSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKF 363
Query: 187 CCASSTLVESPVLMASAR-------KLFDEAPLSQK---DEPSWTTMIAGYVRNDDLASA 236
ST + V+ A A+ K L QK D + +++ Y + L +
Sbjct: 364 GMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQS 423
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
+ D M+ V+WNA+++GY ++G +AF F +M S D T SL+ +T
Sbjct: 424 YIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCAST 483
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G + G+ +H +V+R ++P + V+ +L+ Y KCG L A+ F+ MP +DLVSW
Sbjct: 484 GQLHPGKWIHGFVIRNGLRPC----ILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSW 539
Query: 357 NAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+AI++GY + E A ++ + E N + + ++S + +G ++ L ++ M
Sbjct: 540 SAIIAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESM 597
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+++I YV+ ARK+ D M V W +I Y + G EAF FR+M GIQ
Sbjct: 108 SSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQ 167
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
T SL+ C LH + L++ N+++ Y KCG +
Sbjct: 168 PSSVTLLSLLFGVSEVPYVQC---LHGCAIFYGFMSD----LNLLNSMVNLYGKCGSIED 220
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
R++F+ M RD+VSWN++LS Y L E + + + + L
Sbjct: 221 CRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGL 264
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 233 LASARKLLDGMTHPIAVA-----WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
L + ++ + + HP + + +NA+I+ + G + + T+ M + I D YT+
Sbjct: 14 LTAQKRFVALLPHPPSSSATTHSYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFP 73
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
SL+ A LF+ G LH V+ + + + ++LI FY K G AR+VFD
Sbjct: 74 SLLKACSFLNLFHLGNSLHQRVIVNGLSTDSY----IASSLINFYVKFGYNDVARKVFDF 129
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
MP R++V W ++ Y + EA +FR++
Sbjct: 130 MPERNVVPWTTVIGCYSKMGDVREAFSLFRQM 161
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 152/366 (41%), Gaps = 41/366 (11%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +H IL GF L I I +Y K NI A +F+++ + D+ T ++S
Sbjct: 286 LGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLV 345
Query: 83 AAGNVKLAEKLFNA--------TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
N A +F+ + T+ I+ A + A++ H + L ++ D
Sbjct: 346 QNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYI-LRQKLSLDT 404
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHC-DVVKWGVM--------CVP---SVLNTLL 182
A + S T+ + + ++ D+V W + CV S+ N +
Sbjct: 405 AAHN--SLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMR 462
Query: 183 SCYICCASSTLVESPVLMASARKL-----FDEAPLSQKDEPSW---TTMIAGYVRNDDLA 234
SC+ S T+V AS +L + P T+++ Y + DL
Sbjct: 463 SCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLD 522
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
SA++ + M V+W+A+I+GY HG E A + K I+ + + S++S+
Sbjct: 523 SAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSCS 582
Query: 295 NTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM---P 349
+ GL + G ++ + R V EH + ++ + GK+ +A ++ +M P
Sbjct: 583 HNGLIDQGLNIYESMTRDFGFVPNLEH-----HACMVDLLCRAGKVEEAYNLYKRMFSDP 637
Query: 350 VRDLVS 355
V D++
Sbjct: 638 VLDVLG 643
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 152/348 (43%), Gaps = 59/348 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI + L++ YS V A +F+ PV + +S+N M+ A + A+ LF++
Sbjct: 90 DILTSNMLINMYSKCSLVHDARIVFDEMPV--KSVVSWNTMIGALTRIAKEQEALMLFIQ 147
Query: 130 MKRDGFAPDPFSFSTVLGAMSL---IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
M R+G + F+ S+VL + I E C QLH +K V V LL Y
Sbjct: 148 MLREGTLFNEFTISSVLCECAFKCAILE----CMQLHAFSIKVSVDSNCFVGTALLHVYA 203
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
C+S + A K+ + M
Sbjct: 204 KCSS------------------------------------------IKDASKMFESMPET 221
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
AV W+++++GYV++GL+E A FR MG + D + +S + A G+Q+H
Sbjct: 222 NAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVH 281
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
A ++ + + V ++LI Y KCG + +A VF +R +V WNA++SG+
Sbjct: 282 AISCKSGFGSN----IYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRH 337
Query: 367 RRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
EA +F ++ +R L +T+ +++ + G E+ K F+ M
Sbjct: 338 ACALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLM 385
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 55/298 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ + F T LL Y+ ++K A K+F + P T + +++++++ Y N AA+ LF
Sbjct: 189 DSNCFVGTALLHVYAKCSSIKDASKMFESMPET--NAVTWSSILAGYVQNGLHEAALLLF 246
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+ GF D F S+ + A C
Sbjct: 247 RDYQLMGFEQDAFLISSAVCA--------------------------------------C 268
Query: 188 CASSTLVESPVLMA-SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
+TL+E + A S + F +++I Y + + A + G
Sbjct: 269 AGLATLIEGKQVHAISCKSGFGSNIYVT------SSLIDMYAKCGCIREAYIVFQGEELR 322
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V WNAMISG+ RH EA F KM G+ D+ TY S+++A + GL G +
Sbjct: 323 SIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYF 382
Query: 307 AYVLRT-VVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILS 361
++R ++PS H+ + ++ + G + +A ++ ++MP S W ++L+
Sbjct: 383 DLMVREHNLRPSVLHY-----SCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLA 435
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 170/413 (41%), Gaps = 85/413 (20%)
Query: 5 TMANLFLAQLNHPSATQTL--ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
++ N F L+ + + L ++H I+ GF L+ LI Y K + A L
Sbjct: 70 SLINSFSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTL 129
Query: 63 FD---KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATP----------VTL-------- 101
F+ + N D + T L+ Y G A +LF+ VT+
Sbjct: 130 FNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNACVNLG 189
Query: 102 ---------------RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+ +++N M+ + AV+ + +M+ +G + ++VL
Sbjct: 190 KLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVL 249
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A++ + + +H + VK G ES V +AS
Sbjct: 250 SAVAGLGDLGCG-LLVHGEAVKLGF-----------------------ESSVYVAS---- 281
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
++I Y + + L A+K+ D + V WN ++ Y ++G +
Sbjct: 282 ---------------SLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSD 326
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
+ F +M G DE+TY+S++S+ + GRQLH+ +++ + L VNN
Sbjct: 327 VMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDN----LCVNN 382
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
AL+ Y K G L +AR+ F++M RD +SWNAIL GY+ EA +FR +
Sbjct: 383 ALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRM 435
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 163/349 (46%), Gaps = 55/349 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ ++F+ ++L+ YS G ++ A K+++ P +S NA++ Y+ D A+ L
Sbjct: 476 DTNLFAGSSLIDMYSKCGGIEDARKIYSCMPE--WSVVSMNALIAGYAIK-DTKEAINLL 532
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYI 186
M+ G P +F++++ + + Q+HC ++K G++C L T LL Y+
Sbjct: 533 HEMQILGLKPSEITFASLIDCCKE-SPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYM 591
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
S L E +L + +L++ + +
Sbjct: 592 --DSQKLAEGNILFS------------------------------ELSNLKSI------- 612
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V W A+ISG+ ++ ++A + +R+M I D+ T+ +++ A G+++H
Sbjct: 613 --VLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIH 670
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYIN 365
+ + T E ++AL+ Y KCG + A +VF+++P+ +D++SWN+++ G+
Sbjct: 671 SLIFHTGFDLDE----LTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAK 726
Query: 366 ARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
E A +F E+ ++ +T+ +++ + +G E ++F+ M
Sbjct: 727 NGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNM 775
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
++ ++L++ Y + A+K+F+ V R+ + +N ++ Y+ N ++LF M
Sbjct: 277 VYVASSLINMYGKCEMLCDAKKVFDV--VCDRNVVMWNTILGVYAQNGCLSDVMELFSEM 334
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
G PD F++S++L + + + +QLH ++K + L C +
Sbjct: 335 MGCGNDPDEFTYSSILSSCACFDFLDIG-RQLHSTIIK------KRFTDNL------CVN 381
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ LV+ Y + L ARK + M + ++
Sbjct: 382 NALVDM------------------------------YAKAGALKEARKQFERMKYRDNIS 411
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNA++ GYV+ EAF+ FR+M+ G+ DE S++SA N + G Q H +
Sbjct: 412 WNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSV 471
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+ + + L ++LI Y+KCG + AR+++ MP +VS NA+++GY
Sbjct: 472 KLGLDTN----LFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGY 520
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 50/310 (16%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ Y+ AG +K A K F + RD IS+NA++ Y + A +F RM R G
Sbjct: 384 LVDMYAKAGALKEARKQFE--RMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVV 441
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD +++L A I E Q H VK G L+T
Sbjct: 442 PDEVCMASILSACGNIKVLEAGLQ-FHGLSVKLG-------LDT---------------- 477
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
LF + +++I Y + + ARK+ M V+ NA+I+
Sbjct: 478 --------NLF-----------AGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIA 518
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
GY +EA + +M +G++ E T+ SLI + G Q+H +L+ +
Sbjct: 519 GYAIKDT-KEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKNGLLC 577
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFI 375
F+ +L+ Y KL + +F ++ ++ +V W A++SG+ ++A +
Sbjct: 578 GSEFL---GTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNL 634
Query: 376 FREVPERNLL 385
+RE+ + N+L
Sbjct: 635 YREMRDNNIL 644
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 50/343 (14%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
F T+LL Y + + LF+ L+ + + A++ ++ N A+ L+ M+
Sbjct: 581 FLGTSLLGMYMDSQKLAEGNILFSELS-NLKSIVLWTALISGHTQNDCSDQALNLYREMR 639
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
+ PD +F TVL A +L++ + Q++H + G + L+ Y C
Sbjct: 640 DNNILPDQATFVTVLRACALLSSLQ-DGQEIHSLIFHTGFDLDELTSSALVDMYAKCGD- 697
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ SA K+F+E P+ +KD SW +MI G+ +N
Sbjct: 698 --------VKSAAKVFEELPI-KKDVISWNSMIVGFAKN--------------------- 727
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
G E A F +M + D+ T+ +++A + GL + GRQ+ ++
Sbjct: 728 ----------GYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVN 777
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YINAR 367
S H + + ++ +CG L +A E DK+ V + + W +L + + +
Sbjct: 778 YY---SIHPRVDHHACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWANLLGACSIHGDEK 834
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
R A E+ +N + ++ + A SG +E+ L M
Sbjct: 835 RGLRAAEKLIELEPQNSSPYVLLYNMHAGSGHWDEAKSLRRTM 877
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 118/306 (38%), Gaps = 81/306 (26%)
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
SFST L + + + E+ +H ++K G + L+ Y C +
Sbjct: 74 SFSTTLSSCTKLENLEFG-TSVHTSIIKNGFESDTLLTRHLIHFYAKCKC---------L 123
Query: 201 ASARKLFDEAP-LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA----------- 248
SAR LF+ L D ++T +I GYVR A +L D M
Sbjct: 124 NSARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLN 183
Query: 249 ------------------------VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
VAWN MISG+ + G ++EA + +RKM G+
Sbjct: 184 ACVNLGKLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRS 243
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T S++SA G CG +H ++ + S + V ++LI Y KC L A++V
Sbjct: 244 TLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVY----VASSLINMYGKCEMLCDAKKV 299
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
FD V +RN++ W ++ A++G + +
Sbjct: 300 FDV-------------------------------VCDRNVVMWNTILGVYAQNGCLSDVM 328
Query: 405 KLFNQM 410
+LF++M
Sbjct: 329 ELFSEM 334
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 40/337 (11%)
Query: 86 NVKLAEKLFNATPVTLRDTIS-YNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPFSFS 143
N K EK R TI+ +NAM+ Y N + A++LFV M + G +P+ + S
Sbjct: 335 NCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLS 394
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+VL A + E + +H VVKWG V N L+ Y S + + A
Sbjct: 395 SVLPA-CVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMY-----SRMGRIEI----A 444
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
R +F +++KD SW TMI GYV A LL M G H +
Sbjct: 445 RSIF--GSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQR-----------GQAEHRI 491
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
FD + + ++ + T +++ G+++HAY ++ ++ ++
Sbjct: 492 --NTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKD----VA 545
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER- 382
V +AL+ Y KCG L +R VF++M VR++++WN ++ Y + EEA +FR + E
Sbjct: 546 VGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEG 605
Query: 383 --------NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N +T+ + + L+ SG +E L LF MK
Sbjct: 606 DNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMK 642
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 111/254 (43%), Gaps = 51/254 (20%)
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
H A+ + M G PD F+F VL A + I + +QLH V K+G +V N+
Sbjct: 67 HQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLG-KQLHAHVFKFGQALPTAVPNS 125
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
++ Y C D+ +AR++
Sbjct: 126 FVNMYGKCG------------------------------------------DIDAARRVF 143
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN--TGL 298
D +T+ V+WN+MI+ R +E A FR M + +T S+ A N GL
Sbjct: 144 DEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGL 203
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
G+Q+HA+VLR + + NNAL+T Y K G++ +A+ +FD +DLVSWN
Sbjct: 204 L-LGKQVHAFVLR-----NGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNT 257
Query: 359 ILSGYINARRLEEA 372
I+S R EEA
Sbjct: 258 IISSLSQNDRFEEA 271
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 136/358 (37%), Gaps = 79/358 (22%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + +HAH+ G L + N +++Y K +I A +FD+
Sbjct: 102 NLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDE---------------- 145
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+T RD +S+N+M+ A + AV LF M + P F+
Sbjct: 146 -----------------ITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFT 188
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+V A S + +Q+H V++ G
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNG------------------------------- 217
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
R + A ++ Y + + A+ L D V+WN +IS ++
Sbjct: 218 DWRTFTNNA------------LVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQN 265
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+EEA M G++ + T S++ A + + CG+++HA+VL F
Sbjct: 266 DRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSF- 324
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
V AL+ Y C + + R VFD M R + WNA+++GY+ EA +F E+
Sbjct: 325 --VGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEM 380
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 63/309 (20%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
F+ L++ Y+ G V A+ LF+ +D +S+N ++ + S N A+ M
Sbjct: 222 FTNNALVTMYAKLGRVYEAKTLFDV--FDDKDLVSWNTIISSLSQNDRFEEALLYLHVML 279
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC--DVVKWGVMCVPSVLNTLLSC----- 184
+ G P+ + ++VL A S H + L C ++ + +M + N+ + C
Sbjct: 280 QSGVRPNGVTLASVLPACS-------HLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDM 332
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
Y C R +FD + ++ W MIAGYVRN+
Sbjct: 333 YCNCKQPE---------KGRLVFD--GMFRRTIAVWNAMIAGYVRNE------------- 368
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGR 303
EA + F +M +G+ + T +S++ A F
Sbjct: 369 ------------------FDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKE 410
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+H+ V++ + ++ V NAL+ Y++ G++ AR +F M +D+VSWN +++GY
Sbjct: 411 GIHSCVVKWGFEKDKY----VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGY 466
Query: 364 INARRLEEA 372
+ R ++A
Sbjct: 467 VVCGRHDDA 475
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+ +A T+ M + G+ D + + +++ A+ N G+QLHA+V + + +
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKF----GQALPTA 121
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
V N+ + Y KCG + AR VFD++ RD VSWN++++ E A +FR
Sbjct: 122 VPNSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFR 175
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I Y + ++ AR + D M V WN +I+GY G EEA + KM G ++D
Sbjct: 265 LIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKID 324
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+T + +I+ G+Q HA ++R L N+AL+ FY+K G++ AR
Sbjct: 325 HFTISIVITICARLASLEHGKQGHAALVRRGFGTD----LVANSALVNFYSKWGRMENAR 380
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESG 398
VFDKM ++++SWNA+++GY + R EEA +F ++ + N+ +T+ ++S + SG
Sbjct: 381 HVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSG 440
Query: 399 FGEESLKLFNQM 410
E ++F M
Sbjct: 441 LSERGWEIFQSM 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
+V+ + + AR D M + +W MI G V Y EAF+ F M T+
Sbjct: 168 HVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTF 227
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+++ AS GRQ+H +L+ V V+ ALI Y+KCG + AR VFD
Sbjct: 228 AAMVRASARLDCIEVGRQIHTCILKRAVNGDPF----VDCALIDMYSKCGNIEDARCVFD 283
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+MP + V WN I++GY EEA I+
Sbjct: 284 QMPQKTTVGWNTIIAGYAFRGFSEEALGIY 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+ + N D F L+ YS GN++ A +F+ P + T+ +N ++ Y+
Sbjct: 250 ILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQ--KTTVGWNTIIAGYAFRGFSE 307
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+ ++ +M+ G D F+ S V+ + +A E H +Q H +V+ G
Sbjct: 308 EALGIYYKMRDSGTKIDHFTISIVITICARLASLE-HGKQGHAALVRRGF---------- 356
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ LV + L + Y + + +AR + D
Sbjct: 357 --------GTDLVANSAL------------------------VNFYSKWGRMENARHVFD 384
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M ++WNA+I+GY HG EEA + F KM + + T+ +++SA +GL
Sbjct: 385 KMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSER 444
Query: 302 GRQL 305
G ++
Sbjct: 445 GWEI 448
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 149/334 (44%), Gaps = 54/334 (16%)
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
AAG++ +LF VT D+ +N+++KA S + + + RM P ++F
Sbjct: 62 AAGSIAYTRRLF--LSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTF 119
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++V A + H +K G T++ S V ++
Sbjct: 120 TSVFKACA------------HLSALKIG---------------------TILHSHVFVSG 146
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
F Q ++A Y ++ L ARK+ D M VAWN MISGY +G
Sbjct: 147 ----FGSNSFVQ------AAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNG 196
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
L EA FRKM+ MG+ D T+ S+ SA G G +V ++V +
Sbjct: 197 LANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELG----CWVYDSIVSNGIRVNV 252
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIFREVPE 381
+ +LI +++CG + +AR VFD + ++++W A++SGY ++ +E + + E
Sbjct: 253 ILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKE 312
Query: 382 R----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
R N +T+ ++S A +G E ++F M+
Sbjct: 313 RGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMR 346
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 147/365 (40%), Gaps = 88/365 (24%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
S T ++F A H SA + + +H+H+ +GF ++ ++ Y KSS + A
Sbjct: 115 SSYTFTSVFKA-CAHLSALK-IGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARK 172
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+FDK P R +++N M+ Y HN +
Sbjct: 173 VFDKMPQ---------------------------------RSVVAWNTMISGYEHNGLAN 199
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+ LF +M G PD +F +V A S I E C ++ +V G+ + +L
Sbjct: 200 EAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGC-WVYDSIVSNGIRVNVILGTSL 258
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
++ + C + AR +FD +S+ + +WT MI+GY
Sbjct: 259 INMFSRCGD---------VRRARAVFDS--ISEGNVIAWTAMISGY-------------- 293
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFN 300
GM HG EA + F +M G+ + T+ +++SA + GL +
Sbjct: 294 GM-----------------HGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIH 336
Query: 301 CGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM-PVRDLVS-W 356
GRQ+ A + +V EH + ++ K G L +A + ++ PV + + W
Sbjct: 337 EGRQVFASMREEYGLVPGLEHHV-----CMVDMLGKAGLLTEAYQFIKELCPVEHVPAVW 391
Query: 357 NAILS 361
A+L
Sbjct: 392 TAMLG 396
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 148/345 (42%), Gaps = 58/345 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L++ YS G + A LF++ +NAM+ YS A+++F RM ++
Sbjct: 309 TALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQND 368
Query: 135 FAPDPFSFSTVL----GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
PD ++F V G L + +E H L C + SVLN L Y+ C
Sbjct: 369 VKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEI----SVLNALADAYVKC-- 422
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ L + K+ M V+
Sbjct: 423 ----------------------------------------ESLEAGEKVFYKMEKKDIVS 442
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W M++ Y + + +A F +M + G + +T++S+I+A L G+Q+H +
Sbjct: 443 WTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLIC 502
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + + +ALI Y+KCG L +A+ +F+++ D V+W AI+S Y +E
Sbjct: 503 KASLDAES----CIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVE 558
Query: 371 EAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+A +FR++ + N +T ++ + G E+ L++FNQM+
Sbjct: 559 DALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQME 603
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 63/337 (18%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L AY +++ EK+F + +D +S+ MV AY + A+ +F +M +GFA
Sbjct: 415 LADAYVKCESLEAGEKVF--YKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFA 472
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
P+ F+FS+V+ A + E+ QQ+H G++C S+ + + +ES
Sbjct: 473 PNHFTFSSVITACGGLCLLEYG-QQIH------GLICKASL-----------DAESCIES 514
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+I Y + +L A+ + + +++P V W A+IS
Sbjct: 515 -------------------------ALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIIS 549
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VV 314
Y +HGL E+A FRKM ++ + T ++ A + G+ G ++ + T VV
Sbjct: 550 TYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVV 609
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YINARRLE 370
EH+ ++ + G+L +A DKMP+ D + W +L + NA E
Sbjct: 610 PEMEHYA-----CVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRIHGNAELGE 664
Query: 371 -EAKFIFREVPERN------LLTWTVMISGLAESGFG 400
A+ I PE LL+ T + SGL E G G
Sbjct: 665 TAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIG 701
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 142/369 (38%), Gaps = 92/369 (24%)
Query: 24 ARAIHAHILTTGF--RLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
A IH H+L +GF R + N ++ Y K + A +FD ++FS T ++ A
Sbjct: 85 ANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVAS 144
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G + A ++LF M G D F+
Sbjct: 145 NEHGYYRYA---------------------------------LELFCMMLEQGLLLDGFA 171
Query: 142 FSTVL----GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
FS VL G S++ E H Q VV G + V +LL+ Y A + E
Sbjct: 172 FSAVLQSCVGLDSVVFGEMVHAQ-----VVVRGFLMHAVVGTSLLNLY---AKLGMCECS 223
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
V + + MT V+WNAMISG
Sbjct: 224 V---------------------------------------NVFNNMTDVNDVSWNAMISG 244
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
+ +GLY +AFD M G+ ++ T+ + A G N ++H Y + +
Sbjct: 245 FTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSN 304
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS--WNAILSGYINARRLEEAKFI 375
SV ALI Y+KCG L AR +FD LV+ WNA+++GY A EA +
Sbjct: 305 T----SVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEM 360
Query: 376 FREVPERNL 384
F + + ++
Sbjct: 361 FTRMCQNDV 369
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 193/428 (45%), Gaps = 57/428 (13%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +HA +L T P ++I +Y +++I YAHH+FDKT +F +++ A++ A
Sbjct: 23 KQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKA 82
Query: 85 GNVKLAEKLFNATPVT-LR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
A LF V +R D +Y ++A + + D + G DP
Sbjct: 83 RRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICC 142
Query: 143 STVLGAMSLIA----EEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
S ++ A S + + D+V W N+L+S Y S + E +
Sbjct: 143 SALVSAYSKLGVVHEARRVFDGIVEPDLVLW---------NSLISAY---GGSGMWEIGI 190
Query: 199 LMASARKLFDEAP--------------------------LSQK-----DEPSWTTMIAGY 227
M S+ +L + P LSQK D + +++ Y
Sbjct: 191 QMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMY 250
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
R + SA ++ G+ +P V W+A+ISGY + G Y++A FRK++ ++D
Sbjct: 251 SRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIA 310
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
+++++ G ++H YVLR ++ + V++ALI Y+KCG L VF
Sbjct: 311 TVLASITQMANVLPGCEIHGYVLRHGLESD----VKVSSALIDMYSKCGFLHLGTCVFRI 366
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEES 403
M R+++S+N+++ Y +A +F E+ ++ L+ T++ ++S +G ++
Sbjct: 367 MLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDG 426
Query: 404 LKLFNQMK 411
+LF +MK
Sbjct: 427 RELFWRMK 434
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 8/195 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+ +I Y D LA A+ + + + WN +IS YV++ L+E+A +R+M S G+
Sbjct: 131 SKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVI 190
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D+YTY S++ A ++ G +H + + + S + L V+NAL+ Y + GKL
Sbjct: 191 PDDYTYPSVLKACGELLDYDSGVAVH----KAIQESSIKWSLFVHNALVFMYGRFGKLEV 246
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF---REVP-ERNLLTWTVMISGLAE 396
ARE+FD MP RD VSWN ++S Y + +EA +F RE ERN++ W + G
Sbjct: 247 ARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLH 306
Query: 397 SGFGEESLKLFNQMK 411
+G + +LKLF+QM+
Sbjct: 307 TGNFKGALKLFSQMR 321
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 167/383 (43%), Gaps = 62/383 (16%)
Query: 4 RTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF 63
+ + +L L N S +Q + IHAHI++ G P++ ++LI+ Y
Sbjct: 93 QPIKHLLLGCTNLKSLSQ--GKQIHAHIISLGIHQNPILVSKLINFY------------- 137
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAA 123
+ D+ + +++ S + D + +N ++ Y N A
Sbjct: 138 ---ASVDLLADAQIVAECSNS-----------------FDPLHWNMVISLYVKNCLFEDA 177
Query: 124 VKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC---QQLHCDVVKWGVMCVPSVLNT 180
+ ++ RM G PD +++ +VL A + + + + + +KW + V N
Sbjct: 178 ISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLF----VHNA 233
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y + AR+LFD P +D+ SW TMI+ Y A +L
Sbjct: 234 LVFMYGRFGK---------LEVARELFDIMP--ARDDVSWNTMISCYASRGLWDEAFRLF 282
Query: 241 DGMTHPIA----VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
M + WN + G + G ++ A F +M ++ IQ+D ++A +
Sbjct: 283 GCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAV-IQLDSVAMVVGLNACSHI 341
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G G+++H + +RT + +V N LIT Y++C L A +F K+ + L++W
Sbjct: 342 GAVKLGKEIHGHAVRTCFDVFD----NVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITW 397
Query: 357 NAILSGYINARRLEEAKFIFREV 379
NA+LSG+ + R EE F+ RE+
Sbjct: 398 NAMLSGFAHMDRSEEVSFLLREM 420
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 163/391 (41%), Gaps = 52/391 (13%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
A+H I + + + + N L+ +Y + + A LFD P D S T++S Y++ G
Sbjct: 214 AVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRG 273
Query: 86 NVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
A +LF R+ I +N + H + A+KLF +M R D +
Sbjct: 274 LWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQM-RAVIQLDSVAMV 332
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
L A S I + +++H V+ +C+
Sbjct: 333 VGLNACSHIGAVKLG-KEIHGHAVR--------------TCF------------------ 359
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+FD T+I Y R DL A L + + WNAM+SG+
Sbjct: 360 -DVFDNVK---------NTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDR 409
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
EE R+M G++ + T S++ G++ H Y+++ Q + +L
Sbjct: 410 SEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLW 469
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
N+L+ Y++ GK+++AR+VFD + +D V++ +++ GY + E A +F E+ N
Sbjct: 470 --NSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLN 527
Query: 384 L----LTWTVMISGLAESGFGEESLKLFNQM 410
+ +T ++ + SG + LF +M
Sbjct: 528 IKPDHVTMVAVLIACSHSGLVAQGQVLFRKM 558
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 144/354 (40%), Gaps = 85/354 (24%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+DS M + L +H A + L + IH H + T F + ++N LI +Y + ++ +A+
Sbjct: 326 LDSVAMV-VGLNACSHIGAVK-LGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAY 383
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
LF K + + I++NAM+ ++H +D
Sbjct: 384 LLFRK---------------------------------IDEKGLITWNAMLSGFAH-MDR 409
Query: 121 HAAVKLFVR-MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
V +R M R+G P+ + +++L + IA + H ++ HC +VK
Sbjct: 410 SEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQ-HGKEFHCYMVK----------- 457
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
+ +L+ W +++ Y R+ + ARK+
Sbjct: 458 ----------REEQFKGYLLL-------------------WNSLVEMYSRSGKVLEARKV 488
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D ++ V + +MI GY G E A F +M + I+ D T +++ A ++GL
Sbjct: 489 FDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLV 548
Query: 300 NCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
G+ L ++ + P EH+ + ++ + + G L +A+EV M +
Sbjct: 549 AQGQVLFRKMIEVYGIDPRVEHY-----SCMVDLFGRAGLLDKAKEVITGMSCK 597
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 143/311 (45%), Gaps = 60/311 (19%)
Query: 107 YNAMVKA-YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
YN ++ A YS N AV +F ++R G + D +S VL ++ + + +Q+HC
Sbjct: 81 YNNIIYALYSSN--AKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLG-KQIHCV 137
Query: 166 VVKWGV---MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
V G+ + V S L + SCY C SARKLFDE +
Sbjct: 138 GVVTGLDKNVSVCSSLIQMYSCYDVC-------------SARKLFDEFG---GNGCVLNA 181
Query: 223 MIAGYVRNDDLASARKLLDGMTH--PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
MI YV+ D+++ARKL D M +W AMISGY + EA FR+M ++
Sbjct: 182 MIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVK 241
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
DE +++SA + G + G +H Y+ + + I+ + N+LI Y K G + +
Sbjct: 242 PDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSK----IVPLYNSLIDMYAKSGNIRK 297
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
A E+F+ M + ++TWT MI+GLA G G
Sbjct: 298 ALELFENMK-------------------------------HKTIITWTTMIAGLALHGLG 326
Query: 401 EESLKLFNQMK 411
+E+L++F+ M+
Sbjct: 327 KEALRVFSCME 337
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 145/344 (42%), Gaps = 54/344 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH + TG + + LI +Y ++ A LFD+ ++ AY
Sbjct: 130 LGKQIHCVGVVTGLDKNVSVCSSLIQMY-SCYDVCSARKLFDEFGGNGCV-LNAMIVAYV 187
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G+V A KLF++ +D S+ AM+ Y+ + + A+KLF RM+ + PD +
Sbjct: 188 KVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAI 247
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
VL A + + LH L + YI
Sbjct: 248 LAVLSACADLG-------ALH--------------LGEWIHNYI---------------- 270
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
++ LS K P + ++I Y ++ ++ A +L + M H + W MI+G HG
Sbjct: 271 -----EKHKLS-KIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHG 324
Query: 263 LYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQPS-EH 319
L +EA F M ++ +E T+ +++SA + GL GR + R ++P EH
Sbjct: 325 LGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEH 384
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
+ +I + G L +A+E+ +MP + W ++L+
Sbjct: 385 Y-----GCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAA 423
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 152/359 (42%), Gaps = 82/359 (22%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +HAH++ + F HHL S+ L+S Y+
Sbjct: 184 LGRQLHAHVIKSWF----------------------GHHLT---------SQNALISMYT 212
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFS 141
G ++ A +F P +D IS+ M+ Y A+ LF + R G + P+ F
Sbjct: 213 NFGQIEHASNVFTRIPT--KDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 270
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F +V A S + E E+ +Q+H VK+G+ N C +C
Sbjct: 271 FGSVFSACSSLLELEYG-KQVHGMCVKFGLR-----RNVFAGCSLC-------------- 310
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
Y + L SA+ + +P V+WNA+I+ + +
Sbjct: 311 -----------------------DMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 347
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EA D FR+M +G+ D TY SL+ + N GRQ+H+Y+++
Sbjct: 348 GDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKE---- 403
Query: 322 LSVNNALITFYTKCGKLVQAREVF-DKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
++V N+L+T YTKC L A VF D +LVSWNAILS + ++ E +++E+
Sbjct: 404 ITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEM 462
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 203 ARKLFDEAPLSQKDEPS---WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
A+K+ D L +PS MI Y + + ARK+ D M P V+W +MISGY
Sbjct: 84 AKKIHDHV-LKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYS 142
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++G +A + +M G D+ T+ S+I A + G + GRQLHA+V+++ H
Sbjct: 143 QNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWF--GHH 200
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
L+ NALI+ YT G++ A VF ++P +DL+SW +++GYI EA ++FR++
Sbjct: 201 --LTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDL 258
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 83/392 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H + G R L D+Y K +P A F + NPDI
Sbjct: 287 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDI------------ 334
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+S+NA++ A++ N D + A+ F +M G PD ++
Sbjct: 335 ---------------------VSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYI 373
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++L +Q+H +VK G +V N+LL+ Y C+ + A
Sbjct: 374 SLLCTCGSPVRLN-QGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSH---------LHDA 423
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+F + RN +L V+WNA++S ++
Sbjct: 424 LNVFRDIS-----------------RNANL---------------VSWNAILSACLQKKQ 451
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
E F +++MH G + D T T+L+ G Q+H Y +++ + +S
Sbjct: 452 EGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILD----VS 507
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP--- 380
V N LI Y KCG L AR+VFD D+VSW++++ GY EA +FR +
Sbjct: 508 VCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG 567
Query: 381 -ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ N +T+ +S + G EE +L+ M+
Sbjct: 568 VQPNEVTYLGALSACSHIGLVEEGWRLYKSME 599
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ P I + +++ Y G++K A K+F+ + L + +S+ +M+ YS N
Sbjct: 90 HVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDT--MQLPNVVSWTSMISGYSQNGQA 147
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
+ A+ ++++M R G PD +F +V+ A + + + +QLH V+K + N
Sbjct: 148 NDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLG-RQLHAHVIKSWFGHHLTSQNA 206
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+S Y + A +F P KD SW TM
Sbjct: 207 LISMYTNFGQ---------IEHASNVFTRIP--TKDLISWGTM----------------- 238
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLF 299
I+GY++ G EA FR + G Q +E+ + S+ SA +
Sbjct: 239 --------------ITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLEL 284
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G+Q+H ++ ++ + + +L Y K G L A+ F ++ D+VSWNAI
Sbjct: 285 EYGKQVHGMCVKFGLRRN----VFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAI 340
Query: 360 LSGYINARRLEEAKFIFREV 379
++ + + EA FR++
Sbjct: 341 IAAFADNGDANEAIDFFRQM 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 157/395 (39%), Gaps = 88/395 (22%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF-DKTPNPDIFSRTTLLSAYS 82
R IH++I+ GF + N L+ +Y K S++ A ++F D + N ++
Sbjct: 388 GRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANL----------- 436
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+S+NA++ A +L+ M G PD +
Sbjct: 437 ----------------------VSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITI 474
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+T+LG + + Q+HC +K G++ SV N L+ Y C S +
Sbjct: 475 TTLLGTCAELTSLGVG-NQVHCYSIKSGLILDVSVCNGLIDMYAKCGS---------LKH 524
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR +FD +N D+ V+W+++I GY + G
Sbjct: 525 ARDVFDS------------------TQNLDI---------------VSWSSLIVGYAQCG 551
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV-LRTVVQPS-EHF 320
L EA + FR M ++G+Q +E TY +SA + GL G +L+ + + P+ EHF
Sbjct: 552 LGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHF 611
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YINARRLEEAKFIF 376
+ ++ + G L +A K + D+ +W +L+ + N E
Sbjct: 612 -----SCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNI 666
Query: 377 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ N ++ + A +G EE KL MK
Sbjct: 667 LKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMK 701
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 150/321 (46%), Gaps = 17/321 (5%)
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ 160
+D +++NAMV YS N A+ LF +M+ + D ++S+V+ S A+ + C+
Sbjct: 13 FKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVI---SGYAQRGFGCE 69
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCAS-STLVESPVLMASARK--LFDEAPLSQKDE 217
+ G C P+V+ TL+S CAS L+ + K L E D
Sbjct: 70 AMDVFRQMCGCSCRPNVV-TLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDL 128
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGM--THPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+I Y + L AR + D + V W MI GY ++G A F +M
Sbjct: 129 AGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMF 188
Query: 276 SMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
I +++T + ++ A G+Q+HAYVLR S+ +L V N LI Y+
Sbjct: 189 KFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSD--VLFVANCLIDMYS 246
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTV 389
K G + A+ VFD M R+ +SW ++L+GY E+A +F E+ + L +T+ V
Sbjct: 247 KSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLV 306
Query: 390 MISGLAESGFGEESLKLFNQM 410
++ + SG + + LF +M
Sbjct: 307 VLYACSHSGMVDRGIDLFYRM 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 143/319 (44%), Gaps = 51/319 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N D+ L+ Y+ ++++A +F+ RD +++ M+ Y+ D + A++LF
Sbjct: 125 NDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLF 184
Query: 128 VRMKR--DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
M + + P+ F+ S VL A + +A + +Q+H V++
Sbjct: 185 SEMFKFDNCIVPNDFTISCVLMACARLAALRFG-KQIHAYVLR----------------- 226
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
+ ++S VL + +I Y ++ D+ +A+ + D M+
Sbjct: 227 -----RSRIDSDVLFVA------------------NCLIDMYSKSGDVDTAQVVFDSMSK 263
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
A++W ++++GY HG E+AF F +M + +D T+ ++ A ++G+ + G L
Sbjct: 264 RNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDL 323
Query: 306 HAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSG 362
+ + VV P EH+ + + + G+L +A + + M + V W A+LS
Sbjct: 324 FYRMSKDFVVDPGVEHYA-----CMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSA 378
Query: 363 YINARRLEEAKFIFREVPE 381
+E A+F +++ E
Sbjct: 379 CRTHSNVELAEFAAKKLLE 397
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 42/188 (22%)
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+ A K+ + M V WNAM++GY ++G +E+A F KM I++D T++S+IS
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 293 SFNTGLFNC------------------------------------GRQLHAYVLRTVVQP 316
G F C G++ H Y ++ +++
Sbjct: 61 YAQRG-FGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKG 119
Query: 317 ---SEHFILSVNNALITFYTKCGKLVQAREVFDKM--PVRDLVSWNAILSGYINARRLEE 371
++ L+ NALI Y KC L AR +FD++ RD+V+W ++ GY
Sbjct: 120 EHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANH 179
Query: 372 AKFIFREV 379
A +F E+
Sbjct: 180 ALQLFSEM 187
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLA 395
A +V+++M +D+V+WNA+++GY R E+A +F ++ E +++TW+ +ISG A
Sbjct: 3 DASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYA 62
Query: 396 ESGFGEESLKLFNQM 410
+ GFG E++ +F QM
Sbjct: 63 QRGFGCEAMDVFRQM 77
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 145/335 (43%), Gaps = 82/335 (24%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ Y+ G++ A + F + +++I+++AMV Y+ D A+KLF +M G
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGD--KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 137 PDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
P F+ V+ A S L A E +Q+H K G VL+ ++ Y C S
Sbjct: 318 PSEFTLVGVINACSDLCAVVEG--KQMHSFAFKLGFGLQLYVLSAVVDMYAKCGS----- 370
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
LA ARK + + P V W ++I
Sbjct: 371 -------------------------------------LADARKGFECVQQPDVVLWTSII 393
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+GYV++G YE + + KM + +E T S++ A + + G+Q+HA +++ +
Sbjct: 394 TGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFK 453
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + +AL YTKCG L +F +MP RD++SWNA
Sbjct: 454 ----LEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNA----------------- 492
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
MISGL+++G G ++L+LF +M
Sbjct: 493 --------------MISGLSQNGHGNKALELFEKM 513
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 59 AHHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
AH + KT + D++ ++LL+ Y G V A KLF+ P R+T+S+ M+ Y+ +
Sbjct: 140 AHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPE--RNTVSWATMISGYASS 197
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
AV++F M+R+ + F+ ++VL A++ + +Q+H +K G++ + SV
Sbjct: 198 DIADKAVEVFELMRREEEIQNEFALTSVLSALTSDV-FVYTGRQVHSLAIKNGLLAIVSV 256
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N L++ Y C S + A + F+ + K+ +W+ M+ GY + D A
Sbjct: 257 ANALVTMYAKCGS---------LDDAVRTFEFS--GDKNSITWSAMVTGYAQGGDSDKAL 305
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
KL F KMHS G+ E+T +I+A +
Sbjct: 306 KL-------------------------------FNKMHSSGVLPSEFTLVGVINACSDLC 334
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
G+Q+H++ + L V +A++ Y KCG L AR+ F+ + D+V W
Sbjct: 335 AVVEGKQMHSFAFKL----GFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWT 390
Query: 358 AILSGYI 364
+I++GY+
Sbjct: 391 SIITGYV 397
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 159/366 (43%), Gaps = 82/366 (22%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R +HA IL TG + + N +++Y K++++ +A LFD + D
Sbjct: 30 GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDND------------- 76
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN---LDGHAAVKLFVRMKR-DGFAPDP 139
+D +S+N+++ A+S N A+ LF RM R + P+
Sbjct: 77 ------------------KDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNA 118
