Miyakogusa Predicted Gene

Lj6g3v0028740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0028740.2 Non Characterized Hit- tr|I1N3T6|I1N3T6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,73.77,0,SUBFAMILY NOT NAMED,NULL; NOP14,Nop14-like protein;
Nop14,Nop14-like protein; coiled-coil,NULL; seg,,CUFF.57394.2
         (561 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g442830.1 | Nop14 nucleolar-like protein | HC | chr1:15941...   657   0.0  
Medtr1g064300.1 | Nop14 nucleolar-like protein | HC | chr1:28286...   651   0.0  
Medtr1g064300.2 | Nop14 nucleolar-like protein | HC | chr1:28286...   647   0.0  
Medtr1g442820.1 | Nop14 nucleolar-like protein | HC | chr1:15935...   456   e-128
Medtr1g064300.3 | Nop14 nucleolar-like protein | HC | chr1:28286...   350   2e-96

>Medtr1g442830.1 | Nop14 nucleolar-like protein | HC |
           chr1:15941855-15950679 | 20130731
          Length = 946

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/593 (59%), Positives = 403/593 (67%), Gaps = 54/593 (9%)

Query: 1   MGFEMRARPSDRMKTPEEVAQXXXXXXXXXXXXXXXXMIAAXXXXXXXXXXXXXXXXXXX 60
           MGFEMRARPSDR+KT EE+ Q                M AA                   
Sbjct: 298 MGFEMRARPSDRLKTKEEIDQEEREHLEELEKKRQKRMTAAEDSSEEDNEESEKPSK--- 354

Query: 61  XXXXXXXXXXXQKQRFPSGDDLGDSFSVNDETLTKKGCIEKILESINXXXXXXXXXXXXX 120
                      +K R  SGDDLGDSFSV++ET+TKKG +++ILE                
Sbjct: 355 -----------EKPRSLSGDDLGDSFSVDEETMTKKGWVDEILE--------RRDEEEGS 395

Query: 121 XXXXXXXXXXXXXXXFGKHKNDLTLKDWEQNDDDDIXXXXX-------XXXXXXXXXXXX 173
                            ++  + TLKDWEQ+DDDDI                        
Sbjct: 396 SSEDDDDSDEESEDDLDENDKNTTLKDWEQSDDDDISAGSEDEDDISVGSEDEDEDEERA 455

Query: 174 XXXLDELK------------------------ILDTNR-KVGGKKSKDFDIPYIIQAPQT 208
              +D++K                         LDT +  VGGK SK+ +IPYII+AP+T
Sbjct: 456 AEEVDKVKGLNVGIHKKAKRNDSVESVKGNNGSLDTKKIVVGGKMSKELEIPYIIEAPKT 515

Query: 209 FGELCSLVDKCSNSNTILVINRIRKSNSIKLAVENRKKMQTFYGVLLEYFAVLANKKPLN 268
           F ELCSLVDK SNS+TIL+INRIRKSN I LA ENRKK+Q FYGVLL+YFAVLANKKPLN
Sbjct: 516 FEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKKPLN 575

Query: 269 VELLNMLVKPLIEMSLETPYFAAVCARTRIQKIREQFVGXXXXXXXXXXXXXKTLCLLRL 328
           VEL+NMLVKPLIEMS E PYFAA+CAR RI+  R+QFV              KT+CLLRL
Sbjct: 576 VELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKTMCLLRL 635

Query: 329 WSMTFSCSDFRHPVLTPVILLMCEFLMRCPIASGRDIAIGCFLCSMLLSVFRQSRKFCPE 388
           WSM F CSDFRHPV+TPVILLMCE+LMRCPI SGRDIA+G FLCSMLLSVF+QSRKFCPE
Sbjct: 636 WSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAVGSFLCSMLLSVFKQSRKFCPE 695

Query: 389 PIMFLRTLLYAATESKYISDEDALFNHLMEPKALKPLLCIHETVNEISPLDFFKIINMPE 448
           PI+F++TLL A TESK+IS E++   HLME K LKPLL I+E V++IS L+FFK+INMPE
Sbjct: 696 PIVFIQTLLLATTESKHISCENSQLYHLMELKDLKPLLRINEEVDKISTLNFFKLINMPE 755

Query: 449 DSCFFTSDSFRASVLLSAVETLQGYINIYEGLSSFPEMFLPILRLLLEIAEQKNIPNALQ 508
           DS FFT+DSFRASVL++AVETLQGYIN Y+ LSSFPE+FLPILRLLLEIAEQKN+PNAL+
Sbjct: 756 DSPFFTTDSFRASVLVTAVETLQGYINAYDNLSSFPEIFLPILRLLLEIAEQKNMPNALR 815

