Miyakogusa Predicted Gene

Lj6g3v0028890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0028890.1 tr|I3SCX2|I3SCX2_LOTJA Malate dehydrogenase
OS=Lotus japonicus PE=2 SV=1,100,0,Ldh_1_C,Lactate/malate
dehydrogenase, C-terminal; Ldh_1_N,Lactate/malate dehydrogenase,
N-terminal; ,CUFF.58115.1
         (332 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g043040.1 | cytoplasmic-like malate dehydrogenase | HC | c...   601   e-172
Medtr1g076130.1 | cytoplasmic-like malate dehydrogenase | HC | c...   590   e-169
Medtr8g005980.1 | cytoplasmic-like malate dehydrogenase | HC | c...   535   e-152
Medtr1g090730.1 | NADP-dependent malate dehydrogenase | HC | chr...   217   1e-56
Medtr1g090730.2 | NADP-dependent malate dehydrogenase | HC | chr...   199   4e-51
Medtr7g037650.1 | enoyl-acyl-carrier reductase | LC | chr7:13884...    72   6e-13
Medtr4g092690.1 | glyoxysomal malate dehydrogenase | HC | chr4:3...    57   2e-08
Medtr5g014710.1 | glyoxysomal malate dehydrogenase | HC | chr5:4...    55   8e-08

>Medtr1g043040.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr1:16122538-16117304 | 20130731
          Length = 332

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 294/332 (88%), Positives = 300/332 (90%)

Query: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
           MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDI PAAESLNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120
           AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 121 AAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVK 180
           AAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERL+V VSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 181 NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSSTQYPDVNHATV TPAGEKPVRELVSDD WLNGEFI+TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVNTPAGEKPVRELVSDDAWLNGEFISTVQQRGAAIIKARK 240

Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIV 300
                      CDHIRDWVLGTP+GT+VSMGVYSDGSYNVP+GLIYSFPVTCANGEWKIV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIV 300

Query: 301 QGLSIDEFSRXXXXXXXXXXXXXXXXXYSCLS 332
           QGLSIDEFSR                 YSCLS
Sbjct: 301 QGLSIDEFSRKKLDLTAEELSEEKNLAYSCLS 332


>Medtr1g076130.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr1:33721743-33725370 | 20130731
          Length = 332

 Score =  590 bits (1520), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/332 (86%), Positives = 295/332 (88%)

Query: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
           MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD
Sbjct: 1   MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 61  AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120
           AAFPLLKGVVATTDVVE CTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH
Sbjct: 61  AAFPLLKGVVATTDVVEGCTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 121 AAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVK 180
           AAANCKVLVVANPANTNALILKEFAPSIPE+NISCLTRLDHNRALGQISERL+V VS+VK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVEVSNVK 180

Query: 181 NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITTVQQRGAAIIKARK 240
           NVIIWGNHSS+QYPDVNHATVK  + EKPVRELV+DD WLNGEFI TVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSSQYPDVNHATVKISSAEKPVRELVADDAWLNGEFIATVQQRGAAIIKARK 240

Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIV 300
                      CDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVT  NGEW+IV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTTRNGEWQIV 300

Query: 301 QGLSIDEFSRXXXXXXXXXXXXXXXXXYSCLS 332
           QGLSIDEFSR                 YSCLS
Sbjct: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332


>Medtr8g005980.1 | cytoplasmic-like malate dehydrogenase | HC |
           chr8:430275-432634 | 20130731
          Length = 413

 Score =  535 bits (1378), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 259/329 (78%), Positives = 277/329 (84%)

Query: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
           K+PV VLVTGAAGQIGYALVPMIARG+MLGP+QPVILHMLDI PA E+L GVKMEL+DAA
Sbjct: 85  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVILHMLDIEPALEALKGVKMELIDAA 144