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+ + V A S +++ +Q H VK G V ++LL+ Y C + + +
Sbjct: 119 HTLAGVFSAASNLSDVV-AGKQAHSVAVKTGCSGDVYVGSSLLNMY--CKTGFVFD---- 171
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
ARKLFD P +++ SW TMI+GY +D
Sbjct: 172 ---ARKLFDRMP--ERNTVSWATMISGYASSD---------------------------- 198
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
+ ++A + F M +E+ TS++SA + GRQ+H+ ++ +
Sbjct: 199 ---IADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLA--- 252
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
I+SV NAL+T Y KCG L A F+ ++ ++W+A+++GY ++A +F ++
Sbjct: 253 -IVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKM 311
Query: 380 PERNLL 385
+L
Sbjct: 312 HSSGVL 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 135/361 (37%), Gaps = 84/361 (23%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H+ GF L + + ++D+Y K ++ A F+ PD+
Sbjct: 339 GKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDV------------ 386
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+ + +++ Y N D + L+ +M+ + P+ + +
Sbjct: 387 ---------------------VLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMA 425
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+VL A S +A + +Q+H ++K+G + + L + Y C S
Sbjct: 426 SVLRACSSLAALD-QGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS------------- 471
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
D+ L PS ++WNAMISG ++G
Sbjct: 472 ---LDDGYLIFWRMPSRDV--------------------------ISWNAMISGLSQNGH 502
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEHFI 321
+A + F KM GI+ D T+ +L+SA + GL + G + + + EH+
Sbjct: 503 GNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYA 562
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREVP 380
++ ++ GKL +A+E + V L W +L N R E + ++
Sbjct: 563 -----CMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLV 617
Query: 381 E 381
E
Sbjct: 618 E 618
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 227 YVRNDDLASARKLLDGMTH--PIAVAWNAMISGYVRHGLYEE---AFDTFRKM-HSMGIQ 280
Y + + L+ A L D + V+WN++I+ + ++ A FR+M + +
Sbjct: 56 YAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVI 115
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ +T + SA+ N G+Q H+ ++T + V ++L+ Y K G +
Sbjct: 116 PNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVY----VGSSLLNMYCKTGFVFD 171
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAE 396
AR++FD+MP R+ VSW ++SGY ++ ++A +F RE +N T ++S L
Sbjct: 172 ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTS 231
Query: 397 SGF 399
F
Sbjct: 232 DVF 234
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 165/365 (45%), Gaps = 54/365 (14%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D ++L A N S L + +HA L + F ++++ L+D+Y K Y
Sbjct: 108 DHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRA 167
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+FD S T ++S Y+ +G A +LF +P ++ ++ A++ + + +
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELFRESP--FKNLYAWTALISGLVQSGNAN 225
Query: 122 AAVKLFVRMKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ LFV M+R+G + DP S+V+GA + A E +Q+HC V+ G + N
Sbjct: 226 DALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELG-KQVHCVVITLGYESCLFISNA 284
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y C+ + +A+ +F E + +KD SWT++I
Sbjct: 285 LVDMYAKCSD---------VVAAKYIFCE--MRRKDVVSWTSIIV--------------- 318
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
G +HGL EEA + M G++ +E T+ LI A + GL +
Sbjct: 319 ----------------GTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVS 362
Query: 301 CGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWN 357
GR L ++ ++PS +H+ L+ +++ G L +A + MPV+ D +W
Sbjct: 363 KGRALFKSMVEDFGIRPSLQHY-----TCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWA 417
Query: 358 AILSG 362
A+LS
Sbjct: 418 ALLSA 422
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 175/391 (44%), Gaps = 36/391 (9%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
A+ + + + G R P I +L KS HH F KT L+ AY G
Sbjct: 11 ALKSQLFSLG-RKNPFIAKKLHAQIIKSG--LNHHHPFPKT----------LIDAYGKCG 57
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
+K A KLF+A P +D +++ ++ A + + H A + + + +G PD F FS++
Sbjct: 58 LLKDALKLFDALPQ--QDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSL 115
Query: 146 LGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
+ A + + +QLH + V ++L+ Y E P R
Sbjct: 116 IKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMY------AKFELP---DYGR 166
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
+FD + + SWT MI+GY R+ A +L AW A+ISG V+ G
Sbjct: 167 AVFDS--IFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNA 224
Query: 265 EEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+A F +M G+ + D +S++ A N+ + G+Q+H V+ + L
Sbjct: 225 NDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESC----LF 280
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV---- 379
++NAL+ Y KC +V A+ +F +M +D+VSW +I+ G EEA ++ ++
Sbjct: 281 ISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAG 340
Query: 380 PERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ N +T+ +I + G + LF M
Sbjct: 341 VKPNEVTFVGLIYACSHVGLVSKGRALFKSM 371
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 6/196 (3%)
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
P T+I Y + L A KL D + VAW ++S L +AF +
Sbjct: 44 PFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHE 103
Query: 278 GIQMDEYTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G+Q D + ++SLI A N G + G+QLHA L + + V ++L+ Y K
Sbjct: 104 GLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDD----VVKSSLVDMYAKF 159
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 395
R VFD + +SW A++SGY + R EA +FRE P +NL WT +ISGL
Sbjct: 160 ELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLV 219
Query: 396 ESGFGEESLKLFNQMK 411
+SG ++L LF +M+
Sbjct: 220 QSGNANDALYLFVEMR 235
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 150/332 (45%), Gaps = 57/332 (17%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL------F 127
+ +LS Y + A+KLF PV R+ +S+N M++A D + + + F
Sbjct: 98 QNQILSVYLKCQEAEDAKKLFEELPV--RNVVSWNIMIRASVGRNDENESSGMRLCFSYF 155
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
RM + PD +F+ ++ + + E Q LHC VK G L C++
Sbjct: 156 RRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQ-LHCFTVKVGFD---------LDCFVG 205
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
CA L + +AR++F + S R L
Sbjct: 206 CALVGLYAKCGFVENARRVFCDV------------------------SCRDL-------- 233
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL--FNCGRQL 305
V WN M+S YV + L EEAF F M + DE+T++SL+S + L ++ G+Q+
Sbjct: 234 -VMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQV 292
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H+ VLR Q + +L V +ALI Y K ++ AR VFD+M +R++V+WN ++ G+ N
Sbjct: 293 HSLVLR---QSFDSDVL-VASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
E + +E+ L + IS + S
Sbjct: 349 HGDGNEVMKLVKEMLREGFLPDELTISSIISS 380
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 154/348 (44%), Gaps = 57/348 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F L+ Y+ G V+ A ++F V+ RD + +N MV Y N A ++F
Sbjct: 201 DCFVGCALVGLYAKCGFVENARRVF--CDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNS 258
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M+ D D F+FS++L +S A E + +Q+H V++
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSF----------------- 301
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+S VL+ASA +I Y +++++ AR++ D M+
Sbjct: 302 ------DSDVLVASA-------------------LINMYAKSENIIDARRVFDEMSIRNV 336
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
VAWN MI G+ HG E ++M G DE T +S+IS+ Q+HA+
Sbjct: 337 VAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAF 396
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
++ Q LSV N+LI+ Y+KCG + A + F+ DLV+W +++ Y
Sbjct: 397 AVKLSCQD----FLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGL 452
Query: 369 LEEAKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLFNQM 410
E++ +F ++ P+R + + ++S A G + L F M
Sbjct: 453 AEKSTEMFEKMLSYGIKPDR--IAFLGVLSACAHCGLVTKGLHYFKLM 498
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 62/291 (21%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+ + L++ Y+ + N+ A ++F+ +++R+ +++N M+ + ++ DG+ +KL
Sbjct: 302 DSDVLVASALINMYAKSENIIDARRVFD--EMSIRNVVAWNTMIVGFGNHGDGNEVMKLV 359
Query: 128 VRMKRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
M R+GF PD + S+++ G S I E Q+H VK SV N+L+S
Sbjct: 360 KEMLREGFLPDELTISSIISSCGYASAITET----LQVHAFAVKLSCQDFLSVANSLISA 415
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
Y C S T SA K F+ SQ D +WT++I
Sbjct: 416 YSKCGSIT---------SAFKCFELT--SQPDLVTWTSLIY------------------- 445
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
Y HGL E++ + F KM S GI+ D + ++SA + GL G
Sbjct: 446 ------------AYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKG-- 491
Query: 305 LHAYVLRT----VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
LH + L T +V SEH+ L+ + G + +A E+ MP+
Sbjct: 492 LHYFKLMTNAYQIVPDSEHY-----TCLVDLLGRYGLINEAFEILRSMPIE 537
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 163/371 (43%), Gaps = 69/371 (18%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFV-RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
D N ++++Y + + AA + RM P+ ++F +L + + + ++
Sbjct: 83 DAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLIL-KLCVDHGCKLEGEK 141
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCY-----ICCASSTLVESPVL----------------- 199
H VVK+G + V N+L+ Y I A ES VL
Sbjct: 142 GHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGG 201
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ ARKLFDE + ++D SW MIAGYV DLA+A++L + M + V+WN MI G V
Sbjct: 202 IRDARKLFDE--MYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCV 259
Query: 260 RHG----------------------------------LYEEAFDTFRKMHSMGIQM-DEY 284
R G Y E F +M G M +E
Sbjct: 260 RVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEA 319
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T S+++A N G N G +H+Y+ ++ + + L+T Y KCG + A +V
Sbjct: 320 TLVSVLTACANLGKLNLGLWVHSYIKSNEIK----LDVLLETCLLTMYAKCGAMDLASDV 375
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFG 400
F +MPV+ +VSWN+++ GY ++A +F E+ + N T+ ++S + +G
Sbjct: 376 FVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMV 435
Query: 401 EESLKLFNQMK 411
E F+ M+
Sbjct: 436 MEGWWYFDLMR 446
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 18/341 (5%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +ID Y K+ I A LFD+ D+FS +++ Y + G++ A++LF A P +D
Sbjct: 190 NTMIDGYVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPN--KD 247
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+S+N M+ + A++ F +M DG L A+ + + C ++
Sbjct: 248 VVSWNCMIDGCVRVGNVSLALEFFNQM--DGVVVRNVVSWNSLLALHVRMKNYGECLRMF 305
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+++ G +P+ TL+S CA+ + + + S K +E L E TM
Sbjct: 306 ERMMESG-EAMPNEA-TLVSVLTACANLGKLNLGLWVHSYIK-SNEIKLDVLLETCLLTM 362
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
Y + + A + M V+WN+MI GY HG ++A + F +M G + +E
Sbjct: 363 ---YAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNE 419
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQA 341
T+ ++SA + G+ G + R ++P EH+ ++ + G + +
Sbjct: 420 ATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVEHY-----GCMVDLLARAGFVKNS 474
Query: 342 REVFDKMPVRDLVS-WNAILSGYINARRLEEAKFIFREVPE 381
E+ +K+ V+ + W A+LSG LE A+ + + + E
Sbjct: 475 EELIEKVSVKGGSAMWGALLSGCRTHLDLELAENVAKRLVE 515
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD-TFRKMHSMGIQMDEYTYTSLISAS 293
S+ D + HP A N +I Y+R AF + +M + + + YT+ ++
Sbjct: 71 SSALFFDHLHHPDAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLC 130
Query: 294 FNTGLFNCGRQLHAYVLR------TVVQPS-------------------EHFILSV--NN 326
+ G G + HA V++ V+ S E ++L + N
Sbjct: 131 VDHGCKLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYN 190
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLT 386
+I Y K G + AR++FD+M RD+ SWN +++GY++ L AK +F +P +++++
Sbjct: 191 TMIDGYVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVS 250
Query: 387 WTVMISGLAESGFGEESLKLFNQM 410
W MI G G +L+ FNQM
Sbjct: 251 WNCMIDGCVRVGNVSLALEFFNQM 274
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 79/343 (23%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F L+ YS + A + ++ P T I+ NA++ YS D A+ LF
Sbjct: 317 DSDLFVAVGLIDLYSKCEMMDDARRAYDLMP-TKDHIIAGNALISGYSQCGDDEQAISLF 375
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+ + + + STVL +++ + + + C+Q+H +K G+ V+N+LL Y
Sbjct: 376 FELHHENIDFNQTTLSTVLKSVASLQQIKV-CKQIHTLSIKCGIYSDFYVINSLLDTYGK 434
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C+ + A K+F+E +W +DL
Sbjct: 435 CSH---------IDEASKIFEE--------RTW----------EDL-------------- 453
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
VA+ +MI+ Y +HG EEA + +M I+ D + +SL++A N + G+QLH
Sbjct: 454 -VAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHV 512
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ ++ + +N+L+ Y KCG + A F ++P R +VSW+A
Sbjct: 513 HAIKFGFMSD----IFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSA--------- 559
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
MI GLA+ G G+E+L +FNQM
Sbjct: 560 ----------------------MIGGLAQHGHGKEALIMFNQM 580
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 179/420 (42%), Gaps = 49/420 (11%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP-DIFSRTTLLSAYSAAG 85
+H H++ GF +RN L+ Y S YA +L D++ P + S + L+S Y G
Sbjct: 3 LHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNG 62
Query: 86 NVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
K A FN T + ++ ++KA S D + K+ GF D F +
Sbjct: 63 FHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSN 122
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVL-- 199
T++ + C Q +G++ P V+ N L SC++ S L E+ L
Sbjct: 123 TLVVMYA-------KCGQFSDSKKLFGMILEPGVVSWNALFSCHV--QSDFLAETVDLFK 173
Query: 200 -MASARKLFDEAPLS---------------------------QKDEPSWTTMIAGYVRND 231
M + +E LS D+ S ++ Y +
Sbjct: 174 RMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAG 233
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ A + M HP V+WNA+I+G V H + A +M G + +T +S +
Sbjct: 234 RIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALK 293
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A GL + GRQ+H+ ++ + S+ F+ LI Y+KC + AR +D MP +
Sbjct: 294 ACAAMGLKDLGRQIHSCSVK-IDSDSDLFVAV---GLIDLYSKCEMMDDARRAYDLMPTK 349
Query: 352 D-LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
D +++ NA++SGY E+A +F E+ N+ +S + +S + +K+ Q+
Sbjct: 350 DHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQI 409
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + +LL Y ++ A K+F T D ++Y +M+ AYS + D A+KL+++
Sbjct: 421 DFYVINSLLDTYGKCSHIDEASKIFEER--TWEDLVAYTSMITAYSQHGDAEEALKLYLQ 478
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ PDPF S++L A + ++ E +QLH +K+G M N+L++ Y C
Sbjct: 479 MQVADIKPDPFVCSSLLNACANLSAYE-QGKQLHVHAIKFGFMSDIFASNSLVNMYAKCG 537
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + A + F E P Q+ SW+
Sbjct: 538 S---------IEDADRAFSEIP--QRGIVSWS---------------------------- 558
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAY 308
AMI G +HG +EA F +M + + T S++ A + GL N G+Q
Sbjct: 559 ---AMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETM 615
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ ++P++ + +I + GKL +A E+ + +P D W A+L
Sbjct: 616 EEKFGIKPTQEH----HACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLG 665
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 150/381 (39%), Gaps = 38/381 (9%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ + +HA + +GF + N L+ +Y K + LF P + S L S +
Sbjct: 100 NMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCH 159
Query: 82 SAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
+ + LF + S + ++ A + DG + + + G D
Sbjct: 160 VQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQ 219
Query: 140 FSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLN---------------- 179
FS + ++ + E + +H D V W + VL+
Sbjct: 220 FSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKS 279
Query: 180 -------TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
TL S CA+ L + + S D S D +I Y + +
Sbjct: 280 GSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKID----SDSDLFVAVGLIDLYSKCEM 335
Query: 233 LASARKLLDGM-THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ AR+ D M T +A NA+ISGY + G E+A F ++H I ++ T ++++
Sbjct: 336 MDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLK 395
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ + +Q+H ++ + + I N+L+ Y KC + +A ++F++
Sbjct: 396 SVASLQQIKVCKQIHTLSIKCGIYSDFYVI----NSLLDTYGKCSHIDEASKIFEERTWE 451
Query: 352 DLVSWNAILSGYINARRLEEA 372
DLV++ ++++ Y EEA
Sbjct: 452 DLVAYTSMITAYSQHGDAEEA 472
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 43/349 (12%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
DIF + L+ YS G + A KLF+ P R+ +S+ +M+ Y N AV LF
Sbjct: 118 GSDIFVASALIDMYSKCGYLNDARKLFDEIPE--RNVVSWTSMISGYVQNERAREAVFLF 175
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++ D + ++G + D V G CV S +C
Sbjct: 176 ----KEFLLVDETDYDEIVGVGVGV------------DSVLLG--CVIS------ACARV 211
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C S V V + +K F E L+ + T++ Y + +++ +RK+ DGM
Sbjct: 212 CVKS--VTECVHGLAVKKGF-EGCLAVGN-----TLMDAYAKCGEISVSRKVFDGMEETD 263
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLH 306
+WN++I+ Y ++GL EAF F M G ++ + T ++++ A ++G G+ +H
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH 323
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
V++ ++ + L V +++ Y KCG++ AR+ FD++ +++ SW +++GY
Sbjct: 324 DQVVKMELEDN----LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMH 379
Query: 367 RRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EA +F E+ + N +T+ +++ + +G +E FN+MK
Sbjct: 380 GHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH--A 307
+WN++I+ + R G +A F M + + + T+ I + + G+Q+H A
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+V S+ F+ S ALI Y+KCG L AR++FD++P R++VSW +++SGY+
Sbjct: 113 FVFG---YGSDIFVAS---ALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 368 RLEEAKFIFRE 378
R EA F+F+E
Sbjct: 167 RAREAVFLFKE 177
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 175 PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
P + + S Y CA + + + +F + L I Y + L
Sbjct: 90 PCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASAL-----------IDMYSKCGYLN 138
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI---- 290
ARKL D + V+W +MISGYV++ EA F++ + +DE Y ++
Sbjct: 139 DARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEF----LLVDETDYDEIVGVGV 194
Query: 291 ---SASFNTGLFNCGRQLHAYVLRTV----VQPSEHFILSVNNALITFYTKCGKLVQARE 343
S + C R V V V+ L+V N L+ Y KCG++ +R+
Sbjct: 195 GVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK 254
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLAESG 398
VFD M D+ SWN++++ Y EA +F ++ +R N +T + ++ A SG
Sbjct: 255 VFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSG 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 66/310 (21%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
TL+ AY+ G + ++ K+F+ T D S+N+++ Y+ N G
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEET--DVCSWNSLIAVYAQN----------------G 278
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ + FS L D+VK G + +V TL + + CA S +
Sbjct: 279 LSVEAFS--------------------LFSDMVKRGEVRYNAV--TLSAVLLACAHSGAL 316
Query: 195 ESPVLMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ + + D+ + ++ T+++ Y + + ARK D + +W
Sbjct: 317 QI------GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWT 370
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLR 311
M++GY HG +EA F +M GI+ + T+ S+++A + GL G +
Sbjct: 371 VMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCE 430
Query: 312 TVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS-------- 361
V+P EH+ + ++ + G L +A + +M V+ D + W ++L
Sbjct: 431 FDVEPGIEHY-----SCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNV 485
Query: 362 --GYINARRL 369
G I+AR+L
Sbjct: 486 ELGEISARKL 495
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 43/349 (12%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
DIF + L+ YS G + A KLF+ P R+ +S+ +M+ Y N AV LF
Sbjct: 118 GSDIFVASALIDMYSKCGYLNDARKLFDEIPE--RNVVSWTSMISGYVQNERAREAVFLF 175
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++ D + ++G + D V G CV S +C
Sbjct: 176 ----KEFLLVDETDYDEIVGVGVGV------------DSVLLG--CVIS------ACARV 211
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C S V V + +K F E L+ + T++ Y + +++ +RK+ DGM
Sbjct: 212 CVKS--VTECVHGLAVKKGF-EGCLAVGN-----TLMDAYAKCGEISVSRKVFDGMEETD 263
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLH 306
+WN++I+ Y ++GL EAF F M G ++ + T ++++ A ++G G+ +H
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH 323
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
V++ ++ + L V +++ Y KCG++ AR+ FD++ +++ SW +++GY
Sbjct: 324 DQVVKMELEDN----LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMH 379
Query: 367 RRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EA +F E+ + N +T+ +++ + +G +E FN+MK
Sbjct: 380 GHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH--A 307
+WN++I+ + R G +A F M + + + T+ I + + G+Q+H A
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+V S+ F+ S ALI Y+KCG L AR++FD++P R++VSW +++SGY+
Sbjct: 113 FVFG---YGSDIFVAS---ALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 368 RLEEAKFIFRE 378
R EA F+F+E
Sbjct: 167 RAREAVFLFKE 177
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 175 PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
P + + S Y CA + + + +F + L I Y + L
Sbjct: 90 PCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASAL-----------IDMYSKCGYLN 138
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI---- 290
ARKL D + V+W +MISGYV++ EA F++ + +DE Y ++
Sbjct: 139 DARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEF----LLVDETDYDEIVGVGV 194
Query: 291 ---SASFNTGLFNCGRQLHAYVLRTV----VQPSEHFILSVNNALITFYTKCGKLVQARE 343
S + C R V V V+ L+V N L+ Y KCG++ +R+
Sbjct: 195 GVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK 254
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLAESG 398
VFD M D+ SWN++++ Y EA +F ++ +R N +T + ++ A SG
Sbjct: 255 VFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSG 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 66/310 (21%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
TL+ AY+ G + ++ K+F+ T D S+N+++ Y+ N G
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEET--DVCSWNSLIAVYAQN----------------G 278
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ + FS L D+VK G + +V TL + + CA S +
Sbjct: 279 LSVEAFS--------------------LFSDMVKRGEVRYNAV--TLSAVLLACAHSGAL 316
Query: 195 ESPVLMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ + + D+ + ++ T+++ Y + + ARK D + +W
Sbjct: 317 QI------GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWT 370
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLR 311
M++GY HG +EA F +M GI+ + T+ S+++A + GL G +
Sbjct: 371 VMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCE 430
Query: 312 TVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS-------- 361
V+P EH+ + ++ + G L +A + +M V+ D + W ++L
Sbjct: 431 FDVEPGIEHY-----SCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNV 485
Query: 362 --GYINARRL 369
G I+AR+L
Sbjct: 486 ELGEISARKL 495
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 175/398 (43%), Gaps = 74/398 (18%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ Y+ G V L+E F+ ++D + +M+ +++ N + A++LF M R+G
Sbjct: 378 LVNMYAKIGGVGLSELAFSEMK-NMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVK 436
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA------- 189
PD + +G++ I Q+H ++K G++ +V +L + Y C
Sbjct: 437 PDEY----CIGSLLSIMSSLSLGSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYE 492
Query: 190 --SSTLVESPVLMAS-------------ARKLFDEAPLSQKDEPSWTTMIA--------- 225
+V+ V AS A +LF E L Q+ P T+I+
Sbjct: 493 VFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEM-LYQEVVPDHITLISILTACADLR 551
Query: 226 -----------------------------GYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
Y + L+ ARK+ D + H A A ++++S
Sbjct: 552 LLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVS 611
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
GY ++GL EE+F F M +D +T TS++ A+ + G QLHAY+ + +Q
Sbjct: 612 GYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQA 671
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI----NARRLEEA 372
+SV ++L+T Y+KCG + R+ FD + DL+ W +++ Y A L
Sbjct: 672 D----VSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHGKGADALAAY 727
Query: 373 KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + E E + +T+ ++S + SG EE+ N M
Sbjct: 728 ELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSM 765
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 54/359 (15%)
Query: 52 KSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
+++ I +AH L IF +L+ Y + ++ LA KLF+ +T +S+N M+
Sbjct: 51 RNTKILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDT--ITQPSIVSWNVMI 108
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV 171
Y N ++++F RM GF PD FS+ +VL A + + Q VVK G
Sbjct: 109 SGYVRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSL-VVKNGF 167
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
+ SS V+ T M+ + +N
Sbjct: 168 L-----------------SSGYVQ-------------------------TQMVDMFCKNC 185
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ + A + + + +WNA+IS V++G + A + F +M + + YT+ S+++
Sbjct: 186 NFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILT 245
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A G+ +H ++ ++ F V A++ Y K G + +A F +M V+
Sbjct: 246 ACCALKEMQIGKGVHGLAIKC--GATDVF---VETAIVDLYAKFGCMSEAYRQFSQMQVQ 300
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKL 406
++VSW AI+SG++ A +F+++ E N T T ++S A+ EE+ ++
Sbjct: 301 NVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQI 359
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 157/428 (36%), Gaps = 122/428 (28%)
Query: 25 RAIHAHILTTGFRLTPLI-RNRLIDIYCKSSNIPYAHHLFDKTPN--------------- 68
+ +HAH+L T + + + + LI +YCKSS++ AH LFD
Sbjct: 54 KILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVR 113
Query: 69 --------------------PDIFSRTTLLSAYSA------------------------- 83
PD FS ++LSA A
Sbjct: 114 NSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYV 173
Query: 84 --------AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
N +E L + + S+NA++ N + A+ LF M R
Sbjct: 174 QTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASL 233
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
P+ ++F ++L A + E + + +H +K C A+ VE
Sbjct: 234 MPNSYTFPSILTACCALKEMQIG-KGVHGLAIK------------------CGATDVFVE 274
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
T ++ Y + ++ A + M V+W A+I
Sbjct: 275 -------------------------TAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAII 309
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
SG+V+ A F+ M +G +++ YT TS++SA L +Q+H+ VL+ +
Sbjct: 310 SGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLI 369
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYI----NARRLE 370
+ + V AL+ Y K G + + F +M ++D W ++LS + + R LE
Sbjct: 370 LN----VKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALE 425
Query: 371 EAKFIFRE 378
+ RE
Sbjct: 426 LFTVMLRE 433
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 121/288 (42%), Gaps = 53/288 (18%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ YS G++ LA K+F+ P +D + +++V Y+ N + LF M R+
Sbjct: 578 LVNMYSKCGSLSLARKVFDILP--HKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDET 635
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
D F+ +++LGA SL+ + + QLH + K G+
Sbjct: 636 VDAFTITSILGAASLLCQSDIG-TQLHAYIEKLGL------------------------- 669
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
Q D ++++ Y + + RK D + P + W ++I
Sbjct: 670 -----------------QADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLIL 712
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQ 315
Y +HG +A + M S G++ D T+ ++SA ++GL L++ + +
Sbjct: 713 SYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKIT 772
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
PS H+ ++ + G+L +A + MPV + + W +L+
Sbjct: 773 PSHRHYA-----CIVDILGRSGRLREAESFINNMPVEPNALIWGTLLA 815
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 79/343 (23%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F L+ YS + A + ++ P T I+ NA++ YS D A+ LF
Sbjct: 317 DSDLFVAVGLIDLYSKCEMMDDARRAYDLMP-TKDHIIAGNALISGYSQCGDDEQAISLF 375
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+ + + + STVL +++ + + + C+Q+H +K G+ V+N+LL Y
Sbjct: 376 FELHHENIDFNQTTLSTVLKSVASLQQIKV-CKQIHTLSIKCGIYSDFYVINSLLDTYGK 434
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C+ + A K+F+E +W +DL
Sbjct: 435 CSH---------IDEASKIFEER--------TW----------EDL-------------- 453
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
VA+ +MI+ Y +HG EEA + +M I+ D + +SL++A N + G+QLH
Sbjct: 454 -VAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHV 512
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ ++ + +N+L+ Y KCG + A F ++P R +VSW+A
Sbjct: 513 HAIKFGFMSD----IFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSA--------- 559
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
MI GLA+ G G+E+L +FNQM
Sbjct: 560 ----------------------MIGGLAQHGHGKEALIMFNQM 580
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 179/420 (42%), Gaps = 49/420 (11%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP-DIFSRTTLLSAYSAAG 85
+H H++ GF +RN L+ Y S YA +L D++ P + S + L+S Y G
Sbjct: 3 LHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNG 62
Query: 86 NVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
K A FN T + ++ ++KA S D + K+ GF D F +
Sbjct: 63 FHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSN 122
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVL-- 199
T++ + C Q +G++ P V+ N L SC++ S L E+ L
Sbjct: 123 TLVVMYA-------KCGQFSDSKKLFGMILEPGVVSWNALFSCHV--QSDFLAETVDLFK 173
Query: 200 -MASARKLFDEAPLS---------------------------QKDEPSWTTMIAGYVRND 231
M + +E LS D+ S ++ Y +
Sbjct: 174 RMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAG 233
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ A + M HP V+WNA+I+G V H + A +M G + +T +S +
Sbjct: 234 RIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALK 293
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A GL + GRQ+H+ ++ + S+ F+ LI Y+KC + AR +D MP +
Sbjct: 294 ACAAMGLKDLGRQIHSCSVK-IDSDSDLFVAV---GLIDLYSKCEMMDDARRAYDLMPTK 349
Query: 352 D-LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
D +++ NA++SGY E+A +F E+ N+ +S + +S + +K+ Q+
Sbjct: 350 DHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQI 409
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + +LL Y ++ A K+F T D ++Y +M+ AYS + D A+KL+++
Sbjct: 421 DFYVINSLLDTYGKCSHIDEASKIFEER--TWEDLVAYTSMITAYSQHGDAEEALKLYLQ 478
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ PDPF S++L A + ++ E +QLH +K+G M N+L++ Y C
Sbjct: 479 MQVADIKPDPFVCSSLLNACANLSAYE-QGKQLHVHAIKFGFMSDIFASNSLVNMYAKCG 537
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + A + F E P Q+ SW+
Sbjct: 538 S---------IEDADRAFSEIP--QRGIVSWS---------------------------- 558
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAY 308
AMI G +HG +EA F +M + + T S++ A + GL N G+Q
Sbjct: 559 ---AMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETM 615
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ ++P++ + +I + GKL +A E+ + +P D W A+L
Sbjct: 616 EEKFGIKPTQEH----HACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLG 665
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 155/383 (40%), Gaps = 42/383 (10%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ + +HA + +GF + N L+ +Y K + LF P + S L S +
Sbjct: 100 NMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCH 159
Query: 82 SA----AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
A V L +++ + S + ++ A + DG + + + G
Sbjct: 160 VQSDFLAETVDLFKRMVEGK--VRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGL 217
Query: 138 DPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLN-------------- 179
D FS + ++ + E + +H D V W + VL+
Sbjct: 218 DQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMK 277
Query: 180 ---------TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRN 230
TL S CA+ L + + S D S D +I Y +
Sbjct: 278 KSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKID----SDSDLFVAVGLIDLYSKC 333
Query: 231 DDLASARKLLDGM-THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
+ + AR+ D M T +A NA+ISGY + G E+A F ++H I ++ T +++
Sbjct: 334 EMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTV 393
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ + + +Q+H ++ + S+ +++ N+L+ Y KC + +A ++F++
Sbjct: 394 LKSVASLQQIKVCKQIHTLSIKCGIY-SDFYVI---NSLLDTYGKCSHIDEASKIFEERT 449
Query: 350 VRDLVSWNAILSGYINARRLEEA 372
DLV++ ++++ Y EEA
Sbjct: 450 WEDLVAYTSMITAYSQHGDAEEA 472
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 183/426 (42%), Gaps = 70/426 (16%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
S + NL + + + S + A+ IHA I + N LID+Y K + I AHH+
Sbjct: 5 SLNLINLLQSCITNKSLSS--AKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHV 62
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FDK P+ +IFS +LSA+ + N++ A +LF P R+T+S N ++ N
Sbjct: 63 FDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPE--RNTVSLNTIITTMVKNGYERQ 120
Query: 123 AVKLF-VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNT 180
A+ + + M + P +F+TV A + ++ +C ++ H V+K G V N
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGL--KDVNCGRRNHGLVLKVGFDSNIYVSNA 178
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
LL Y C N+D A ++
Sbjct: 179 LLCMYTKCG---------------------------------------LNED---AFRVF 196
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI-----SASFN 295
+G+ P V + M+ G + +E + FR M GI +D + ++++ SF
Sbjct: 197 EGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFG 256
Query: 296 T-----GLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
GL G+Q+H ++ + H N+L+ Y K G + A VF+ +
Sbjct: 257 VCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLC----NSLLDMYAKTGDMDSAENVFENL 312
Query: 349 PVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESL 404
+VSWN ++SGY N E+A F+ + E + +T+ M++ +SG +
Sbjct: 313 DKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGR 372
Query: 405 KLFNQM 410
++F+ M
Sbjct: 373 QIFDCM 378
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 187/431 (43%), Gaps = 88/431 (20%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN---------- 68
+T + IH + GF + N L+D+Y K+ ++ A ++F+
Sbjct: 265 STNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMI 324
Query: 69 -------------------------PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
PD + +L+A +G+VK+ ++F+ ++
Sbjct: 325 SGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDC--MSSPS 382
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
IS+NA++ Y+ + D AV+LF +M+ PD + + +L + + + E +Q+H
Sbjct: 383 LISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAG-KQVH 441
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
K G V ++L++ Y C M ++ +F + LS+ D
Sbjct: 442 AVSQKLGFYDDVYVASSLINVYSKCGK---------MEVSKHVF--SKLSELD------- 483
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
V WN+MI+G+ + L ++A F++M G E
Sbjct: 484 ------------------------VVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSE 519
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
+++ ++ S+ G+Q+HA +++ + + V ++L+ Y KCG + AR
Sbjct: 520 FSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDN----VFVGSSLVEMYCKCGDVGAARY 575
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGF 399
FD MP +++V+WN ++ GY + EA +++++ + + +T+ +++ + S
Sbjct: 576 YFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSAL 635
Query: 400 GEESLKLFNQM 410
+E +++F+ M
Sbjct: 636 VDEGVEIFSSM 646
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 136/295 (46%), Gaps = 53/295 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ ++L++ YS G +++++ +F + ++ D + +N+M+ +S N A+ F R
Sbjct: 452 DVYVASSLINVYSKCGKMEVSKHVF--SKLSELDVVCWNSMIAGFSINSLEQDALACFKR 509
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M++ GF P FSF+T+ + + ++ + QQ+H ++K G V +V
Sbjct: 510 MRQFGFFPSEFSFATIASSCAKLSSL-FQGQQIHAQIIKDGY--VDNVF----------V 556
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S+LVE Y + D+ +AR D M V
Sbjct: 557 GSSLVEM------------------------------YCKCGDVGAARYYFDMMPGKNIV 586
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WN MI GY +G EA ++ M S G + D+ T+ ++++A ++ L + G ++ + +
Sbjct: 587 TWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSM 646
Query: 310 LRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
L+ VV +H+ +I + G+ + + D MP + D + W +LS
Sbjct: 647 LQKFEVVPKLDHY-----TCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLS 696
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 196/452 (43%), Gaps = 74/452 (16%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH+ + +G++ + + L+ Y + I A +F++ + + + +L+ Y
Sbjct: 121 LGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYV 180
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG-HAAVKLFVRMKR--------- 132
+ A ++F PV RD +++ ++ Y+ DG A+ LF M+R
Sbjct: 181 QRDMIGDAMEIFEKMPV--RDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEF 238
Query: 133 ---------------------------DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
DGF D S S+ L +++ ++++
Sbjct: 239 TLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDN-SVSSALAEFYCVSDAVDDAKRVYES 297
Query: 166 VVKWGVMC---VPSVLNTLLS---------CYICCASSTLVESPVLMAS---------AR 204
+V G C S++ L+S + TL+ + +++ ++
Sbjct: 298 MV--GEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSK 355
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISGYVRHGL 263
KLF++ +S K S TMI Y +N +L A KL D V WN+M+SGY+ +G
Sbjct: 356 KLFEK--MSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGE 413
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+ EA + M ++ T++ L A F G+ LHA++ +T Q + +
Sbjct: 414 HSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVY---- 469
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER- 382
V AL+ FY+KCG L A+ F + ++ +W A+++GY EA FR + ++
Sbjct: 470 VGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQG 529
Query: 383 ---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N T+ ++S + +G +E LK F+ M+
Sbjct: 530 VVPNAATFVAVLSACSHAGLVDEGLKFFHSMQ 561
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
IA + + L AR + D M +WN MISGY + G Y EA MHS ++ +E
Sbjct: 44 IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNE 103
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
++++ +SA G G+Q+H+ + ++ Q V +AL+ +Y +C + +A
Sbjct: 104 VSFSACLSACTRGGSLFLGKQIHSLLFKSGYQR----FGPVGSALLHYYVQCCGIREAEM 159
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG-EE 402
VF+++ + V W+ +L+GY+ + +A IF ++P R+++ WT +ISG A+ G E
Sbjct: 160 VFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCER 219
Query: 403 SLKLFNQMK 411
+L LF M+
Sbjct: 220 ALDLFGCMR 228
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 53/344 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRL-IDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
++ R A ++ G R LI N L I Y S + LF+K + S T+++
Sbjct: 316 SMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITV 375
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
YS G + A KLF+ T R+ +++N+M+ Y HN + A+KL+V M+R
Sbjct: 376 YSKNGELDEAVKLFDKTKGE-RNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRS 434
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+FS + A + + + Q LH + L ++P
Sbjct: 435 TFSVLFRACAYLCSFQ-QGQLLH---------------------------AHLAKTPY-- 464
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
Q++ T ++ Y + LA A++ + P AW A+I+GY
Sbjct: 465 -------------QENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 511
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAYVLRTVVQPS-E 318
HG EA FR M G+ + T+ +++SA + GL + G + H+ + + P+ E
Sbjct: 512 HGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIE 571
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
H+ ++ + G++ +A E +MP++ D V W A+L+
Sbjct: 572 HY-----TCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLN 610
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 162/378 (42%), Gaps = 54/378 (14%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P + S ++ ++ G + A +F+ P LR S+N M+ YS A+ L
Sbjct: 35 PHVISTNISIAHHAKTGKLVEARHMFDEMP--LRTVSSWNTMISGYSQWGKYTEALTLVS 92
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI-C 187
M + SFS L A + + +Q+H + K G V + LL Y+ C
Sbjct: 93 FMHSSCVKFNEVSFSACLSACTR-GGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQC 151
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + A +F+E L ++ W+ M+AGYV+ D + A ++ + M
Sbjct: 152 CG----------IREAEMVFEE--LRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRD 199
Query: 248 AVAWNAMISGYV-RHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
VAW +ISGY R E A D F M S + +E+T ++ + G+ +
Sbjct: 200 VVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVV 259
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM----------------- 348
H ++ F SV++AL FY + A+ V++ M
Sbjct: 260 HGLCIKDGFD----FDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLV 315
Query: 349 -------------PVRD--LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 393
+RD L+S N ++ GY + + +++K +F ++ ++L + MI+
Sbjct: 316 SMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITV 375
Query: 394 LAESGFGEESLKLFNQMK 411
+++G +E++KLF++ K
Sbjct: 376 YSKNGELDEAVKLFDKTK 393
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA-- 372
QP ++S N + I + K GKLV+AR +FD+MP+R + SWN ++SGY + EA
Sbjct: 31 QPYPPHVISTNIS-IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALT 89
Query: 373 --KFIFREVPERNLLTWTVMISGLAESG 398
F+ + N ++++ +S G
Sbjct: 90 LVSFMHSSCVKFNEVSFSACLSACTRGG 117
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS-HNLDGHAAVKLFV 128
D+ LL+ Y+ ++ +K+F P D +S+N+ + A + + A+K F+
Sbjct: 474 DVSVSNALLTLYAETDSINECQKVFFQMPEY--DQVSWNSFIGALAKYEASVLQALKYFL 531
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M + G+ P+ +F +L A+S + Q+H ++K+ V ++ N LL+ Y C
Sbjct: 532 EMMQAGWRPNRVTFINILAAVSSFSVLGLG-HQIHALILKYSVADDNAIENALLAFYGKC 590
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
M +F ++DE
Sbjct: 591 EQ---------MEDCEIIFSRMS-ERRDE------------------------------- 609
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V+WN+MISGY+ G+ +A D M G ++D +T+ +++SA + G ++HA
Sbjct: 610 VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHAC 669
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+R ++ + V +AL+ Y KCGK+ A F+ MPVR++ SWN+++SGY
Sbjct: 670 AVRACLESD----VVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGH 725
Query: 369 LEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++A IF + + + +T+ ++S + G +E K F M
Sbjct: 726 GQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSM 771
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 71/332 (21%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
L++ Y + A +F P +DT+S+N+M+ HN AV F MKR+G
Sbjct: 378 NALVNMYGKCTAIDNACSVFQLMPS--KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNG 435
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHC--QQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
P FS + L + S + W +Q+H + KWG+ SV N LL+ Y
Sbjct: 436 MVPSNFSVISTLSSCSSLG---WLTLGRQIHGEGFKWGLDLDVSVSNALLTLY------- 485
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
D + +K+ M V+WN
Sbjct: 486 -----------------------------------AETDSINECQKVFFQMPEYDQVSWN 510
Query: 253 AMISGYVRHGLYE----EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+ I + YE +A F +M G + + T+ ++++A + + G Q+HA
Sbjct: 511 SFIGALAK---YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHAL 567