Query: 509 DKIKDVAELIKLKVDEHHSLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDP 561
           DKIKDVAELIKLKVDEHH+LRRPLQMRKQK VPIKLLNPKFEENYVKGRDYDP
Sbjct: 816 DKIKDVAELIKLKVDEHHTLRRPLQMRKQKQVPIKLLNPKFEENYVKGRDYDP 868


>Medtr1g064300.1 | Nop14 nucleolar-like protein | HC |
           chr1:28286674-28295738 | 20130731
          Length = 964

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/599 (58%), Positives = 405/599 (67%), Gaps = 52/599 (8%)

Query: 1   MGFEMRARPSDRMKTPEEVAQXXXXXXXXXXXXXXXXMIAAXXXXXXXXXXXXXXXXXXX 60
           MGFEMRARPSDR+KT EE+AQ                M AA                   
Sbjct: 302 MGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMAAAEDSSEEDDEESEKPSK--- 358

Query: 61  XXXXXXXXXXXQKQRFPSGDDLGDSFSVNDETLTKKGCIEKILESINXXXXXXXXXXXXX 120
                      +K R  SGDDLGDSFSV++ET+TKKG +++ILE  +             
Sbjct: 359 -----------EKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGE 407

Query: 121 XXXXXXXXXXXXXXXFG---KHKNDLTLKDWEQNDDDDIXXXXXXXXXXXXXXXXXXXX- 176
                           G   ++  + TLKDWEQ+DDDDI                     
Sbjct: 408 DSDDSERSEDSGEGSEGDLDENDKNTTLKDWEQSDDDDISAGSEGEDDDISAGSEDEDDD 467

Query: 177 ---------LDELKIL------------------------DTNRKV-GGKKSKDFDIPYI 202
                    +D++K L                        DT + V GGK SK+ +IPYI
Sbjct: 468 EDEESAAEEVDKVKGLNVGIHKKAKRNDSVESVKGDNGSSDTKKIVIGGKMSKELEIPYI 527

Query: 203 IQAPQTFGELCSLVDKCSNSNTILVINRIRKSNSIKLAVENRKKMQTFYGVLLEYFAVLA 262
           I+AP+TF ELCSLVDK SNS+TIL+INRIRKSN I LA ENRKK+Q FYGVLL+YFAVLA
Sbjct: 528 IEAPKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLA 587

Query: 263 NKKPLNVELLNMLVKPLIEMSLETPYFAAVCARTRIQKIREQFVGXXXXXXXXXXXXXKT 322
           NKK LNVEL+NMLVKPLIEMS E PYFAA+CAR RI+  R+QFV              KT
Sbjct: 588 NKKMLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKT 647

Query: 323 LCLLRLWSMTFSCSDFRHPVLTPVILLMCEFLMRCPIASGRDIAIGCFLCSMLLSVFRQS 382
           LCLLRLWSM F CSDFRHPV+TPVILLMCE+LMRCPI SGRDIAIG FLCSMLLSVF+QS
Sbjct: 648 LCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAIGSFLCSMLLSVFKQS 707

Query: 383 RKFCPEPIMFLRTLLYAATESKYISDEDALFNHLMEPKALKPLLCIHETVNEISPLDFFK 442
           RKFCPEPI+F++TLL A TESK+IS E++   HLME K LKPLL I+E V++IS L+FFK
Sbjct: 708 RKFCPEPIVFIQTLLLATTESKHISCENSQLYHLMELKDLKPLLRINEEVDKISTLNFFK 767

Query: 443 IINMPEDSCFFTSDSFRASVLLSAVETLQGYINIYEGLSSFPEMFLPILRLLLEIAEQKN 502
           +INMPEDS FFT+DSFRASVL+++VETLQGYIN Y+ LSSFPE+FLPILRLLLEIAEQKN
Sbjct: 768 LINMPEDSPFFTTDSFRASVLVTSVETLQGYINAYDNLSSFPEIFLPILRLLLEIAEQKN 827

Query: 503 IPNALQDKIKDVAELIKLKVDEHHSLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDP 561
           +PNAL+DKIKDVAELIKLKVDEHH+LRRPLQMRKQK VPIKLLNPKFEENYVKGRDYDP
Sbjct: 828 MPNALRDKIKDVAELIKLKVDEHHTLRRPLQMRKQKLVPIKLLNPKFEENYVKGRDYDP 886