Query: 63  FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAA 122
           FPLL+GVVATTDVVEAC  VNIAVMVGGFPRKEGMERKDVM+KNVSIYK+QASALE+HAA
Sbjct: 145 FPLLRGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKTQASALEEHAA 204

Query: 123 ANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVKNV 182
           A CKVLV+ANPANTNALILKEFAPSIPE+NI+CLTRLDHNRALGQISE+L+V VSDVKNV
Sbjct: 205 AYCKVLVIANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVDVSDVKNV 264

Query: 183 IIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITTVQQRGAAIIKARKXX 242
           IIWGNHSSTQYPDVNHATV T  G+K VRELV+DD WLN EFITTVQQRG AIIKARK  
Sbjct: 265 IIWGNHSSTQYPDVNHATVATSNGKKHVRELVADDNWLNSEFITTVQQRGGAIIKARKLS 324

Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWKIVQG 302
                    CDHI DWVLGTP+GTWVSMGVYSDGSY +  GLIYSFPVTC  GEW IVQG
Sbjct: 325 SALSAASAACDHIHDWVLGTPKGTWVSMGVYSDGSYGIQPGLIYSFPVTCDKGEWNIVQG 384

Query: 303 LSIDEFSRXXXXXXXXXXXXXXXXXYSCL 331
           L IDEFSR                  SCL
Sbjct: 385 LKIDEFSREKMDKTAQELIEEKALANSCL 413


>Medtr1g090730.1 | NADP-dependent malate dehydrogenase | HC |
           chr1:40748776-40743707 | 20130731
          Length = 437

 Score =  217 bits (553), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 176/310 (56%), Gaps = 6/310 (1%)

Query: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
           K  + + V+GAAG I   L+  +A G + GP+QPV L +L    + ++L GV MEL D+ 
Sbjct: 92  KKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPVALKLLGSERSLQALEGVAMELEDSL 151

Query: 63  FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAA 122
           FPLL+ V+ + D  E     + A+++G  PR  G+ER  ++  N  I+  Q  AL   A+
Sbjct: 152 FPLLREVIISIDPYEVFQDADWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVAS 211

Query: 123 ANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVKNV 182
            N KV+VV NP NTNALI  + AP+IP +N   LTRLD NRA  Q++ +  V    V N+
Sbjct: 212 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 271

Query: 183 IIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITTVQQRGAAIIKARKXX 242
            IWGNHS+TQ PD  +A +       PV+E++ D  WL  EF   VQ+RG  +I+     
Sbjct: 272 TIWGNHSTTQVPDFLNARIDG----LPVKEVIKDHKWLEEEFTEKVQKRGGVLIQKWGRS 327

Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPV-TCANGEWKIV 300
                     D IR  +  TPEG W S GVY+ G+ Y +   +++S P  +  +G++++V
Sbjct: 328 SAASTSVSIVDAIRSLITPTPEGDWFSTGVYTSGNPYGIAEDIVFSMPCRSKGDGDYELV 387

Query: 301 QGLSIDEFSR 310
           + +  D++ R
Sbjct: 388 KDVIFDDYLR 397


>Medtr1g090730.2 | NADP-dependent malate dehydrogenase | HC |
           chr1:40748575-40744691 | 20130731
          Length = 408

 Score =  199 bits (505), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 151/270 (55%), Gaps = 4/270 (1%)

Query: 3   KDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
           K  + + V+GAAG I   L+  +A G + GP+QPV L +L    + ++L GV MEL D+ 
Sbjct: 92  KKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPVALKLLGSERSLQALEGVAMELEDSL 151

Query: 63  FPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAA 122
           FPLL+ V+ + D  E     + A+++G  PR  G+ER  ++  N  I+  Q  AL   A+
Sbjct: 152 FPLLREVIISIDPYEVFQDADWALLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVAS 211

Query: 123 ANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVKNV 182
            N KV+VV NP NTNALI  + AP+IP +N   LTRLD NRA  Q++ +  V    V N+
Sbjct: 212 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 271