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINAR 367
+L+ V ++ NAL+ FY KC ++ +F +M RD VSWN+++SGY+++
Sbjct: 568 ILKYSVADDN----AIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSG 623
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
L +A L W +M G GF
Sbjct: 624 ILHKAMD----------LVWPMMQRGQKLDGF 645
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 159/360 (44%), Gaps = 55/360 (15%)
Query: 48 DIYCKSSNIPYAHHL----FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
D Y SS++ A+HL + D+F TL++ Y GN+ A KLF+ P ++
Sbjct: 31 DRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMP--QKN 88
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+S++ ++ Y+ N A LF + G P+ F+ + L A CQQ
Sbjct: 89 LVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRA----------CQQCG 138
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+K G+ + C + C S ++ S VLM+ ++ + S D
Sbjct: 139 STGIKLGMQIHAFI------CKLPCVSDMIL-SNVLMS----MYSDCSGSIDD------- 180
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD- 282
A ++ D + +V WN++IS Y R G AF F M G++++
Sbjct: 181 ------------AHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNL 228
Query: 283 ---EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
EYT SL++A+ L +CG L +L + + L V +AL+ + + G +
Sbjct: 229 RPNEYTLCSLVTAA--CSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMD 286
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP---ERNLLTWTVMISGLAE 396
A+ +F +M R+ V+ N ++ G + EEA +F+E+ E N + V++S E
Sbjct: 287 CAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTE 346
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 152/349 (43%), Gaps = 62/349 (17%)
Query: 51 CKSSNIPYA---HHLFDKTPN-PDIFSRTTLLSAYS-AAGNVKLAEKLFNATPVTLRDTI 105
C S+ I H K P D+ L+S YS +G++ A ++F+ + R+++
Sbjct: 137 CGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFD--EIKFRNSV 194
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDG----FAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
++N+++ Y D +A KLF M+ +G P+ ++ +++ A
Sbjct: 195 TWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAA------------ 242
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
C + G++ + +L T +E + +D +
Sbjct: 243 --CSLADCGLVLLEQML-------------TRIEKSGFL--------------RDLYVGS 273
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
++ G+ R + A+ + M AV N ++ G R EEA F++M + +++
Sbjct: 274 ALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEI 332
Query: 282 DEYTYTSLIS-----ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
+ + L+S ++ G G+++HAY+ R+ + + +S+ NAL+ Y KC
Sbjct: 333 NSESLVVLLSTFTEFSNLKEGKRK-GQEVHAYLFRSGLVDAR---ISIGNALVNMYGKCT 388
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
+ A VF MP +D VSWN+++SG + R EEA F + ++
Sbjct: 389 AIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 437
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 126/296 (42%), Gaps = 53/296 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ + L++ ++ G + A+ +F + R+ ++ N ++ + G A K+F
Sbjct: 268 DLYVGSALVNGFARYGLMDCAKMIFK--QMYDRNAVTMNGLMVGLARQHQGEEAAKVFKE 325
Query: 130 MKRDGFAPDPFSFSTVLGAM---SLIAEEEWHCQQLHCDVVKWGVMCVP-SVLNTLLSCY 185
MK D + S +L S + E + Q++H + + G++ S+ N L++ Y
Sbjct: 326 MK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMY 384
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C + + +A +F P KD
Sbjct: 385 GKCTA---------IDNACSVFQLMP--SKD----------------------------- 404
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
V+WN+MISG + +EEA F M G+ ++ S +S+ + G GRQ+
Sbjct: 405 --TVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQI 462
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
H + + +SV+NAL+T Y + + + ++VF +MP D VSWN+ +
Sbjct: 463 HGEGFKWGLDLD----VSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 514
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 29/353 (8%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T+L++AYS G + + K+F V ++ ++YNA + N +F
Sbjct: 170 DVYVSTSLVTAYSKCGVLVSSNKVFENLRV--KNVVTYNAFMSGLLQNGFHRVVFDVFKD 227
Query: 130 MKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M + P+ + +V+ A + ++ +Q+H +K V+ +L+ Y C
Sbjct: 228 MTMNLEEKPNKVTLVSVVSACATLSNIRLG-KQVHGLSMKLEACDHVMVVTSLVDMYSKC 286
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH--- 245
SA +F + +++ +W +MIAG + N + A +L + M
Sbjct: 287 GC---------WGSAFDVFSRS--EKRNLITWNSMIAGMMMNSESERAVELFERMVDEGI 335
Query: 246 -PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
P + WN++ISG+ + G+ EAF F KM G+ TSL+S ++ + +
Sbjct: 336 LPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKA 395
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILSG 362
+H Y LR V + AL+ Y KCG + AR VFD+ V+ D WNA++ G
Sbjct: 396 IHGYALRICVDKDDFLA----TALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGG 451
Query: 363 YINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y E A +F E+ + N T+ ++S + SG E L+ F ++
Sbjct: 452 YGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMIR 504
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 148/318 (46%), Gaps = 27/318 (8%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T+L+ YS G A +F+ + R+ I++N+M+ N + AV+LF RM +G
Sbjct: 277 TSLVDMYSKCGCWGSAFDVFSRSEK--RNLITWNSMIAGMMMNSESERAVELFERMVDEG 334
Query: 135 FAPDPFSFSTVLGAMS---LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
PD ++++++ + + E + ++ C GV +L +LLS +C S
Sbjct: 335 ILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCA----GVAPCLKILTSLLS--VCGDSC 388
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM-THPIAVA 250
L + + A ++ KD+ T ++ Y++ ++ AR + D P A
Sbjct: 389 VLRSAKAIHGYALRI-----CVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPA 443
Query: 251 -WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNAMI GY +G YE AF+ F +M +Q + T+ S++SA ++G G + +
Sbjct: 444 FWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMI 503
Query: 310 LRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG---YIN 365
+ + P EHF ++ + G+L +AR++ ++ ++++L Y++
Sbjct: 504 RKYGLDPKPEHF-----GCVVDLLGRAGQLGEARDLVQELAEPPASVFDSLLGACRCYLD 558
Query: 366 ARRLEEAKFIFREVPERN 383
+ EE ++ +N
Sbjct: 559 SNLGEEMAMKLIDIEPKN 576
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 221 TTMIAGYVRND-DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
T +IA Y N A +L D M P A+NA++SG R+G +A FR++ I
Sbjct: 74 TALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNI 133
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ + T SL+SA + +Q+H + V+ + + V+ +L+T Y+KCG LV
Sbjct: 134 RPNSVTIVSLLSARDVKNQSHV-QQVHCLACKLGVE----YDVYVSTSLVTAYSKCGVLV 188
Query: 340 QAREVFDKMPVRDLVSWNAILSGYIN 365
+ +VF+ + V+++V++NA +SG +
Sbjct: 189 SSNKVFENLRVKNVVTYNAFMSGLLQ 214
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
++ V +GLY+EA + + +HS + +T+ L+ A N + + LHA++ +T
Sbjct: 7 VTKLVANGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGF 66
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQ-AREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
H + ALI Y + A E+FD+MP + ++NA+LSG +A
Sbjct: 67 HSHPH----TSTALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAV 122
Query: 374 FIFREVPERNLLTWTVMISGL 394
++FR++ N+ +V I L
Sbjct: 123 WLFRQIGFWNIRPNSVTIVSL 143
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 177/416 (42%), Gaps = 48/416 (11%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
T +H + F + + LI +Y + I AH +FD+ N DIF+ T+++
Sbjct: 46 GTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMI 105
Query: 79 SAYSAAG--------NVKLAEKLFNATP--VTLRDTISYNAMVKAYSHNLDGHA-AVKLF 127
+AY +G N + P VTL + A ++A H AV+
Sbjct: 106 TAYGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRRE 165
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAE-------------EEWHC---------QQLHCD 165
+ + D F G + L A W+ Q L
Sbjct: 166 IGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAF 225
Query: 166 VVKWGVMC---VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
+ +MC +P +L TL + CC + + + + + D + T
Sbjct: 226 ELFRRMMCRNVLPDLL-TLANAIFCCVELNYLRRGMSIHG----YMITMGVELDLVASTA 280
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
++ Y + D+ ARKL + + + AV +N M++GY+ +GL EA + FR+M +
Sbjct: 281 LVDLYCK-IDITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTN 339
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI-LSVNNALITFYTKCGKLVQA 341
+ +LISA R +H YVLR + H + + N +I Y K G +V A
Sbjct: 340 VALFLNLISALSKLRDIRLVRSIHGYVLRHM-----HITHVEIANQIIHAYAKFGYVVDA 394
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
REVF++M RDLVSW +++ GY+ +++A +FR + +L +V + GL ++
Sbjct: 395 REVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQA 450
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I Y + + AR++ + M V+W +MI GYV HG ++A FR + + +D
Sbjct: 381 IIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSID 440
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
T L+ A G + +++H + R LSVNN+LIT Y KCGKL AR
Sbjct: 441 SVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKD----LSVNNSLITTYAKCGKLCTAR 496
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESG 398
+F +M R L SWNA++ Y E +F + + +T+T +++ + SG
Sbjct: 497 YIFQQMTERCLTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSG 556
Query: 399 FGEESLKLFNQM 410
EE L++F M
Sbjct: 557 LVEEGLQIFGIM 568
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
++ AY+ G V A ++FN + RD +S+ +M+K Y ++ A+ LF ++R+ +
Sbjct: 381 IIHAYAKFGYVVDAREVFN--RMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLS 438
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
D + +L A+S + + +++HC
Sbjct: 439 IDSVTLIGLLQALSQLGCLSF-IKEVHC-------------------------------- 465
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
F KD ++I Y + L +AR + MT +WNAMI
Sbjct: 466 ----------FSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIG 515
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQ 315
Y HG Y E + F M + + DE T+TS+++A ++GL G Q+ +++ +
Sbjct: 516 AYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIV 575
Query: 316 PSE-HFILSVNNALITFYTKCGKLVQAREVFDKMP 349
P+E H+ + ++ ++ G+L +A + MP
Sbjct: 576 PNEVHY-----SCIVDLLSRAGRLREAYNLVKSMP 605
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y ++ + AR + + + V+ A+ISGY + GL EEA + FR++ G++ + TY
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
T +++A + G+Q+H +VLR+ + PS F++ + N+LI Y+KCG L +R +FD
Sbjct: 62 TGVLTALSGLAALDLGKQVHNHVLRSEI-PS--FVV-LQNSLIDMYSKCGNLTYSRRIFD 117
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLAESGFGE 401
M R ++SWNA+L GY E +F + E + +T ++SG + G +
Sbjct: 118 TMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLED 177
Query: 402 ESLKLFNQM 410
+ L +FN M
Sbjct: 178 KGLNIFNDM 186
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y+ G + A +F P RD +S A++ Y+ A++LF R++ +G +
Sbjct: 2 YAKDGKIHEARTVFECLPE--RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYV 59
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+++ VL A+S +A + +Q+H V++ + + N+L+ Y C + T
Sbjct: 60 TYTGVLTALSGLAALDLG-KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTY------- 111
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM-----THPIAVAWNAMI 255
+R++FD + ++ SW M+ GY ++ + KL M P +V A++
Sbjct: 112 --SRRIFD--TMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVL 167
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMD 282
SG GL ++ + F M S I+++
Sbjct: 168 SGCSHGGLEDKGLNIFNDMSSGKIEVE 194
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 98/364 (26%)
Query: 28 HAHILTT----GFRLTPLIRNRLIDIYCKSSNIP----YAHHLFDKTPNPDIFSRTTLLS 79
HA ILTT ++ PL ++LID +C S+ YA+ LF + +P+++
Sbjct: 24 HALILTTPTTINTKIIPL--SKLID-FCVDSHFDEYFNYANLLFRQIHSPNVYI------ 74
Query: 80 AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
+N+M+K Y+ + + ++ L+ +M ++G++PD
Sbjct: 75 ---------------------------FNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDH 107
Query: 140 FSFSTVLGAMSLIAEE-EWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
F+F VL A S I ++ C +H ++K G V LL+ Y+ C +
Sbjct: 108 FTFPFVLKACSFIYDQVSGKC--VHSCILKSGFEANVYVATGLLNMYVECKN-------- 157
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
M S K+FD+ P W VAW +I+GY
Sbjct: 158 -MESGLKVFDKIP-------KWNV--------------------------VAWTCLINGY 183
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
V + EA + F++M G++ +E T + + A + GR +H V + P
Sbjct: 184 VINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDP-- 241
Query: 319 HFILSVNN------ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
F+ + N+ A++ Y KCG L ARE+F+KMP R++V+WN +++ Y R EA
Sbjct: 242 -FVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEA 300
Query: 373 KFIF 376
+F
Sbjct: 301 LGLF 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 48/347 (13%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+++ T LL+ Y N++ K+F+ P + +++ ++ Y N A+++F
Sbjct: 141 NVYVATGLLNMYVECKNMESGLKVFDKIPKW--NVVAWTCLINGYVINDQPREALEVFKE 198
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R G + + L A + C+ + D +W + +C A
Sbjct: 199 MGRWGVEANEVTMVNALIACA-------RCRDV--DTGRW------------VHERVCKA 237
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
P + AS + T ++ Y + L AR+L + M V
Sbjct: 238 GY----DPFVFASNSNVILA-----------TAIVEMYAKCGWLNVARELFNKMPERNIV 282
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AWN MI+ Y ++ Y EA F M + G D+ T+ S++S + G +HAY+
Sbjct: 283 AWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYL 342
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK-MPVRDLVSWNAILSGYINARR 368
L++ + +++ AL+ Y K G+L A+++F+ + +D+V W ++++
Sbjct: 343 LKSNMAKD----IALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGH 398
Query: 369 LEEAKFIFREVPERNLL-----TWTVMISGLAESGFGEESLKLFNQM 410
EA +F+ + E + L T+ ++ + G EE+ K FN M
Sbjct: 399 GNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLM 445
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 60/317 (18%)
Query: 51 CKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAM 110
CK+ P+ N ++ T ++ Y+ G + +A +LFN P R+ +++N M
Sbjct: 235 CKAGYDPFVF-----ASNSNVILATAIVEMYAKCGWLNVARELFNKMPE--RNIVAWNCM 287
Query: 111 VKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWG 170
+ AY+ + A+ LF M +GF PD +F +VL S+ A
Sbjct: 288 INAYNQYERYNEALGLFFYMLANGFCPDKATFLSVL---SVCARR--------------- 329
Query: 171 VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRN 230
CV ++ T+ + L++S + KD T ++ Y +N
Sbjct: 330 --CVLALGETV--------HAYLLKSNM---------------AKDIALATALLDMYAKN 364
Query: 231 DDLASARKLLDG-MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQMDEYTYTS 288
+L SA+K+ + + V W +MI+ HG EA F+ M + D TY
Sbjct: 365 GELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIG 424
Query: 289 LISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
++ A + GL ++ + ++ ++ EH+ + ++ ++ G +A ++ +
Sbjct: 425 VLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHY-----SCMVDLLSRAGHFREAEKLME 479
Query: 347 KMPVR-DLVSWNAILSG 362
M +R ++ W A+L+G
Sbjct: 480 TMSIRPNIAIWGALLNG 496
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A L + P +N+MI GY + + +++M G D +T+ ++ A
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSF 119
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+ +H+ +L++ + + + V L+ Y +C + +VFDK+P ++V+
Sbjct: 120 IYDQVSGKCVHSCILKSGFEANVY----VATGLLNMYVECKNMESGLKVFDKIPKWNVVA 175
Query: 356 WNAILSGYINARRLEEAKFIFREV 379
W +++GY+ + EA +F+E+
Sbjct: 176 WTCLINGYVINDQPREALEVFKEM 199
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 167/421 (39%), Gaps = 112/421 (26%)
Query: 23 LARAIHAHILTTG-FRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ IH++ + +G F + LI Y K +AH+LF + P P++
Sbjct: 23 FGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNV---------- 72
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+S+N ++ Y H A+ LF +++R D FS
Sbjct: 73 -----------------------VSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFS 109
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F++ + A + ++ + +H VK G+ V N L+ Y C S VE V
Sbjct: 110 FTSAMVACAQLSLLKLG-SSIHSKTVKLGMDNNTVVANCLIDMYGKCGS---VERAV--- 162
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA----------- 250
++F + ++ KD SW ++IA N ++ K L M +P V+
Sbjct: 163 ---RIFSD--IADKDVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQA 217
Query: 251 --------------------WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
WN++I+G+V EA + F KMH +Q+DE+T++ ++
Sbjct: 218 GKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIIL 277
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
+ + G +H ++ + S + V ++LI Y+KCG++
Sbjct: 278 NGIASLSALTWGMLIHCCTIKYGLDSS----IVVGSSLIDMYSKCGQV------------ 321
Query: 351 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+A+ IF + RNL++W MI G A +G +++ LF +
Sbjct: 322 -------------------NDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELL 362
Query: 411 K 411
K
Sbjct: 363 K 363
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ I ++L+ YS G V AE +FN ++ R+ +S+NAM+ Y+ N D A+ LF
Sbjct: 302 DSSIVVGSSLIDMYSKCGQVNDAESIFNV--LSNRNLVSWNAMIYGYARNGDSAQAISLF 359
Query: 128 --VRMKRDGFAPDPFSFSTVLGAMSLIAEE-EWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
++M+RD PD +F V+ A S E Q + ++G+ PS+ +
Sbjct: 360 ELLKMERDT-KPDGITFLNVISACSHSQIPFEMGIQYFDAMINEYGI--APSIKH----- 411
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
CC+ L+ ++ A+K+ E + W +++A +DL A
Sbjct: 412 --CCSMIRLMGQKGELSRAQKMIHELGF-ESCGVVWRSLLAACGTQEDLHVAE 461
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 145/336 (43%), Gaps = 80/336 (23%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L+S YS G+V A LF + D I+YNAM+ ++ N +VKLF +
Sbjct: 248 TGLISLYSKCGDVNTARLLFRR--INRPDLIAYNAMISGFTANGGTECSVKLFRELL--- 302
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
F+ + S ST++G + L H H L+ S + C S ++
Sbjct: 303 FSGERVSSSTIVGLIPL------HSPFGH--------------LHLACSIHGFCVKSGII 342
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+P + T A Y + +++ AR L D VAWNAM
Sbjct: 343 LNPTVS--------------------TAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAM 382
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
ISGY ++G E A F++M + T T+++SA G + G+ +H + +
Sbjct: 383 ISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENL 442
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+P+ + V+ AL+ Y KCG + +A ++FD M ++ V+WN ++ GY
Sbjct: 443 EPN----IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGY----------- 487
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
GL G+G E+LKL+N+M
Sbjct: 488 ------------------GL--HGYGHEALKLYNEM 503
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 147/373 (39%), Gaps = 85/373 (22%)
Query: 8 NLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
N + +N S LA+ HA + G+R +L S +A LF P
Sbjct: 13 NTLFSLINKASTFPHLAQT-HAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVP 71
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
PDIF +N +V+ +S N +++ L+
Sbjct: 72 KPDIFL---------------------------------FNVLVRGFSLNDSPSSSISLY 98
Query: 128 VRMKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
++R+ +PD F+++ + A S + H LH + G
Sbjct: 99 THLRRNTNLSPDNFTYAFAVAACS----NDKHLMLLHAHSIIDGY--------------- 139
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
S V + SA ++ Y + + ARK+ DGM
Sbjct: 140 --------GSNVFVGSA-------------------LVDLYCKFSRVVYARKVFDGMPER 172
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V WN MI+G V++ ++++ FR+M + G+++D T T+++ A+ G +
Sbjct: 173 DTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQ 232
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
L+ F V LI+ Y+KCG + AR +F ++ DL+++NA++SG+
Sbjct: 233 CLALKIGFG----FCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTAN 288
Query: 367 RRLEEAKFIFREV 379
E + +FRE+
Sbjct: 289 GGTECSVKLFREL 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 56/287 (19%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
NP + T + Y+ + LA LF+ +P + +++NAM+ Y+ N A+ LF
Sbjct: 344 NPTV--STAFTAIYNKLNEIDLARHLFDESPE--KTVVAWNAMISGYTQNGSTETAISLF 399
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVLNTLLSCYI 186
M + F P+ + +T+L A C QL KW + S N + Y+
Sbjct: 400 KEMMKTEFTPNAVTITTILSA----------CAQLGSLSFGKWVHHLIKSE-NLEPNIYV 448
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
A + ++ A +LFD +S+K+ +W TMI GY G+
Sbjct: 449 STALVDMYAKCGNISEAWQLFDS--MSEKNTVTWNTMIFGY--------------GL--- 489
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL- 305
HG EA + +M +G T+ S++ A + GL G ++
Sbjct: 490 --------------HGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 306 HAYVLRTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
H V + ++P EH+ ++ + G+L +A E KMPV
Sbjct: 536 HNMVNKYRIEPLIEHYA-----CMVDILGRSGQLEKALEFIKKMPVE 577
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 58 YAHHLFDKTPN--PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
+ HHL K+ N P+I+ T L+ Y+ GN+ A +LF++ ++ ++T+++N M+ Y
Sbjct: 432 WVHHLI-KSENLEPNIYVSTALVDMYAKCGNISEAWQLFDS--MSEKNTVTWNTMIFGYG 488
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS---LIAEEE 156
+ GH A+KL+ M G+ P +F +VL A S L+ E E
Sbjct: 489 LHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGE 532
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 56/293 (19%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RD 133
++LL YS G + A LF+ ++ IS+N+M+ YS + D A +L +M+ D
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTNE---KNVISWNSMIGGYSKDRDFRGAFELLRKMQMED 394
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWH---CQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+ + VL + EEE +++H ++ G +
Sbjct: 395 KVKVNEVTLLNVLP----VCEEEIQFLKLKEIHGYALRHGFI------------------ 432
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
Q DE +AGY + L A + GM + +
Sbjct: 433 -----------------------QSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSS 469
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNA+I G+V++G +A D + M G++ D +T SL+SA +CG+++H +L
Sbjct: 470 WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSML 529
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
R + E +S L++ Y +CGK++ A+ FD M ++LV WN +++G+
Sbjct: 530 RNGFELDEFICIS----LVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGF 578
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 148/346 (42%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D ++ Y+ G++ AE +F + S+NA++ + N A+ L++
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKM--VSSWNALIGGHVQNGFPRKALDLYLL 492
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD F+ +++L A C +L + C + ++L
Sbjct: 493 MRGSGLEPDLFTIASLLSA----------CARLK------SLSCGKEIHGSML------- 529
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
R F + DE ++++ YV+ + A+ D M V
Sbjct: 530 --------------RNGF------ELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLV 569
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WN MI+G+ ++ +A D F +M S I DE + + A G++LH +
Sbjct: 570 CWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFA 629
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+++ +EH ++ +LI Y KCG + Q++ +FD++ ++ V+WN +++GY
Sbjct: 630 VKS--HLTEHSFVTC--SLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHG 685
Query: 370 EEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+A +F+ + +T+ +++ +G E L+ QM+
Sbjct: 686 RKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNA++SGY+R+ L+ +A F +M S+ D +T +I A G +H +
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFA 222
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+T V + V NALI Y K G + A +VFDKMP R+LVSWN+++ +
Sbjct: 223 LKTKVLSD----VFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 370 EEAKFIFR 377
EE+ +F+
Sbjct: 279 EESYGLFK 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 135/325 (41%), Gaps = 55/325 (16%)
Query: 60 HHLFDKTPN--PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
H+ +P+ D+ T L++ YS + + +FNA+ ++ +NA++ Y N
Sbjct: 116 HNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS--RRKNLFLWNALLSGYLRN 173
Query: 118 LDGHAAVKLFVRM-KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS 176
AV +FV M F PD F+ V+ A CV
Sbjct: 174 SLFRDAVFVFVEMISLTEFVPDNFTLPCVIKA------------------------CVGV 209
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
L A T V S V + +A +IA Y + + SA
Sbjct: 210 YDVRLGEAVHGFALKTKVLSDVFVGNA-------------------LIAMYGKFGFVESA 250
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSLISASF 294
K+ D M V+WN+++ + +G++EE++ F+ + G+ D T ++I
Sbjct: 251 VKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCA 310
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
G G H L+ + L VN++L+ Y+KCG L +AR +FD ++++
Sbjct: 311 RQGEVRLGMVFHGLALKLGLCGE----LKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVI 365
Query: 355 SWNAILSGYINARRLEEAKFIFREV 379
SWN+++ GY R A + R++
Sbjct: 366 SWNSMIGGYSKDRDFRGAFELLRKM 390
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 52/298 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L++ Y G V+ A K+F+ P R+ +S+N+++ A N + LF
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQ--RNLVSWNSVMYACLENGVFEESYGLFKG 287
Query: 130 M--KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+ +G PD + TV+ + E H +K G+ V ++LL Y
Sbjct: 288 LLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGELKVNSSLLDMYSK 346
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + AR LFD ++K+
Sbjct: 347 CG---------YLCEARVLFDT---NEKN------------------------------- 363
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
++WN+MI GY + + AF+ RKM ++++E T +++ F +++H
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
Y LR S+ V NA + Y KCG L A VF M + + SWNA++ G++
Sbjct: 424 GYALRHGFIQSDEL---VANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHV 478
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F +L+S Y G + LA+ F+ + ++ + +N M+ +S N A+ +F +
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDN--MEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M PD S LGA S ++ ++LHC VK + V +L+ Y C
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLG-KELHCFAVKSHLTEHSFVTCSLIDMYAKCG 652
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
M ++ +FD L K E +W
Sbjct: 653 C---------MEQSQNIFDRVHL--KGEVTW----------------------------- 672
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
N +I+GY HG +A + F+ M + G + D T+ +L++A + GL G + +
Sbjct: 673 --NVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQM 730
Query: 310 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINA 366
++P EH+ ++ + G+L +A E+ +++P + D W+++LS N
Sbjct: 731 QSLFGIKPKLEHYA-----CVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNY 785
Query: 367 RRLE 370
R L+
Sbjct: 786 RDLD 789
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 161/347 (46%), Gaps = 55/347 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DIF +L+ Y+ +G+ ++A +FN + R+ +S+N+MV ++ N AAV+L +
Sbjct: 372 DIFIGNSLIDMYAKSGSSRVASTIFN--KMGDRNIVSWNSMVANFAQNRHHFAAVELLRQ 429
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G P+ +F+ VL A + + +++H +++ G + N L Y C
Sbjct: 430 MQAHGENPNNVTFTNVLPACARLGFLNV-GKEIHARIIQTGCATDLFLSNALTDMYSKCG 488
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+L AR +F+ +S KD+ S+ +I GY + + +
Sbjct: 489 HLSL---------ARNVFN---VSIKDKVSYNILIIGYSQTTNSS--------------- 521
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
E+ + F +M G+ D ++ +ISA + G+++H ++
Sbjct: 522 ----------------ESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHL 565
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R + H L N+L+ YTKCG++ A +VFD++ +D+ SWN ++ GY
Sbjct: 566 VRKLF----HTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEF 621
Query: 370 EEAKFIFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
E A +F + E + +++ ++S + G E+ K F QM+
Sbjct: 622 ETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQ 668
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 20/272 (7%)
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV---LNTLLSCYICCASS 191
F D S++TV+G L ++ +H + L C K V+ P V L T++S CA S
Sbjct: 196 FERDKVSWNTVIG---LCSDRGFHEESL-C-FFKEMVVAAPVVRPDLVTVVSVLPVCADS 250
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
E+ V+ + LS + ++ Y + + +K+ D M V+W
Sbjct: 251 ---ENVVMARIVHGYVFKVGLSGHVKVG-NALVDVYGKCGSEEACKKVFDEMDERNEVSW 306
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
NA+I+G+ GL +A D FR M + G++ + T +S++ GLF G ++H Y LR
Sbjct: 307 NAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLR 366
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++ S+ FI N+LI Y K G A +F+KM R++VSWN++++ + R
Sbjct: 367 MGIE-SDIFI---GNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFA 422
Query: 372 AKFIFREVPER----NLLTWTVMISGLAESGF 399
A + R++ N +T+T ++ A GF
Sbjct: 423 AVELLRQMQAHGENPNNVTFTNVLPACARLGF 454
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L YS G++ LA +FN V+++D +SYN ++ YS + ++ LF
Sbjct: 473 DLFLSNALTDMYSKCGHLSLARNVFN---VSIKDKVSYNILIIGYSQTTNSSESLNLFSE 529
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD SF ++ A + ++ + +++H +V+ N+LL Y C
Sbjct: 530 MRLSGMTPDIVSFIGIISACAHLSSIK-QGKEIHGHLVRKLFHTHLFAANSLLDLYTKCG 588
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L A K+FD + KD SW TMI GY + +A L + M V
Sbjct: 589 RIDL---------ATKVFDR--IQHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGV 637
Query: 250 AWN-----AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
++ A++S GL E+ F++M I+ Y ++
Sbjct: 638 EYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHYACMV 683
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 54/275 (19%)
Query: 93 LFNATPVTLRDTISYNAMVKAYS--HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS 150
LF T + +N +++AYS DG ++ M R G PD ++ VL A S
Sbjct: 89 LFQNTLPFSKTAFLWNTLIRAYSIAGFFDGFG---VYNTMVRSGVKPDDHTYPFVLKACS 145
Query: 151 LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA 210
+ + +++H V K G V NTLL Y C A +FDE
Sbjct: 146 DYLKFD-KGREVHGVVFKVGFDKDVFVGNTLLMFYGNCG---------FFVDAMNVFDE- 194
Query: 211 PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
+ ++D+ SW T+I L S R G +EE+
Sbjct: 195 -MFERDKVSWNTVIG-------LCSDR------------------------GFHEESLCF 222
Query: 271 FRKMHSMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNAL 328
F++M ++ D T S++ ++ R +H YV + V S H + V NAL
Sbjct: 223 FKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFK--VGLSGH--VKVGNAL 278
Query: 329 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+ Y KCG ++VFD+M R+ VSWNA+++G+
Sbjct: 279 VDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGF 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
A WN +I Y G ++ F + M G++ D++TY ++ A + F+ GR++H
Sbjct: 100 AFLWNTLIRAYSIAGFFD-GFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHG 158
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
V + + V N L+ FY CG V A VFD+M RD VSWN ++ G + R
Sbjct: 159 VVFKVGFDKD----VFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVI-GLCSDR 213
Query: 368 RLEEAKFIF 376
E F
Sbjct: 214 GFHEESLCF 222
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH H++ F N L+D+Y K I A +FD+ + D+ S T++ Y
Sbjct: 558 GKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGM 617
Query: 84 AGNVKLAEKLFNATPV---TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
G + A LF A D++SY A++ A SH K F +M+ P
Sbjct: 618 RGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEP 674
>Medtr4g087150.2 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 576
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
IA + + L AR + D M +WN MISGY + G Y EA MHS ++ +E
Sbjct: 44 IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNE 103
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
++++ +SA G G+Q+H+ + ++ Q V +AL+ +Y +C + +A
Sbjct: 104 VSFSACLSACTRGGSLFLGKQIHSLLFKSGYQR----FGPVGSALLHYYVQCCGIREAEM 159
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG-EE 402
VF+++ + V W+ +L+GY+ + +A IF ++P R+++ WT +ISG A+ G E
Sbjct: 160 VFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCER 219
Query: 403 SLKLFNQMK 411
+L LF M+
Sbjct: 220 ALDLFGCMR 228
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 181/422 (42%), Gaps = 70/422 (16%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH+ + +G++ + + L+ Y + I A +F++ + + + +L+ Y
Sbjct: 121 LGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYV 180
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG-HAAVKLFVRMK---------- 131
+ A ++F PV RD +++ ++ Y+ DG A+ LF M+
Sbjct: 181 QRDMIGDAMEIFEKMPV--RDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEF 238
Query: 132 --------------------------RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
+DGF D S S+ L +++ ++++
Sbjct: 239 TLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDN-SVSSALAEFYCVSDAVDDAKRVYES 297
Query: 166 VVKWGVMC---VPSVLNTLLS---------CYICCASSTLVESPVLMAS---------AR 204
+V G C S++ L+S + TL+ + +++ ++
Sbjct: 298 MV--GEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSK 355
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISGYVRHGL 263
KLF++ +S K S TMI Y +N +L A KL D V WN+M+SGY+ +G
Sbjct: 356 KLFEK--MSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGE 413
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+ EA + M ++ T++ L A F G+ LHA++ +T Q + +
Sbjct: 414 HSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVY---- 469
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V AL+ FY+KCG L A+ F + ++ +W A+++GY EA FR + +++
Sbjct: 470 VGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQD 529
Query: 384 LL 385
L
Sbjct: 530 KL 531
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 168/399 (42%), Gaps = 64/399 (16%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P + S ++ ++ G + A +F+ P LR S+N M+ YS A+ L
Sbjct: 35 PHVISTNISIAHHAKTGKLVEARHMFDEMP--LRTVSSWNTMISGYSQWGKYTEALTLVS 92
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI-C 187
M + SFS L A + + +Q+H + K G V + LL Y+ C
Sbjct: 93 FMHSSCVKFNEVSFSACLSACTR-GGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQC 151
Query: 188 CA--SSTLV------ESPVL-------------MASARKLFDEAPLSQKDEPSWTTMIAG 226
C + +V E+ VL + A ++F++ P+ +D +WTT+I+G
Sbjct: 152 CGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPV--RDVVAWTTLISG 209
Query: 227 YV-RNDDLASARKLLDGMTHPIAVAWNA---------------MISGYVRHGL-YEEAFD 269
Y R D A L M V N + G V HGL ++ FD
Sbjct: 210 YAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFD 269
Query: 270 -------TFRKMHSMGIQMDE--YTYTSLISA-------SFNTGLFNCGRQLHAYVLRTV 313
+ + + +D+ Y S++ S GL + GR A ++
Sbjct: 270 FDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYG 329
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
++ L NN +I Y G+ +++++F+KM ++ L S N +++ Y L+EA
Sbjct: 330 LRDK---TLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAV 386
Query: 374 FIFREVP-ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F + ERN +TW M+SG +G E+LKL+ M+
Sbjct: 387 KLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMR 425
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 45/254 (17%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRL-IDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
++ R A ++ G R LI N L I Y S + LF+K + S T+++
Sbjct: 316 SMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITV 375
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
YS G + A KLF+ T R+ +++N+M+ Y HN + A+KL+V M+R
Sbjct: 376 YSKNGELDEAVKLFDKTKGE-RNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRS 434
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+FS + A + + + Q LH + L ++P
Sbjct: 435 TFSVLFRACAYLCSFQ-QGQLLH---------------------------AHLAKTPY-- 464
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
Q++ T ++ Y + LA A++ + P AW A+I+GY
Sbjct: 465 -------------QENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 511
Query: 261 HGLYEEAFDTFRKM 274
HG EA FR M
Sbjct: 512 HGCGSEAISRFRSM 525
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA-- 372
QP ++S N + I + K GKLV+AR +FD+MP+R + SWN ++SGY + EA
Sbjct: 31 QPYPPHVISTNIS-IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALT 89
Query: 373 --KFIFREVPERNLLTWTVMISGLAESG 398
F+ + N ++++ +S G
Sbjct: 90 LVSFMHSSCVKFNEVSFSACLSACTRGG 117
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 176/384 (45%), Gaps = 74/384 (19%)
Query: 46 LIDIYCKSSNIPYAH-------HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATP 98
L+ I+ K+ +P H +F + D F +SA+ +G +K A K+F+ +P
Sbjct: 110 LLKIFSKNG-VPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESP 168
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
RD +++ A++ + N A++ FV M+ G D F+ ++VL A +L+ + +
Sbjct: 169 E--RDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGD---Y 223
Query: 159 C--QQLHCDVVKWG-VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK 215
C +++H V+ G V+ SV L+ Y C A K+FDE P +
Sbjct: 224 CFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCE---------DACKVFDEMPY--R 272
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
D +WT ++AG+V+ +K Y++A FR+M
Sbjct: 273 DVVAWTVVVAGFVQ------CKK-------------------------YQDALSFFRRML 301
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN----NALITF 331
+ +E+T TS++SA + G + GR +H Y+ EH ++N +L+
Sbjct: 302 LDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYM--------EHNDCNLNAVLGTSLVDM 353
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTW 387
Y KCG + +A VF+ + V+++ +W A+++G A IF + E L +T+
Sbjct: 354 YAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTF 413
Query: 388 TVMISGLAESGFGEESLKLFNQMK 411
++ + GF +E KLF M+
Sbjct: 414 LGVLGACSHGGFVDEGKKLFEMMR 437
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 54/279 (19%)
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSVLNTLLSCY 185
+ +M G PD +F +L S H ++ V K G V N +S +
Sbjct: 92 YAKMHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAF 151
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C M +A K+FDE+P ++D
Sbjct: 152 GCSG---------FMKNACKVFDESP--ERD----------------------------- 171
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
VAW A+I+G+V++G+ EA F +M G+ +D +T S++ A+ G + G+++
Sbjct: 172 --IVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRV 229
Query: 306 HAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
H + + T VV SV AL+ Y KCG A +VFD+MP RD+V+W +++G+
Sbjct: 230 HGFYVETGRVVLDG-----SVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGF 284
Query: 364 INARRLEEAKFIFREVPERNLL----TWTVMISGLAESG 398
+ ++ ++A FR + N++ T T ++S A G
Sbjct: 285 VQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVG 323
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 54/207 (26%)
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
KL APLSQ +S R LL+ + P +N +I+ + + L
Sbjct: 47 KLIQCAPLSQPQT----------------SSLRLLLNTIHTPNTRLFNKLITSFPKTTLL 90
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
++ KMH MG+Q D++T+ L+ G+ P++H V
Sbjct: 91 -----SYAKMHEMGVQPDKHTFPLLLKIFSKNGV-----------------PNDHLPFMV 128
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
Y + KL FD D N +S + + ++ A +F E PER++
Sbjct: 129 -------YAQVFKLG-----FD----HDCFVCNGFISAFGCSGFMKNACKVFDESPERDI 172
Query: 385 LTWTVMISGLAESGFGEESLKLFNQMK 411
+ WT +I+G ++G E+L+ F +M+
Sbjct: 173 VAWTALINGFVKNGVPGEALRCFVEMR 199
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 176/384 (45%), Gaps = 74/384 (19%)
Query: 46 LIDIYCKSSNIPYAH-------HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATP 98
L+ I+ K+ +P H +F + D F +SA+ +G +K A K+F+ +P
Sbjct: 110 LLKIFSKNG-VPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESP 168
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
RD +++ A++ + N A++ FV M+ G D F+ ++VL A +L+ + +
Sbjct: 169 E--RDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGD---Y 223
Query: 159 C--QQLHCDVVKWG-VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK 215
C +++H V+ G V+ SV L+ Y C A K+FDE P +
Sbjct: 224 CFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCE---------DACKVFDEMPY--R 272
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
D +WT ++AG+V+ +K Y++A FR+M
Sbjct: 273 DVVAWTVVVAGFVQ------CKK-------------------------YQDALSFFRRML 301
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN----NALITF 331
+ +E+T TS++SA + G + GR +H Y+ EH ++N +L+
Sbjct: 302 LDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYM--------EHNDCNLNAVLGTSLVDM 353
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTW 387
Y KCG + +A VF+ + V+++ +W A+++G A IF + E L +T+
Sbjct: 354 YAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTF 413
Query: 388 TVMISGLAESGFGEESLKLFNQMK 411
++ + GF +E KLF M+
Sbjct: 414 LGVLGACSHGGFVDEGKKLFEMMR 437
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 54/279 (19%)
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSVLNTLLSCY 185
+ +M G PD +F +L S H ++ V K G V N +S +
Sbjct: 92 YAKMHEMGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAF 151
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C M +A K+FDE+P ++D
Sbjct: 152 GCSG---------FMKNACKVFDESP--ERD----------------------------- 171
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
VAW A+I+G+V++G+ EA F +M G+ +D +T S++ A+ G + G+++
Sbjct: 172 --IVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRV 229
Query: 306 HAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
H + + T VV SV AL+ Y KCG A +VFD+MP RD+V+W +++G+
Sbjct: 230 HGFYVETGRVVLDG-----SVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGF 284
Query: 364 INARRLEEAKFIFREVPERNLL----TWTVMISGLAESG 398
+ ++ ++A FR + N++ T T ++S A G
Sbjct: 285 VQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVG 323
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 54/207 (26%)
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
KL APLSQ +S R LL+ + P +N +I+ + + L
Sbjct: 47 KLIQCAPLSQPQT----------------SSLRLLLNTIHTPNTRLFNKLITSFPKTTLL 90
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
++ KMH MG+Q D++T+ L+ G+ P++H V
Sbjct: 91 -----SYAKMHEMGVQPDKHTFPLLLKIFSKNGV-----------------PNDHLPFMV 128
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
Y + KL FD D N +S + + ++ A +F E PER++
Sbjct: 129 -------YAQVFKLG-----FD----HDCFVCNGFISAFGCSGFMKNACKVFDESPERDI 172
Query: 385 LTWTVMISGLAESGFGEESLKLFNQMK 411
+ WT +I+G ++G E+L+ F +M+
Sbjct: 173 VAWTALINGFVKNGVPGEALRCFVEMR 199
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 59/333 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T+L+ + G + A +F+ PV +D + +NAM+ S +L+ A+++F R
Sbjct: 133 DVYIGTSLIDMFCKMGCLDNARNVFDKMPV--KDGVCWNAMISGLSQSLNPCEALEMFWR 190
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ +GF D S + A+S + + C+ +H VV+ + V S N+L+ Y C
Sbjct: 191 MQMEGFEVDKVSILNLAPAVSRLGDVGC-CKSIHGYVVRRSICGVVS--NSLIDMYCKCG 247
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ SA+++FD VR+D V
Sbjct: 248 D---------VHSAQRVFDRMG----------------VRDD-----------------V 265
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+W M++GYV++G Y E KM ++M++ + + G++++ Y
Sbjct: 266 SWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYA 325
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+ + + V ++ Y KCG+L +ARE+F + RDLV+W+A LS +
Sbjct: 326 LQMGLMSD----IVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYP 381
Query: 370 EEAKFIFREV------PERNLLTWTVMISGLAE 396
E IF+ + P++ +L ++++SG E
Sbjct: 382 REVLSIFQVMQYEGLKPDKAIL--SILVSGCTE 412
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 55/263 (20%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLH 163
I YN+ +KAYS H A+ L+ + + G PD F+F+ VL A + + ++H ++
Sbjct: 65 ILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACT--SALDFHEGVNIY 122
Query: 164 CDVVKWGVMCVPSVLNTLLS--CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
D+V G+ C + +L+ C + C + +AR +FD+ P+
Sbjct: 123 KDIVFNGLECDVYIGTSLIDMFCKMGC-----------LDNARNVFDKMPVK-------- 163
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
DG+ WNAMISG + EA + F +M G ++
Sbjct: 164 -------------------DGV------CWNAMISGLSQSLNPCEALEMFWRMQMEGFEV 198
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
D+ + +L A G C + +H YV+R + V+N+LI Y KCG + A
Sbjct: 199 DKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG------VVSNSLIDMYCKCGDVHSA 252
Query: 342 REVFDKMPVRDLVSWNAILSGYI 364
+ VFD+M VRD VSW +++GY+
Sbjct: 253 QRVFDRMGVRDDVSWATMMAGYV 275
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 149/345 (43%), Gaps = 52/345 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI TTL+S Y A LFN + ++D + +N ++ ++ D H A+++F R