>Medtr1g064300.2 | Nop14 nucleolar-like protein | HC |
           chr1:28286719-28295738 | 20130731
          Length = 758

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/599 (58%), Positives = 405/599 (67%), Gaps = 52/599 (8%)

Query: 1   MGFEMRARPSDRMKTPEEVAQXXXXXXXXXXXXXXXXMIAAXXXXXXXXXXXXXXXXXXX 60
           MGFEMRARPSDR+KT EE+AQ                M AA                   
Sbjct: 96  MGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMAAAEDSSEEDDEESEKPSK--- 152

Query: 61  XXXXXXXXXXXQKQRFPSGDDLGDSFSVNDETLTKKGCIEKILESINXXXXXXXXXXXXX 120
                      +K R  SGDDLGDSFSV++ET+TKKG +++ILE  +             
Sbjct: 153 -----------EKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGE 201

Query: 121 XXXXXXXXXXXXXXXFG---KHKNDLTLKDWEQNDDDDIXXXXXXXXXXXXX-------- 169
                           G   ++  + TLKDWEQ+DDDDI                     
Sbjct: 202 DSDDSERSEDSGEGSEGDLDENDKNTTLKDWEQSDDDDISAGSEGEDDDISAGSEDEDDD 261

Query: 170 --XXXXXXXLDELKIL------------------------DTNRKV-GGKKSKDFDIPYI 202
                    +D++K L                        DT + V GGK SK+ +IPYI
Sbjct: 262 EDEESAAEEVDKVKGLNVGIHKKAKRNDSVESVKGDNGSSDTKKIVIGGKMSKELEIPYI 321

Query: 203 IQAPQTFGELCSLVDKCSNSNTILVINRIRKSNSIKLAVENRKKMQTFYGVLLEYFAVLA 262
           I+AP+TF ELCSLVDK SNS+TIL+INRIRKSN I LA ENRKK+Q FYGVLL+YFAVLA
Sbjct: 322 IEAPKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLA 381

Query: 263 NKKPLNVELLNMLVKPLIEMSLETPYFAAVCARTRIQKIREQFVGXXXXXXXXXXXXXKT 322
           NKK LNVEL+NMLVKPLIEMS E PYFAA+CAR RI+  R+QFV              KT
Sbjct: 382 NKKMLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKT 441

Query: 323 LCLLRLWSMTFSCSDFRHPVLTPVILLMCEFLMRCPIASGRDIAIGCFLCSMLLSVFRQS 382
           LCLLRLWSM F CSDFRHPV+TPVILLMCE+LMRCPI SGRDIAIG FLCSMLLSVF+QS
Sbjct: 442 LCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAIGSFLCSMLLSVFKQS 501

Query: 383 RKFCPEPIMFLRTLLYAATESKYISDEDALFNHLMEPKALKPLLCIHETVNEISPLDFFK 442
           RKFCPEPI+F++TLL A TESK+IS E++   HLME K LKPLL I+E V++IS L+FFK
Sbjct: 502 RKFCPEPIVFIQTLLLATTESKHISCENSQLYHLMELKDLKPLLRINEEVDKISTLNFFK 561

Query: 443 IINMPEDSCFFTSDSFRASVLLSAVETLQGYINIYEGLSSFPEMFLPILRLLLEIAEQKN 502
           +INMPEDS FFT+DSFRASVL+++VETLQGYIN Y+ LSSFPE+FLPILRLLLEIAEQKN
Sbjct: 562 LINMPEDSPFFTTDSFRASVLVTSVETLQGYINAYDNLSSFPEIFLPILRLLLEIAEQKN 621

Query: 503 IPNALQDKIKDVAELIKLKVDEHHSLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDP 561
           +PNAL+DKIKDVAELIKLKVDEHH+LRRPLQMRKQK VPIKLLNPKFEENYVKGRDYDP
Sbjct: 622 MPNALRDKIKDVAELIKLKVDEHHTLRRPLQMRKQKLVPIKLLNPKFEENYVKGRDYDP 680


>Medtr1g442820.1 | Nop14 nucleolar-like protein | HC |
           chr1:15935755-15941484 | 20130731
          Length = 591

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/493 (51%), Positives = 303/493 (61%), Gaps = 49/493 (9%)