Query: 183 IIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITTVQQRGAAIIKARKXX 242
            IWGNHS+TQ PD  +A +       PV+E++ D  WL  EF   VQ+RG  +I+     
Sbjct: 272 TIWGNHSTTQVPDFLNARIDG----LPVKEVIKDHKWLEEEFTEKVQKRGGVLIQKWGRS 327

Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGV 272
                     D IR  +  TPEG W S GV
Sbjct: 328 SAASTSVSIVDAIRSLITPTPEGDWFSTGV 357


>Medtr7g037650.1 | enoyl-acyl-carrier reductase | LC |
          chr7:13884962-13883315 | 20130731
          Length = 532

 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 38/46 (82%)

Query: 15 GQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
          GQIG AL PMIARG+MLG +Q VILHMLDI P  E+L GVKMEL+D
Sbjct: 24 GQIGDALAPMIARGMMLGTNQHVILHMLDIEPTLEALKGVKMELID 69


>Medtr4g092690.1 | glyoxysomal malate dehydrogenase | HC |
           chr4:36762718-36765660 | 20130731
          Length = 356

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 31/240 (12%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMEL--VDAAFP 64
           +V V GAAG IG +L  ++    ++      +LH+ D+     +  GV  ++  +D    
Sbjct: 46  KVAVLGAAGGIGQSLSLLLKMNPLVS-----VLHLYDV----VNTPGVTADVSHMDTG-A 95

Query: 65  LLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAAAN 124
           +++G +    +  A TG+++ V+  G PRK GM R D+   N  I ++    + K    N
Sbjct: 96  VVRGFLGQPQLENALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVRTLCEGIAK-CCPN 154

Query: 125 CKVLVVANPANTN----ALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVSDVK 180
             V +++NP N+     A + K+     P+R +  +T LD  RA   ++E L V   DV 
Sbjct: 155 AIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLG-VTALDVVRANTFVAEVLGVDPRDVD 213

Query: 181 NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFITT-VQQRGAAIIKAR 239
             ++ G+   T  P ++          KP     +++T    E++T  +Q  G  +++A+
Sbjct: 214 VPVVGGHAGVTILPLLSQV--------KPPSSFTAEET----EYLTNRIQNGGTEVVEAK 261


>Medtr5g014710.1 | glyoxysomal malate dehydrogenase | HC |
           chr5:4992016-4987668 | 20130731
          Length = 358

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 37/243 (15%)

Query: 7   RVLVTGAAGQIGYALVPMIARGVMLGPDQPVI--LHMLDI---PPAAESLNGVKMELVDA 61
           +V + GAAG IG  L        ML    P++  LH+ D+   P     ++ +    V  
Sbjct: 48  KVAILGAAGGIGQPLS-------MLMKINPLVSVLHLYDVVNTPGVTSDISHMDTSAV-- 98

Query: 62  AFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHA 121
               ++G +    + +A TG+++ ++  G PRK GM R D+   N  I K+   A+ K  
Sbjct: 99  ----VRGFLGQNQLEDALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKQ- 153

Query: 122 AANCKVLVVANPANTN----ALILKEFAPSIPERNISCLTRLDHNRALGQISERLSVPVS 177
                V +++NP N+     A + K      P+R +  +T LD  RA   ++E + +   
Sbjct: 154 CPKAIVNLISNPVNSTVPIAAEVFKRAGTYDPKRLLG-VTMLDVVRANTFVAEVMGLDPR 212

Query: 178 DVKNVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVSDDTWLNGEFIT-TVQQRGAAII 236
           DV   ++ G+   T  P ++   VK P+   P +E+         E++T  +Q  G  ++
Sbjct: 213 DVDVPVVGGHAGITILPLLSQ--VKPPSSFTP-KEI---------EYLTDRIQNGGTEVV 260

Query: 237 KAR 239
           +A+
Sbjct: 261 EAK 263