Sbjct: 434 DISMVTTLVSMYIRFELFTYAMTLFNR--MQIKDIVVWNTLINGFTKYGDPHLALEMFNR 491
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
++ G PD + + A +++ + + LH + K G V L+ Y C
Sbjct: 492 LQLSGILPDSGTMVGLFSACAIMDDLDLG-TCLHGGIEKSGFESDIHVKVALMDMYAKCG 550
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + S +LF ++ +V+++ V
Sbjct: 551 S---------LCSVERLF---------------LLTKHVKDE-----------------V 569
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN MI+GY+ +G EA TFR+M ++ + T+ +++ A + H +
Sbjct: 570 SWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCI 629
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R + N+LI Y KCG+L + + F +M +D +SWNA+LS Y +
Sbjct: 630 IRMGFLSCT----LIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQG 685
Query: 370 EEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
E A +F + E N+ +++ ++S SG +E +F M
Sbjct: 686 ELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASM 730
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 52/295 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI + L+ Y+ G++ E+LF T ++D +S+N M+ Y HN + A+ F R
Sbjct: 535 DIHVKVALMDMYAKCGSLCSVERLFLLTK-HVKDEVSWNVMIAGYLHNGYSNEAISTFRR 593
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK + P+ +F T+L A+S ++ H +++ G + + N+L+ Y C
Sbjct: 594 MKLENVRPNLVTFVTILPAVSYLSILR-EAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCG 652
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ + K F E + KD SW
Sbjct: 653 Q---------LRYSEKCFHE--MENKDTISW----------------------------- 672
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
NAM+S Y HG E A F M +++D +Y S++SA ++GL G + A +
Sbjct: 673 --NAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASM 730
Query: 310 L-RTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ V+PS EH+ ++ G + + +KM D W A+L+
Sbjct: 731 CEKHHVEPSMEHYA-----CMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLA 780
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+L+ Y G+V A+++F+ V RD +S+ M+ Y N ++L +M+R
Sbjct: 237 NSLIDMYCKCGDVHSAQRVFDRMGV--RDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGN 294
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ + L ++ + + E ++++ ++ G+M S +V
Sbjct: 295 VKMNKVAVVNALLVVAEMRDLE-KGKEIYNYALQMGLM-----------------SDIVV 336
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+P+ + Y + +L AR+L + VAW+A
Sbjct: 337 ATPI-------------------------VCMYAKCGELKKARELFLSLEGRDLVAWSAF 371
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
+S V G E F+ M G++ D+ + L+S G+ +H Y ++ +
Sbjct: 372 LSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADM 431
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+ +S+ L++ Y + A +F++M ++D+V WN +++G+
Sbjct: 432 ESD----ISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGF 476
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
+ +P + +N+ I Y + + +A + + + +G++ D++T+ ++ A + F+ G
Sbjct: 59 IKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEG 118
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
++ ++ ++ + + +LI + K G L AR VFDKMPV+D V WNA++SG
Sbjct: 119 VNIYKDIVFNGLECD----VYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISG 174
Query: 363 YINARRLEEAKFIF-------REVPERNLLTWTVMISGLAESG 398
+ EA +F EV + ++L +S L + G
Sbjct: 175 LSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVG 217
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
A A H I+ GF LI N LID+Y K + Y+ F + N D S +LSAY+
Sbjct: 622 AMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAM 681
Query: 84 AGNVKLAEKLFNATPVT-LR-DTISYNAMVKAYSHN 117
G +LA LF+ + +R D++SY +++ A H+
Sbjct: 682 HGQGELAVALFSVMQESNVRVDSVSYISVLSACRHS 717
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 49/326 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ L++ Y+ G++ A +F+ P +D IS+NAM+ N + + LF R
Sbjct: 234 DVDVINALITMYAKCGDIDTARLVFDKMPK--KDRISWNAMIAGCFENGECLEGLTLFCR 291
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M PD + ++V+ A LI +E +++H V++ PSV N+L+ Y +
Sbjct: 292 MIEYPVDPDLMTMTSVITACELIGDERLG-REIHGYVMRTKFSRDPSVYNSLIQMY---S 347
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S LVE A K+F + V
Sbjct: 348 SVGLVEE------AEKVFSQTECRD---------------------------------VV 368
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W AMISGY + ++++A +T++ M + GI DE T ++SA + G LH
Sbjct: 369 MWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKA 428
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+T + F + V N LI Y KC + +A EVF + ++++SW +I+ G R
Sbjct: 429 KKTGLI----FYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRC 484
Query: 370 EEAKFIFREVPERNLLTWTVMISGLA 395
+A F F+E+ R W ++ L+
Sbjct: 485 YDALFFFKEMMRRQKPNWVTLVCVLS 510
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 160/397 (40%), Gaps = 86/397 (21%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
+ L R IH +++ T F P + N LI +Y
Sbjct: 315 GDERLGREIHGYVMRTKFSRDPSVYNSLIQMY---------------------------- 346
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
S+ G V+ AEK+F+ T RD + + AM+ Y +NL A++ + M+ +G PD
Sbjct: 347 ---SSVGLVEEAEKVFSQTEC--RDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPD 401
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
+ VL A S + + + LH K G++ V N L+ Y C
Sbjct: 402 EITIGVVLSACSCLCDLD-TGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKC-------- 452
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
+ A ++F + K+ SWT++I G N+ A M W
Sbjct: 453 -IDKALEVFHS--IRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQKPNW------- 502
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
T ++SA G F CG+++HAY LRT V
Sbjct: 503 -------------------------VTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDG 537
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
+ + NA++ Y +CG++ A + F + +D+ +WN +L+GY + A +FR
Sbjct: 538 Y----MPNAVLDMYVRCGRMEYAWKQFFSID-QDVSTWNILLTGYAERGKGTLATELFRR 592
Query: 379 VPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ E N+ +T+ ++ + SG E L+ ++ MK
Sbjct: 593 MLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMK 629
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 129/295 (43%), Gaps = 57/295 (19%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
LLS + GN+ A +F P R+ S+N +V Y+ A+ L+ RM G
Sbjct: 138 NVLLSMFVKFGNLVDAWYVFGRMPE--RNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVG 195
Query: 135 FAPDPFSFSTVL----GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
PD ++F VL G L+ E +H V+++G V+N L++ Y C
Sbjct: 196 VRPDVYTFPCVLRTCGGVPDLVKGRE-----IHVHVLRFGFESDVDVINALITMYAKCGD 250
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ +AR +FD+ P +KD SW MIAG N + L+G+T
Sbjct: 251 ---------IDTARLVFDKMP--KKDRISWNAMIAGCFENGE------CLEGLT------ 287
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
F +M + D T TS+I+A G GR++H YV+
Sbjct: 288 -------------------LFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVM 328
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
RT SV N+LI Y+ G + +A +VF + RD+V W A++SGY N
Sbjct: 329 RTKFSRDP----SVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYEN 379
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 10/188 (5%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+++ +V+ +L A + M +WN ++ GY + G ++EA + + +M +G++
Sbjct: 138 NVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVR 197
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D YT+ ++ GR++H +VLR + + V NALIT Y KCG +
Sbjct: 198 PDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESD----VDVINALITMYAKCGDIDT 253
Query: 341 AREVFDKMPVRDLVSWNAILSG-YINARRLEEAKFIFR--EVP-ERNLLTWTVMISGLAE 396
AR VFDKMP +D +SWNA+++G + N LE R E P + +L+T T +I+ A
Sbjct: 254 ARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVIT--AC 311
Query: 397 SGFGEESL 404
G+E L
Sbjct: 312 ELIGDERL 319
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G + A MH + I ++E +Y +L+ G ++ +Y+ ++ + H
Sbjct: 76 GNLDSAMSYLESMHELKISVEEDSYIALVRLCEWKRARKEGSRVWSYITKSKMMT--HLS 133
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
+ + N L++ + K G LV A VF +MP R+L SWN ++ GY +EA
Sbjct: 134 VKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEA 184
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 56/318 (17%)
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
+ ++ +S+ ++ Y+H D +++F +M + PFSFS + A + I
Sbjct: 170 IGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLG 229
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP 218
+Q+H V+ G V+N +L Y C ++ A++LF E
Sbjct: 230 -KQVHAAVINHGFESNLPVMNAILDMYCRCRCAS---------EAKQLFGE--------- 270
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
MT + WN +I+G+ YE + F +M S G
Sbjct: 271 ------------------------MTQKDTITWNTLIAGFETLDSYE-SLCIFSQMVSEG 305
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
+ +T+TS+I+A N + CG+QLH ++ + + L ++NALI Y KCG +
Sbjct: 306 FSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNN----LELSNALIDMYAKCGNV 361
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV------PERNLLTWTVMIS 392
+ ++F M +LVSW +++ GY +EA +F E+ P++ + + ++S
Sbjct: 362 ADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDK--IVFMAVLS 419
Query: 393 GLAESGFGEESLKLFNQM 410
+ +G +E L+ F M
Sbjct: 420 ACSHAGLVDEGLRYFRLM 437
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 159/371 (42%), Gaps = 69/371 (18%)
Query: 33 TTGFRLTPL-IRNRLIDIYCKSSNIPYAHHLFDKTPNP-DIFSRTT-LLSAYSAAGNVKL 89
+T FR P ++N L C ++ P+ NP D+ TT L+ +Y G+ +
Sbjct: 12 STNFRPIPFSVQNSL---RCIQNDTPF---------NPKDLTGLTTDLIKSYFDKGSFEE 59
Query: 90 AEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM 149
A LF+ P RD I++ +M+ Y+ A +F M RDG P+ F+ S VL A
Sbjct: 60 AHTLFDEMP--HRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKAC 117
Query: 150 SLIAEEEWHCQQL-HCDVVKWGVMCVP-SVLNTLLSCYICCASSTLVESPVLMASARKLF 207
+ + C +L H +K G V N L+ Y C S M +AR +F
Sbjct: 118 KSL--KALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDS--------MDNARLVF 167
Query: 208 DEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEA 267
++ + K+ AV+W +I+GY
Sbjct: 168 ED--IGTKN-------------------------------AVSWTTLITGYTHRRDAFGG 194
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
FR+M ++ ++++ +SA + G N G+Q+HA V+ + + L V NA
Sbjct: 195 LRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESN----LPVMNA 250
Query: 328 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER---NL 384
++ Y +C +A+++F +M +D ++WN +++G+ E + V E N
Sbjct: 251 ILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSYESLCIFSQMVSEGFSPNC 310
Query: 385 LTWTVMISGLA 395
T+T +I+ A
Sbjct: 311 FTFTSVIAACA 321
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 9/203 (4%)
Query: 202 SARKLFDEAPLSQKDEPSWTT-MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
S R + ++ P + KD TT +I Y A L D M H +AW +MI+GY
Sbjct: 25 SLRCIQNDTPFNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTS 84
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+ A++ F M G++ + +T ++++ A + CG+ +H ++ Q S +
Sbjct: 85 CNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIY 144
Query: 321 ILSVNNALITFY-TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR----LEEAKFI 375
V+NAL+ Y T C + AR VF+ + ++ VSW +++GY + R L + +
Sbjct: 145 ---VDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQM 201
Query: 376 FREVPERNLLTWTVMISGLAESG 398
F E E + ++++ +S A G
Sbjct: 202 FMEEGELSPFSFSIAVSACASIG 224
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 89/348 (25%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
+ L + +HA ++ GF + N ++D+YC+ A LF +
Sbjct: 224 GSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGE------------- 270
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
+T +DTI++N ++ + LD + ++ +F +M +GF+P+
Sbjct: 271 --------------------MTQKDTITWNTLIAGF-ETLDSYESLCIFSQMVSEGFSPN 309
Query: 139 PFSFSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
F+F++V+ A + +A +C QQLH ++ G+ + N L+ Y C +
Sbjct: 310 CFTFTSVIAACANLA--ILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGN------- 360
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
+A + K+F + + + SWT+M+ G
Sbjct: 361 --VADSHKIF--SGMRHTNLVSWTSMMI-------------------------------G 385
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV---V 314
Y HG +EA D F +M GI+ D+ + +++SA + GL + G L + L T V
Sbjct: 386 YGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEG--LRYFRLMTSYYNV 443
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
P V + ++ G++ +A E+ + MP + D W A+L
Sbjct: 444 APDRDIYACV----VDLLSRAGRVKEAYELIENMPFKPDESIWVALLG 487
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 159/356 (44%), Gaps = 53/356 (14%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ + D+F L++ YS G ++ A+ +F+ V RD +S+N+++ AY N D
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV--RDLVSWNSIIAAYEQNNDP 304
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A++ F M+ G PD + ++ S ++++ + +
Sbjct: 305 STALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQR--------------------ISRS 344
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
+L I R+ D KD ++ Y + + A +
Sbjct: 345 ILGFVI----------------RREWLD------KDVVIGNALVNMYAKLGYMNCAHTVF 382
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLF 299
D + ++WN +++GY ++GL EA D + M + ++ T+ S+I A + G
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G ++HA +++ S + + V LI Y KCG+L A +F ++P V WNAI
Sbjct: 443 QQGMKIHAKLIKN----SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAI 498
Query: 360 LSGYINARRLEEAKFIFRE-VPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ R EEA +F++ + ER + +T+ ++S + SG +E K F+ M+
Sbjct: 499 IASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ 554
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F +L+ YS G + +A K+F PV +D S+NAM+ + N + A+ + R
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPV--KDVGSWNAMISGFCQNGNAAGALGVLNR 212
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK +G D + +++L + +++ + +H V+K G+ V N L++ Y
Sbjct: 213 MKGEGVKMDTITVASILPVCAQ-SDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ A+ +FD+ + +D SW ++IA Y +N+D ++A +
Sbjct: 272 R---------LQDAQMVFDQ--MEVRDLVSWNSIIAAYEQNNDPSTALRF---------- 310
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
F+ M GI+ D T SL S R + +V
Sbjct: 311 ---------------------FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV 349
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R + + + NAL+ Y K G + A VFD++P +D +SWN +++GY
Sbjct: 350 IRREWLDKD---VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLA 406
Query: 370 EEAKFIFREVPE-----RNLLTWTVMISGLAESGFGEESLKLFNQM 410
EA + + E N TW +I + G ++ +K+ ++
Sbjct: 407 SEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 140/339 (41%), Gaps = 79/339 (23%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +HA +L G ++ +LI++Y +I + FD +IFS +++SAY
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G A N + + +S GH PD ++F
Sbjct: 99 GKYHEA----------------MNCVNQLFSMCGGGH-------------LRPDFYTFPP 129
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
+L A + + +++HC V K G E V +A+
Sbjct: 130 ILKACVSLVDG----KKVHCCVFKMGF-----------------------EDDVFVAA-- 160
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
+++ Y R L A K+ M +WNAMISG+ ++G
Sbjct: 161 -----------------SLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNA 203
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
A +M G++MD T S++ + G +H +VL+ + S+ F V
Sbjct: 204 AGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD-SDVF---V 259
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+NALI Y+K G+L A+ VFD+M VRDLVSWN+I++ Y
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 175/407 (42%), Gaps = 34/407 (8%)
Query: 7 ANLFLAQLNHPSATQTLA--RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD 64
A+ F + L SA+ +L+ + +HA I+T G + + ++L Y + + YA LFD
Sbjct: 12 ASHFESLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFD 71
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR---DTISYNAMVKAYSHNLDGH 121
K P ++FS T++ Y G A +F + R D +Y ++KA S L
Sbjct: 72 KLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVD 131
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE-----WHCQQLHCDVVKWGVM---- 172
V + + + GF + F +++L + E+E + Q VV W +
Sbjct: 132 MGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQER-TVVSWNTLINGL 190
Query: 173 ----CVPSVLNTLL-----SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
C L + CA+ V + +L E ++ W +
Sbjct: 191 FRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNV 250
Query: 224 IAG------YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
+ YV+ ++ AR LL+GM V W +I+GYV +G A R M
Sbjct: 251 VVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLE 310
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
G++ + + SL+SA + G+ LHA+ +R ++ + + ALI Y KC +
Sbjct: 311 GVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESE----VVMETALIDMYAKCNE 366
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
+ +VF K + WNA+LSG+++ R A +F+E+ N+
Sbjct: 367 GNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENV 413
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 55/319 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ T L+ Y+ L+ K+F T + + T +NA++ + HN AV+LF
Sbjct: 350 EVVMETALIDMYAKCNEGNLSYKVFMKT--SKKRTAPWNAVLSGFVHNRLARNAVQLFKE 407
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M + PD +F+++L A +++A+ + +HC +VK G +C V + L+ Y C
Sbjct: 408 MLLENVQPDSPTFNSLLPAYAILADLK-QAMNMHCYLVKLGFLCKLEVASMLVDIYSKCG 466
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ + A ++FD PL KD +
Sbjct: 467 T---------LGYAHQIFDMIPLKDKD-------------------------------II 486
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W A+I Y +HG E A F +M G + +E T+TS++ A + GL + G L +
Sbjct: 487 IWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLM 546
Query: 310 LR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINA 366
L+ V+ +H+ ++ + G+L A + MP+ + W A+L +
Sbjct: 547 LKKYQVIPSVDHY-----TCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACVIH 601
Query: 367 RRLE----EAKFIFREVPE 381
+E A++ F PE
Sbjct: 602 ENVELGEIAARWTFELEPE 620
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ R LL Y G ++ A L N + +D +++ ++ Y N D +A+ L
Sbjct: 249 NVVVRNALLDMYVKCGEMEEARLLLNG--MEEKDVVTWTTLINGYVVNGDARSALMLCRS 306
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ +G P+ S +++L A + + H + LH ++ +
Sbjct: 307 MQLEGVKPNLVSVASLLSACGDLVSLK-HGKCLHAWAIRQNI------------------ 347
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
ES V+M +A +I Y + ++ + K+ +
Sbjct: 348 -----ESEVVMETA-------------------LIDMYAKCNEGNLSYKVFMKTSKKRTA 383
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNA++SG+V + L A F++M +Q D T+ SL+ A +H Y+
Sbjct: 384 PWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYL 443
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV--RDLVSWNAILSGYINAR 367
++ L V + L+ Y+KCG L A ++FD +P+ +D++ W AI+ Y
Sbjct: 444 VKLGFLCK----LEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHG 499
Query: 368 RLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
E A +F ++ + N +T+T ++ + +G ++ L LFN M
Sbjct: 500 YGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLM 546
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 159/347 (45%), Gaps = 56/347 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ +T LL Y+ + A K+FN V ++ + ++AM+ Y + A+ L+
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNT--VNKKNDVCWSAMIGGYVLHDSISDALALYDD 301
Query: 130 MK-RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M G P P + +T+L A + + + + ++LHC ++K G+ +V N+L+S Y C
Sbjct: 302 MLCIYGLNPTPATLATMLRACAQLTDLK-RGKKLHCHMIKSGMDLDTTVGNSLISMYAKC 360
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+M +A DE MIA
Sbjct: 361 G---------IMDNAVGFLDE-------------MIA--------------------KDT 378
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V+++A+ISG V++G E+A FR+M S GI T +L+ A + G H Y
Sbjct: 379 VSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGY 438
Query: 309 -VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
V+R + S+ NA+I Y+KCGK+ +RE+FD+M RD++SWN ++ GY
Sbjct: 439 TVVRGFTNDT-----SICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHG 493
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
EA +F+E+ L +T ++S + SG E F+ M
Sbjct: 494 LCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSM 540
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 133/324 (41%), Gaps = 56/324 (17%)
Query: 63 FDKTPNP----DIFSRTTLLSAYSAAGN-VKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
F P+P D + T L+ Y + N ++LA +F+ P + +N M++ Y+ +
Sbjct: 28 FSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKP--SVVLWNMMIRTYAWS 85
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
++ L++ M + G P F+F +L A C L + + +
Sbjct: 86 GPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA----------CSSLQALQLGRLIHTHAHI 135
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
L + Y+ T ++ Y + L A+
Sbjct: 136 LGLSMDLYVS---------------------------------TALLHMYAKCGHLYQAQ 162
Query: 238 KLLDGMTHPI--AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
L + ++H VAWNAMI+ + H L+ + + +M G+ + T S++
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
+ G+ +HAY +R + + + AL+ Y KC L AR++F+ + ++ V
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDN----VVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVC 278
Query: 356 WNAILSGYINARRLEEAKFIFREV 379
W+A++ GY+ + +A ++ ++
Sbjct: 279 WSAMIGGYVLHDSISDALALYDDM 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 53/322 (16%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ + D +L+S Y+ G + A + + +DT+SY+A++ N
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLD--EMIAKDTVSYSAIISGCVQNGYA 394
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ +F +M+ G AP + +L A S +A + H H V G S+ N
Sbjct: 395 EKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQ-HGTCCHGYTVVRGFTNDTSICNA 453
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
++ Y C T+ +R++FD + +D SW TMI GY
Sbjct: 454 IIDMYSKCGKITI---------SREIFDR--MQNRDIISWNTMIIGY------------- 489
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
G+ HGL EA F+++ ++G++ D+ T +++SA ++GL
Sbjct: 490 -GI-----------------HGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVT 531
Query: 301 CGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWN 357
G+ + + + ++P H+I ++ + G L +A +MP V ++ W
Sbjct: 532 EGKYWFSSMSQNFNIKPRMAHYI-----CMVDLLARAGNLDEAYTFIQRMPFVPNVRIWG 586
Query: 358 AILSGYINARRLEEAKFIFREV 379
A+L+ + +E + + +++
Sbjct: 587 ALLAACRTHKNIEMGEQVSKKI 608
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 174/399 (43%), Gaps = 84/399 (21%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IH L GF ++ N ++ +Y + A +FD+ P ++ S ++S
Sbjct: 143 VLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGC 202
Query: 82 SAAGNV--KLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
+A GN+ L L+N F RM+ G+ D
Sbjct: 203 AALGNLDYSLYADLWN------------------------------FFRRMQCQGYNADA 232
Query: 140 FSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
F+ +++L M ++ ++ H ++LHC +VK G L +C S V
Sbjct: 233 FTVASLL-PMCCDSDGKFDHGRELHCYLVKNG-----------LDLKMC--------SDV 272
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
M S ++I Y R++ L +R++ D M W AMI+GY
Sbjct: 273 HMGS-------------------SLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGY 313
Query: 259 VRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQP 316
V++G E A FR+M I+ + + S++ A GL G+Q+HA+ ++
Sbjct: 314 VQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMG-GKQVHAFSIKMEFND 372
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFI 375
+S+ NALI Y KCG L AR VFD +D ++W++I+S Y + +EA
Sbjct: 373 ----YISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTT 428
Query: 376 FREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ E+ ++ +++T ++S SG +E + ++N +
Sbjct: 429 YYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSL 467
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 42/313 (13%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
F T L+SAY+ G+ +++ +F++ V ++ +N+++ Y N A+ LF +M
Sbjct: 62 FLTTRLISAYATFGDSIMSKLVFDS--VHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMG 119
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
R PD ++ +T+ +S ++ + +H ++ G + V N+++S YI C
Sbjct: 120 R-CLLPDDYTLATI-SKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCRE- 176
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
A K+FDE P Q++ S+ +I+G
Sbjct: 177 --------FGDAMKVFDEMP--QRNVGSFNVIISG------------------------- 201
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT-GLFNCGRQLHAYVL 310
G + + LY + ++ FR+M G D +T SL+ ++ G F+ GR+LH Y++
Sbjct: 202 -CAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLV 260
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + + + ++LI Y++ KLV +R VFD+M R++ W A+++GY+ E
Sbjct: 261 KNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPE 320
Query: 371 EAKFIFREVPERN 383
A +FRE+ ++
Sbjct: 321 GALILFREMQRKD 333
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 50/283 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ ++L+ YS + + L+ ++F+ + R+ + AM+ Y N A+ LF
Sbjct: 271 DVHMGSSLIDMYSRSNKLVLSRRVFDQ--MKSRNIYVWTAMINGYVQNGAPEGALILFRE 328
Query: 130 MKR-DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M+R D P+ S +VL A L+ +Q+H +K S+ N L+ Y C
Sbjct: 329 MQRKDRIRPNRVSLVSVLPACGLLVGL-MGGKQVHAFSIKMEFNDYISLRNALIDMYAKC 387
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
S + AR++FD S+ A
Sbjct: 388 GS---------LDYARRVFDNGSYSKD--------------------------------A 406
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH-A 307
+ W+++IS Y HG +EA T+ +M GI+ D T ++SA +GL + G ++ +
Sbjct: 407 ITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNS 466
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
++PS + + ++ + G+L QA + +MP+
Sbjct: 467 LTTEYEMKPS----VEICGCVVDLLGRSGQLDQALDFIREMPI 505
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 173/395 (43%), Gaps = 83/395 (21%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+L + +H+ ++ +G L + L+D+Y K + A +FD ++ S T L++ Y
Sbjct: 279 SLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGY 338
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPF 140
G E A+++F M + G AP+ F
Sbjct: 339 VRGGGGYERE-------------------------------AMRMFSNMLLQGGVAPNCF 367
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+FS VL A + + + ++ +Q+H +K G+ + V N L+S Y A S +ES
Sbjct: 368 TFSGVLKACASLPDFDFG-EQVHGQTIKLGLSAIDCVGNGLVSVY---AKSGRMES---- 419
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
ARK FD L +K+ S T + V++ +L S +
Sbjct: 420 --ARKCFD--VLFEKNLVSETVVDDTNVKDFNLNSEQ----------------------- 452
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
D R++ +G + +TY SL+S + G G Q+HA V++ +
Sbjct: 453 --------DLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD--- 501
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
LSVNNALI+ Y+KCG A +VF+ M ++++W +I++G+ +A +F +
Sbjct: 502 -LSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNML 560
Query: 381 ER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
E N +T+ ++S + G +E+ K F M+
Sbjct: 561 ETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMR 595
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 46/310 (14%)
Query: 60 HHLFDKTPNP-DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
HH + P D +L++ YS + + A +F + + RD +SY++++ +++N
Sbjct: 75 HHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNR 134
Query: 119 DGHAAVKLFVRMK-RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
+ AV++F ++ +DG P+ + F+ V+ A L K G+ V
Sbjct: 135 NCLKAVEMFDQLLLQDGVYPNEYCFTAVIRAC------------LKGGFFKTGLCLFGFV 182
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
L T C L++ V S DL SAR
Sbjct: 183 LKTGYFDSHVCVGCELIDMFVKGCSLA---------------------------DLESAR 215
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNT 296
K+ D M V W MI+ ++G +EA D F +M S G D +T T LIS
Sbjct: 216 KVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEI 275
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
+ G++LH++V+R+ + L V +L+ Y KCG + +AR+VFD M +++SW
Sbjct: 276 QFLSLGKELHSWVIRSGLVLD----LCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSW 331
Query: 357 NAILSGYINA 366
A+++GY+
Sbjct: 332 TALVNGYVRG 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 40/195 (20%)
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPI--AVAWNAMISGYVRHGLYEEAFDTFRKMH-SMG 278
++I Y +++D +A + M + V+++++IS + + +A + F ++ G
Sbjct: 92 SLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDG 151
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK-C-- 335
+ +EY +T++I A G F G L +VL+T S + V LI + K C
Sbjct: 152 VYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSH---VCVGCELIDMFVKGCSL 208
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 395
L AR+VFDKM E+N++TWT+MI+ LA
Sbjct: 209 ADLESARKVFDKMR-------------------------------EKNVVTWTLMITRLA 237
Query: 396 ESGFGEESLKLFNQM 410
+ G+ +E++ LF +M
Sbjct: 238 QYGYNDEAIDLFLEM 252
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 50/333 (15%)
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
K+ D F T+L+ AYS G ++ A K+F+ P R +S+ +M+ AY N +
Sbjct: 163 KSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPD--RSVVSWTSMIVAYVQNECAEEGL 220
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
LF RM+ + F+ +++ A + + + +W +H V+K G+ + +L
Sbjct: 221 MLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKW----VHGYVIKNGIEINSYLATSL 276
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
L+ Y+ C + AR +FDE +S T G DDL
Sbjct: 277 LNMYVKCGD---------IGDARSVFDEFSVS--------TCGGG----DDL-------- 307
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
V W AMI GY + G + A + F I + T SL+SA
Sbjct: 308 -------VFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVM 360
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ LH V++ + + S+ N+L+ Y KCG + A VF +D+VSWN+++S
Sbjct: 361 GKLLHVLVVKYGLDDT-----SLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVIS 415
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
GY + EA +F + + L V + G+
Sbjct: 416 GYAQSGSAYEALDLFNRMRMESFLPDAVTVVGV 448
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 162/391 (41%), Gaps = 78/391 (19%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H +++ G + + L+++Y K +I A +FD+ FS +T
Sbjct: 254 GKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDE------FSVST-----CG 302
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G+ D + + AM+ Y+ AA++LF K P+ + +
Sbjct: 303 GGD----------------DLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLA 346
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++L A + + E + LH VVK+G + S+ N+L+ Y C L+ A
Sbjct: 347 SLLSACAQL-ENIVMGKLLHVLVVKYG-LDDTSLRNSLVDMYAKCG---------LIPDA 395
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+F A KD V+WN++ISGY + G
Sbjct: 396 HYVF--ATTVDKD-------------------------------VVSWNSVISGYAQSGS 422
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
EA D F +M D T ++SA + G G LH + L+ + S +
Sbjct: 423 AYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSS---IY 479
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V AL+ FY KCG AR VFD M ++ V+W A++ G + +FR++ +
Sbjct: 480 VGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEE 539
Query: 384 L----LTWTVMISGLAESGFGEESLKLFNQM 410
L + +T +++ + SG EE L +F+ M
Sbjct: 540 LVPNEVVFTTLLAACSHSGMVEEGLMIFDFM 570
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 100/407 (24%)
Query: 2 DSRTMANLF--LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYA 59
+S T+A+L AQL + + + +H ++ G T L RN L+D+Y K IP A
Sbjct: 341 NSVTLASLLSACAQLENI----VMGKLLHVLVVKYGLDDTSL-RNSLVDMYAKCGLIPDA 395
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
H++F T + +D +S+N+++ Y+ +
Sbjct: 396 HYVFATTVD---------------------------------KDVVSWNSVISGYAQSGS 422
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
+ A+ LF RM+ + F PD + VL A + + + LH +K+G
Sbjct: 423 AYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLS-LHGFALKYG--------- 472
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
LV S + + +A F Y + D SAR +
Sbjct: 473 -------------LVSSSIYVGTALLNF-------------------YAKCGDATSARMV 500
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
DGM AV W AMI G G + FR M + +E +T+L++A ++G+
Sbjct: 501 FDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMV 560
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNN--ALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
G + ++ + + +F+ S+ + ++ + G L +A + DKMPV+ V
Sbjct: 561 EEGLMIFDFMCKEL-----NFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGV--- 612
Query: 358 AILSGYINARRLEEAKFIFREVPERNLL-------TWTVMISGLAES 397
+ +++ L + F F EV R +L + V+IS L S
Sbjct: 613 GVFGAFLHGCGL-HSNFDFGEVAIRRMLELHPDQACYYVLISNLYAS 658
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 59/328 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD- 133
TTL+S Y++ G ++ A LF+ P S+ +++ + N D H+ V F + R
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHH--SFKLIIRWHFLN-DVHSHVVSFYNLARTT 128
Query: 134 -GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
G D FS +L S + + +LHC+++K VL +L+ Y C
Sbjct: 129 LGSFNDLVVFSILLKTASQLRDIVL-TTKLHCNILKSNA-ADSFVLTSLVDAYSKCGK-- 184
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ ARK+FDE P + SWT+MI YV+N+
Sbjct: 185 -------LRDARKVFDEIP--DRSVVSWTSMIVAYVQNE--------------------- 214
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
EE F +M + + +T SL++A G + G+ +H YV++
Sbjct: 215 ----------CAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKN 264
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR------DLVSWNAILSGYINA 366
++ + + S L+ Y KCG + AR VFD+ V DLV W A++ GY
Sbjct: 265 GIEINSYLATS----LLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQR 320
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGL 394
+ A +F + +L +V ++ L
Sbjct: 321 GYPQAALELFTDKKWYRILPNSVTLASL 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 209 EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAF 268
A L P TT+I+ Y L AR L + P ++ +I + + ++
Sbjct: 60 HASLIISGHPPDTTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVV 119
Query: 269 DTFRKMHS-MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
+ + +G D ++ L+ + +LH +L++ ++ F+L+ +
Sbjct: 120 SFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKS--NAADSFVLT---S 174
Query: 328 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
L+ Y+KCGKL AR+VFD++P R +VSW +++ Y+ EE +F + E
Sbjct: 175 LVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMRE 228
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 190 SSTLVESPVLMA--SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
S+ L+ S V ++ A LFDE P Q+D +W TMI GY R +D+ AR+L D M H
Sbjct: 72 STCLLNSYVFLSFLDACILFDEMP--QRDTVTWNTMILGYSRLEDVKKARQLFDEMPHRD 129
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNT---GLFNCGR 303
V+W MIS Y+ G Y ++ FR+M + GI+ D+ ++S + GL G+
Sbjct: 130 IVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHGLLG-GK 188
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+H Y +V+ + + AL+ Y K G L A V + M RD+ SW ++ G
Sbjct: 189 SVHGY----IVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGA 244
Query: 364 INARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ +EA +F ++ + N LT+T ++S A GF E+ + F ++
Sbjct: 245 VRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIE 296
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 59/325 (18%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LFD+ P D + T++ YS +VK A +LF+ P RD +S+ M+ AY +
Sbjct: 90 LFDEMPQRDTVTWNTMILGYSRLEDVKKARQLFDEMP--HRDIVSWCNMISAYLNVGSYM 147
Query: 122 AAVKLFVRMK-RDGFAPDPFSFSTVLGAMSLIAEEEWH----CQQLHCDVVKWGVMCVPS 176
++ LF RM +G PD VL S A E H + +H +VK G
Sbjct: 148 QSLYLFRRMLFVEGIKPDQVIACLVL---SGCAHVERHGLLGGKSVHGYIVKNGWELNVE 204
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
+ L++ Y A ++ + ++ +L DE +D SWT MI G VR
Sbjct: 205 IGAALVNMY---AKGGVLRNAAMVL---ELMDE-----RDVTSWTLMICGAVRC------ 247
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
G +EA F KM G++ +E T+T ++SA +
Sbjct: 248 -------------------------GFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHG 282
Query: 297 GLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLV 354
G GR+ + ++P +H+ L+ K G L +A E+ M V D+V
Sbjct: 283 GFVEDGRRYFKMIEECGLKPRVQHY-----ACLVYLIGKSGMLEEAYEIIKMMKVEPDVV 337
Query: 355 SWNAILSGYINARRLEEAKFIFREV 379
+ LS ++ E A+ + +V
Sbjct: 338 VLGSFLSACKEHKQFEIAEGVIEQV 362
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 104 TISYNAMVKAYSHNLDGHAAV-KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
T+ NA+++AY N+ H V +F M + +P+ +F +L + S HCQ L
Sbjct: 54 TLLCNALIRAY--NVHNHNKVFVIFTNMLANNVSPNTHTFPPLLKSSSAFVVTPLHCQAL 111
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
K G++ P VL TLL Y A + + A+K+F+E P+ +
Sbjct: 112 -----KRGILSDPFVLTTLLVVY---ARTNHI------VCAQKVFEEVPMFCIVASN--A 155
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG---- 278
MI + N ++ A + + M + V+W M++G+ G + A F M
Sbjct: 156 MINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLD 215
Query: 279 --IQMDEYTYTSLISASF---NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
++ +E TY S++S+ G + GRQ+H Y++ V + V +LI Y
Sbjct: 216 CLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLG----VFVGTSLINLYG 271
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTV 389
K G L + VF M VR++ +WNA++S + R +EA +F ++ + L +T+
Sbjct: 272 KMGCLNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVA 331
Query: 390 MISGLAESGFGEESLKLFNQM 410
+++ A GF E L+LF M
Sbjct: 332 VLTACARGGFVSEGLELFESM 352
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 150/368 (40%), Gaps = 50/368 (13%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S++ + +H L G P + L+ +Y ++++I A +F++ P I + +
Sbjct: 97 SSSAFVVTPLHCQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAM 156
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
++A++ GN++ A +F P RD +S+ MV ++ + + AA++ F M R
Sbjct: 157 INAFTMNGNMEGALLVFEWMP--YRDVVSWTTMVNGFALSGNFGAAIRFFGTMMR----- 209
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
H L C +VK SVL +S T +E
Sbjct: 210 --------------------HKDVLDC-LVKPNEATYVSVL----------SSCTELEGK 238
Query: 198 VLMASARKLFDEAPLSQKDEPSW--TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ R++ + D + T++I Y + L + + M WNAMI
Sbjct: 239 GALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAMI 298
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TV 313
S +G +EA D F KM G++ + T+ ++++A G + G +L + V
Sbjct: 299 SSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQV 358
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
V EH+ ++ + G + +A E+ MP +L ++ A R+ A
Sbjct: 359 VPVMEHY-----GCVVDLLGRAGHIQEAAEIIRNMP---FPPDKTVLGAFLGACRIHGAI 410
Query: 374 FIFREVPE 381
+ E+ +
Sbjct: 411 ELGEEIAK 418
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 175/411 (42%), Gaps = 91/411 (22%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
+ QL+H + + HA I+ G + P I +LID Y +
Sbjct: 23 YTDQLHHCKTIDRI-KQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGT------------- 68
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
NV+ A K+F+ ++ RD +N ++K Y++ A+ ++
Sbjct: 69 ----------------NVEHARKVFD--DLSERDVFCWNNVIKGYANMGPFAEALHVYNA 110
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ---LHCDVVKWGVMCVPSVLNTLLSCYI 186
M+ G AP+ +++ VL A E C + +H +VVK G+
Sbjct: 111 MRLSGAAPNRYTYPFVLKACG----AERDCLKGRIIHGNVVKCGL--------------- 151
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
E + + +A +A Y + ++ ++RK+ D M
Sbjct: 152 --------EFDLFVGNA-------------------FVAFYAKCKEIEASRKVFDEMLER 184
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQM-DEYTYTSLISASFNTGLFNCGRQ 304
V+WN+M+SGY+ +G +EA F M GI D T +++ A + G
Sbjct: 185 DIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYW 244
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H Y+++T ++ +V LIT Y+ CG + A+ VFD++P R+++ W+AI+ Y
Sbjct: 245 IHCYIVKTGMKLDP----AVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYG 300
Query: 365 NARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+EA +FR++ E L + + ++S + +G EE LF M+
Sbjct: 301 MHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTME 351
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 171/396 (43%), Gaps = 70/396 (17%)
Query: 21 QTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
LA ++HA + G I N LI+ Y K N A +FD P
Sbjct: 126 HKLAHSLHACTVRLGLDSDLYIANALINTYAKFHN---AGKVFDVFPK------------ 170
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDP 139
+ +K+F+ PV RD +S+N ++ ++ N A+ + M ++G PD
Sbjct: 171 -RGESGIDCVKKVFDMMPV--RDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDS 227
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
F+ S++L + AE H DV K + +V N + V
Sbjct: 228 FTLSSIL---PIFAE--------HVDVNKGKEIHGYAVRNGF-------------DGDVF 263
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ S ++I Y + + L + + + A++WN++I+G V
Sbjct: 264 IGS-------------------SLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCV 304
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++G ++ FR+M ++ +++S+I A + + GRQLH ++R +E
Sbjct: 305 QNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNE- 363
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
FI S +L+ Y KCG + AR VFD++ RD+V+W AI+ G +A +F +
Sbjct: 364 FIAS---SLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENM 420
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
E + + + +++ + +G +E + FN M+
Sbjct: 421 LEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSME 456
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 136/306 (44%), Gaps = 33/306 (10%)
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++++++K Y+ + H + F M+ P+ F ++L A +L+ + LH
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKL-AHSLHAC 135
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
V+ G+ + N L++ Y +A K+FD P ++ E
Sbjct: 136 TVRLGLDSDLYIANALINTY------------AKFHNAGKVFDVFP--KRGESG------ 175
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEY 284
+ +K+ D M V+WN +I+G+ ++G+Y EA D R+M G ++ D +
Sbjct: 176 -------IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSF 228
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T +S++ N G+++H Y +R + + ++LI Y KC +L +
Sbjct: 229 TLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGD----VFIGSSLIDMYAKCNRLECSLRA 284
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
F +P +D +SWN+I++G + + FR + + N+ V S + + +L
Sbjct: 285 FYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTAL 344
Query: 405 KLFNQM 410
L Q+
Sbjct: 345 SLGRQL 350
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 147/364 (40%), Gaps = 83/364 (22%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IHA IL + +R ++ + +++ Y K I A FD+
Sbjct: 269 LGKQIHARILKSNWR-NLIVDSAVVNFYSKCGKISSAFRTFDRMAK-------------- 313
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
RD + + ++ A S + GH A+ L +M DGF P+ ++
Sbjct: 314 -------------------RDVVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTI 354
Query: 143 STVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
L A + + C QLH +VK + +S V +
Sbjct: 355 CAALKACG--ENKAFKCGTQLHGAIVK-----------------------KICKSDVFIG 389
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
T++I Y + ++ S++K+ D M W ++ISGY R+
Sbjct: 390 -------------------TSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARN 430
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EEA + FR M + +++ T +++A GR++HA +++V+ +
Sbjct: 431 GFGEEALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTN---- 486
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
+ + L+ FY +C A V +P+RD+VSW AI+SG EA RE+ E
Sbjct: 487 MYIETTLVWFYCRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMME 546
Query: 382 RNLL 385
+L
Sbjct: 547 EGVL 550
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 145/347 (41%), Gaps = 77/347 (22%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+ K D+F T+L+ Y+ G + ++K+F+ V R+T ++ +++ Y+ N G
Sbjct: 377 IVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKV--RNTATWTSIISGYARNGFGE 434
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE----EEWHCQQLHCDVVKWGVMCVPSV 177
