Miyakogusa Predicted Gene

Lj6g3v0057860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0057860.1 tr|A9SEI3|A9SEI3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_164550,28.1,2e-18,DUF716,Protein of unknown function
DUF716, TMEM45; seg,NULL,NODE_94684_length_1160_cov_11.820689.path1.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g045060.1 | transmembrane protein, putative | HC | chr1:16...   291   4e-79
Medtr7g084610.1 | transmembrane protein, putative | HC | chr7:32...    59   7e-09

>Medtr1g045060.1 | transmembrane protein, putative | HC |
           chr1:16976466-16977798 | 20130731
          Length = 291

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 165/290 (56%), Positives = 202/290 (69%), Gaps = 2/290 (0%)

Query: 1   MASVATHFSGFLLFFPVGVRRXXXXXXXXXQNPTHFRSKLWYFADPRWKNLDLYILLIAL 60
           MAS+AT+F GF+ FFP+G+ R          NP+HFRSKLWY +DP WKNLDLY+LLIAL
Sbjct: 1   MASLATNFCGFIFFFPIGLHRLLSSSSLYLHNPSHFRSKLWYLSDPNWKNLDLYLLLIAL 60

Query: 61  PIAXXXXXXXXXXXXGHPTYRFSFFQQSLSVLAFWALIILIIVYEYVGSSFMNESXXXXX 120
           PIA             HPT+RFSFFQQS ++LAFW LIILII  EYV S  +++S     
Sbjct: 61  PIASFSEFFIFLSFSNHPTFRFSFFQQSFTLLAFWVLIILIIGLEYVNSLHVSDSFVYVF 120

Query: 121 XXXXXXXEYSVMGKGSSGLSGIVYXXXXXXTLACAASCFYLSVKPGAFFAEFLLSSGLVF 180
                  EY VM KG SG++ +VY      TL CA++CFYLSVKP AFFAEF L  G+VF
Sbjct: 121 GGVVFLMEYDVMDKGVSGVADVVYGLLGGLTLVCASACFYLSVKPNAFFAEFFLCCGMVF 180

Query: 181 KGTWLLQTGLSLYTDAFGLKGCQKISL--LPPQQETVDMHCDLDEDSFRGVAMMQFLFTV 238
           KGTW LQ G SLYTD FGLKGC+KIS+  L P+ E VD+ CDLDEDS RG+AMM+ LF +
Sbjct: 181 KGTWFLQIGFSLYTDLFGLKGCKKISVLSLSPRIENVDVLCDLDEDSLRGIAMMELLFIL 240

Query: 239 HAFVVLVLAIGMFGVLASNRNLRCGESKGPLLAELESGSLRMRPLPELEM 288
           HA VVL+L +G FG+++   NLR G+ KGPLLA+LES S+R+    E+EM
Sbjct: 241 HAIVVLILGLGFFGLVSWGGNLRGGDVKGPLLADLESTSMRLCDASEIEM 290


>Medtr7g084610.1 | transmembrane protein, putative | HC |
           chr7:32644217-32645685 | 20130731
          Length = 301

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 158 CFYLSVKPGAFFAEFLLSSGLVFKGTWLLQTGLSLYTDAFGLKGCQKISLLPPQQETVDM 217
           C  L++ P  F A+  L++ L  +G W LQTGL+LY D F  +GC ++  +    E    
Sbjct: 166 CLLLTLFPRLFPADVGLAASLCLRGFWALQTGLTLYADPFIPEGCHRLLDVVNGVEG-ST 224

Query: 218 HCDLDEDSFRGVAMMQFLFTVH 239
            CDLDE  FR +A++   F V+
Sbjct: 225 KCDLDESKFRALAILDLAFVVY 246