Miyakogusa Predicted Gene

Lj6g3v0028850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0028850.1 tr|Q8GYU9|Q8GYU9_ARATH At4g14380 OS=Arabidopsis
thaliana GN=At4g14380/dl3230w PE=2 SV=1,31.37,3e-19,DUF761,Protein of
unknown function DUF761, plant; seg,NULL,CUFF.57398.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g042820.1 | DUF761 domain protein | HC | chr1:16020653-160...   144   6e-35
Medtr1g076110.1 | DUF761 domain protein | LC | chr1:33715414-337...   116   1e-26

>Medtr1g042820.1 | DUF761 domain protein | HC |
           chr1:16020653-16022450 | 20130731
          Length = 186

 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 13/186 (6%)

Query: 1   MSRXXXXXXXXXXXXXXXCFSNKLQSKIHKVNLSKAIKTTLQNLLSAFKSLIHLINSSL- 59
           MSR                 SN  QSK+HK+N+SK  KTTLQ++LS F SL HLI S   
Sbjct: 1   MSRMKLSKKLKPAKKAWKNLSNNFQSKLHKLNISKTFKTTLQHILSLFHSLTHLITSKTK 60

Query: 60  -HRTLAATRT--YSTYHHYHVQSKNISAIHIDDLFAEKGTXXXXXXX-----SQGETSRE 111
            HR+L + ++   ++  +YH Q K+ +AI+I+DL+++  +            +QGETSR+
Sbjct: 61  THRSLTSFKSSYAASPSYYHFQHKSFAAININDLYSQTHSVSSMNSSSNIHHAQGETSRD 120

Query: 112 VNH----GESSGLNSIEDAWKAVVARSPHLQVDQRAEEFISKFHEDMRLQKERSMIEFQE 167
           +        ++ + +IEDAWK VV+RSP LQVDQ+AEEFI KF ED+RLQKE+S++EF E
Sbjct: 121 IEKVHVDDNNNDVETIEDAWKVVVSRSPMLQVDQKAEEFIYKFREDIRLQKEKSLLEFHE 180

Query: 168 MLARSA 173
            LARS 
Sbjct: 181 RLARST 186


>Medtr1g076110.1 | DUF761 domain protein | LC |
           chr1:33715414-33715842 | 20130731
          Length = 142

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 93/146 (63%), Gaps = 10/146 (6%)

Query: 31  VNLSKAIKTTLQNLLSAFKSLIHLINSSLHRTLAATRTYSTYHHYHVQSKNISAIHIDDL 90
           + L K +    + L++ FK ++    ++ H  + + R+ ++Y   +  SKN SAI IDDL
Sbjct: 4   MRLGKKLHPAKKRLIATFKRIL----ATFHSPIPSRRSKTSY--VYATSKNKSAIRIDDL 57

Query: 91  FAEKGTXXXXXXXSQGETSRE---VNHGESSGLNSIEDAWKAVVARSPHLQVDQRAEEFI 147
           F+E             ETSR    V   +S  +++IEDAWK VV ++P LQVD++AEEFI
Sbjct: 58  FSE-CVHAADKANGLEETSRGKELVGMMDSGDIDTIEDAWKIVVGKTPQLQVDEKAEEFI 116

Query: 148 SKFHEDMRLQKERSMIEFQEMLARSA 173
            KF+ED+RLQKERS++E+QEMLARSA
Sbjct: 117 KKFYEDVRLQKERSLMEYQEMLARSA 142