A+ F MKR + + V+ A I E H Q+ + SV
Sbjct: 435 EALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQK------------IKSV 482
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
+ L + YI TT++ Y R D + A
Sbjct: 483 I--LTNMYI---------------------------------ETTLVWFYCRCKDYSHAF 507
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
+L + V+W A+ISG R GL EA + R+M G+ + YTY+S + A
Sbjct: 508 NVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEGVLPNSYTYSSALKA----- 562
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
C + L L V VN+ALI Y KCG + A +VFD MP R+LVSW
Sbjct: 563 ---CAK-LETPALSNVF---------VNSALIYMYAKCGYIADAFQVFDNMPERNLVSWK 609
Query: 358 AILSGYINARRLEEA-KFIFRE-----VPERNLLTWTVMISGLAESG 398
A++ GY +A + ++R V + +LT + G +SG
Sbjct: 610 AMILGYARNGHCRKALQLMYRMRAEGFVVDDYILTTVLTACGGIDSG 656
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 93/341 (27%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAY-SHNLDGHAAVKLFVRMKRDGF 135
L+ +Y G + A K+F+ ++ R+T+++ A++ Y ++LD A KLF + G
Sbjct: 191 LICSYLRLGKLAQARKVFDG--MSRRNTVTWTAIIDGYLKYDLDDEA-FKLFHGSIKHGV 247
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL-- 193
P+ F + +CC L
Sbjct: 248 QPNSKMFVCFMN--------------------------------------LCCKRVDLAL 269
Query: 194 ---VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ + +L ++ R L + + ++ Y + ++SA + D M V
Sbjct: 270 GKQIHARILKSNWRNLIVD-----------SAVVNFYSKCGKISSAFRTFDRMAKRDVVC 318
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W +I+ +HGL EA +M G +EYT + + A F CG QLH ++
Sbjct: 319 WTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIV 378
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + + S+ FI +LI Y KCG++V +++VFD+M VR+ +W +I+SGY
Sbjct: 379 KKICK-SDVFI---GTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGY------- 427
Query: 371 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
A +GFGEE+L F MK
Sbjct: 428 ------------------------ARNGFGEEALNFFRLMK 444
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
V+N LI Y + GKL QAR+VFD M R+ V+W AI+ GY+ +EA +F
Sbjct: 187 VDNNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLF 239
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 44/368 (11%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N D+ L+ Y+ ++++A +F+ RD +++ M+ Y+ D + A++LF
Sbjct: 125 NDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLF 184
Query: 128 VRMKR--DGFAPDPFSFSTVLGAMS----LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
M + + P+ F+ S VL + + LI + H L ++ V+ V N L
Sbjct: 185 SEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVA---NCL 241
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y + S V++ A+ +FD +S+++ SWT+++ GY + A ++ D
Sbjct: 242 IDMY---SKSGDVDT------AQVVFD--SMSKRNAISWTSLLTGYGMHGCSEDAFRVFD 290
Query: 242 GMTHPI-----AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
M +WN + G H L + F K+ + I +++T + ++ +
Sbjct: 291 EMRKEALSFGNGGSWNRFVXGDANHAL--QLFSEMFKIDNC-IVPNDFTISCVLMSCARL 347
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G+Q+HA+VLR S+ +L V N LI Y+K G + A+ VFD M R+ VSW
Sbjct: 348 SALKFGKQIHAHVLRRSHSNSD--VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSW 405
Query: 357 NAILSGYINARRLEEAKFIFREVPERNLLT--------------WTVMISGLAESGFGEE 402
++L+GY R E+A +F E+ + L+ + M+ L +G E
Sbjct: 406 TSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACKHYACMVDLLGRAGRLGE 465
Query: 403 SLKLFNQM 410
+++L N M
Sbjct: 466 AMRLINDM 473
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 144/321 (44%), Gaps = 21/321 (6%)
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ 160
+D +++NAMV YS N A+ LF +M+ + D ++S+V+ S A+ + C+
Sbjct: 13 FKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVI---SGYAQRGFGCE 69
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK--LFDEAPLSQKDEP 218
+ G C P+V+ + C + L+ + K L E D
Sbjct: 70 AMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDNDDLA 129
Query: 219 SWTTMIAGYVRNDDLASARKLLDGM--THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
+I Y + L AR + D + V W MI GY ++G A F +M
Sbjct: 130 VINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFK 189
Query: 277 MG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
I +++T + ++ + G+ +HAYVLR + S+ +L V N LI Y+K
Sbjct: 190 FDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSD--VLFVANCLIDMYSK 247
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTV 389
G + A+ VFD M R+ +SW ++L+GY E+A +F E+ + N +W
Sbjct: 248 SGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWNR 307
Query: 390 MISGLAESGFGEESLKLFNQM 410
+ G A +L+LF++M
Sbjct: 308 FVXGDA-----NHALQLFSEM 323
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI----AVAWNAMI 255
M A K+++ KD +W M+ GY +N A L M I V W+++I
Sbjct: 1 MEDASKVYERMRF--KDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVI 58
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
SGY + G EA D FRKM + + SL+SA + G G++ H Y ++ +++
Sbjct: 59 SGYAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILK 118
Query: 316 P---SEHFILSVNNALITFYTKCGKLVQAREVFDKM--PVRDLVSWNAILSGYINARRLE 370
++ L+V NALI Y KC L AR +FD++ RD+V+W ++ GY
Sbjct: 119 GEHNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDAN 178
Query: 371 EAKFIFREV 379
A +F E+
Sbjct: 179 HALQLFSEM 187
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLA 395
A +V+++M +D+V+WNA+++GY R E+A +F E+ E +++TW+ +ISG A
Sbjct: 3 DASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYA 62
Query: 396 ESGFGEESLKLFNQM 410
+ GFG E++ +F +M
Sbjct: 63 QRGFGCEAMDVFRKM 77
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 87/369 (23%)
Query: 23 LARAIHAHILTTGFRLTPL--IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
+ IHA++L + + + N LID+Y KS ++ A +FD + S T+LL+
Sbjct: 216 FGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTG 275
Query: 81 YSAAGNVKLAEKLFN---ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR--DGF 135
Y G + A ++F+ ++ + S+N V D + A++LF M + +
Sbjct: 276 YGMHGCSEDAFRVFDEMRKEALSFGNGGSWNRFVXG-----DANHALQLFSEMFKIDNCI 330
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVK--WGVMCVPSVLNTLLSCYICCASSTL 193
P+ F+ S VL + + ++ ++ +Q+H V++ V V N L+ Y + S
Sbjct: 331 VPNDFTISCVLMSCARLSALKFG-KQIHAHVLRRSHSNSDVLFVANCLIDMY---SKSGD 386
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
V+ +A+ +FD +S+++ SWT+++ GY GM
Sbjct: 387 VD------TAQVVFD--SMSKRNAVSWTSLLTGY--------------GM---------- 414
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
HG E+AF F +M + +D T+ V
Sbjct: 415 -------HGRSEDAFRVFDEMRKEALVLDGITFL------------------------VV 443
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSGYINARRLEEA 372
+ +H+ ++ + G+L +A + + MP+ V W A+LS E A
Sbjct: 444 LYACKHYA-----CMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELA 498
Query: 373 KFIFREVPE 381
+F +++ E
Sbjct: 499 EFAAKKLLE 507
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 162/384 (42%), Gaps = 78/384 (20%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
IH+ I+ G + + N L+ +Y K+ + A HLFD+ PN D+ S TT+LS+++
Sbjct: 35 CIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKT- 93
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
H+ D A++LF M G P+ F+ S+
Sbjct: 94 -----------------------------KHHSD---ALQLFDMMIGSGEYPNEFTLSSA 121
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
L + + E E Q+HC VK G+ V +L+ Y C + VE+ L++ +
Sbjct: 122 LRSCFALGEFE-RGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCS-VEAWKLLSLVK- 178
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE 265
D SWTTM++ V N G +
Sbjct: 179 -------DGGDVVSWTTMLSSLVEN-------------------------------GKWG 200
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
EAF+ + KM G+ +E+T+ L+ A + + G+ LHA+++ + + L +
Sbjct: 201 EAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELN----LVLK 256
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
A++ Y+KC ++V A +V + P D+ W ++SG+ ++ EA +FR++ LL
Sbjct: 257 TAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLL 316
Query: 386 TWTVMISGLAESGFGEESLKLFNQ 409
S L + SL L Q
Sbjct: 317 PNNFTYSSLLNASSSILSLDLGEQ 340
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 185/462 (40%), Gaps = 123/462 (26%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HAH++ G L +++ ++D+Y K + A + + TP D++ TTL+S ++
Sbjct: 237 GKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFT- 295
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
NL A+ +F M+ G P+ F++S
Sbjct: 296 --------------------------------QNLQVREAISVFRDMELSGLLPNNFTYS 323
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++L A S I + +Q H V+ G+ + N L+ Y+ C+ T +A
Sbjct: 324 SLLNASSSILSLDLG-EQFHSRVIIVGLEDDLYIGNALVDMYMKCSHIT--------TNA 374
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYV--RNDD--------------------------LAS 235
K+F E ++ + WT++IAG+ R +D +
Sbjct: 375 VKVFRE--ITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSK 432
Query: 236 ARKLLDGMTH-----------PIAVAWNAMISGYVRHGLYEEAFDTFRKM---------- 274
R L+ M IAVA NA++ Y G+ +EA+ M
Sbjct: 433 TRSLVPTMMLHGHIIKTKVDIDIAVA-NALVDTYAGVGMIDEAWSVIGTMNLRDSITYTC 491
Query: 275 ----------HSM-----------GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
H M GI+MDE++ S +SA+ G G+QLH Y +++
Sbjct: 492 LAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSG 551
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
Q SV+N+L+ Y+KCG + A F + D SWN ++SG+ + A
Sbjct: 552 FQRCH----SVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHAL 607
Query: 374 FIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
F ++ + + +T +IS + G E L+ F+ M+
Sbjct: 608 STFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQ 649
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 119/295 (40%), Gaps = 56/295 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ + DI L+ Y+ G + A + + LRD+I+Y + A N G
Sbjct: 445 HIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGT--MNLRDSITYTCL--AARLNQKG 500
Query: 121 H--AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
H A+K+ + M DG D FS ++ L A + + E +QLHC VK G SV
Sbjct: 501 HHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG-KQLHCYSVKSGFQRCHSVS 559
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
N+L+ Y C S + A +
Sbjct: 560 NSLVHLYSKCGS------------------------------------------IHDANR 577
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
++ P A +WN +ISG+ +GL A TF M G++ D T SLISA + GL
Sbjct: 578 AFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGL 637
Query: 299 FNCGRQ-LHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
G + H+ + P +H++ L+ + G+L +A V +KM +
Sbjct: 638 LELGLEYFHSMQKEYHITPKLDHYM-----CLVDLLGRGGRLEEAMGVIEKMSFK 687
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C S++L E + + KL Q D +++ Y + + AR L D M +
Sbjct: 25 CNSNSLKEGICIHSPIIKLG-----LQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V+W ++S + + + +A F M G +E+T +S + + F G F G Q+H
Sbjct: 80 VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKL-VQAREVFDKMP-VRDLVSWNAILSGYIN 365
++ ++ + V +L+ FYTKCG V+A ++ + D+VSW +LS +
Sbjct: 140 SAVKLGLEMNRF----VGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195
Query: 366 ARRLEEAKFIFREVPERNL 384
+ EA I+ ++ E +
Sbjct: 196 NGKWGEAFEIYVKMIESGV 214
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 6/181 (3%)
Query: 232 DLASARKLLDGMTH-PIAVAWNAMISGYVRHGL-YEEAFDTFRKMHSMGIQMDEYTYTSL 289
+L A KL D M + W ++I ++ H + TF MH GI +T++S+
Sbjct: 62 NLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSV 121
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
++A G+Q+HA ++++ ++ V AL+ Y KCG + AR+VFD M
Sbjct: 122 LNACGRVPAVFEGKQVHARLVQSGFLGNK----IVQTALLDMYAKCGYVCDARDVFDGMV 177
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
RD+V+W A++ GY A R+ +A+ +F + ERN TWT M++G A G + +++L++
Sbjct: 178 DRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDV 237
Query: 410 M 410
M
Sbjct: 238 M 238
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 169/410 (41%), Gaps = 74/410 (18%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAY-SHNL 118
HH FD+ + R SA + N+ A KLF+ P + + ++++A+ SH+
Sbjct: 43 HHFFDR-----LLFRVLHFSAEKS--NLYYAHKLFDTMP-NCSNCFIWTSLIRAFLSHHT 94
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
+ F M + G P F+FS+VL A + + +Q+H +V+ G + V
Sbjct: 95 HFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAV-FEGKQVHARLVQSGFLGNKIVQ 153
Query: 179 NTLLSCYICCAS--------STLVESPVL--------------MASARKLFDEAPLSQKD 216
LL Y C +V+ V+ M AR LFD + +++
Sbjct: 154 TALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDN--MGERN 211
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG------------------- 257
+WTTM+AGY D+ +A +L D M V W AMI+G
Sbjct: 212 SFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPV 271
Query: 258 -------------YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
Y ++G EA + + KM I++ + ISA
Sbjct: 272 PLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNL 331
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
L Y + H V+NALI +KCG + A F+ M RDL +++A+++ +
Sbjct: 332 L-TYDIEEGFCEKTHI---VSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFA 387
Query: 365 NARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ ++A +F ++ + L +T+ +++ + SG EE + F M
Sbjct: 388 EHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIM 437
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 161/392 (41%), Gaps = 62/392 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HA ++ +GF +++ L+D+Y K + A +FD + D+ + T ++ Y+
Sbjct: 134 GKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAK 193
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
AG + A LF+ + R++ ++ MV Y++ D AA++L+ M + ++
Sbjct: 194 AGRMVDARLLFD--NMGERNSFTWTTMVAGYANYGDMKAAMELYDVMN----GKEEVTWV 247
Query: 144 TVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY--------------- 185
++ G + ++E ++ V PS LL+CY
Sbjct: 248 AMIAGYGKLGNVSEARRIFDEI-------PVPLNPSTCAALLACYAQNGHAREAIEMYEK 300
Query: 186 -----ICCASSTLVESPVLMASARKL-------FD-EAPLSQKDEPSWTTMIAGYVRNDD 232
I +V + A R + +D E +K +I + +
Sbjct: 301 MRRAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGN 360
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+ A + + M + ++AMI+ + HG ++A D F KM G+ ++ T+ +++A
Sbjct: 361 IDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNA 420
Query: 293 SFNTGLFNCGRQLHAYVLRTV-VQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
+GL G + + ++P EH+ ++ + G+L +A + +
Sbjct: 421 CSTSGLIEEGCRFFQIMTGVYGIEPLPEHY-----TCMVDLLGRAGQLEKAYSLIKENST 475
Query: 351 R-DLVSWNAILS----------GYINARRLEE 371
D +W ++L+ G I AR L E
Sbjct: 476 SADATTWGSLLAACRVYGNVELGEIAARHLFE 507
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 27/334 (8%)
Query: 89 LAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD---GFAPDPFSFS 143
+ LF+ P L + +N ++++YS +L H ++K F + + D F+ +
Sbjct: 59 ITSSLFHHYPFHNNLTSLLLFNNLIRSYSLSLFPHESLKFFTHTLNNLTHSLSLDSFTLT 118
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ A + + + LHC V K G V LL Y + + A
Sbjct: 119 FLAHACANLDTTHFGF-HLHCIVCKMGFENHVFVQTGLLHMY---------SNWGFLVDA 168
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
++F E P ++ +W I+G ++ L AR + D M V+W +I GY R
Sbjct: 169 AQVFGEMP--DRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNK 226
Query: 264 YEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+A FRKM + GI+ +E T ++ A + G +H YV + + +
Sbjct: 227 PLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVD---I 283
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMP--VRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+ NALI Y KCG + A +F +MP R+ VSWN+++SGY + EA F ++
Sbjct: 284 RIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKME 343
Query: 381 ER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ N + + ++S + SG EE L+ F +M
Sbjct: 344 KAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKM 377
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 161/387 (41%), Gaps = 56/387 (14%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+DS T+ FLA T +H + GF ++ L+ +Y + A
Sbjct: 112 LDSFTLT--FLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAA 169
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+F + P+ + + +S G ++ A +F+ + +R +S+ ++ Y+
Sbjct: 170 QVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDR--MVVRSVVSWTLVIDGYTRMNKP 227
Query: 121 HAAVKLFVRM-KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP-SVL 178
A+ LF +M + DG P+ + TV A++ + + C+ +H V K G V ++
Sbjct: 228 LKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKM-CESVHGYVEKRGFNAVDIRIV 286
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
N L+ Y C + SA LF E P W RN
Sbjct: 287 NALIDLYAKCGC---------IESASGLFSEMP-------DWR-------RN-------- 315
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+V+WN+++SGY G+ EA DTF KM G++ + + S++SA ++GL
Sbjct: 316 ---------SVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGL 366
Query: 299 FNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP--VRDLV 354
G + ++ +V +H+ +I + G+L +A +V ++P + V
Sbjct: 367 VEEGLEFFGKMVNDYGLVPDIKHY-----GCVIDMLGRAGRLGEAEKVALEVPHEAANDV 421
Query: 355 SWNAILSGYINARRLEEAKFIFREVPE 381
W +L +E K + +++ E
Sbjct: 422 IWRTLLGACSVHDNVEIGKRVTKKILE 448
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 22/255 (8%)
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
Q+H VVK+G V +L+ Y C LMA A+ +F + + D SW
Sbjct: 4 QVHGQVVKYGFGSDFHVQRSLVCMYGCLCD--------LMA-AKCIFK--MMGRFDVASW 52
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T MI GY + D+ SARKL D M V W+ MI+GY+R+ +++A + F + G+
Sbjct: 53 TCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLV 112
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+E +SA + G G + + + +R + + + + A++ Y +CG + +
Sbjct: 113 ANE---VGAVSACAHLGALAAGEKAYEHAIRINLDLN----VILGTAIVDMYARCGNVEK 165
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAE 396
A VF++M +D++SW +++SG EEA F + + + +T+T ++ +
Sbjct: 166 AVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSH 225
Query: 397 SGFGEESLKLFNQMK 411
G E+ ++F MK
Sbjct: 226 GGLVEKGQEIFESMK 240
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 63/347 (18%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ +H ++ GF ++ L+ +Y ++ A +F D+ S T ++ Y
Sbjct: 1 MGMQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYF 60
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G+V A KLF+ PV ++ ++++ M+ Y N AV++F + +G +
Sbjct: 61 KCGDVDSARKLFDRMPV--KNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEVGA 118
Query: 143 STV---LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYICCASSTLVESPV 198
+ LGA++ + H +++ D + +L T ++ Y C + VE V
Sbjct: 119 VSACAHLGALAAGEKAYEHAIRINLD--------LNVILGTAIVDMYARCGN---VEKAV 167
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
++F+E + +KD SWT+ +ISG
Sbjct: 168 ------RVFEE--MKEKDVISWTS-------------------------------LISGV 188
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS 317
HG EEA + F M GI + T+T+++ A + GL G+++ + R ++P
Sbjct: 189 AMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPR 248
Query: 318 -EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
EH+ ++ + GKL +A +MP++ SGY
Sbjct: 249 LEHY-----GCMVDLLGRAGKLEEAENFILEMPIKPNAPMKPEHSGY 290
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 57/348 (16%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISY-NAMVKAYSHNLDGHAAVKLF 127
PD +LLS Y G + AE+LF + + +I Y N M+ Y ++LF
Sbjct: 349 PDEMVDNSLLSMYCKFGMLSFAERLFQRS----QGSIEYWNFMIVGYGRIGKNVKCIQLF 404
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M+ G + + + + + E + +HC+V+K V SV N+L+ Y
Sbjct: 405 REMQYLGIRSESVGIVSAIASCGQLGEINLG-RSIHCNVIKGFVDETISVTNSLIEMYGK 463
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C M + ++F+ S++D
Sbjct: 464 CDK---------MNVSWRIFNR---SERD------------------------------- 480
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+ WNA+IS ++ YEEA F M + T ++SA + G +LH
Sbjct: 481 VILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHR 540
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
Y+ + + L + AL+ Y KCG+L ++REVFD M +D++ WNA++SGY
Sbjct: 541 YINEKGFKLN----LPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNG 596
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
E A IF + E N+ +T+ ++S A +G EE +F +M+
Sbjct: 597 YAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQ 644
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 160/407 (39%), Gaps = 93/407 (22%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
++ +S YS + A K+F+ PV RD +++ A+V Y N + ++ M R G
Sbjct: 150 SSFVSLYSRCDEMNDAVKVFDEIPV--RDVVAWTALVIGYVQNGESEMGLECISEMYRVG 207
Query: 135 FAPDPFSFSTVLGAMSLIAE--EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
+ T+ G + + LH VVK G+ C+ + +++LS Y C
Sbjct: 208 DDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCG--- 264
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL----------DG 242
+ A + F E + KD SWT+MI Y R ++ + DG
Sbjct: 265 ------VPREAYQSFSE--VINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDG 316
Query: 243 MT-----------------------------HPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
M P + N+++S Y + G+ A F++
Sbjct: 317 MVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR 376
Query: 274 ------------------------------MHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
M +GI+ + S I++ G N GR
Sbjct: 377 SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGR 436
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+H V++ V + +SV N+LI Y KC K+ + +F++ RD++ WNA++S +
Sbjct: 437 SIHCNVIKGFVDET----ISVTNSLIEMYGKCDKMNVSWRIFNRSE-RDVILWNALISAH 491
Query: 364 INARRLEEAKFIFR----EVPERNLLTWTVMISGLAESGFGEESLKL 406
I+ + EEA +F E N T V++S + F E+ +L
Sbjct: 492 IHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERL 538
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 53/298 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+L+ Y + ++ ++FN + RD I +NA++ A+ H A+ LF M +
Sbjct: 455 NSLIEMYGKCDKMNVSWRIFNRSE---RDVILWNALISAHIHVKHYEEAISLFDIMIMED 511
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ + VL A S +A E ++LH + + G
Sbjct: 512 QNPNTATLVVVLSACSHLAFLE-KGERLHRYINEKGF----------------------- 547
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ + P T ++ Y + L +R++ D M + WNAM
Sbjct: 548 -------------------KLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAM 588
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
ISGY +G E A + F M ++ +E T+ SL+SA + GL G+ + A + V
Sbjct: 589 ISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSV 648
Query: 315 QPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLE 370
+P+ +H+ ++ + L +A E+ MP+ D W A+LS ++E
Sbjct: 649 KPNLKHY-----TCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIE 701
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN+ + LY + + M S + + +T+ + S+ + + G LHA
Sbjct: 78 WNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALAC 137
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+ P +V ++ ++ Y++C ++ A +VFD++PVRD+V+W A++ GY+
Sbjct: 138 KVGFFPENS---AVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYV 188
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 162/384 (42%), Gaps = 89/384 (23%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARA--IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPY 58
M R + FL L S L + IHA ++ T + + N L+ Y KSSN Y
Sbjct: 1 MIGRALLEPFLLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHY 60
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
AH LFDK PN ++ + TTL+S++ + Y ++ KA+
Sbjct: 61 AHKLFDKMPNRNVVTWTTLISSH-----------------------LKYGSVSKAF---- 93
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSV 177
++F M+ P+ +F+ +L A + E W Q+H +V+ G+
Sbjct: 94 ------EMFNHMRVSDERPNENTFAVLLRACT--NRELWSVGLQIHGLLVRCGL------ 139
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRN-DDLASA 236
++++ + ++++ Y++ DDL A
Sbjct: 140 ------------------------------------EREKFAGSSLVYMYLKGGDDLRDA 163
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFN 295
++ G+ VAWN MISG+ ++G + F +M G++ D T+ SL+
Sbjct: 164 LRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKC--- 220
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
+ N Q+H V + + + V +A++ Y KC + R++FD M +D
Sbjct: 221 CSVLNEVMQIHGIVYKFGAEVD----VVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFV 276
Query: 356 WNAILSGYINARRLEEAKFIFREV 379
W++++SGY R EEA F+++
Sbjct: 277 WSSMISGYTMNNRGEEAVNFFKDM 300
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 52/290 (17%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM- 130
F+ ++L+ Y G+ L + L + RD +++N M+ ++ N D +LF M
Sbjct: 144 FAGSSLVYMYLKGGD-DLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMW 202
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+ G PD +F+++L S++ E Q+H V K+G
Sbjct: 203 EEQGLKPDRITFASLLKCCSVLNE----VMQIHGIVYKFGA------------------- 239
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
E V++ SA M+ Y + D++S RK+ D M
Sbjct: 240 ----EVDVVVESA-------------------MVDLYAKCRDVSSCRKIFDSMEKKDNFV 276
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W++MISGY + EEA + F+ M +++D++ +S + A N G Q+H ++
Sbjct: 277 WSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMI 336
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
+ Q ++ F+ SV L+ Y G+L ++F ++ +D+V+WN+++
Sbjct: 337 KNGHQ-NDCFVASV---LLNLYASFGELGDVEKLFSRIDDKDIVAWNSMI 382
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T+++ Y ++ + A KL D M + V W +IS ++++G +AF+ F M +
Sbjct: 46 NTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDER 105
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG-KLV 339
+E T+ L+ A N L++ G Q+H ++R ++ E F ++L+ Y K G L
Sbjct: 106 PNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLE-REKF---AGSSLVYMYLKGGDDLR 161
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
A VF + RD+V+WN ++SG+ + +F E+ E L
Sbjct: 162 DALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGL 207
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 30/317 (9%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH--- 158
R T+ NA+V YS A K FV + R D S+S+++G E
Sbjct: 445 RHTLVGNALVHMYSECKQIDDAFKAFVDIVR----KDDSSWSSIIGTCKQNRMESKALEL 500
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP 218
C+++ + + + +P ++ C T+ E L A K D
Sbjct: 501 CKEMLDEGINFTSYSLPLCISA------CSQLLTISEGKQLHVFAIK-----SGYSCDVY 549
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
+++I Y + ++ + K+ D P V +NA+ISGY HG ++A + K+ G
Sbjct: 550 IGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNG 609
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQP-SEHFILSVNNALITFYTKCG 336
+ + T+ +L+SA + G L +L + ++P SEH+ + L+ Y + G
Sbjct: 610 VAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHY-----SCLVDAYGRAG 664
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSG---YINARRLEEAKFIFREVPERNLLTWTVMISG 393
+L +A ++ K +W +LS + N + E++ E+ + + ++ +
Sbjct: 665 RLEEAYQIVQKDGSES--AWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNI 722
Query: 394 LAESGFGEESLKLFNQM 410
E G EE+L +M
Sbjct: 723 YIEEGNWEEALNCRKKM 739
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 105/222 (47%), Gaps = 30/222 (13%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ ++++ Y+ GN++ +EK+F+ + +++NA++ Y+H+ A+++ +
Sbjct: 547 DVYIGSSIIDMYAKCGNIEESEKVFDEQLKP--NEVTFNAIISGYAHHGKAQQAIEVLSK 604
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIA--EEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++++G AP+ +F ++ A S EE H L D K+ + + L+ Y
Sbjct: 605 LEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLD--KYKIKPKSEHYSCLVDAY-- 660
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKD--EPSWTTMIAGYV----RNDDLASARKLLD 241
A +L + + QKD E +W T+++ R SA K+++
Sbjct: 661 -------------GRAGRLEEAYQIVQKDGSESAWRTLLSACRNHSNRKIGEKSAMKMIE 707
Query: 242 GMTHPIAVAWNAMISG-YVRHGLYEEAFDTFRKMHSMGIQMD 282
+P A ++S Y+ G +EEA + +KM + ++ D
Sbjct: 708 --LNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKD 747
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 149/341 (43%), Gaps = 55/341 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T+L+ Y+ G A++L+ P +D I+ A++ +YS D +AV+ F++ +
Sbjct: 291 TSLVCLYAKQGFTNTAKQLYKYYPT--KDLITLTAIISSYSEKGDIESAVECFIQTIQLD 348
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD + VL ++ + C H VK G+
Sbjct: 349 IKPDAVALIGVLHGITNPSHFAIGCT-FHGYGVKSGL----------------------- 384
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ L+A+ +I+ Y R D++ +A L M + WN+M
Sbjct: 385 SNDCLVANG-------------------LISLYSRFDEIEAALSLFYDMREKPLITWNSM 425
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
ISG V+ G +A + F +M G + D T SL+S G G LH+Y+LR V
Sbjct: 426 ISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNV 485
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ E FI ALI Y+KCG+L A +VF + L +WNAI+SGY + LE F
Sbjct: 486 R-VEDFI---GTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGY-SLYGLEHTAF 540
Query: 375 -IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ ++ E+ L +T+ +++ G L+ FN M
Sbjct: 541 GCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIM 581
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 168/459 (36%), Gaps = 146/459 (31%)
Query: 17 PSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
PS AR I L G + LID+Y K +A ++FD+
Sbjct: 68 PSTAALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQ----------- 116
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
++ RD +S+N ++ YS N + A++LFV M R+ F
Sbjct: 117 ----------------------MSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 137 PDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
P+ + ++L G LI + + +H +K G + N L+S Y C
Sbjct: 155 PNQTTIVSLLPSCGCFELI----FQGRSIHGFGIKAGFGLDSHLNNALMSMYAKC----- 205
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
DDL +++ L D M V+WN
Sbjct: 206 -------------------------------------DDLEASQLLFDEMDEKSVVSWNT 228
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS-----FNTGLFNCGRQLHAY 308
MI Y ++GL+++A F++M G T +L+SA+ + + CG A
Sbjct: 229 MIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDAS 288
Query: 309 VLRTVV------------------QPSEHFILSVNNALITFYTKCGKLVQAREVF----- 345
V+ ++V P++ I A+I+ Y++ G + A E F
Sbjct: 289 VVTSLVCLYAKQGFTNTAKQLYKYYPTKDLI--TLTAIISSYSEKGDIESAVECFIQTIQ 346
Query: 346 -DKMP---------------------------------VRDLVSWNAILSGYINARRLEE 371
D P D + N ++S Y +E
Sbjct: 347 LDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEA 406
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
A +F ++ E+ L+TW MISG ++G ++++LF++M
Sbjct: 407 ALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEM 445
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 157/398 (39%), Gaps = 67/398 (16%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H +++ GF + L+ +Y K A L+ P D+ + T ++S+YS G+
Sbjct: 274 VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGD 333
Query: 87 VKLAEKLFNAT--------PVTL-----------------------------RDTISYNA 109
++ A + F T V L D + N
Sbjct: 334 IESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANG 393
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW 169
++ YS + AA+ LF M+ P S + G + A + +L ++
Sbjct: 394 LISLYSRFDEIEAALSLFYDMREK---PLITWNSMISGCVQ--AGKSSDAMELFSEMSMC 448
Query: 170 GVMCVPSVLNTLLSCYICCASSTL-----VESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
G + +LLS CC L + S +L + R ++ T +I
Sbjct: 449 GKKPDAITIASLLSG--CCQLGNLRIGETLHSYILRNNVRV----------EDFIGTALI 496
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
Y + L A K+ + P WNA+ISGY +GL AF + K+ G++ D+
Sbjct: 497 DMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKI 556
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAR 342
T+ +++A + GL G + + + + PS +H+ ++ K G +A
Sbjct: 557 TFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYA-----CIVALLGKEGLFKEAI 611
Query: 343 EVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREV 379
E +KM ++ D W A+L+ R ++ + + +++
Sbjct: 612 EFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKL 649
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 261 HGLYEEA----FDTFRKMHSMGIQMDEYTYTSLISASFNTGLF-NC-------GRQLHAY 308
H L++ A FR++ + +E+T++ LI A ++ F +C RQ+
Sbjct: 22 HSLFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQ 81
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
L+ V H V+ +LI Y K G AR +FD+M RD+VSWN ++ GY
Sbjct: 82 CLKRGVNQFIH----VHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGY 137
Query: 369 LEEAKFIFREVPERNLL-TWTVMISGLAESG 398
L A +F ++ N T ++S L G
Sbjct: 138 LYHAIQLFVDMLRENFKPNQTTIVSLLPSCG 168
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 127/288 (44%), Gaps = 46/288 (15%)
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
YN M++ YS + + A+ +F +++ G DPFSF V+ A E + + +H V
Sbjct: 77 YNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFG-RGVHGIV 135
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG 226
VK G + NT+L Y C + ARK+FDE P
Sbjct: 136 VKSGNRFFVDLNNTILQFYCVCGR---------IDDARKVFDECP--------------- 171
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
RND V+WN ++ G V Y FD F K GI+ T
Sbjct: 172 -ERND----------------LVSWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATT 214
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
SL+SA+ + G F G+ LH Y ++ + L+V ALI Y K G + AR+VFD
Sbjct: 215 LSLLSAAGDIGSFVLGKSLHGYCIKIGFCCN----LNVVTALIDMYAKTGCIYLARKVFD 270
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
+ +D+V WN ++ Y + +EEA + + + + + + + GL
Sbjct: 271 GVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGL 318
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 172/430 (40%), Gaps = 54/430 (12%)
Query: 20 TQTLARAIHAHILTTGFRLTPLIRNRLI--DIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
T T H +++ T P ++L+ I+ ++ YA +F NP++F T+
Sbjct: 25 TITEIHQFHCYMIKTSLTNVPFTLSKLLAASIF----DMNYASTIFTCIQNPNLFMYNTM 80
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLR--DTISYNAMVKAYSHNLD---GHAAVKLFVRMKR 132
L YS + + A +FN + D S+ A++KA + + G + V+
Sbjct: 81 LRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVHGIVVKSGN 140
Query: 133 DGFAP---DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI--- 186
F F V G + + C + + D+V W ++ VL + S
Sbjct: 141 RFFVDLNNTILQFYCVCGRIDDARKVFDECPERN-DLVSWNILMGGCVLVSDYSFVFDLF 199
Query: 187 ----CCASSTLVESPVLMASARKLFDEAPLSQK------------DEPSWTTMIAGYVRN 230
C V + + + SA L + + T +I Y +
Sbjct: 200 LKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKT 259
Query: 231 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
+ ARK+ DG+ V WN +I Y R L EEA + M G++ + T L+
Sbjct: 260 GCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLL 319
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
S +G R YV + + + + AL+ Y KCG L +A E+F++M
Sbjct: 320 SVYSASGSMQGVR----YVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMEN 375
Query: 351 RDLVSWNAILSGY------INA----RRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
+D+ SW A++SG+ INA R+E F N +T+ +++ + G
Sbjct: 376 KDVKSWTAVISGHGIHGQAINAISLFNRMENEGF------RPNEITFLAILTACSHGGLV 429
Query: 401 EESLKLFNQM 410
E ++ F +M
Sbjct: 430 TEGVEFFKRM 439
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 232 DLASARKLLDGMTH-PIAVAWNAMISGYVRHGL-YEEAFDTFRKMHSMGIQMDEYTYTSL 289
+L A KL D M + W ++I ++ H + TF +MH GI +T++ +
Sbjct: 62 NLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLV 121
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
++A G+Q+HA ++++ ++ V AL+ Y KCG + AR+VFD +
Sbjct: 122 LNACGRVPAGFEGKQVHARLVQSGFLGNK----IVQTALLDMYAKCGHVCDARDVFDGIV 177
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
RD+V+W A++ GY A R+ +A+F+F + ERN TWT M++G A G + +++L++
Sbjct: 178 DRDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDV 237
Query: 410 M 410
M
Sbjct: 238 M 238
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 185/446 (41%), Gaps = 77/446 (17%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDK-----TPNPDIFSRT--TLLSAYSA 83
I T+ F + PL N+ ++ S++ H LF K P+ F+R +L +
Sbjct: 3 ITTSTFSILPL--NQFLNNAKNISHLKQIHALFLKHLPQNAPH-HFFNRLLFRVLHFSAE 59
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAY-SHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
N+ A KLF+ P + + ++++A+ SH+ + F RM + G P F+F
Sbjct: 60 KSNLYYAHKLFDTMP-NCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTF 118
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS--------STLV 194
S VL A + + +Q+H +V+ G + V LL Y C +V
Sbjct: 119 SLVLNACGRVPAG-FEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIV 177
Query: 195 ESPVL--------------MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
+ V+ M AR LFD + +++ +WTTM+AGY D+ +A +L
Sbjct: 178 DRDVVAWTAMICGYAKAGRMVDARFLFDN--MGERNSFTWTTMVAGYANYGDMKAAMELY 235
Query: 241 DGMTHPIAVAWNAMISG--------------------------------YVRHGLYEEAF 268
D M V W AMI+G Y ++G EA
Sbjct: 236 DVMNGKDEVTWVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAI 295
Query: 269 DTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNAL 328
+ + KM I++ + ISA L Y + H V+NAL
Sbjct: 296 EMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSL-TYNIEEGFCEKTHI---VSNAL 351
Query: 329 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL---- 384
I +KCG + A F+ M RDL +++A+++ + + ++A +F ++ + L
Sbjct: 352 IHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQ 411
Query: 385 LTWTVMISGLAESGFGEESLKLFNQM 410
+T+ +++ + SG EE + F M
Sbjct: 412 VTFVGVLNACSTSGLIEEGCRFFQIM 437
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 163/392 (41%), Gaps = 62/392 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HA ++ +GF +++ L+D+Y K ++ A +FD + D+ + T ++ Y+
Sbjct: 134 GKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAK 193
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
AG + A LF+ + R++ ++ MV Y++ D AA++L+ M D ++
Sbjct: 194 AGRMVDARFLFD--NMGERNSFTWTTMVAGYANYGDMKAAMELYDVMN----GKDEVTWV 247
Query: 144 TVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY--------------- 185
++ G + ++E ++ V W PS LL+CY
Sbjct: 248 AMIAGYGKLGNVSEARRIFDEI---TVPWN----PSTCAALLACYAQNGHAREAIEMYEK 300
Query: 186 -------------ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
+ S+ + M+++ E +K +I + +
Sbjct: 301 MRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGN 360
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+ A + + M + ++AMI+ + HG ++A D F KM G++ ++ T+ +++A
Sbjct: 361 IDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNA 420
Query: 293 SFNTGLFNCGRQLHAYVLRTV-VQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
+GL G + + ++P EH+ ++ + G+L +A + +
Sbjct: 421 CSTSGLIEEGCRFFQIMTEMYGIEPLPEHY-----TCMVDLLGRAGQLEKAYSLIKENST 475
Query: 351 R-DLVSWNAILS----------GYINARRLEE 371
D +W ++L+ G I AR L E
Sbjct: 476 SADATTWGSLLAACRVYGNVELGEIAARHLFE 507
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 149/344 (43%), Gaps = 52/344 (15%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F T + Y G+ +A +F+ V ++ +S+ A++ ++N D A+ + M
Sbjct: 207 VFLSTAFVDFYFRCGDSLMARSVFDEMEV--KNEVSWTAVISGCANNQDYDVALACYREM 264
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+ +G +P+ + +L A + ++ +++H + G S L+ Y C
Sbjct: 265 QVEGVSPNRVTLIALLAACARPGFVKYG-KEIHGYAFRRGFDSCHSFSPALIYLYCECGQ 323
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
S L A ++ +G + V
Sbjct: 324 S-----------------------------------------LHLAERIFEGSSLRDVVL 342
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W+++I Y R G ++A F KM + + + T ++ISA N F G +H Y+L
Sbjct: 343 WSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYIL 402
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + F + V NALI Y KCG L +R++F +MP RD V+WN+++S Y E
Sbjct: 403 KFGIG----FSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGE 458
Query: 371 EAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+A F E+ ER + +T+ ++S +G E +LF Q+
Sbjct: 459 QALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQV 502
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
++I+ Y + D+ SAR++ D M H + WN+MI+ Y+++GL EA + + +G
Sbjct: 106 SIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLP 165
Query: 282 DEYTYTSLISA---SFNTGLFNCGRQLHAYVL---RTVVQPSEHFILSVNNALITFYTKC 335
S++S + G + GRQ+H V+ R +Q S + ++ A + FY +C
Sbjct: 166 KPELLASMVSMCGREMDLG-WRIGRQIHGLVVVDGRIRIQHS----VFLSTAFVDFYFRC 220
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMI 391
G + AR VFD+M V++ VSW A++SG N + + A +RE+ N +T ++
Sbjct: 221 GDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALL 280
Query: 392 SGLAESGF 399
+ A GF
Sbjct: 281 AACARPGF 288
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 137/352 (38%), Gaps = 86/352 (24%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H TG P++ N +I +Y K +I A +FD P+
Sbjct: 88 LHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPH------------------ 129
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
RDTI++N+M+ AY N A+++ GF P P ++++
Sbjct: 130 ---------------RDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMV 174
Query: 147 GAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVL---NTLLSCYICCASSTLVESPVLMAS 202
+ W +Q+H VV G + + + + Y C S +
Sbjct: 175 SMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLM--------- 225
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR +FDE + K+E SWT +I+G N D
Sbjct: 226 ARSVFDE--MEVKNEVSWTAVISGCANNQD------------------------------ 253
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
Y+ A +R+M G+ + T +L++A G G+++H Y R F
Sbjct: 254 -YDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSF-- 310
Query: 323 SVNNALITFYTKCGKLVQ-AREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+ ALI Y +CG+ + A +F+ +RD+V W++I+ Y ARR E K
Sbjct: 311 --SPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSY--ARRGESDK 358
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 59/330 (17%)
Query: 77 LLSAYSAAG-NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
L+ Y G ++ LAE++F + +LRD + +++++ +Y+ + A+KLF +M+ +
Sbjct: 314 LIYLYCECGQSLHLAERIFEGS--SLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEET 371
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
P+ + V+ A + ++ + H +H ++K+G+ V N L++ Y C S
Sbjct: 372 EPNYVTLLAVISACTNLSSFK-HGGVIHGYILKFGIGFSIFVCNALINMYAKCGS----- 425
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ +RK+F E P +D +V WN+MI
Sbjct: 426 ----LDDSRKIFLEMP--SRD-------------------------------SVTWNSMI 448
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
S Y HG E+A F +M G+++D T+ +++SA + GL G+QL V
Sbjct: 449 SAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEI 508
Query: 316 P--SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEEA 372
P EH+ LI + + GKL A E+ MP++ W++++S RL+ A
Sbjct: 509 PITIEHY-----ACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIA 563
Query: 373 KF----IFREVPERNLLTWTVMISGLAESG 398
+ + R P N ++T++ AE G
Sbjct: 564 ESLSSQLIRSEPN-NAASYTLLSMIHAEKG 592
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDE--YTYTSLISASFNTGLFNCGRQLH--AYVL 310
I V GLY + F ++H + + S+I A T G QLH A++
Sbjct: 36 IKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFIT 95
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ P V+N++I+ Y K + AR+VFD MP RD ++WN++++ Y+ L
Sbjct: 96 GSYTDPI------VSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLV 149
Query: 371 EAKFIFRE------VPERNLLTWTVMISG 393
EA + ++ +P+ LL V + G
Sbjct: 150 EALQMLKDFYFLGFLPKPELLASMVSMCG 178
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 56/318 (17%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N ++FS + LL Y+ G V A +F P + +S+N ++ YS D A L
Sbjct: 132 NENVFSGSALLDMYAKCGRVDDALVVFRYMPEC--NYVSWNTLIAGYSRVGDLDMAFWLM 189
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH--CQQLHCDVVKWGVMCVPSVLNTLLSCY 185
+ +G D + S +L +L+ ++ QLHC +VK G+ V N +++ Y
Sbjct: 190 RCQELEGVGIDDGTVSPLL---TLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAY 246
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C S + A ++F G V + R L
Sbjct: 247 SECCS---------LQDAERVF-----------------VGAVT----VTCRDL------ 270
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
V WN+M++ Y+ H AFD F +M S G + D+Y+YT +IS + G L
Sbjct: 271 ---VTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESL 327
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFY----TKCGKLVQAREVFDKMPVRDLVSWNAILS 361
H V++ + S + V+NALI Y +C + A +F M V+D +WN++L+
Sbjct: 328 HGLVIKRGAEVS----VPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTWNSVLA 381
Query: 362 GYINARRLEEAKFIFREV 379
GY+ R E+A +F +V
Sbjct: 382 GYVQVGRSEDALRLFVQV 399
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 153/340 (45%), Gaps = 63/340 (18%)
Query: 77 LLSAYSAAGNVKLAEKLF-NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+++AYS +++ AE++F A VT RD +++N+M+ AY + + A +F+ M+ GF
Sbjct: 242 IITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGF 301
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PD +S++ V+ S I E + + LH V+K G V N L++ Y+
Sbjct: 302 EPDDYSYTGVISGCS-IKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLG-------- 352
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
FD N + A ++ M WN+++
Sbjct: 353 -----------FD---------------------NRCMEDALRIFFSMDVKDCCTWNSVL 380
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+GYV+ G E+A F ++ S+ +++D+YT++++I + G+Q+H L+
Sbjct: 381 AGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFD 440
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+++ GK A++ F+ + + WN+I+ GY + A +
Sbjct: 441 TNKYV---------------GK--DAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALEL 483
Query: 376 FREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
F + E+ + +T+ +++ + +G EE K+ M+
Sbjct: 484 FYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSME 523
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 56/331 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+++ L++AYS + LA +LF+ P RDT+S+NA++ Y + D + +L
Sbjct: 33 DLYTSNNLITAYSKCAQLPLALQLFDKMPQ--RDTVSWNAVISGYVNTADLDSTWQLLNA 90
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G A D +F + L ++ E QQLH ++K
Sbjct: 91 MRVSGHAFDNHTFGSTLKGVARAQRLELG-QQLHSVMIK--------------------- 128
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
M +F + L M A R DD A + M V
Sbjct: 129 ----------MRLNENVFSGSAL--------LDMYAKCGRVDD---ALVVFRYMPECNYV 167
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN +I+GY R G + AF R G+ +D+ T + L++ ++ QLH +
Sbjct: 168 SWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKI 227
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF---DKMPVRDLVSWNAILSGYINA 366
++ E F + V NA+IT Y++C L A VF + RDLV+WN++L+ Y+
Sbjct: 228 VK---HGLEAFNI-VCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLH 283
Query: 367 RRLEEAKFIFREVP----ERNLLTWTVMISG 393
++ A +F E+ E + ++T +ISG
Sbjct: 284 KKENLAFDVFIEMQSFGFEPDDYSYTGVISG 314
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 143/328 (43%), Gaps = 56/328 (17%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA--AVKLFVR 129
F ++S YS G+++ A ++F+ P R +SYNA++ AYS + H A L+ +
Sbjct: 47 FLYNNIISMYSRCGSLEDAHQVFDKMPQ--RTHVSYNALLAAYSRVSEQHCVYAFNLYTQ 104
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G P + +++L A SL + LH +K+G + V +LL+ Y C
Sbjct: 105 MENMGLRPSNMTITSLLQAASLHGDLLIGLL-LHAKSLKFGFLNDICVQTSLLNMYSSCM 163
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
DL+SA + M V
Sbjct: 164 ------------------------------------------DLSSAESVFCDMNERDNV 181
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AWN++I GY+++ E+ F +M +G YT+ ++SA + GR +HA V
Sbjct: 182 AWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARV 241
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ V P H + NAL+ Y G A +F +M DLVSWN+++SGY
Sbjct: 242 IVGNVSPDLH----LQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDG 297
Query: 370 EEAKFIFREV-----PERNLLTWTVMIS 392
E+A +F ++ P+ + T+ +IS
Sbjct: 298 EKAMNLFVQLKALCFPKPDDYTYAGIIS 325
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 65/385 (16%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLA 90
IL+ RL RLI N+ +PD+ + L+ Y AG+ + A
Sbjct: 221 ILSACSRLKDYFSGRLIHARVIVGNV-----------SPDLHLQNALVDMYCNAGDTQTA 269
Query: 91 EKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF-APDPFSFSTVLGAM 149
+F + + D +S+N+M+ Y N DG A+ LFV++K F PD ++++ ++ A
Sbjct: 270 YMIF--SRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISAT 327
Query: 150 SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDE 209
+ + LH V+K G + V +TL+S Y + +A ++F
Sbjct: 328 GAFPCFSYG-KPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETE---------AALRVFCS 377
Query: 210 APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 269
P KD WT MI GY K+ DGM G +R
Sbjct: 378 IP--GKDAILWTEMITGY---------SKMADGM-------------GAIR--------- 404
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
F +MH ++D+Y + ++S + G +H Y + +SV+ +LI
Sbjct: 405 CFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVE----MSVSGSLI 460
Query: 330 TFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----L 385
Y K G L A VF ++ DL WN++L G+ + +++A +F E+ ++ L +
Sbjct: 461 DMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQV 520
Query: 386 TWTVMISGLAESGFGEESLKLFNQM 410
T+ ++S + S E+ L+N M
Sbjct: 521 TFLSLLSACSHSRLVEQGKLLWNYM 545
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 164/384 (42%), Gaps = 50/384 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R IHA ++ ++N L+D+YC + + A+ +F + D+ S +++S Y
Sbjct: 234 GRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFE 293
Query: 84 AGNVKLAEKLF---NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
+ + A LF A D +Y ++ A L ++ + GF F
Sbjct: 294 NEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVF 353
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHC-----DVVKW---------------GVMCVPS---- 176
ST++ +M +E ++ C D + W + C
Sbjct: 354 VGSTLV-SMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHE 412
Query: 177 -------VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
VL+ +LS +C + L + ++ A KL + +S ++I Y +
Sbjct: 413 VHEIDDYVLSGVLS--VCAYLAILRQGEIIHCYAYKLGYDVEMSVSG-----SLIDMYAK 465
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
N +L +A + ++HP WN+M+ G+ HG+ ++A F ++ G+ D+ T+ SL
Sbjct: 466 NGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSL 525
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+SA ++ L G+ L Y+ + P +H+ + ++T ++ L +A E+ +K
Sbjct: 526 LSACSHSRLVEQGKLLWNYMSSIGLVPGPKHY-----SCMVTLLSRAALLEEAEEIINKS 580
Query: 349 P-VRDLVS-WNAILSGYINARRLE 370
P V D V W +LS + + L+
Sbjct: 581 PYVEDNVELWRTLLSACVINKNLK 604
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 139/345 (40%), Gaps = 87/345 (25%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI +T+LL+ YS+ ++ AE +F + RD +++N+++ Y N V LF+
Sbjct: 148 DICVQTSLLNMYSSCMDLSSAESVF--CDMNERDNVAWNSLILGYLKNDKIEKGVYLFIE 205
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M GF P ++F +L A S + + Y
Sbjct: 206 MMWVGFTPTVYTFCMILSACSRLKD------------------------------YF--- 232
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S L+ + V++ + D ++ Y D +A + M V
Sbjct: 233 SGRLIHARVIVGNV----------SPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLV 282
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNC---GRQL 305
+WN+MISGY + E+A + F ++ ++ + D+YTY +ISA TG F C G+ L
Sbjct: 283 SWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISA---TGAFPCFSYGKPL 339
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H V++ VR + + ++S Y
Sbjct: 340 HGQVIKAGF-----------------------------------VRSVFVGSTLVSMYFK 364
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ E A +F +P ++ + WT MI+G ++ G +++ F++M
Sbjct: 365 NQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEM 409
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 62/293 (21%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH + G+ + + LID+Y K+ N+ A+ +F + +PD+ ++L +S G
Sbjct: 440 IHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGM 499
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
V A+KLF + + G PD +F ++L
Sbjct: 500 VD---------------------------------DALKLFEEIIKQGLVPDQVTFLSLL 526
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMC----VPSVLNTLLSCYICCASSTLVESPVLMAS 202
A S H + + + W M VP + SC + TL+ L+
Sbjct: 527 SACS-------HSRLVEQGKLLWNYMSSIGLVPGPKH--YSCMV-----TLLSRAALLEE 572
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA----SARKLL--DGMTHPIAVAWNAMIS 256
A ++ +++P + + W T+++ V N +L +A ++L + P + + +
Sbjct: 573 AEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNL-- 630
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
Y G ++E + R M G+ M++ S I A + +F+ G Q H V
Sbjct: 631 -YAAAGRWDEVAEIRRNMK--GLIMEKEPGLSWIEAKNDIHVFSSGDQSHPKV 680
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
RQLHA +L T NN +I+ Y++CG L A +VFDKMP R VS+NA+L+
Sbjct: 28 RQLHALLLTTTNASGSKSAFLYNN-IISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAA 86
Query: 363 Y 363
Y
Sbjct: 87 Y 87
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 53/357 (14%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LF D+F + L++ Y V A ++F PV RD + +N+MV Y+
Sbjct: 159 LFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPV--RDVVLWNSMVNGYAQIGCFE 216
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+ +F RM +G P ++ + VL S+I + + + Q +H + K G VLN L
Sbjct: 217 EALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFD-NGQAVHGFLTKMGYHSSVVVLNAL 275
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y C ++ A +F+ + +KD
Sbjct: 276 IDMYGKCKCAS---------DALNVFE--VMDEKD------------------------- 299
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+WN++IS + R G + F +M +Q D T T+++ A +
Sbjct: 300 ------MFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMH 353
Query: 302 GRQLHAYVLRTVV----QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
GR++H Y++ + + ++ + +NNAL+ Y KCG + AR VFD M +D+ SWN
Sbjct: 354 GREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWN 413
Query: 358 AILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+++GY +EA F + + L +++ ++S + +G +E L+ +M
Sbjct: 414 IMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEM 470
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 79/341 (23%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T + +H H+L GF +PL +I++Y K + I YA +F+ + D
Sbjct: 46 TKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHD----------- 94
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPF 140
++ +YNA++ + N + L+ +M+ G PD F
Sbjct: 95 --------------------KNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKF 134
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+F V+ A A + + +++H + K+G+ V + L++ Y+ L+
Sbjct: 135 TFPCVIRACG-DAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYL---------KFWLV 184
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A ++F+E P VR+ V WN+M++GY +
Sbjct: 185 VDAHEVFEELP----------------VRD-----------------VVLWNSMVNGYAQ 211
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
G +EEA FR+M G+ YT T ++S G F+ G+ +H ++ + H
Sbjct: 212 IGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKM----GYHS 267
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
+ V NALI Y KC A VF+ M +D+ SWN+I+S
Sbjct: 268 SVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIIS 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTH--PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
T++I Y + + A K+ + TH A+NA+I+G+V +GL + +F +++M +G
Sbjct: 68 TSIINMYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLG 127
Query: 279 IQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
+ + D++T+ +I A + G +++H + + ++ + V +AL+T Y K
Sbjct: 128 VVIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELD----VFVGSALVTTYLKFWL 183
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
+V A EVF+++PVRD+V WN++++GY EEA +FR + E ++ ++G+
Sbjct: 184 VVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGV 240
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 142/349 (40%), Gaps = 92/349 (26%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+A+H + G+ + ++ N LID+Y K A ++F+ D+FS
Sbjct: 253 GQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFS---------- 302
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+N+++ + D + +KLF RM + PD + +
Sbjct: 303 -----------------------WNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVT 339
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMC------VPSVL--NTLLSCYICCASSTLVE 195
TVL A + +A H +++H ++ G+ VL N L+ Y C S
Sbjct: 340 TVLPACTHLA-ALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGS----- 393
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
M AR +FD +++KD SW N MI
Sbjct: 394 ----MRDARMVFDN--MTEKDVASW-------------------------------NIMI 416
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV-LRTVV 314
+GY HG +EA DTF +M + +E ++ L+SA + G+ G + A + + V
Sbjct: 417 TGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGV 476
Query: 315 QPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
PS EH+ +I + GKLV+A ++ MP + D V W A+L+
Sbjct: 477 PPSVEHY-----TCVIDMLCRAGKLVEAYDLMLTMPFKADPVGWRALLA 520
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 149/360 (41%), Gaps = 80/360 (22%)
Query: 23 LARAIHAHILTTGF-RLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IHA IL GF T N LI++Y K + I + LFD + D S +++SAY
Sbjct: 59 LGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAY 118
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G ++F +L RM R G+A ++
Sbjct: 119 AKLGTKTSYGEVF------------------------------QLVYRMHRFGYAFSDYT 148
Query: 142 FSTVLGAMSLIAEEE-WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
S+VL A ++ ++ + +H +K G+ V LL Y A S + V
Sbjct: 149 LSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMY---AKSGCLRDAV-- 203
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
++F+ L K++ +NAMI+G++R
Sbjct: 204 ----RVFEGFDLKSKND-------------------------------FMYNAMIAGFLR 228
Query: 261 HGL----YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
GL EA F +M MG++ ++T++S++ A G F GRQ+H VL+ ++
Sbjct: 229 GGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEG 288
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
E V ++L+ Y+ G++ F+ P D+VSW + ++G + + E +F
Sbjct: 289 DEF----VASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLF 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 59/347 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN----LDGHAAVKLFVRM 130
T LL Y+ +G ++ A ++F + ++ YNAM+ + + AV++F M
Sbjct: 187 TALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEM 246
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+R G F+FS+V+ A + E +Q+H V+K N+L
Sbjct: 247 RRMGVKCSKFTFSSVVKACVGNGDFEVG-RQIHGQVLK----------NSL--------- 286
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ DE ++++ Y ++ + + V+
Sbjct: 287 -----------------------EGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVS 323
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W + I+G V++G +E F + + G ++DE+ +S++ A + G Q+ Y L
Sbjct: 324 WTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYAL 383
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN----- 365
+ V V N I Y K G + AR F + D+VSW+ ++ Y
Sbjct: 384 KFGVAD----FTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAK 439
Query: 366 -ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ RL E + VP N +T +++ + G +E L + MK
Sbjct: 440 ESLRLFELMTVSGIVP--NQITLLGVLTACSHGGLVDEGLGYYETMK 484
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 121/313 (38%), Gaps = 49/313 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F ++L+ YS G + + F TP D +S+ + + N + LF R
Sbjct: 289 DEFVASSLVDLYSFFGEIDDGLRCFEMTPKL--DVVSWTSAIAGCVKNGKFENGLSLFYR 346
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
DG D F S+V+GA + +A +Q+ +K+GV V NT + Y A
Sbjct: 347 FLADGRKLDEFIVSSVMGACADMAAARTG-EQIQGYALKFGVADFTVVKNTQICMY---A 402
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S ++ SAR F E + D SW+ MI
Sbjct: 403 KSGDID------SARNTFQET--EKPDVVSWSVMIC------------------------ 430
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
Y +HG +E+ F M GI ++ T +++A + GL + G + +
Sbjct: 431 -------SYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETM 483
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQA-REVFDKMPVRDLVSWNAILSGYINARR 368
+ + + + ++ + G+L +A R ++D D V W A+L +
Sbjct: 484 KKDYGMAAN---VKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKD 540
Query: 369 LEEAKFIFREVPE 381
E K I +V E
Sbjct: 541 TEMGKRIADKVIE 553
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 49/312 (15%)
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+ ++N ++++Y+ A++++V M R G PD ++ VL A+S + QQ+H
Sbjct: 62 SFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLG-QQVH 120
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+K G+ Q +E +
Sbjct: 121 SYGIKLGL------------------------------------------QSNEYCESGF 138
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I Y + D SA K+ D P +WNA+ISG + GL +A F M G + D
Sbjct: 139 INLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDG 198
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
T S++SA + G QLH YV + + +E ++ ++N+LI Y KCG++ A E
Sbjct: 199 ITMVSVMSACGSIGDLYLALQLHKYVFQA--KTNEWTVILMSNSLIDMYGKCGRMDLAYE 256
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGF 399
VF M R++ SW +++ GY +EA F + E N +T+ ++S G
Sbjct: 257 VFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGT 316
Query: 400 GEESLKLFNQMK 411
+E F+ MK
Sbjct: 317 VQEGRFYFDMMK 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 161/401 (40%), Gaps = 97/401 (24%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H++ + G + + I++YCK+ + AH +FD+ P + S L+S S
Sbjct: 115 LGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLS 174
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G ++ +A+V +FV MKR GF PD +
Sbjct: 175 QGG-------------------LAMDAIV--------------VFVDMKRHGFEPDGITM 201
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVK-----WGVMCVPSVLNTLLSCYICCASSTLVESP 197
+V+ A I + + QLH V + W V+ + N+L+ Y C L
Sbjct: 202 VSVMSACGSIG-DLYLALQLHKYVFQAKTNEWTVILMS---NSLIDMYGKCGRMDL---- 253
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
A ++F A + ++ SWT+MI GY AM
Sbjct: 254 -----AYEVF--ATMEDRNVSSWTSMIVGY-------------------------AM--- 278
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV--VQ 315
HG +EA F M G++ + T+ ++SA + G GR + +++ + +
Sbjct: 279 ---HGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGR-FYFDMMKNIYGIT 334
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAK 373
P +H+ ++ + G AR + ++MP++ + V W ++ ++ A+
Sbjct: 335 PQLQHY-----GCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAE 389
Query: 374 FI---FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ + + N + V+ + A G +E ++ + MK
Sbjct: 390 WVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMK 430
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
++P + WN +I Y R + A + M G+ D YT ++ A + G+
Sbjct: 58 SNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQ 117
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
Q+H+Y ++ +Q +E+ + I Y K G A +VFD+ L SWNA++SG
Sbjct: 118 QVHSYGIKLGLQSNEY----CESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGL 173
Query: 364 INARRLEEAKFIF 376
+A +F
Sbjct: 174 SQGGLAMDAIVVF 186
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 176/425 (41%), Gaps = 79/425 (18%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSS----NIPY 58
+++ + L+ L++ + T + IH H+ TG P +L+ + C S + Y
Sbjct: 5 NKSCEEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLL-LNCAVSISDHVLNY 63
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
+ LF PNPD F YN ++++ SH+
Sbjct: 64 SLRLFHHFPNPDTFM---------------------------------YNTLIRSLSHSS 90
Query: 119 DGHAAVKLFVRMKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
++++ F+++ R PD FSF+ L ++ + QLH + G V
Sbjct: 91 TPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFV 150
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR-------N 230
TL+S Y C ARK+FDE +SQ + +W ++ R
Sbjct: 151 GTTLISMYAECGCYEY---------ARKVFDE--MSQPNVVAWNAVVTACFRCGMWRVLG 199
Query: 231 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
+ M +W+ MI G+ + G + +AF F+++ + E + T ++
Sbjct: 200 VSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVL 259
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
SA G F G+ LH ++ + I+SVNNALI Y+KCG + A+ VF
Sbjct: 260 SACAQAGAFEFGKILHGFMEKAGFLC----IVSVNNALIDTYSKCGNVDMAKLVF----- 310
Query: 351 RDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKL 406
N L+ + R +EA +F E+ E + +T+ ++ + SG E+ L
Sbjct: 311 ------NISLAMH---GRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCAL 361
Query: 407 FNQMK 411
F++M+
Sbjct: 362 FSKMR 366
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 149/360 (41%), Gaps = 80/360 (22%)
Query: 23 LARAIHAHILTTGF-RLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IHA IL GF T N LI++Y K + I + LFD + D S +++SAY
Sbjct: 59 LGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAY 118
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G ++F +L RM R G+A ++
Sbjct: 119 AKLGTKTSYGEVF------------------------------QLVYRMHRFGYAFSDYT 148
Query: 142 FSTVLGAMSLIAEEE-WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
S+VL A ++ ++ + +H +K G+ V LL Y A S + V
Sbjct: 149 LSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMY---AKSGCLRDAV-- 203
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
++F+ L K++ +NAMI+G++R
Sbjct: 204 ----RVFEGFDLKSKND-------------------------------FMYNAMIAGFLR 228
Query: 261 HGL----YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
GL EA F +M MG++ ++T++S++ A G F GRQ+H VL+ ++
Sbjct: 229 GGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEG 288
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
E V ++L+ Y+ G++ F+ P D+VSW + ++G + + E +F
Sbjct: 289 DEF----VASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLF 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 59/347 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN----LDGHAAVKLFVRM 130
T LL Y+ +G ++ A ++F + ++ YNAM+ + + AV++F M
Sbjct: 187 TALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEM 246
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+R G F+FS+V+ A + E +Q+H V+K N+L
Sbjct: 247 RRMGVKCSKFTFSSVVKACVGNGDFEVG-RQIHGQVLK----------NSL--------- 286
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ DE ++++ Y ++ + + V+
Sbjct: 287 -----------------------EGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVS 323
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W + I+G V++G +E F + + G ++DE+ +S++ A + G Q+ Y L
Sbjct: 324 WTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYAL 383
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN----- 365
+ V V N I Y K G + AR F + D+VSW+ ++ Y
Sbjct: 384 KFGVAD----FTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAK 439
Query: 366 -ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ RL E + VP N +T +++ + G +E L + MK
Sbjct: 440 ESLRLFELMTVSGIVP--NQITLLGVLTACSHGGLVDEGLGYYETMK 484
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 121/313 (38%), Gaps = 49/313 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F ++L+ YS G + + F TP D +S+ + + N + LF R
Sbjct: 289 DEFVASSLVDLYSFFGEIDDGLRCFEMTPKL--DVVSWTSAIAGCVKNGKFENGLSLFYR 346
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
DG D F S+V+GA + +A +Q+ +K+GV V NT + Y A
Sbjct: 347 FLADGRKLDEFIVSSVMGACADMAAARTG-EQIQGYALKFGVADFTVVKNTQICMY---A 402
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S ++ SAR F E + D SW+ MI
Sbjct: 403 KSGDID------SARNTFQET--EKPDVVSWSVMIC------------------------ 430
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
Y +HG +E+ F M GI ++ T +++A + GL + G + +
Sbjct: 431 -------SYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETM 483
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQA-REVFDKMPVRDLVSWNAILSGYINARR 368
+ + + + ++ + G+L +A R ++D D V W A+L +
Sbjct: 484 KKDYGMAAN---VKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKD 540
Query: 369 LEEAKFIFREVPE 381
E K I +V E
Sbjct: 541 TEMGKRIADKVIE 553
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y ++ L +A+ L + + + AWNAMI+GYV+ GL E +TF +M ++ D+YT+
Sbjct: 99 YAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTF 158
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
S+ A L GRQ H +L+ + + + VN+ALI Y KC + R +FD
Sbjct: 159 ASVFRACATLALLEPGRQAHGVMLKCQIGDN----VVVNSALIDMYFKCSCICDGRLLFD 214
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIF-REVPER---NLLTWTVMISGLAESGFGEE 402
K R+ ++W ++SGY ++ E F R + E N +T+ ++ + G +E
Sbjct: 215 KCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDE 274
Query: 403 SLKLFNQM 410
+ K F M
Sbjct: 275 AYKYFQSM 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 147/342 (42%), Gaps = 60/342 (17%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P+ + + LL Y+ +G ++ A+ LFN + +D+ ++NAM+ Y ++ F
Sbjct: 87 PNEYLKIKLLILYAKSGCLETAQFLFN--NLVEKDSFAWNAMIAGYVQKGLEEVGLETFY 144
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M++ PD ++F++V A + +A E +Q H ++K + V + L+ Y C
Sbjct: 145 EMRQASLRPDQYTFASVFRACATLALLE-PGRQAHGVMLKCQIGDNVVVNSALIDMYFKC 203
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ + R LFD+ ++ +WTT
Sbjct: 204 SC---------ICDGRLLFDKCL--SRNTITWTT-------------------------- 226
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+ISGY +HG E D+F +M S + + T+ +++ A + GL + +
Sbjct: 227 -----LISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQS 281
Query: 309 VLR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILS---- 361
++R +V ++H+ A++ + GKL +A E K P ++ V W A+L
Sbjct: 282 MIRDYEMVPHAKHYA-----AMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKI 336
Query: 362 -GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
G ++ ++ K+ E N + V+ + A SG ++
Sbjct: 337 HGDLDLLKIASKKYF--EFERVNTGKYVVLANAYASSGLWDD 376
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 168/427 (39%), Gaps = 106/427 (24%)
Query: 14 LNHPSATQTLA---------RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD 64
NHP+ QTL + IH I+TTG + LI I K N+PYA +F+
Sbjct: 147 FNHPT-LQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKISSKF-NLPYAFKIFN 204
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
NP IF TL+S+ L N T + N + H A
Sbjct: 205 YISNPTIFLYNTLISS------------LINQT--------NQNQI----------HLAF 234
Query: 125 KLFVR-MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
L+ + + P+ F+F ++ A
Sbjct: 235 SLYNKILTNKNLQPNSFTFPSLFKA----------------------------------- 259
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
CC++ + L+ + F + P D +++ Y + + +R + D +
Sbjct: 260 ---CCSNQSWFHYGPLLHTHVLKFLQPPF---DNFVQASLLNFYAKYGKMCVSRYIFDRI 313
Query: 244 THPIAVAWNAMISGYVRHGLYE-------------EAFDTFRKMHSMGIQMDEYTYTSLI 290
P WN +++ Y R Y E+ FR M +GI+ +E T +LI
Sbjct: 314 NEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALI 373
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
SA N G + G +H +VLR ++ + V A + Y+KCG L A +VFDKMP
Sbjct: 374 SACSNLGAVSQGFWVHCFVLRNKIKMNRF----VGTAFVDMYSKCGCLNLACQVFDKMPE 429
Query: 351 --RDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESL 404
RD + A++ G+ +A ++R++ + L+ T+ V + + G EE L
Sbjct: 430 NDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGL 489
Query: 405 KLFNQMK 411
++F MK
Sbjct: 490 EIFKSMK 496
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 132/345 (38%), Gaps = 80/345 (23%)
Query: 27 IHAHILTTGFRLTPL---IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+H H+L F P ++ L++ Y K + + ++FD+ PD+ + +L+AY+
Sbjct: 273 LHTHVLK--FLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYAR 330
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+ + F+ +L ++ LF M+ G P+ +
Sbjct: 331 SSSYHSYSNSFDDADFSLE--------------------SLYLFRDMQVIGIRPNEVTIV 370
Query: 144 TVLGAMS---LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
++ A S +++ W +HC V++ + V + Y C L
Sbjct: 371 ALISACSNLGAVSQGFW----VHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNL------- 419
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A ++FD+ P + +D +T AMI G+
Sbjct: 420 --ACQVFDKMPENDRDSFCYT-------------------------------AMIGGFAV 446
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPS-E 318
HG +A + +RKM G+ D T+ + A + GL G ++ + V+P E
Sbjct: 447 HGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLE 506
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
H+ LI + G+L +A E MP++ + V W ++L
Sbjct: 507 HY-----GCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGA 546
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 161/382 (42%), Gaps = 44/382 (11%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H++++ G + L+++Y K + H LFD+ D +LS YS
Sbjct: 61 LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 83 AAG-NVKLAEKLFNAT-------PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+G N K+F A P ++ TI+ V A S NL+G +V +V + G
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSV--TIATVLPVCARSGNLNGGKSVHGYV--IKSG 176
Query: 135 FAPDPFSFSTVL---GAMSLIAEEEWHC--QQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
F D F+ + ++ L+A + + +H DVV W M N LL
Sbjct: 177 FEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLF 236
Query: 190 SSTLVES--PVLMASARKL-----FDEA----------------PLSQKDEPSWTTMIAG 226
S + S P A L FDE P D +++
Sbjct: 237 SLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSF 296
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYT 285
Y++ A L M V+WN +I+GY +G + ++ F + S+ + +D T
Sbjct: 297 YLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVT 356
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
S++ A G+Q+HAY+LR P S NAL++FY KCG + +A F
Sbjct: 357 MVSILPACAQLDNLQAGKQVHAYILR---HPFLFEDTSAGNALVSFYAKCGYIEEAYHTF 413
Query: 346 DKMPVRDLVSWNAILSGYINAR 367
+ +DL+SWN+IL + R
Sbjct: 414 SMISRKDLISWNSILDAFGEKR 435
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 185/423 (43%), Gaps = 67/423 (15%)
Query: 1 MDSRTMANLF--LAQLNHPSATQTLARAIHAHILTTGFRLTPL-IRNRLIDIYCKSSNIP 57
+DS TM ++ AQL++ A + +HA+IL F N L+ Y K I
Sbjct: 352 LDSVTMVSILPACAQLDNLQA----GKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIE 407
Query: 58 YAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
A+H F D+ S ++L A+ EK ++ ++L
Sbjct: 408 EAYHTFSMISRKDLISWNSILDAF--------GEKRHHSRFLSLL--------------- 444
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLG-AMSLIAEEEWHCQQLHCDVVKWG-VMCV- 174
H +KL +R PD + T++ SL+ ++ +++H ++ G ++C
Sbjct: 445 ---HVMLKLDIR-------PDSVTILTIIHFCASLLRVKK--VKEIHGYSIRSGSLLCAT 492
Query: 175 -PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK-DEPSWTTMIAGYVRNDD 232
P+V N +L Y C + + A K+F LS+K + + ++I+GYV
Sbjct: 493 APTVGNAILDAYSKCGN---------IEYANKMFQN--LSEKRNLVTCNSLISGYVGLGS 541
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
A + GM+ WN M+ Y + E+A + F K+ + G++ D T SLI
Sbjct: 542 HYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPV 601
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
+ RQ H Y++R+ + L + L+ Y KCG + A ++F +D
Sbjct: 602 CTQMASVHLLRQCHGYIIRSSFED-----LHLKGTLLDAYAKCGIIGYAYKIFQSSVDKD 656
Query: 353 LVSWNAILSGY----INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFN 408
LV + A++ GY ++ + LE + + + + +T ++S + +G E LK+F+
Sbjct: 657 LVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFD 716
Query: 409 QMK 411
++
Sbjct: 717 SIE 719
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 74/366 (20%)
Query: 25 RAIHAHILTTGFRL---TPLIRNRLIDIYCKSSNIPYAHHLFDK-TPNPDIFSRTTLLSA 80
+ IH + + +G L P + N ++D Y K NI YA+ +F + ++ + +L+S
Sbjct: 476 KEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISG 535
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y G+ A +F+ T D ++N MV+ Y+ N A++LF++++ G PD
Sbjct: 536 YVGLGSHYDANMIFSGMSET--DLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPD-- 591
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC--YICCASSTLVESPV 198
V+ MSLI C Q+ + ++ L C YI
Sbjct: 592 ----VVTIMSLIPV----CTQM-------------ASVHLLRQCHGYI------------ 618
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
R F++ L T++ Y + + A K+ V + AMI GY
Sbjct: 619 ----IRSSFEDLHLK-------GTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGY 667
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG-------LFNCGRQLHAYVLR 311
HG+ E+A +TF M +MGI+ D +TS++SA + G +F+ ++H
Sbjct: 668 AMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHG---- 723
Query: 312 TVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRL 369
++P+ E F V+ + G + +A K+P+ + W +L +
Sbjct: 724 --MKPTIEQFACVVD-----LLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEV 776
Query: 370 EEAKFI 375
E + +
Sbjct: 777 ELGRIV 782
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE-EAFDTFRKMHSMGIQM-DEY 284
Y + L KL D V WN ++SGY R G + + FR MHS G M
Sbjct: 88 YAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSV 147
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV-QARE 343
T +++ +G N G+ +H YV+++ + NAL++ Y KCG + A
Sbjct: 148 TIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTF----AGNALVSMYAKCGLVACDAYA 203
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
VFD + +D+VSWNA+++G L+EA +F
Sbjct: 204 VFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLF 236
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 56/337 (16%)
Query: 52 KSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMV 111
K+ + A +F+K P+P + T LL AY+ N+ A LFN P +DTIS+N+++
Sbjct: 42 KNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVI 101
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL-GAMSLIAEEEWHCQQLHCDVVKWG 170
KA D AVKLF M + + S++T++ G +S E
Sbjct: 102 KASIICNDFVTAVKLFDEMPQ----RNSISWTTIIHGFLSTGRVNE-------------- 143
Query: 171 VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRN 230
A + F+ P KD +W M+ GY N
Sbjct: 144 --------------------------------AERFFNAMPYVDKDVATWNAMVNGYCNN 171
Query: 231 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSL 289
+ A +L M ++W ++I G R+G +A F+ M G+ + T
Sbjct: 172 GRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCG 231
Query: 290 ISASFNTGLFNCGRQLHAYVLR-TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+SA+ F G Q+H + + + F V+ +L+TFY C ++ A +VF +
Sbjct: 232 LSAAAKILDFYAGIQIHCCMFKFGFCCGLDEF---VSASLVTFYASCKRMGDACKVFGET 288
Query: 349 PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
+++V W A+L+G + EA +F E+ N++
Sbjct: 289 VCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVV 325
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 79/384 (20%)
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
A LFD+ P + S TT++ + + G V AE+ FNA P +D ++NAMV Y +N
Sbjct: 113 AVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNG 172
Query: 119 DGHAAVKLFVRM-KRD----------------------------GFAPDPFSFSTVLGAM 149
+ A++LF +M RD GF+ S +T++ +
Sbjct: 173 RVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGL 232
Query: 150 SLIAE--EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLF 207
S A+ + + Q+HC + K+G C L ++ + T S M A K+F
Sbjct: 233 SAAAKILDFYAGIQIHCCMFKFGFCCG-------LDEFVSASLVTFYASCKRMGDACKVF 285
Query: 208 DEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEA 267
E K+ WT ++ G ND + EA
Sbjct: 286 GETVC--KNVVVWTALLTGCGLNDK-------------------------------HVEA 312
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
+ F +M + +E ++TS +++ GR +HA ++ ++ + + N+
Sbjct: 313 LEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVY----TGNS 368
Query: 328 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY----INARRLEEAKFIFREVPERN 383
L+ Y+KCG + A VF + +++VSWN+++ G L K + RE E +
Sbjct: 369 LVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESD 428
Query: 384 LLTWTVMISGLAESGFGEESLKLF 407
+T T ++S + SG +++ F
Sbjct: 429 EITLTGLLSACSRSGMLQKARCFF 452
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
+++N L SAR + + + P + ++ Y + EA + F ++ S D ++
Sbjct: 40 HLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSN--TKDTISW 97
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
S+I AS F +L + P + I +I + G++ +A F+
Sbjct: 98 NSVIKASIICNDFVTAVKLFDEM------PQRNSISWT--TIIHGFLSTGRVNEAERFFN 149
Query: 347 KMPV--RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
MP +D+ +WNA+++GY N R+ +A +F ++P R++++WT +I GL +G ++L
Sbjct: 150 AMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQAL 209
Query: 405 KLFNQM 410
F M
Sbjct: 210 FFFKNM 215
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 53/295 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F +L++ Y++ + A K+F T ++ + + A++ N A+++F
Sbjct: 261 DEFVSASLVTFYASCKRMGDACKVFGET--VCKNVVVWTALLTGCGLNDKHVEALEVFSE 318
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R P+ SF++ L + C
Sbjct: 319 MMRFNVVPNESSFTSALNS--------------------------------------CVG 340
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L + V+ A+ K+ E + + +++ Y + + A + G+ V
Sbjct: 341 LEDLEKGRVIHAAGIKMGLENAVYTGN-----SLVVMYSKCGFIGDALCVFKGICEKNVV 395
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN++I G +HG A F++M G++ DE T T L+SA +G+ R Y
Sbjct: 396 SWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYF 455
Query: 310 L--RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
R++ EH+ ++ +CG++ +A + MPV + + W +LS
Sbjct: 456 ARKRSMKLTVEHYA-----CMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLS 505
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 145/351 (41%), Gaps = 72/351 (20%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
++ + IH HI G + +L+ +Y ++ A LFD+ P+ S Y
Sbjct: 128 SIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDES--------SVY 179
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+NA LR T+ + K Y +D VK + +M+ G + +S
Sbjct: 180 P-----------WNA---LLRGTVVFGGRKKQY---ID---VVKTYSKMRELGVELNVYS 219
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
FS+V+ + + A + + H ++K G++ + L+ Y C L
Sbjct: 220 FSSVIKSFA-AAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKL-------- 270
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
AR++F+E P ++D W TM++G+ N
Sbjct: 271 -ARRVFEEIPERERDVVVWGTMLSGFSHNR------------------------------ 299
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
L E + + M GI + T ++ G+++HA+VL+T +
Sbjct: 300 -LQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEK--- 355
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
+ V +ALI Y KCG L AR VF P R++V W A++SGY + RLE+A
Sbjct: 356 VPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQA 406
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 50/306 (16%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
RT L+ Y G VKLA ++F P RD + + M+ +SHN ++ M +
Sbjct: 255 RTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEE 314
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC--VPSVLNTLLSCYICCASS 191
G P+ + VL + + + Q++H V+K VP V + L+ Y C
Sbjct: 315 GIYPNSVIMTIVLPVIGEVCKRRLG-QEVHAFVLKTKSYAEKVP-VQSALIDMYCKCGD- 371
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
++SAR +F +P +++ WT
Sbjct: 372 --------LSSARAVFYSSP--ERNVVCWT------------------------------ 391
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
A++SGY G E+A M G + D T +++ G+Q+HAY L+
Sbjct: 392 -ALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALK 450
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
P+ +S++++L+ Y+KCG + + +F M R+++SW A++ YI L E
Sbjct: 451 HWFLPN----VSLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYE 506
Query: 372 AKFIFR 377
A + R
Sbjct: 507 ALGVIR 512
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 156/393 (39%), Gaps = 85/393 (21%)
Query: 23 LARAIHAHILTT-GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + +HA +L T + +++ LID+YCK ++ A +F +P ++ T L+S Y
Sbjct: 338 LGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGY 397
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
++ G ++ A++ + M+++GF PD +
Sbjct: 398 ASVGRLE---------------------------------QALRAVIWMQQEGFRPDVVT 424
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+TVL + + E +Q+H +K + S+ ++L+ Y C V+
Sbjct: 425 VATVLPICAQLRALE-QGKQIHAYALKHWFLPNVSLSSSLVVMYSKCG--------VVEY 475
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
S R L M ++W AMI Y+ +
Sbjct: 476 STR----------------------------------LFGDMEQRNVISWTAMIDSYIEN 501
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EA R M + D + ++S L G+++H +L+ S HF
Sbjct: 502 GHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFT-SVHF- 559
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
V+ LI Y G + +A VF +PV+ ++W A++ Y + A +F ++
Sbjct: 560 --VSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRAYEYNELYQGAIDLFDQMRS 617
Query: 382 R----NLLTWTVMISGLAESGFGEESLKLFNQM 410
N T+ V++S +GF ++ K+FN M
Sbjct: 618 DRFSPNPFTFEVILSVCERAGFVNDASKIFNLM 650
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAV-AWNAMISGYV----RHGLYEEAFDTFRKMH 275
T ++ Y L A KL D + +V WNA++ G V R Y + T+ KM
Sbjct: 150 TKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMR 209
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+G++++ Y+++S+I + F G + HA +++ + S+ + LI Y KC
Sbjct: 210 ELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSD----ILRTCLIDLYFKC 265
Query: 336 GKLVQAREVFDKMP--VRDLVSWNAILSGYINARR----LEEAKFIFREVPERNLLTWTV 389
GK+ AR VF+++P RD+V W +LSG+ + R LE K++ E N + T+
Sbjct: 266 GKVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTI 325
Query: 390 MISGLAE 396
++ + E
Sbjct: 326 VLPVIGE 332
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
+PI++ + I + R EA + GI ++ T++SLI+A T + G+Q
Sbjct: 75 NPISIYKD--IKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQ 132
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV-SWNAILSGY 363
+H ++ R F+L+ L+ YT CG L A ++FD++P V WNA+L G
Sbjct: 133 IHTHI-RINGLEKNTFLLT---KLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGT 188
Query: 364 I 364
+
Sbjct: 189 V 189
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 55/342 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T LLS Y+ ++K A +F P +D + +N M+ YS + +++L M R G
Sbjct: 256 TALLSMYAKLDSLKDARLMFEKMPE--KDVVVWNIMISVYSGSGCPKESLELVYCMVRSG 313
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD F+ + +++ + EW +QLH V++ G SV N+L+ Y CA
Sbjct: 314 IRPDMFTAIPAISSITKLKSIEWG-KQLHAQVIRNGSDYQVSVHNSLVDMYSTCAD---- 368
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ SARK+F + + SW+ MI GY +D+
Sbjct: 369 -----LNSARKIF--GLIKDRTVVSWSAMIKGYAMHDNCL-------------------- 401
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
EA F +M G ++D +++ A G + LH Y L+T +
Sbjct: 402 -----------EALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNL 450
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVF--DKMPVRDLVSWNAILSGYINARRLEEA 372
+ S+ +L+ Y KCG + AR++F +K ++D+V+WN++++ Y N +
Sbjct: 451 DS----LKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQC 506
Query: 373 KFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
++ ++ + + +T+ M++ SG ++ ++F +M
Sbjct: 507 FELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEM 548
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 131/350 (37%), Gaps = 84/350 (24%)
Query: 14 LNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
LN + Q L + IHA G + ++LID Y + ++H +F T NP
Sbjct: 28 LNLCTKPQYLQQ-IHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENP---- 82
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
D+I YNA ++ + + L+ M +
Sbjct: 83 -----------------------------DSIIYNAFLRNLFMFGEYEKTLFLYKEMVQK 113
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
PD +VL ++ + E+ H VVK G+ V NTL+ Y + L
Sbjct: 114 SMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDAFDLVGNTLIELYGFLNGNGL 173
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
VE RK + + WN
Sbjct: 174 VE-----------------------------------------RKSVTKLNF-----WNN 187
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+I G E+F+ F +M + +Q + T +L+ A+ + G+ LH+ V+ +
Sbjct: 188 LIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASN 247
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+ L+VN AL++ Y K L AR +F+KMP +D+V WN ++S Y
Sbjct: 248 LCKE----LTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVY 293
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+T+LL++Y+ G +++A KLFN +L+D +++N+M+ AYS++ + +L+ ++K
Sbjct: 457 KTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLS 516
Query: 134 GFAPDPFSFSTVLGA 148
PD +F +L A
Sbjct: 517 IVKPDHVTFLGMLTA 531
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 86/400 (21%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S++ ++ R IHAH++ + I ++L+ Y K A+ LFD+ P D S +L
Sbjct: 58 SSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSL 117
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FA 136
+S + G +L E L +F +MK D
Sbjct: 118 VSGLAKIG--QLGECL-------------------------------SVFCKMKSDSELK 144
Query: 137 PDPFSFSTVLGA-MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
+ F+F +V+ A +S A +E + +HC +K G++ V+N L++ Y VE
Sbjct: 145 LNEFTFLSVISACVSEKACDEGY--YVHCCAMKLGLVYEVKVVNALVNMY---GKFGFVE 199
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
S A +LF E P S+K V+WN+++
Sbjct: 200 S------AFRLFSEMPESEKS-------------------------------IVSWNSIV 222
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+ ++G+ EAF+ F M G D+ T SL+ A N L LH + +
Sbjct: 223 AVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLD 282
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKF 374
+ L++ L+ Y+K G+L +R+VF+++ D V+W A+L+GY ++ E +F
Sbjct: 283 EN----LTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEF 338
Query: 375 IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
R V E + +T+T ++S + SG +E F M
Sbjct: 339 FERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVM 378
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 60/305 (19%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ Y G V+ A +LF+ P + + +S+N++V + N + A F M+ +GF
Sbjct: 188 LVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFF 247
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD + ++L A C+ G M V + + +C L E+
Sbjct: 248 PDDATMVSLLQA---------------CENFPLGRM-VEVLHGVIFTC-------GLDEN 284
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
++ TT++ Y + L ++RK+ + ++ P VAW AM++
Sbjct: 285 LTIV--------------------TTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLA 324
Query: 257 GYVRHGLYEEAFDTF-RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-- 313
GY HG +EA + F R + G++ D T+T L+SA ++GL G+ Y R +
Sbjct: 325 GYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGK----YFFRVMSD 380
Query: 314 ---VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARR 368
VQP +H+ + ++ +CG L A E+ MP + W A+L R
Sbjct: 381 VYKVQPRLDHY-----SCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRN 435
Query: 369 LEEAK 373
++ K
Sbjct: 436 IDLGK 440
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 174/441 (39%), Gaps = 79/441 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH + + + LID+Y K + A +F + P PD+ T+++S Y
Sbjct: 125 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 184
Query: 83 AAGNVKLAEKLFN---------ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+G+ +LA F+ PVTL S A + + H VK R D
Sbjct: 185 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK---RKGLD 241
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVLNTLLSCYICCASST 192
S + G I +++ D++ W M + C +
Sbjct: 242 NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM-------------VACYADN 288
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIA--------------------------- 225
E+ VL LF+E L ++ +P+W T+++
Sbjct: 289 GAETDVL-----DLFNEM-LDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 226 -----------GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
Y++ A L + M +AW + SGY +G+ E+ FR M
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 402
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
S G + D +++ G+ LHA+V++ + ++ + +LI Y K
Sbjct: 403 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQF----IGASLIEVYAK 458
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTV 389
C + A +VF M +D+V+W++I++ Y + EEA +F ++ N +T+
Sbjct: 459 CSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFIS 518
Query: 390 MISGLAESGFGEESLKLFNQM 410
++S + SG +E + +F+ M
Sbjct: 519 ILSACSHSGLIKEGINMFDIM 539
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH---SMGIQMDE 283
Y R + A KL H WNA++ Y G + E FR+M+ S+ I+
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 284 YTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
Y+ I+ GL G+ +H + L+ V + F V +ALI YTKCG++ A
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGF-LKKVRIDGDMF---VGSALIDLYTKCGQMNDA 161
Query: 342 REVFDKMPVRDLVSWNAILSGY 363
+VF + P D+V W +I+SGY
Sbjct: 162 VKVFMEYPKPDVVLWTSIISGY 183
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 174/441 (39%), Gaps = 79/441 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH + + + LID+Y K + A +F + P PD+ T+++S Y
Sbjct: 125 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 184
Query: 83 AAGNVKLAEKLFN---------ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+G+ +LA F+ PVTL S A + + H VK R D
Sbjct: 185 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK---RKGLD 241
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVLNTLLSCYICCASST 192
S + G I +++ D++ W M + C +
Sbjct: 242 NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM-------------VACYADN 288
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIA--------------------------- 225
E+ VL LF+E L ++ +P+W T+++
Sbjct: 289 GAETDVL-----DLFNEM-LDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 226 -----------GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
Y++ A L + M +AW + SGY +G+ E+ FR M
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 402
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
S G + D +++ G+ LHA+V++ + ++ + +LI Y K
Sbjct: 403 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQF----IGASLIEVYAK 458
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTV 389
C + A +VF M +D+V+W++I++ Y + EEA +F ++ N +T+
Sbjct: 459 CSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFIS 518
Query: 390 MISGLAESGFGEESLKLFNQM 410
++S + SG +E + +F+ M
Sbjct: 519 ILSACSHSGLIKEGINMFDIM 539
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH---SMGIQMDE 283
Y R + A KL H WNA++ Y G + E FR+M+ S+ I+
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 284 YTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
Y+ I+ GL G+ +H + L+ V + F V +ALI YTKCG++ A
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGF-LKKVRIDGDMF---VGSALIDLYTKCGQMNDA 161
Query: 342 REVFDKMPVRDLVSWNAILSGY 363
+VF + P D+V W +I+SGY
Sbjct: 162 VKVFMEYPKPDVVLWTSIISGY 183
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 174/441 (39%), Gaps = 79/441 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH + + + LID+Y K + A +F + P PD+ T+++S Y
Sbjct: 95 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 154
Query: 83 AAGNVKLAEKLFN---------ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+G+ +LA F+ PVTL S A + + H VK R D
Sbjct: 155 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK---RKGLD 211
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVLNTLLSCYICCASST 192
S + G I +++ D++ W M + C +
Sbjct: 212 NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM-------------VACYADN 258
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIA--------------------------- 225
E+ VL LF+E L ++ +P+W T+++
Sbjct: 259 GAETDVL-----DLFNEM-LDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 312
Query: 226 -----------GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
Y++ A L + M +AW + SGY +G+ E+ FR M
Sbjct: 313 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 372
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
S G + D +++ G+ LHA+V++ + ++ + +LI Y K
Sbjct: 373 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQF----IGASLIEVYAK 428
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTV 389
C + A +VF M +D+V+W++I++ Y + EEA +F ++ N +T+
Sbjct: 429 CSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFIS 488
Query: 390 MISGLAESGFGEESLKLFNQM 410
++S + SG +E + +F+ M
Sbjct: 489 ILSACSHSGLIKEGINMFDIM 509
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH- 275
E S++ +I ++ + A KL H WNA++ Y G + E FR+M+
Sbjct: 6 EESFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNN 65
Query: 276 --SMGIQMDEYTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITF 331
S+ I+ Y+ I+ GL G+ +H + L+ V + F V +ALI
Sbjct: 66 VSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGF-LKKVRIDGDMF---VGSALIDL 121
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
YTKCG++ A +VF + P D+V W +I+SGY
Sbjct: 122 YTKCGQMNDAVKVFMEYPKPDVVLWTSIISGY 153
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 174/441 (39%), Gaps = 79/441 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + IH + + + LID+Y K + A +F + P PD+ T+++S Y
Sbjct: 95 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 154
Query: 83 AAGNVKLAEKLFN---------ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+G+ +LA F+ PVTL S A + + H VK R D
Sbjct: 155 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK---RKGLD 211
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVLNTLLSCYICCASST 192
S + G I +++ D++ W M + C +
Sbjct: 212 NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM-------------VACYADN 258
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIA--------------------------- 225
E+ VL LF+E L ++ +P+W T+++
Sbjct: 259 GAETDVL-----DLFNEM-LDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 312
Query: 226 -----------GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
Y++ A L + M +AW + SGY +G+ E+ FR M
Sbjct: 313 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 372
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
S G + D +++ G+ LHA+V++ + ++ + +LI Y K
Sbjct: 373 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQF----IGASLIEVYAK 428
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTV 389
C + A +VF M +D+V+W++I++ Y + EEA +F ++ N +T+
Sbjct: 429 CSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFIS 488
Query: 390 MISGLAESGFGEESLKLFNQM 410
++S + SG +E + +F+ M
Sbjct: 489 ILSACSHSGLIKEGINMFDIM 509
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH- 275
E S++ +I ++ + A KL H WNA++ Y G + E FR+M+
Sbjct: 6 EESFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNN 65
Query: 276 --SMGIQMDEYTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITF 331
S+ I+ Y+ I+ GL G+ +H + L+ V + F V +ALI
Sbjct: 66 VSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGF-LKKVRIDGDMF---VGSALIDL 121
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
YTKCG++ A +VF + P D+V W +I+SGY
Sbjct: 122 YTKCGQMNDAVKVFMEYPKPDVVLWTSIISGY 153
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 140/320 (43%), Gaps = 48/320 (15%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
H++ ++F + L+ + +++ A K+F+ V RD ++ A++ N +
Sbjct: 160 HNILINEEKANLFVQCALIDMFVKCESLEDARKVFDEMNV--RDLATWTALICGNVWNGE 217
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
AV LF +M+ +G D ++VL + E +H ++ G V N
Sbjct: 218 WDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSN 277
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
++ Y C P ++ Y+ D+
Sbjct: 278 AIIDMYCKCGY---------------------------PDEACLVFSYMVFRDI------ 304
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
V+W+ +I+GY ++G+Y+E+F+ + +M +MG+ +E ++++ A LF
Sbjct: 305 ---------VSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLF 355
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G+++H +VL+ + + V +AL+ Y CG + +A +F M D++ WN++
Sbjct: 356 KQGKEMHNFVLKQGLLTD----VVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSL 411
Query: 360 LSGYINARRLEEAKFIFREV 379
++GY + A F FRE+
Sbjct: 412 IAGYNLVGDFQSAFFTFREI 431
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 162/393 (41%), Gaps = 86/393 (21%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L A+H L +GF + N +ID+YCK PD L+ +Y
Sbjct: 256 LGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGY-------------PD---EACLVFSY- 298
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+ RD +S++ ++ YS N + +L+VRM G +
Sbjct: 299 ----------------MVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVV 342
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
STVL A+ + + +++H V+K G++ V + L+ Y C S +
Sbjct: 343 STVLPALGKLKLFK-QGKEMHNFVLKQGLLTDVVVGSALVDMYANCGS---------IKE 392
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A +F R +LD + WN++I+GY G
Sbjct: 393 AESIF-----------------------------RNMLD----MDIMVWNSLIAGYNLVG 419
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
++ AF TFR++ + + T S++ G G+++H Y R+ + + +
Sbjct: 420 DFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLN----I 475
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
SV N+LI Y+KCG L +VF++M V++ +++N ++S A L E F E
Sbjct: 476 SVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISA-CGAHGLGEKGLKFYEQMNE 534
Query: 383 -----NLLTWTVMISGLAESGFGEESLKLFNQM 410
N +T+ ++S + +G + L+N M
Sbjct: 535 AGMKPNKVTFISLLSACSHAGLVDRGWLLYNSM 567
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 147/337 (43%), Gaps = 55/337 (16%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++AY G+ A F+ P + +++NA+++A + + +++ + M R GFA
Sbjct: 76 LVNAYVNFGSHHYAFLFFSQLP--HKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFA 133
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD +++ VL A S + E + +W + +
Sbjct: 134 PDNYTYPLVLKACSSLQAIE---------IGRW-----------------------VYHN 161
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
++ LF + L I +V+ + L ARK+ D M W A+I
Sbjct: 162 ILINEEKANLFVQCAL-----------IDMFVKCESLEDARKVFDEMNVRDLATWTALIC 210
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL--ISASFNTGLFNCGRQLHAYVLRTVV 314
G V +G ++EA FRKM G++ D S+ + GL G +H LR+
Sbjct: 211 GNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGL-KLGMAMHGCALRSGF 269
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
L V+NA+I Y KCG +A VF M RD+VSW+ +++GY +E+
Sbjct: 270 DSD----LYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFE 325
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ + L T +++S + + G+ LKLF Q K
Sbjct: 326 LYVRMVNMGLTTNEIVVSTVLPA-LGK--LKLFKQGK 359
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 213 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 272
S P + ++ YV A + H +AWNA++ + + + +
Sbjct: 66 SSPHTPLCSHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYH 125
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
M G D YTY ++ A + GR +V ++ E L V ALI +
Sbjct: 126 SMLRHGFAPDNYTYPLVLKACSSLQAIEIGR----WVYHNILINEEKANLFVQCALIDMF 181
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI- 391
KC L AR+VFD+M VRDL +W A++ G + +EA +FR++ L +V++
Sbjct: 182 VKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVA 241
Query: 392 SGLAESGFGEESLKL 406
S L G E LKL
Sbjct: 242 SVLPVCGRLMEGLKL 256
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 188/408 (46%), Gaps = 36/408 (8%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL----FDKTPNPDIFSRTTLLS 79
A+ + + G +++ N LI +CK A+ L + P + + T++
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320
Query: 80 AYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ G V A + + + D +SYN ++ YS + A+ LF ++ P
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVP 380
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
+++T++ + + + D++K G +C V T+L C +
Sbjct: 381 SVVTYNTLIDGGCRTGNLDI-AKGMKDDMIKHG-LCPDVVTFTILVRGFCQMGN------ 432
Query: 198 VLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVA 250
+ A++LFDE LS+ +P ++TT I G ++ + + A + + M P +
Sbjct: 433 --LPMAKELFDEM-LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLIT 489
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+N +I+G + G +++A + +KM GI D TYTS+I A +GL ++ + +L
Sbjct: 490 YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDML 549
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINA 366
+ + PS + LI Y G+L A++ FD+M + +++++NA++ G
Sbjct: 550 KKGIHPS----VVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605
Query: 367 RRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ A +F E+ + N T+T++I+ + + +++LKL+ M
Sbjct: 606 NMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDM 653
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 32/335 (9%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNA--T 97
N LID C++ N+ A + D PD+ + T L+ + GN+ +A++LF+ +
Sbjct: 386 NTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLS 445
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
D I+Y + + A + MK +GF PD +++ ++ + + +
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD- 504
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+L + G+ VP + Y + L+ L+ A ++F + L +
Sbjct: 505 DANELVQKMRLEGI--VPDHVT-----YTSIIHAHLISG--LLRKAEEVFSDM-LKKGIH 554
Query: 218 PS---WTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFDT 270
PS +T +I Y L A+K D M P + +NA+I G + + + A++
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNL 614
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
F +M S G+ ++YTYT LI+ + N + +L+ +L ++P ++AL+
Sbjct: 615 FAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDS----CTHSALMK 670
Query: 331 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
+K KL+ + + +R+ +W ++ G+IN
Sbjct: 671 HLSKDYKLLAVLRL--ENVIREGDTWKSV--GFIN 701
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 167/384 (43%), Gaps = 30/384 (7%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNA-TPVT 100
LI ++ K + +F K N PD+ + +L V E++++
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202
Query: 101 LRDTI-SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
+R TI ++N M+ + + AV++ M+ G P+ S++ ++ +S E +
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFD-RA 261
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
++L + G+ N L+ + C E+ L R++ L +
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGF--CKKEMFEEANDL---RREMLGRGALPTV--VT 314
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ T++ R ++ AR+ LD M + P V++N +I GY R G + EA F ++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
S + TY +LI TG + + + +++ + P + L+ + +
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD----VVTFTILVRGFCQM 430
Query: 336 GKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTW 387
G L A+E+FD+M R D +++ + G + +A + E+ +L+T+
Sbjct: 431 GNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITY 490
Query: 388 TVMISGLAESGFGEESLKLFNQMK 411
V+I+GL + G +++ +L +M+
Sbjct: 491 NVLINGLCKLGNFDDANELVQKMR 514
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 55/347 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F + L+ Y+ + A K+F A + D +S+ +++ +S N G A+ LF
Sbjct: 80 NLFLCSALVDFYAKCFAIVDANKIFRA--MKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M P+ F+ ++V+ A HC LH V+K G V+++L+ CY A
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCY---A 194
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ ++ VL LF+E S+KD + TMI+GY +N
Sbjct: 195 NWGQIDDAVL------LFNET--SEKDTVIYNTMISGYCQN------------------- 227
Query: 250 AWNAMISGYVRHGLY-EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
LY E+A F +M + ++T +S++SA + + GRQ+H+
Sbjct: 228 -------------LYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSL 274
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
V++ SE + V + LI Y+K G + +A+ V D+ ++ V W +++ GY R
Sbjct: 275 VIK---MGSERNVY-VASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGR 330
Query: 369 LEEAKFIFREVPERNLL-----TWTVMISGLAESGFGEESLKLFNQM 410
EA +F + + L +T +++ +GF ++ + FN+M
Sbjct: 331 GLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKM 377
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 51/309 (16%)
Query: 57 PYAH-HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
P H H+ + + F ++L+ Y+ G + A LFN T + +DT+ YN M+ Y
Sbjct: 168 PTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNET--SEKDTVIYNTMISGYC 225
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
NL A+KLFV M+ +P + S++L A S +A +Q+H V+K G
Sbjct: 226 QNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLA-MLLQGRQVHSLVIKMG----- 279
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
E V +AS T+I Y + D+
Sbjct: 280 ------------------SERNVYVAS-------------------TLIDMYSKGGDIDE 302
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASF 294
A+ +LD + V W +MI GY + G EA + F + + + D +T++++A
Sbjct: 303 AQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACN 362
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DL 353
+ G + G + Y + + + + LI Y + G L +AR++ ++MP +
Sbjct: 363 HAGFIDKGEE---YFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNC 419
Query: 354 VSWNAILSG 362
+ W++ LS
Sbjct: 420 IIWSSFLSA 428
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 247 IAVAW--------NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
I VAW N I + + +A ++ +M+ + + +Y + +S+ T
Sbjct: 2 IRVAWKFFGKACKNVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLN 61
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
++ G Q+HAY++R+ + + L + +AL+ FY KC +V A ++F M D VSW +
Sbjct: 62 WHLGIQIHAYMIRSGYEDN----LFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTS 117
Query: 359 ILSGYINARRLEEAKFIFREV 379
+++G+ ++ +A +F+E+
Sbjct: 118 LIAGFSANKQGRDALLLFKEM 138
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 55/347 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F + L+ Y+ + A K+F A + D +S+ +++ +S N G A+ LF
Sbjct: 80 NLFLCSALVDFYAKCFAIVDANKIFRA--MKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M P+ F+ ++V+ A HC LH V+K G V+++L+ CY A
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCY---A 194
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ ++ VL LF+E S+KD + TMI+GY +N
Sbjct: 195 NWGQIDDAVL------LFNET--SEKDTVIYNTMISGYCQN------------------- 227
Query: 250 AWNAMISGYVRHGLY-EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
LY E+A F +M + ++T +S++SA + + GRQ+H+
Sbjct: 228 -------------LYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSL 274
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
V++ SE + V + LI Y+K G + +A+ V D+ ++ V W +++ GY R
Sbjct: 275 VIK---MGSERNVY-VASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGR 330
Query: 369 LEEAKFIFREVPERNLL-----TWTVMISGLAESGFGEESLKLFNQM 410
EA +F + + L +T +++ +GF ++ + FN+M
Sbjct: 331 GLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKM 377
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 51/309 (16%)
Query: 57 PYAH-HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
P H H+ + + F ++L+ Y+ G + A LFN T + +DT+ YN M+ Y
Sbjct: 168 PTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNET--SEKDTVIYNTMISGYC 225
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
NL A+KLFV M+ +P + S++L A S +A +Q+H V+K G
Sbjct: 226 QNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLA-MLLQGRQVHSLVIKMG----- 279
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
E V +AS T+I Y + D+
Sbjct: 280 ------------------SERNVYVAS-------------------TLIDMYSKGGDIDE 302
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASF 294
A+ +LD + V W +MI GY + G EA + F + + + D +T++++A
Sbjct: 303 AQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACN 362
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DL 353
+ G + G + Y + + + + LI Y + G L +AR++ ++MP +
Sbjct: 363 HAGFIDKGEE---YFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNC 419
Query: 354 VSWNAILSG 362
+ W++ LS
Sbjct: 420 IIWSSFLSA 428
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 247 IAVAW--------NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
I VAW N I + + +A ++ +M+ + + +Y + +S+ T
Sbjct: 2 IRVAWKFFGKACKNVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLN 61
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
++ G Q+HAY++R+ + + L + +AL+ FY KC +V A ++F M D VSW +
Sbjct: 62 WHLGIQIHAYMIRSGYEDN----LFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTS 117
Query: 359 ILSGYINARRLEEAKFIFREV 379
+++G+ ++ +A +F+E+
Sbjct: 118 LIAGFSANKQGRDALLLFKEM 138
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 49/313 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI L++ Y+ G+V ++ + +D +S+N++++ +N D ++ F R
Sbjct: 44 DISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRR 103
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVM--CVPSVLNTLLSCYIC 187
M D S S + A S + E + + +H +K G SV N+L+S Y
Sbjct: 104 MNFSEERADHVSLSCAISACSSLGELAFG-ECIHGQGIKLGYKDNSFVSVANSLISLYSQ 162
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + + E+ +F E M +
Sbjct: 163 CEAVDVAET---------VFRE---------------------------------MAYKD 180
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLH 306
V+WNAM+ GY + EAFD +M + G Q D T T+++ L+ GR +H
Sbjct: 181 IVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIH 240
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
Y +R + P L + N LI Y+KC + +A +F DLVSWNA++SGY
Sbjct: 241 GYAIRRHMVPDH---LPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQN 297
Query: 367 RRLEEAKFIFREV 379
+ E+A+ +F+E+
Sbjct: 298 KYYEKAQNLFKEL 310
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 153/369 (41%), Gaps = 70/369 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+L+S YS V +AE +F + +D +S+NAM++ Y+ N + H A L V M+ G
Sbjct: 154 NSLISLYSQCEAVDVAETVFR--EMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTG 211
Query: 135 -FAPDPFSFSTVL---------------------------------GAMSLI-------- 152
F PD + +T+L G + +
Sbjct: 212 CFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEK 271
Query: 153 AEEEWHCQQLHCDVVKWGVMC-----------VPSVLNTLLSCYICCASSTLVESPVLMA 201
AE +H D+V W M ++ LL C C+SST+
Sbjct: 272 AELLFH-STAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCN 330
Query: 202 SARKL-FDEAPLSQKDEPSW-------TTMIAGYVRNDDLASARKLLDGMTHPIAVA-WN 252
SA L F ++ + + + +++ Y+ + DL S +L + +A WN
Sbjct: 331 SANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWN 390
Query: 253 AMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
+I G VR ++EA +TF M D T +++SA N L N G+ LH+ L+
Sbjct: 391 TIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALK 450
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ V N+LIT Y +C + AR+VF + +L +WN ++S + + E
Sbjct: 451 SPFGSDTR----VQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESRE 506
Query: 372 AKFIFREVP 380
A +FR +
Sbjct: 507 ALELFRHLQ 515
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 52/269 (19%)
Query: 60 HHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
H L K+P D + +L++ Y ++ A K+F ++ + ++N M+ A SHN
Sbjct: 445 HSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSIS--NLCTWNCMISALSHNK 502
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
+ A++LF ++ F P+ F+ +VL A + I H +Q+H ++G +
Sbjct: 503 ESREALELFRHLQ---FKPNEFTIVSVLSACTRIGVL-IHGKQVHGYTFRYGYQQNSFIS 558
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
L+ Y C + +A K+F SQK E
Sbjct: 559 AALVDLYSTCGR---------LDNAVKVFRH---SQKSES-------------------- 586
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
AWN+MI+ Y HG E+A + F +M +GI++ + T+ SL+SA ++GL
Sbjct: 587 -----------AWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGL 635
Query: 299 FNCGRQLHAYVLRTV-VQP-SEHFILSVN 325
N G Q + +L ++P +EH + VN
Sbjct: 636 VNQGLQYYECMLEKYGIKPEAEHQVYVVN 664
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
D ++I Y R D+ SARK+ + WN MIS + EA + FR +
Sbjct: 456 DTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQ 515
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+ +E+T S++SA G+ G+Q+H Y R Q + ++ AL+ Y+ C
Sbjct: 516 ---FKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSF----ISAALVDLYSTC 568
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMI 391
G+L A +VF + + +WN++++ Y N E+A +F E+ + + T+ ++
Sbjct: 569 GRLDNAVKVF-RHSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLL 627
Query: 392 SGLAESGFGEESLKLFNQM 410
S + SG + L+ + M
Sbjct: 628 SACSHSGLVNQGLQYYECM 646
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 223 MIAGYVRNDDLASARK--LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+I Y + D+ S+ L + M + V+WN+++ G + +G E++ FR+M+ +
Sbjct: 51 LINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEER 110
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D + + ISA + G G +H ++ + ++ +SV N+LI+ Y++C +
Sbjct: 111 ADHVSLSCAISACSSLGELAFGECIHGQGIK--LGYKDNSFVSVANSLISLYSQCEAVDV 168
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-----ERNLLTWTVMISGLA 395
A VF +M +D+VSWNA++ GY + + EA + E+ + +++T T M+ A
Sbjct: 169 AETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCA 228
Query: 396 E 396
E
Sbjct: 229 E 229
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 186/466 (39%), Gaps = 84/466 (18%)
Query: 14 LNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
L+H S+ +HAH L G + NR ID+Y + NI A +FD + S
Sbjct: 26 LSHKSSN--FLNIVHAHFLKLGLNSYTYLGNRCIDLYTEFGNINDALKVFDDISYKNSTS 83
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
L +G V A +F+ PV RD +S+N M+ Y+ A+ +FV M+
Sbjct: 84 WNICLKGLFKSGQVGKACYMFDEMPV--RDVVSWNTMISGYASCGFSSHALGVFVEMQGA 141
Query: 134 GFAPD--PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV-------------------- 171
G P FS T L + S A +++H +++ G+
Sbjct: 142 GVRPSGFTFSILTSLVSSSCRA------KEVHGMMIRSGMELSNVVIGNSLIAMYGKFDL 195
Query: 172 --MCVPSVL----------NTLL-SCYICCASSTLVESPVLMASARKLFDEAPLSQ---- 214
C +L N+L+ +C+ +E M +A L DE S
Sbjct: 196 VDYCFGVILSMKQLDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLMSV 255
Query: 215 ----KDEPSWTTMIA-----GYVRNDDLASAR--------------KLLDGMTHPIAVAW 251
+D + A G+V N ++SA +L + +
Sbjct: 256 CSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALC 315
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N+MIS Y RH L E+A F I+ +YT + L+S+ G Q+HA V +
Sbjct: 316 NSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALVHK 375
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ V N+L+ Y K G + A +F+++ +DLVSWN I+ G ++
Sbjct: 376 FGFESDS----VVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLSYNGKVCV 431
Query: 372 AKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F E+ P+R +T ++ +E +K+F+QM+
Sbjct: 432 TMDLFEELRREGMPPDR--ITLAAVLLACNYGNLVDEGIKIFSQME 475
>Medtr2g006810.1 | PPR containing plant-like protein | HC |
chr2:618974-616539 | 20130731
Length = 614
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 130/304 (42%), Gaps = 49/304 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI-SYNAMVKAYSHNLDGHAAVKLFV 128
D+F T L + AG V LA +F R + S+N ++ Y N A +LF
Sbjct: 153 DVFETTLLDMYHKCAGCVGLAASVFAKMDARKRTKVGSWNTLIAGYLRNGQALEAFELFR 212
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
RM PD + + V + C CV LN L
Sbjct: 213 RMMCRNILPDLLTLANV----------------IFC--------CVE--LNYL------- 239
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ ++M + D + T ++ Y + D + AR L + + + A
Sbjct: 240 HRGKSIHGYMIMMGV----------ELDLVASTALVDLYCKID-VTKARMLFERLENKDA 288
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V +N M+SGY+ + L EA + F +M M + + + +LISA R +H Y
Sbjct: 289 VVYNVMMSGYLENNLPAEALNVFCEMVKMNVSPNVALFINLISAVSKLRDIRLVRSIHGY 348
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
VL+ + S + + N I Y KCG +V REVF+KM DLVSWN+++ GY++
Sbjct: 349 VLKHMHNMS----VEIANQFIHAYAKCGYVVDEREVFNKMRTMDLVSWNSMIMGYVHNDH 404
Query: 369 LEEA 372
++EA
Sbjct: 405 IDEA 408
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 51/317 (16%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG--HAAVKLFVR 129
F R + + N A K+F+ +T +D +Y +M+ AY H+ + A +
Sbjct: 50 FGRGVHVGSIKLNYNSDHAHKVFD--EITNKDIFAYTSMITAYGHSRGSCVYGAFNIASI 107
Query: 130 MKRDGFAPDPFSFSTVL-GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYIC 187
M++ G P+ + +++ A L+A +E + +H V+ G+ V T LL Y
Sbjct: 108 MQQQGLLPNQVTLVSLMDAAAKLVALQEG--RAVHGYAVRRGIGLGDDVFETTLLDMYHK 165
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
CA + + V +D
Sbjct: 166 CAGCVGLAASVFAK--------------------------------------MDARKRTK 187
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+WN +I+GY+R+G EAF+ FR+M I D T ++I + G+ +H
Sbjct: 188 VGSWNTLIAGYLRNGQALEAFELFRRMMCRNILPDLLTLANVIFCCVELNYLHRGKSIHG 247
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
Y++ V+ L + AL+ Y K + +AR +F+++ +D V +N ++SGY+
Sbjct: 248 YMIMMGVELD----LVASTALVDLYCKI-DVTKARMLFERLENKDAVVYNVMMSGYLENN 302
Query: 368 RLEEAKFIFREVPERNL 384
EA +F E+ + N+
Sbjct: 303 LPAEALNVFCEMVKMNV 319
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 236 ARKLLDGMTHPIAVAWNAMIS--GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 293
A K+ D +T+ A+ +MI+ G+ R AF+ M G+ ++ T SL+ A+
Sbjct: 68 AHKVFDEITNKDIFAYTSMITAYGHSRGSCVYGAFNIASIMQQQGLLPNQVTLVSLMDAA 127
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ-AREVFDKMPVRD 352
GR +H Y +R + + L+ Y KC V A VF KM R
Sbjct: 128 AKLVALQEGRAVHGYAVRRGIGLGDDVF---ETTLLDMYHKCAGCVGLAASVFAKMDARK 184
Query: 353 ---LVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
+ SWN +++GY+ + EA +FR + RN+L
Sbjct: 185 RTKVGSWNTLIAGYLRNGQALEAFELFRRMMCRNIL 220
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 48/308 (15%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L S + + N + +F+ TP T +T YN M++ + AV L+ M +
Sbjct: 43 LRSTINFSNNAQYPILVFHKTP-TNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIV 101
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD F+FS VL A C +L ++ GVM V T C V++
Sbjct: 102 PDSFTFSFVLKA----------CARL--NLFHLGVMIHSLVFKTGFDC------DVFVKT 143
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
V+ ++ G++R+ A K+ D M V+W MI
Sbjct: 144 NVVCFYSK--------------------CGFLRD-----AWKVFDDMVVKNVVSWTGMIC 178
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
G + G + EA D FR + G++ D + ++ A G GR ++ R + +
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGR----WIDRCMREC 234
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ V +L+ YTKCG + +AR VFD M +D+V W+A++ GY + EA +F
Sbjct: 235 GLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELF 294
Query: 377 REVPERNL 384
E+ + N+
Sbjct: 295 FEMRKVNV 302
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 148/358 (41%), Gaps = 58/358 (16%)
Query: 60 HHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
H L KT + D+F +T ++ YS G ++ A K+F+ + +++ +S+ M+
Sbjct: 127 HSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFD--DMVVKNVVSWTGMICGCIEFG 184
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
AV LF + G PD F VL A + + + E +W C+
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLE---------SGRWIDRCMRE-- 233
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
C S R +F T+++ Y + + AR
Sbjct: 234 ---------CGLS------------RNVFVA-----------TSLVDMYTKCGSMEEARF 261
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+ DGM V W+AMI GY +GL EA + F +M + ++ D Y +S+ + G
Sbjct: 262 VFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGA 321
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G + E F+ + + +LI FY KCG + +A V+ M +D V +
Sbjct: 322 LELGNWAKG------LMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVF 375
Query: 357 NAILSGYINARRLEEAKFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQM 410
NA++SG ++ A +F ++ + N T+ ++ G +G ++ FN M
Sbjct: 376 NAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSM 433
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 160/384 (41%), Gaps = 91/384 (23%)
Query: 23 LARAIHAHILTTGFRLTPL---IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLS 79
L R IHAHI+ T +TPL + N L+++Y K + A H+ T
Sbjct: 24 LGRTIHAHIIRT--HVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLT------------- 68
Query: 80 AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
LR +++ +++ HN A+ F M+RD P+
Sbjct: 69 --------------------HLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPND 108
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
F+F V A + + + +Q+H +K G+ + ++ C+ +
Sbjct: 109 FTFPCVFKASAFV-QIPMTGKQIHGLALKGGM---------IYDVFVGCSCFDMYCKTGF 158
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
A +FDE P Q++ +W I+ V++ R+ LD +
Sbjct: 159 RGDACNMFDEMP--QRNLATWNAYISNAVQD------RRSLDAIV--------------- 195
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
AF F +H + + T+ + ++A + N GRQLHA+++R +
Sbjct: 196 -------AFKEFLCVHG---EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKED-- 243
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIF-- 376
+SV N LI FY KCG +V A VF+++ R ++VSW ++L+ + E A +F
Sbjct: 244 --VSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ 301
Query: 377 --REVPERNLLTWTVMISGLAESG 398
+EV + + +V+ S AE G
Sbjct: 302 ARKEVEPTDFMISSVL-SACAELG 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 61/351 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN---LDGHAAVKL 126
D+F + Y G A +F+ P R+ ++NA + + LD A K
Sbjct: 142 DVFVGCSCFDMYCKTGFRGDACNMFDEMP--QRNLATWNAYISNAVQDRRSLDAIVAFKE 199
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
F+ + + P+ +F L A + +QLH +V+ G SV N L+ Y
Sbjct: 200 FLCVHGE---PNSITFCAFLNACVDMVRLNLG-RQLHAFIVRCGYKEDVSVANGLIDFYG 255
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
C + SA +F+ ++K+ SW +M+A V+N + A
Sbjct: 256 KCGD---------IVSAEMVFNRIG-NRKNVVSWCSMLAALVQNHEEERA---------- 295
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
M+ F RK ++ ++ +S++SA G GR +H
Sbjct: 296 ------CMV------------FLQARKE----VEPTDFMISSVLSACAELGGLELGRSVH 333
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
A ++ V+ + + V +AL+ Y KCG + A +VF ++P R+LV+WNA++ GY +
Sbjct: 334 ALAVKACVEDN----IFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQ 389
Query: 367 RRLEEAKFIFREVP------ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ A +F E+ + +T ++S + G E +++F M+
Sbjct: 390 GDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMR 440
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 153/370 (41%), Gaps = 62/370 (16%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L R +HA I+ G++ + N LID Y K +I A +F++
Sbjct: 226 NLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRI--------------- 270
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
GN K + +S+ +M+ A N + A +F++ +++ P F
Sbjct: 271 ---GNRK--------------NVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFM 312
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
S+VL A + + E + +H VK V V + L+ Y C S +
Sbjct: 313 ISSVLSACAELGGLELG-RSVHALAVKACVEDNIFVGSALVDMYGKCGS---------IE 362
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT------HPIAVAWNAMI 255
+A ++F E P +++ +W MI GY D+ A +L + MT P V +++
Sbjct: 363 NAEQVFSELP--ERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISIL 420
Query: 256 SGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
S R G E F M + GI+ + ++ +GL + + + ++ +
Sbjct: 421 SVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVD---RAYEFIQNMAI 477
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW--NAILSGYI-NARRLEE 371
QP+ +SV AL+ GK + +K+ D V + +LS + +A R EE
Sbjct: 478 QPT----ISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEE 533
Query: 372 AKFIFREVPE 381
A + +E+ +
Sbjct: 534 ATVVRKEMKD 543
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+++I+ Y R L A ++ D M+ V+W A+I+G+ + + + FR+M + ++
Sbjct: 147 SSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELK 206
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ +TYTSL+SA +G GR +H ++Q H L V NALI Y+KCG +V
Sbjct: 207 PNYFTYTSLLSACMGSGALGHGRGVHC----QIIQMGFHCYLHVENALIAMYSKCGVIVD 262
Query: 341 AREVFDKMPVRDLVSWNAILSG 362
A +F+ M +D+V+WN+++ G
Sbjct: 263 ALYIFENMVSKDVVTWNSMIVG 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 124/294 (42%), Gaps = 68/294 (23%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+++ ++L+S YS G + A ++F+ V R+ +S+ A++ ++ ++LF R
Sbjct: 142 NVYVGSSLISLYSRCGLLGDAYRVFDEMSV--RNVVSWTAIIAGFAQEWRVDMCLELFRR 199
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ P+ F+++++L A + + H + +HC +++ G C V N L++ Y C
Sbjct: 200 MRGLELKPNYFTYTSLLSA-CMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCG 258
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ A +F+ + KD +W +MI G
Sbjct: 259 ---------VIVDALYIFEN--MVSKDVVTWNSMIVG----------------------- 284
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
M MG+ D T+ ++S+ + GL G+ + +
Sbjct: 285 ------------------------MRIMGVNPDAVTFLGILSSCRHGGLVKEGQVYFSSM 320
Query: 310 LRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILS 361
+ +QP +H+ + ++ + G L++A + MPV + V W ++LS
Sbjct: 321 VDHGLQPELDHY-----SCIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGSLLS 369
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 299 FNCGRQLHAYVLRTVVQPSEHFI--LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
F G Q H +R FI + V ++LI+ Y++CG L A VFD+M VR++VSW
Sbjct: 124 FYGGIQYHCLAIRI------GFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSW 177
Query: 357 NAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESG 398
AI++G+ R++ +FR + + N T+T ++S SG
Sbjct: 178 TAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSG 223
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 59/353 (16%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC----- 159
ISY++ + N D AV LF R+ R P F F+ +LG SL+ + +H
Sbjct: 51 ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILG--SLVKSKHYHTVLYLS 108
Query: 160 QQLHCDVVKWGVMCVPSVL--NTLLSCYI-----------------------CCASSTLV 194
Q++ +K P+++ N L++C+ +TL+
Sbjct: 109 QKMEFRGIK------PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI 162
Query: 195 ESPVLMASARK--LFDEAPLS---QKDEPSWTTMIAGYVRNDDLASARKLL---DG-MTH 245
+ L ++ LF + ++ D+ S+ T+I G + + +A LL DG +
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P V +N +I + L EAFD F +M S GI D TY++LIS G N L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILS 361
++ ++P + N L+ + K GK+ + + VFD M + + V++N+++
Sbjct: 283 FNKMILENIKPDVYTF----NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMD 338
Query: 362 GYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
GY + + +AK IF + + ++ ++++MI+G + +E++ LF +M
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 186/415 (44%), Gaps = 53/415 (12%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N LI+ +C+ IP+A +F K PD + TTL+ G ++ A LF+ V
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAF-LFHDKVV 182
Query: 100 TLR---DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM---SLIA 153
L D ISY ++ + AA+ L R+ + P+ ++T++ +M L+
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 154 E-----EEWHCQQLHCDVVKWGVM----CVPSVLNTLLSCYICCASSTLVES--PVL--- 199
E E + + DVV + + C+ LN + + + ++E+ P +
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF----NKMILENIKPDVYTF 298
Query: 200 ------------MASARKLFDEAPLSQKDEPSWTT---MIAGYVRNDDLASARKLLD--- 241
M + +FD + Q +P++ T ++ GY ++ A+ + +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMM-MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 242 -GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
G +P +++ MI+G+ + ++EA + F++MH I D TY+SLI +G +
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
QL + V P+ S+ +AL + + ++ DK ++ +++ ++
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
Query: 361 SGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
G + +LE+A+ +F + + N+ T+T+MI G G E+L L ++M+
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME 532
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 24/288 (8%)
Query: 44 NRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--AT 97
N L++ +CK + +FD + P+ + +L+ Y V A+ +FN A
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
D SY+ M+ + A+ LF M R PD ++S+++ +S +
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 158 HCQ---QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
Q Q+H V + S+L+ L C + ++ L+ KL D+ Q
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDAL------CKIHQVDKAIALLT---KLKDKG--IQ 467
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGM---THPIAV-AWNAMISGYVRHGLYEEAFDT 270
+ +++ +I G ++ L ARK+ +G+ H + V + MI G+ GL+ EA
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
KM G D TY +I + F + +L ++ V+P +
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 175/412 (42%), Gaps = 69/412 (16%)
Query: 17 PSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
P+ + +L + +H+ I T+G+ I N L++ Y K + A LFD+ P + S
Sbjct: 90 PTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNI 149
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKA-YSHNLDGHAAVKLFVRMKRDGF 135
++ AY GN++ A+ LF+ +T R+ ++NAMV L+ A LF RM GF
Sbjct: 150 MIKAYLEMGNIENAKNLFD--EMTERNVATWNAMVTGLVKFGLNEEAL--LFSRMNVLGF 205
Query: 136 APDPFSFSTV------LGAMSL----------IAEE--EWHCQQLHCDVVKWGVM----- 172
PD +SF +V L A+S+ + E +W +C++V W +
Sbjct: 206 VPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERIIKW---MPNCNLVAWNTLMAGKA 262
Query: 173 ---CVPSVLN---------------TLLSCYICCAS-STLVESPVLMASARKLFDEAPLS 213
C VL+ T +S C+ +TL + + A K + ++
Sbjct: 263 QNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVT 322
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
+++++ Y + L + K V W++MI+ Y HG E+A F
Sbjct: 323 -----VISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFND 377
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCG-----RQLHAYVLRTVVQPSEHFILSVNNAL 328
+ +E T+ SL+ A ++GL + G + Y L+ + EH+ +
Sbjct: 378 KEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARL---EHY-----TCV 429
Query: 329 ITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREV 379
+ + G L +A + MPV D + W +LS + E A+ + EV
Sbjct: 430 VDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEV 481
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I+ G ++AF++F GI + ++ LI + T + G+QLH+ + T
Sbjct: 54 ITTLCSKGHIKKAFESFL----YGIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIF-TSG 108
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
S+ FI +N L+ FY+K G+L A ++FD+MP R+ +S N ++ Y+ +E AK
Sbjct: 109 YSSDKFI---SNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKN 165
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F E+ ERN+ TW M++GL + G EE+L LF++M
Sbjct: 166 LFDEMTERNVATWNAMVTGLVKFGLNEEAL-LFSRM 200
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
+++ M + VAWN +++G ++ ++ D + M G + D T+ S+IS+
Sbjct: 239 GERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSE 298
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+Q+HA V++ +++V ++L++ Y+KCG L + + F + RD+V
Sbjct: 299 LATLCQGKQIHAEVIKAGASS----VVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVL 354
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
W+++++ Y + E+A +F + + N+ +T+ ++ + SG ++ L F+ M
Sbjct: 355 WSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMM 413
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 37/319 (11%)
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS------TVLGAMSLIAEEEW 157
T YN +++A S H L+ +M G +P+ ++F+ T L ++SL
Sbjct: 47 TFLYNKLIQACSSK---HQCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSL------ 97
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
Q +H +K G LL Y + AR +FDE +S K+
Sbjct: 98 -GQMIHTQFMKSGFKHDVFASTALLDMYAKLGC---------LKFARNVFDE--MSVKEL 145
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-S 276
+W M+AG R D+ A +L M V+W M+SGY+++ YE+A F +M
Sbjct: 146 ATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMERE 205
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
+ +E T S++ A N G G+++ Y + + L V NA++ Y KCG
Sbjct: 206 KDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKN----LFVCNAVLEMYAKCG 261
Query: 337 KLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL- 394
K+ A +VFD++ R+L SWN+++ G + +A ++ ++ L V GL
Sbjct: 262 KIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLL 321
Query: 395 ---AESGFGEESLKLFNQM 410
G E+ +F M
Sbjct: 322 LACTHGGMVEKGKHVFQSM 340
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 147/344 (42%), Gaps = 53/344 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+L + IH + +GF+ L+D+Y K + +A ++FD+ ++ + +++
Sbjct: 96 SLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGC 155
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPF 140
+ G+++ A +LF P R+ +S+ MV Y N A+ LF+RM+R+ +P+
Sbjct: 156 TRFGDMERALELFWLMPS--RNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEV 213
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ ++VL A + + E Q++ K G V N +L Y C +
Sbjct: 214 TLASVLPACANLGALEIG-QRVEVYARKNGFFKNLFVCNAVLEMYAKCGK---------I 263
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A K+FDE G RN +WN+MI G
Sbjct: 264 DVAWKVFDE---------------IGRFRN-----------------LCSWNSMIMGLAV 291
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSE 318
HG +A + +M G D+ T+ L+ A + G+ G+ + + R ++ E
Sbjct: 292 HGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLE 351
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
H+ ++ + G+L +A EV +MP++ D V W +L
Sbjct: 352 HY-----GCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLG 390
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+L A+ LL P +N +I + F + +M+ G ++YT+ L +
Sbjct: 31 NLNYAQVLLHHSQKPTTFLYNKLIQACSSK---HQCFTLYSQMYLHGHSPNQYTFNFLFT 87
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ + G+ +H +++ + H + + + AL+ Y K G L AR VFD+M V+
Sbjct: 88 TCTSLSSLSLGQMIHTQFMKSGFK---HDVFA-STALLDMYAKLGCLKFARNVFDEMSVK 143
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+L +WNA+++G +E A +F +P RN+++WT M+SG ++ E++L LF +M+
Sbjct: 144 ELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRME 203
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 182/442 (41%), Gaps = 62/442 (14%)
Query: 13 QLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP----N 68
Q N P +L + ++ TG N LI C+S+ + +A LFDK
Sbjct: 128 QQNRPHYVTSL----YTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQ 183
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P+ F+ L+ + AG K A + + + + YN +V ++ A KL
Sbjct: 184 PNKFTVGILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVE 243
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS----VLNTLLSC 184
RM G PD +F++ + A+ A + + ++ D+ G + +P N +L
Sbjct: 244 RMTEKGLLPDVVTFNSRISALCR-AGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
+ C + E+ L+ + +K + L S+ T + G +RN L R +LD M
Sbjct: 303 F--CQEGMMEEARSLVETMKKGGNFVSLE-----SYNTWLLGLLRNGKLLEGRSVLDEMV 355
Query: 245 ----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
P ++N ++ G R+ + +A M S G+ D TYT+L+ + G
Sbjct: 356 ENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVF 415
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSW 356
+ + ++R P+ + N L+ K G+ +A E+ KM + D V+
Sbjct: 416 EAKAILNEMIRKGCHPNTYTC----NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTC 471
Query: 357 NAILSGYINARRLEEAKFIFRE----------------------------VPERNLLTWT 388
N +++G LE+A + E VP+ ++T+T
Sbjct: 472 NIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPD--VITYT 529
Query: 389 VMISGLAESGFGEESLKLFNQM 410
+I+GL + G EE+ K F +M
Sbjct: 530 TLINGLCKVGKLEEAKKKFIEM 551
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 177/440 (40%), Gaps = 64/440 (14%)
Query: 22 TLARAIHAHILTTG-------FRLTPLIR-NRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
++IH +L +R +I+ N LI++Y K S + A +LFD+ + S
Sbjct: 29 NFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVS 88
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISY--NAMVKAYSHNLDGHAAVKLFVRMK 131
L+ Y +G KLF +L Y ++ A +H + ++F M+
Sbjct: 89 YNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAH------SGRVFEGMQ 142
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVV-------------KWGVMCVPSVL 178
GF F F V + + + H D+ C SVL
Sbjct: 143 CHGFL---FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVL 199
Query: 179 NTLLSCY----------------ICCASSTLVESPVLMASARKLFDEAPLSQK------- 215
N L+ + S T V L R L + +
Sbjct: 200 NALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLT 259
Query: 216 -DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
D + ++ + + D+ SARK+ DG+ + V W ++++ Y+++G +EE + M
Sbjct: 260 FDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCM 319
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
G +E+T+ L++A G LHA V + ++ + V NALI Y+K
Sbjct: 320 DREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNR----VIVGNALINMYSK 375
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVM 390
CG + + +VF M RD+++WNA++ GY ++A +F+++ N +T+ +
Sbjct: 376 CGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGV 435
Query: 391 ISGLAESGFGEESLKLFNQM 410
+S A E NQ+
Sbjct: 436 LSACAHLALVNEGFYYLNQL 455
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 136/352 (38%), Gaps = 87/352 (24%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + L+ + G+V A K+F+ + R+ + + +++ AY N + + L
Sbjct: 261 DVFVGSMLVDMFGKCGDVLSARKVFDG--LQNRNVVVWTSLMTAYLQNGEFEETLNLLSC 318
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R+G + F+F+ +L A + +A H LH V K G+ V N L++ Y C
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALR-HGDLLHARVEKLGIKNRVIVGNALINMYSKCG 377
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ +S FD +RN D+ +
Sbjct: 378 C--------IDSSYDVFFD-------------------MRNRDI---------------I 395
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAY 308
WNAMI GY +HGL ++A F+ M S G + T+ ++SA + L N G L+
Sbjct: 396 TWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQL 455
Query: 309 VLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAR------------------------- 342
+ V+P EH+ ++ + G L +A
Sbjct: 456 MKHFKVEPGLEHY-----TCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510
Query: 343 ----------EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
E +M RD+ ++ + + Y AR + I + + ERN+
Sbjct: 511 RNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNV 562
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVN----NALITFYTKCGKLVQAREVFDKMPV 350
NT N G+ +H +L + H N N+LI Y KC KL AR +FD+M +
Sbjct: 24 NTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSL 83
Query: 351 RDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESG 398
R +VS+N ++ GY+++ E +F+ + + N +T ++S A SG
Sbjct: 84 RSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSG 135
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 154/365 (42%), Gaps = 69/365 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKL---FNATPVTLRDTISYNAMVKAYSHN 117
HL + I S+ + S N+ A KL F+ P IS+N +++ Y+ +
Sbjct: 34 HLNSLHNDTHILSQLVYFFSLSPFKNLSHARKLVFHFSNNP----SPISWNILIRGYASS 89
Query: 118 LDGHAAVKLFVRMKRDGFAPD----PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC 173
++ +F +M+ +G P+ PF F + AM+L+ E +Q+H D+VK+G+
Sbjct: 90 DSPIESIWVFKKMRENGVKPNKLTYPFIFKSC--AMALVLCEG---KQVHADLVKFGLDS 144
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
V N +++ Y CC +
Sbjct: 145 DVYVCNNMINFYGCCKK------------------------------------------I 162
Query: 234 ASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 293
ARK+ D M V+WN++++ V + + F KM + DE + L+S
Sbjct: 163 VYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVC 222
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
G + GR +H+ ++ + S H + AL+ Y K G L AR VF++M R++
Sbjct: 223 AELGYLSLGRWVHSQLILKGMVLSVH----LGTALVDMYGKSGALGYARVVFERMEKRNV 278
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPER-------NLLTWTVMISGLAESGFGEESLKL 406
+W+A++ G EEA +F + ++ N +T+ ++ + +G +E +
Sbjct: 279 WTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRY 338
Query: 407 FNQMK 411
F M+
Sbjct: 339 FRDME 343
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 189/451 (41%), Gaps = 88/451 (19%)
Query: 40 PLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
PL++ L + S+ I + H + + D F + L++ Y+ G ++ A+++F+ +
Sbjct: 83 PLLQQCLENCSFSSTQIIHCH-IVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDH--M 139
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFSFSTVLGAMSLIAEEEWH 158
R+ +++ ++K Y N A+ LF M P ++ + L A + + +
Sbjct: 140 NRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLG 199
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICC------------------------ASSTLV 194
+QLH ++K+ V S+ N L S Y C A S
Sbjct: 200 -EQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACG 258
Query: 195 ESPVLMASAR----KLFDEAPLSQKDEPSWTTMIA---------------------GY-- 227
E M R L DE + Q +E + T+ ++ GY
Sbjct: 259 EKGEAMKGVRVFVEMLLDEVQV-QPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYES 317
Query: 228 ---VRNDDL---------ASARKLLDGMTHPIAVAWNAMISGYVRH--------GLYE-- 265
VRN L A++L GM V WNAMI+G+ + Y+
Sbjct: 318 NLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKG 377
Query: 266 -EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
EA + F K++ G++ D +T++S++S G Q+HA ++T + V
Sbjct: 378 IEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSD----VVV 433
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP---- 380
+++I Y KCG + +A +VF +M +R ++ W +++G+ ++A +F ++
Sbjct: 434 GSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGI 493
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
NL+T+ ++S +G E+ F M+
Sbjct: 494 RPNLVTFVGVLSACGSAGMVNEAFNYFEIMQ 524
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 174/408 (42%), Gaps = 82/408 (20%)
Query: 14 LNHPSATQTLARAIHAHILTT--GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI 71
L+ + L I H L T G+ +RN L+ +Y K I A LF + ++
Sbjct: 291 LSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNL 350
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
+ ++ AG+ ++ E +D +S AY ++ A+ LF ++
Sbjct: 351 VTWNAMI-----AGHAQMME--------LSKDNLS------AYQKGIE---ALNLFSKLN 388
Query: 132 RDGFAPDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
R G PDPF+FS+VL S ++A E+ +Q+H +K G + V +++++ Y C S
Sbjct: 389 RSGMKPDPFTFSSVLSVCSKMMALEQG--EQIHARTIKTGFLSDVVVGSSMINMYNKCGS 446
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ A K+F E +S + WTTM
Sbjct: 447 ---------IERASKVFLE--MSIRTMILWTTM--------------------------- 468
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
I+G+ +HG ++A + F M +GI+ + T+ ++SA + G+ N A+
Sbjct: 469 ----ITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVN-----EAFNY 519
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS----WNAILSGYINA 366
++Q E+ I V + + +L Q +E FD + D + W+ ++ G ++
Sbjct: 520 FEIMQ-KEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQ 578
Query: 367 RRLE---EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
LE +A + ++ T+ ++++ +G ++ ++ N M+
Sbjct: 579 GNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMR 626
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
R+ ++EAF ++ + ++D Y L+ F+ + +H ++++T H
Sbjct: 58 RNLKFQEAFSLAKESNE---EVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKT----GSH 110
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+++ L+T Y KCG++ A++VFD M R+ V+W ++ GY+ + A +F E+
Sbjct: 111 EDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEM 170
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 177/409 (43%), Gaps = 42/409 (10%)
Query: 23 LARAIHAHILTTGFRLTPLI--RNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTT 76
L A L TG + P + N ++ C I A L DK + PD+ + T
Sbjct: 297 LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNT 356
Query: 77 LLSA----YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR 132
L+ + KL E++ A V + +++N M+K + A + V+M
Sbjct: 357 LIDGCFEHRGSDAAFKLVEEM-KARGVK-ENGVTHNIMIKWFCTEGKIDEASNVMVKMVE 414
Query: 133 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
GF+PD F+++T++ A + ++ ++ + G+ LNTLL + C
Sbjct: 415 SGFSPDCFTYNTMINGYCK-AGKMAEAYKMMDEMGRKGLKLDTFTLNTLL--HTMCLEKQ 471
Query: 193 LVESPVLMASARK---LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L ++ L ARK + DE ++ T+I GY +++ A KL + M V
Sbjct: 472 LDDAYTLTMKARKRGYILDEV--------TYGTLIMGYFKDEQADRALKLWEEMKETGIV 523
Query: 250 A----WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
A +N +I G G ++A D ++ G+ DE T +I G Q
Sbjct: 524 ATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQF 583
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD----KMPVRDLVSWNAILS 361
H ++ ++P + N L+ + G L + +F+ K D V++N I+S
Sbjct: 584 HNKMVEHSLKPD----IFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639
Query: 362 GYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKL 406
+ RRLE+A + E+ +NL T+ +++GL ++G EE+ KL
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL 688
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 140/320 (43%), Gaps = 41/320 (12%)
Query: 113 AYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVK 168
AY + H ++F +MKR F P+ + +T+L A L+ H +++ D VK
Sbjct: 147 AYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNA--LVRSNSSHSLVFSREVFQDAVK 204
Query: 169 WGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 228
GV + N L+ Y C ++T E + + + + P D ++ T++
Sbjct: 205 LGVQPNVNTFNILIHGY-CSDNNT--EEALRLINQMGEYGCCP----DNVTYNTVLTALC 257
Query: 229 RNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
+ L R LL M + P +N ++ GY + +EA + M G+ D +
Sbjct: 258 KRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW 317
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR-- 342
TY +++ GL + G+ A LR + E F L + ++T+ T + R
Sbjct: 318 TYNTMVR-----GLCDEGKIDEAVRLRDKM---ESFKLVPD--VVTYNTLIDGCFEHRGS 367
Query: 343 ----EVFDKMPVRDL----VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVM 390
++ ++M R + V+ N ++ + +++EA + ++ E + T+ M
Sbjct: 368 DAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTM 427
Query: 391 ISGLAESGFGEESLKLFNQM 410
I+G ++G E+ K+ ++M
Sbjct: 428 INGYCKAGKMAEAYKMMDEM 447
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 140/343 (40%), Gaps = 86/343 (25%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HA G + +L+ +Y S+++ A +LFDK P ++F
Sbjct: 66 GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFL---------- 115
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+N +++ Y+ N A+ L+ +M G PD F+
Sbjct: 116 -----------------------WNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLP 152
Query: 144 TVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
VL A+S I E + +H V+K G
Sbjct: 153 FVLKACSALSAIGEG----RSIHEYVIKSGW----------------------------- 179
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
R LF A L I Y + + A ++ D + AV WN+M++ Y +
Sbjct: 180 --ERDLFVGAAL-----------IDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQ 226
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+G +E+ R+M + G++ E T ++IS+S + GR++H + R Q ++
Sbjct: 227 NGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSND-- 284
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
V ALI Y KCG + A +F+++ + +VSWNAI++GY
Sbjct: 285 --KVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGY 325
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 4/159 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T ++ Y ++ L +AR L D + WN +I GY +G ++ A + KM G++
Sbjct: 86 TKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLR 145
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D +T ++ A GR +H YV+++ + L V ALI Y KCG ++
Sbjct: 146 PDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERD----LFVGAALIDMYAKCGCVMD 201
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
A VFDK+ VRD V WN++L+ Y +E+ + RE+
Sbjct: 202 AGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREM 240
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 61/349 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L+ Y+ G V A ++F+ + +RD + +N+M+ AY+ N ++ L
Sbjct: 182 DLFVGAALIDMYAKCGCVMDAGRVFD--KIVVRDAVLWNSMLAAYAQNGHPDESISLCRE 239
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M +G P + TV+ + + +A C+P
Sbjct: 240 MAANGVRPTEATLVTVISSSADVA-------------------CLP-------------- 266
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ R F Q ++ T +I Y + + A L + + V
Sbjct: 267 ----YGREIHGFGWRHGF------QSNDKVKTALIDMYAKCGSVKVALALFERLREKRVV 316
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WNA+I+GY HGL A D F KM + D T+ +++A L + GR L+ +
Sbjct: 317 SWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLM 375
Query: 310 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS----- 361
+R + P+ +H+ +I CG+L +A ++ M V+ D W A+L+
Sbjct: 376 VRDYGITPTVQHY-----TCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIH 430
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
G + L K I E+ + + ++ + A+SG E KL M
Sbjct: 431 GNVELAELALEKLI--ELEPDDSGNYVILANMYAQSGKWEGVEKLRQVM 477
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
Y YTSL+ + ++ N G+QLHA + ++ + L+ Y L+ AR
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQ----DLATKLVHLYAVSNSLLNARN 103
Query: 344 VFDKMPVRDLVSWNAILSGY 363
+FDK+P ++L WN ++ GY
Sbjct: 104 LFDKIPKQNLFLWNVLIRGY 123
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 59/353 (16%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC----- 159
ISY++ + N D AV LF R+ R P F F+ +LG SL+ + +H
Sbjct: 51 ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILG--SLVKSKHYHTVLYLS 108
Query: 160 QQLHCDVVKWGVMCVPSVL--NTLLSCYI-----------------------CCASSTLV 194
Q++ +K P+++ N L++C+ +TL
Sbjct: 109 QKMEFRGIK------PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLS 162
Query: 195 ESPVLMASARK--LFDEAPLS---QKDEPSWTTMIAGYVRNDDLASARKLL---DG-MTH 245
+ L ++ LF + ++ D+ S+ T+I G + + +A LL DG +
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P V +N +I + L EAFD F +M S GI D TY++LIS G L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILS 361
++ ++P + N L+ + K GK+ + + VFD M + + V++N+++
Sbjct: 283 FNKMILENIKPDVYTF----NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMD 338
Query: 362 GYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
GY + + +AK IF + + ++ ++++MI+G + +E++ LF +M
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 187/427 (43%), Gaps = 77/427 (18%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N LI+ +C+ IP+A +F K PD + TTL G ++ A LF+ V
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF-LFHDKVV 182
Query: 100 TLR---DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM---SLIA 153
L D ISY ++ + AA+ L R+ + P+ ++T++ +M L+
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 154 E-----EEWHCQQLHCDVVKWGVM----CV--------------------PSV--LNTLL 182
E E + + DVV + + C+ P V N L+
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT---MIAGYVRNDDLASARKL 239
+ + C M + +FD + Q +P++ T ++ GY ++ A+ +
Sbjct: 303 NAF--CKDGK-------MKEGKTVFDMM-MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 240 LD----GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
+ G +P +++ MI+G+ + ++EA + F++MH I D TY+SLI
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID---- 408
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFI---LSVNNALITFYTKCGKLVQAREVFDKMPVR- 351
GL GR +Y L+ V Q + + + N+++ K ++ +A + K +
Sbjct: 409 -GLSKSGRI--SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 352 ---DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESL 404
D+ +++ ++ G + +LE+A+ +F ++ + ++ +T+MI G G E+L
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525
Query: 405 KLFNQMK 411
L ++M+
Sbjct: 526 ALLSKME 532
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 24/264 (9%)
Query: 44 NRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--AT 97
N L++ +CK + +FD + P+ + +L+ Y V A+ +FN A
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
D SY+ M+ + A+ LF M R PD ++S+++ +S +
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 158 HCQ---QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
Q Q+H V + S+L+ L C + + ++ L+ K D+ Q
Sbjct: 419 ALQLVDQMHDRGVPPNICTYNSILDAL------CKTHQVDKAIALLT---KFKDKG--FQ 467
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGM---THPIAV-AWNAMISGYVRHGLYEEAFDT 270
D +++ +I G ++ L ARK+ + + + + V A+ MI G+ GL+ EA
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527
Query: 271 FRKMHSMGIQMDEYTYTSLISASF 294
KM G D TY +I + F
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLF 551
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 149/388 (38%), Gaps = 65/388 (16%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNA 96
++ N +ID CK + A LF K +PD+ + + L+S + G +K A LFN
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285
Query: 97 TPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE 154
+ D ++N +V A+ + +F M + G P+ ++++++ L+ E
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 155 EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
V S+ NT+ +
Sbjct: 346 ----------------VNKAKSIFNTMAQGGV---------------------------N 362
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDT 270
D S++ MI G+ + A L M P V ++++I G + G A
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
+MH G+ + TY S++ A T + L QP +S + LI
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD----ISTYSILIK 478
Query: 331 FYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNLL- 385
+ GKL AR+VF+ + V+ D+ ++ ++ G+ EA + ++ + +
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538
Query: 386 ---TWTVMISGLAESGFGEESLKLFNQM 410
T+ ++I L + + + KL +M
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREM 566
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 54/341 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+LL Y G++K A LF ++ +D IS++ M Y+ N + LF+ M
Sbjct: 156 NSLLHLYGKTGSIKNASNLFR--EMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKR 213
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ + +VL A + I+ E ++H V +G +V L+ Y+ C S
Sbjct: 214 IKPNWVTVVSVLRACACISNLE-EGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPE-- 270
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
A F+ P +KD +AW +
Sbjct: 271 -------KAVDFFNRMP--KKD-------------------------------VIAWAVL 290
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
SGY +G+ E+ FR M S G + D +++ G+ HA+V++
Sbjct: 291 FSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGF 350
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ ++ + +LI Y KC + A +VF M +D+V+W++I++ Y + EEA
Sbjct: 351 ENNQF----IGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALK 406
Query: 375 IFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQM 410
F ++ N +T+ ++S + SG +E + +F+ M
Sbjct: 407 FFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 447
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGI 279
+ +I Y + + A ++ P V W +++SGY + G E A F +M S +
Sbjct: 54 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 113
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
D T S+ SA F GR +H +V R + L + N+L+ Y K G +
Sbjct: 114 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNK----LCLANSLLHLYGKTGSIK 169
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL-TWTVMISGL 394
A +F +M +D++SW+ + + Y + + +F E+ ++ + W ++S L
Sbjct: 170 NASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 225
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 54/341 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+LL Y G++K A LF ++ +D IS++ M Y+ N + LF+ M
Sbjct: 248 NSLLHLYGKTGSIKNASNLFR--EMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKR 305
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ + +VL A + I+ E ++H V +G +V L+ Y+ C S
Sbjct: 306 IKPNWVTVVSVLRACACISNLE-EGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPE-- 362
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
A F+ P +KD +AW +
Sbjct: 363 -------KAVDFFNRMP--KKD-------------------------------VIAWAVL 382
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
SGY +G+ E+ FR M S G + D +++ G+ HA+V++
Sbjct: 383 FSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGF 442
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ ++ + +LI Y KC + A +VF M +D+V+W++I++ Y + EEA
Sbjct: 443 ENNQF----IGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALK 498
Query: 375 IFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQM 410
F ++ N +T+ ++S + SG +E + +F+ M
Sbjct: 499 FFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 539
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH---SMGIQMDE 283
Y R + A KL H WNA++ Y G + E F +M S+ I+
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKP 105
Query: 284 YTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
Y+ I+ GL G+ +H + L+ V ++ F V +ALI YTKCG++ A
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKMIHGF-LKKVRIDNDMF---VGSALIDLYTKCGQMNDA 161
Query: 342 REVFDKMPVRDLVSWNAILSGY 363
EVF + P D+V W +I+SGY
Sbjct: 162 VEVFMEYPKPDVVLWTSIVSGY 183
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGI 279
+ +I Y + + A ++ P V W +++SGY + G E A F +M S +
Sbjct: 146 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 205
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
D T S+ SA F GR +H +V R + L + N+L+ Y K G +
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNK----LCLANSLLHLYGKTGSIK 261
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL-TWTVMISGL 394
A +F +M +D++SW+ + + Y + + +F E+ ++ + W ++S L
Sbjct: 262 NASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 317
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 54/341 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+LL Y G++K A LF ++ +D IS++ M Y+ N + LF+ M
Sbjct: 248 NSLLHLYGKTGSIKNASNLFR--EMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKR 305
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ + +VL A + I+ E ++H V +G +V L+ Y+ C S
Sbjct: 306 IKPNWVTVVSVLRACACISNLE-EGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPE-- 362
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
A F+ P +KD +AW +
Sbjct: 363 -------KAVDFFNRMP--KKD-------------------------------VIAWAVL 382
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
SGY +G+ E+ FR M S G + D +++ G+ HA+V++
Sbjct: 383 FSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGF 442
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ ++ + +LI Y KC + A +VF M +D+V+W++I++ Y + EEA
Sbjct: 443 ENNQF----IGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALK 498
Query: 375 IFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQM 410
F ++ N +T+ ++S + SG +E + +F+ M
Sbjct: 499 FFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 539
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH---SMGIQMDE 283
Y R + A KL H WNA++ Y G + E F +M S+ I+
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKP 105
Query: 284 YTYTSLISASFNTGLFNC--GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
Y+ I+ GL G+ +H + L+ V ++ F V +ALI YTKCG++ A
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKMIHGF-LKKVRIDNDMF---VGSALIDLYTKCGQMNDA 161
Query: 342 REVFDKMPVRDLVSWNAILSGY 363
EVF + P D+V W +I+SGY
Sbjct: 162 VEVFMEYPKPDVVLWTSIVSGY 183
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGI 279
+ +I Y + + A ++ P V W +++SGY + G E A F +M S +
Sbjct: 146 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 205
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
D T S+ SA F GR +H +V R + L + N+L+ Y K G +
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNK----LCLANSLLHLYGKTGSIK 261
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL-TWTVMISGL 394
A +F +M +D++SW+ + + Y + + +F E+ ++ + W ++S L
Sbjct: 262 NASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 317
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 162/379 (42%), Gaps = 57/379 (15%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT 100
L+ N I+ S + H L + D + T L++ Y G+V A K+F+ T
Sbjct: 79 LLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDET--R 136
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC- 159
+ +NA+ +A + G + L+ +M G + F+++ VL A + E C
Sbjct: 137 EKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKA--CVVSELSICP 194
Query: 160 ----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK 215
+++H +++ G V+ TLL Y A V + A +F P K
Sbjct: 195 LRKGKEIHAHILRHGYEGHVHVMTTLLDVY---ARFGYV------SYASSVFGAMP--DK 243
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ SW+ MIA Y +N+ A +L M EA DT
Sbjct: 244 NIVSWSAMIACYAKNEMPMKALELFQIMM--------------------LEACDTVP--- 280
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+ T S++ A + G+ +HAYVLR + + L V N LIT Y +C
Sbjct: 281 ------NPITMVSVLQACASLAALEHGKLVHAYVLRRGLDST----LPVLNTLITMYGRC 330
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMI 391
G++ + VFD M RD++SWN+++S Y ++A IF + R + +T+ ++
Sbjct: 331 GEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVL 390
Query: 392 SGLAESGFGEESLKLFNQM 410
+ +G EE+ LF M
Sbjct: 391 CACSHAGLVEEAKILFESM 409
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 58/345 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
TTLL Y+ G V A +F A P ++ +S++AM+ Y+ N A++LF M +
Sbjct: 218 TTLLDVYARFGYVSYASSVFGAMPD--KNIVSWSAMIACYAKNEMPMKALELFQIMMLEA 275
Query: 135 F--APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
P+P + +VL A + +A E H + +H V++ G+ ST
Sbjct: 276 CDTVPNPITMVSVLQACASLAALE-HGKLVHAYVLRRGL------------------DST 316
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
L PVL T+I Y R ++++ +++ D M ++WN
Sbjct: 317 L---PVL---------------------NTLITMYGRCGEISTGQRVFDYMKKRDVISWN 352
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-R 311
++IS Y HGL ++A F M + G+ T+ +++ A + GL + L +L +
Sbjct: 353 SLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNK 412
Query: 312 TVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YINA 366
+ P EH+ ++ + +L +A E+ M + W ++L + N
Sbjct: 413 YRIHPRMEHYA-----CMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNV 467
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E A + E+ +N + ++ A+S + ++ Q++
Sbjct: 468 ELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLE 512
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 177/396 (44%), Gaps = 59/396 (14%)
Query: 49 IYCKSSNIPYAHHLF-------DKTPNPDIFSRTTLLSAYSAAGNVKLA----EKL-FNA 96
IY + +N P+ +L ++ P P I +L++ + + +A +KL F
Sbjct: 34 IYTQFNNNPHHENLISRFNRLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKG 93
Query: 97 TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE-- 154
D +YN ++ +S H A LF + + G+ PD +F+T++ + L E
Sbjct: 94 IK---PDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVH 150
Query: 155 ------EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFD 208
E+ + D V + +++N L C T +A +L
Sbjct: 151 KALNFFEKLVVLKFQLDRVSY-----ETLINGL-----CKVGET--------RAALRLLK 192
Query: 209 EA--PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHG 262
E + Q D +T +I G ++ + A L M P +NAMI G+ G
Sbjct: 193 EVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVG 252
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
++A F M ++ DEYT+ +L+SA G G+ + A +++ V+P +
Sbjct: 253 RLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPD----I 308
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFRE 378
N+L+ Y ++ +A+ +F+ M R ++ S++ +++G+ + ++EA +F+E
Sbjct: 309 ITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQE 368
Query: 379 VPERNLLTWTV----MISGLAESGFGEESLKLFNQM 410
+ + ++ T+ +I G +SG ++L+L ++M
Sbjct: 369 MHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEM 404
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 166/415 (40%), Gaps = 69/415 (16%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP--- 67
+QL H A ++ A+IL G+ + N LI+ C + A + F+K
Sbjct: 108 FSQLGHTH----FAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLK 163
Query: 68 -NPDIFSRTTLLSAYSAAGNVKLAEKLFNAT--PVTLRDTISYNAMVKAYSHNLDGHAAV 124
D S TL++ G + A +L + D + Y A++ + A
Sbjct: 164 FQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAF 223
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
L+ M +PD F+++ ++ ++ + L D+ V NTL+S
Sbjct: 224 DLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLK-DAIGLFNDMKLENVEADEYTFNTLVSA 282
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
+ C + E ++A K + D ++ +++ GY ++ A+ + + M
Sbjct: 283 F--CKEGNVREGKAVVAVMMK-----EGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMV 335
Query: 245 HPIAVA----WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
A ++ MI+G+ + + +EA + F++MH I D Y+SLI
Sbjct: 336 QRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSLIDG-------- 387
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSW 356
+ K G++ QA E+ D+M R +++++
Sbjct: 388 -------------------------------FCKSGRIPQALELVDEMHDRGQPPNIITY 416
Query: 357 NAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLF 407
N+IL +E+ + R++ + + T+T++ +GL + G EE+ ++F
Sbjct: 417 NSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIF 471
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 186/422 (44%), Gaps = 61/422 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI----FSRTTLLS 79
A ++ IL G +I N LI C ++++ A H DK S TL++
Sbjct: 111 AFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLIN 170
Query: 80 AYSAAGNVKLAEKLFNATPVTLR---DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
G + A +L L D + Y+ ++ + + A L+ M R +
Sbjct: 171 GLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRIS 230
Query: 137 PDPFSFSTVLGAMSLIAE--------EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
PD F++++++ ++ + E + ++ DV + NTL+
Sbjct: 231 PDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTF---------NTLVDALF-- 279
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARKLLDGMTH 245
+ E+ L+A K + EP +++ ++ GY +++ A+ + + M
Sbjct: 280 KEGKVKEAKCLIAVMMK--------EGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQ 331
Query: 246 ----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
P ++ MI+G + + +EA F +MHS + +D TY+SLI+ GL
Sbjct: 332 RGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLIN-----GLCKS 386
Query: 302 GRQLHAYVLRTVV----QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DL 353
GR + A+ L + QP + + N+L+ K + +A + KM + D+
Sbjct: 387 GRLISAWKLFDEMLDRGQPPD---VITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADI 443
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQ 409
++N ++ G RL++A+ IFR++ + +++T+ VMI+GL + +E+L L ++
Sbjct: 444 FTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSK 503
Query: 410 MK 411
M+
Sbjct: 504 ME 505
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 173/422 (40%), Gaps = 76/422 (18%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KT 66
L ++ A L R I +L FR ++ + +ID CK ++ A L+ K
Sbjct: 172 LCKVGQTQAALQLLRRIERQLL---FRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKR 228
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR----DTISYNAMVKAYSHNLDGHA 122
+PD+F+ T+L+ + G +K L N + L+ D ++N +V A
Sbjct: 229 ISPDVFTYTSLIHGFCIVGQLKEVFVLLNE--MVLKNINPDVYTFNTLVDALFKEGKVKE 286
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A L M ++G P+ ++S ++ L+ E + + +++ G+ P + + +
Sbjct: 287 AKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVN-KAKDIFNSMMQRGM--TPDIQSYTI 343
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQK--DEPSWTTMIAGYVRNDDLASARKLL 240
C L E A LF+E + D +++++I G ++ L SA KL
Sbjct: 344 MINGLCKMKMLDE-------AVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLF 396
Query: 241 DGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
D M P + +N+++ + ++A KM GIQ D +TY
Sbjct: 397 DEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTY---------- 446
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----D 352
N LI K G+L A+++F + ++ D
Sbjct: 447 -----------------------------NILIDGLCKDGRLDDAQKIFRDLLIKSYNVD 477
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFN 408
+V++N +++G L+EA + ++ + + +T+ ++I L G +++ KL
Sbjct: 478 VVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIIIRALFGKGVNDKAEKLLR 537
Query: 409 QM 410
+M
Sbjct: 538 EM 539
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 144/320 (45%), Gaps = 27/320 (8%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL--IAEEEWHCQQL 162
++ + ++ YSH A LF ++ + G PD F+T++ + L +E H
Sbjct: 93 VTLSILINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALH---F 149
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H +V G TL++ +C T +L R+L L + D ++
Sbjct: 150 HDKLVAQGFQLSKVSYGTLING-LCKVGQTQAALQLLRRIERQL-----LFRPDVVMYSI 203
Query: 223 MIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
+I ++ + A L M P + ++I G+ G +E F +M
Sbjct: 204 IIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKN 263
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
I D YT+ +L+ A F G + L A +++ V+P+ + + L+ Y ++
Sbjct: 264 INPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPN----IVTYSVLMDGYCLVNEV 319
Query: 339 VQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVM 390
+A+++F+ M R D+ S+ +++G + L+EA +F E+ N+ +T++ +
Sbjct: 320 NKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSL 379
Query: 391 ISGLAESGFGEESLKLFNQM 410
I+GL +SG + KLF++M
Sbjct: 380 INGLCKSGRLISAWKLFDEM 399
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 132/318 (41%), Gaps = 44/318 (13%)
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FD + +F +LLS YS G + A +F+ PV RDT+S+N M+ + N D
Sbjct: 69 FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPV--RDTVSWNTMISGFLRNGDFDT 126
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
+ K F +M F +T+ +S CD ++ G
Sbjct: 127 SFKFFKQMTESNRVCCRFDKATLTTMLS------------GCDGLRLG------------ 162
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
I + + ++ V + +++ +I Y + + + RK+ D
Sbjct: 163 ---ISTSVTQMIHGLVFVGGF----------EREITVGNALITSYFKCECFSQGRKVFDE 209
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNC 301
M V W A+ISG ++ YE++ F +M G + + TY S + A +
Sbjct: 210 MIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRD 269
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+++H + + +Q L + +AL+ Y+KCG L A ++F+ D VS IL
Sbjct: 270 GQKIHGLLWKLGMQSD----LCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILV 325
Query: 362 GYINARRLEEAKFIFREV 379
+ EEA IF ++
Sbjct: 326 AFAQNGFEEEAIQIFTKM 343
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 41/198 (20%)
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM---HS 276
W ++++ Y + + +A + D M V+WN MISG++R+G ++ +F F++M +
Sbjct: 80 WNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNR 139
Query: 277 MGIQMDEYTYTSLISA--SFNTGLFNCGRQL-HAYVLRTVVQPSEHFILSVNNALITFYT 333
+ + D+ T T+++S G+ Q+ H V + ++V NALIT Y
Sbjct: 140 VCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFERE----ITVGNALITSYF 195
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 393
KC Q R+VFD+M R++V+W A+ ISG
Sbjct: 196 KCECFSQGRKVFDEMIERNVVTWTAV-------------------------------ISG 224
Query: 394 LAESGFGEESLKLFNQMK 411
LA++ F E+SL+LF QM+
Sbjct: 225 LAQNEFYEDSLRLFAQMR 242
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 175/445 (39%), Gaps = 72/445 (16%)
Query: 22 TLARAIHAHILTT--------GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
TL +IHA I+ R I N L+ +Y K A ++FD P D S
Sbjct: 51 TLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVS 110
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLR-----DTISYNAMVK-----------AYSHN 117
T++S + G+ + K F + R D + M+ + +
Sbjct: 111 WNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQM 170
Query: 118 LDGHAAVKLFVRMKRDG-------FAPDPFS-------------FSTVLGAMSLIAEEEW 157
+ G V F R G F + FS T +S +A+ E+
Sbjct: 171 IHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEF 230
Query: 158 HCQQLH-------CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA 210
+ L C V P+VL L S C L + + KL ++
Sbjct: 231 YEDSLRLFAQMRCCGSVS------PNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQS 284
Query: 211 PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
L + + ++ Y + L +A ++ + V+ ++ + ++G EEA
Sbjct: 285 DLCIE-----SALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 339
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLF-NCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
F KM ++G+++D ++++ F G + G+Q+H+ +++ + V N L+
Sbjct: 340 FTKMVALGMEVDANMVSAVLGV-FGVGTYLALGKQIHSLIIKKNFCENPF----VGNGLV 394
Query: 330 TFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----L 385
Y+KCG L + VF +M ++ VSWN++++ + +A + E+ + +
Sbjct: 395 NMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDV 454
Query: 386 TWTVMISGLAESGFGEESLKLFNQM 410
T+ ++ + +G E+ ++L M
Sbjct: 455 TFLSLLHACSHAGLVEKGMELLESM 479
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQP-------SEHFILSVNNALITFYTKCGKLV 339
TSL++ G +HA R + QP S+ L + N+L++ Y+KCG+
Sbjct: 38 TSLLTLCGRDRNLTLGSSIHA---RIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFR 94
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL-------TWTVMIS 392
A VFD MPVRD VSWN ++SG++ + + F+++ E N + T T M+S
Sbjct: 95 NAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLS 154
Query: 393 G 393
G
Sbjct: 155 G 155
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 118/295 (40%), Gaps = 53/295 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ + L+ YS G++ A ++F + D +S ++ A++ N A+++F +
Sbjct: 285 DLCIESALMDLYSKCGSLDAAWQIFESAEEL--DGVSLTVILVAFAQNGFEEEAIQIFTK 342
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G D S VLG + +Q+H ++K P V N L++ Y C
Sbjct: 343 MVALGMEVDANMVSAVLGVFG-VGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCG 401
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
DL+ + + MT +V
Sbjct: 402 ------------------------------------------DLSDSLLVFYQMTQKNSV 419
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAY 308
+WN++I+ + RHG +A + +M G+ + T+ SL+ A + GL G + L +
Sbjct: 420 SWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESM 479
Query: 309 VLRTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ P SEH+ ++ + G L +A++ + +P ++ W A+L
Sbjct: 480 TNDHGISPRSEHYA-----CVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLG 529