Query: 1   MGFEMRARPSDRMKTPEEVAQXXXXXXXXXXXXXXXXMIAAXXXXXXXXXXXXXXXXXXX 60
           MGFEMRARPSDR+KT EE+ Q                M AA                   
Sbjct: 96  MGFEMRARPSDRLKTKEEIDQEEREHLEELEKKRQKRMTAAEDSSEEDNEESEKPSK--- 152

Query: 61  XXXXXXXXXXXQKQRFPSGDDLGDSFSVNDETLTKKGCIEKILE---SINXXXXXXXXXX 117
                      +K R  SGDDLGDSFSV++ET+TKKG +++ILE                
Sbjct: 153 -----------EKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGE 201

Query: 118 XXXXXXXXXXXXXXXXXXFGKHKNDLTLKDWEQNDDDDIXXXXXX-------XXXXXXXX 170
                               ++  + TLKDWEQ+DDDDI                     
Sbjct: 202 DDDDLERSEDSDEESEDDLDENDKNTTLKDWEQSDDDDISAGSEDEDDISVGSEDEDEDE 261

Query: 171 XXXXXXLDELK------------------------ILDTNR-KVGGKKSKDFDIPYIIQA 205
                 +D++K                         LDT +  VGGK SK+ +IPYII+A
Sbjct: 262 ERAAEEVDKVKGLNVGIHKKAKRNDSVESVKGNNGSLDTKKIVVGGKMSKELEIPYIIEA 321

Query: 206 PQTFGELCSLVDKCSNSNTILVINRIRKSNSIKLAVENRKKMQTFYGVLLEYFAVLANKK 265
           P+TF ELCSLVDK SNS+TIL+INRIRKSN I LA ENRKK+Q FYGVLL+YFAVLANKK
Sbjct: 322 PKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKK 381

Query: 266 PLNVELLNMLVKPLIEMSLETPYFAAVCARTRIQKIREQFVGXXXXXXXXXXXXXKTLCL 325
           PLNVEL+NMLVKPLIEMS E PYFAA+CAR RI+  R+QFV              KT+CL
Sbjct: 382 PLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKTMCL 441

Query: 326 LRLWSMTFSCSDFRHPVLTPVILLMCEFLMRCPIASGRDIAIGCFLCSMLLSVFRQSRKF 385
           LRLWSM F CSDFRHPV+TPVILLMCE+LMRCPI SGRDIA+G FLCSMLLSVF++SRKF
Sbjct: 442 LRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAVGSFLCSMLLSVFKESRKF 501

Query: 386 CPEPIMFLRTLLYAATESKYISDEDALFNHLMEPKALKPLLCIHETVNEISPLDFFKIIN 445
           CPEPI+F++TLL A TESK+IS E++   HLME K LKPLL I+E V++IS L+FFK+I+
Sbjct: 502 CPEPIVFIQTLLLATTESKHISCENSQLYHLMELKDLKPLLRINEEVDKISALNFFKLID 561

Query: 446 MPEDSCFFTSDSF 458
           MPEDS FFT+DSF
Sbjct: 562 MPEDSPFFTTDSF 574


>Medtr1g064300.3 | Nop14 nucleolar-like protein | HC |
           chr1:28286719-28292138 | 20130731
          Length = 720

 Score =  350 bits (899), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 205/416 (49%), Positives = 237/416 (56%), Gaps = 52/416 (12%)

Query: 1   MGFEMRARPSDRMKTPEEVAQXXXXXXXXXXXXXXXXMIAAXXXXXXXXXXXXXXXXXXX 60
           MGFEMRARPSDR+KT EE+AQ                M AA                   
Sbjct: 302 MGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMAAAEDSSEEDDEESEKPSK--- 358

Query: 61  XXXXXXXXXXXQKQRFPSGDDLGDSFSVNDETLTKKGCIEKILESINXXXXXXXXXXXXX 120
                      +K R  SGDDLGDSFSV++ET+TKKG +++ILE  +             
Sbjct: 359 -----------EKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGE 407

Query: 121 XXXXXXXXXXXXXXXFG---KHKNDLTLKDWEQNDDDDIXXXXXXXXXXXXXXXXXXXX- 176
                           G   ++  + TLKDWEQ+DDDDI                     
Sbjct: 408 DSDDSERSEDSGEGSEGDLDENDKNTTLKDWEQSDDDDISAGSEGEDDDISAGSEDEDDD 467

Query: 177 ---------LDELKIL------------------------DTNRKV-GGKKSKDFDIPYI 202
                    +D++K L                        DT + V GGK SK+ +IPYI
Sbjct: 468 EDEESAAEEVDKVKGLNVGIHKKAKRNDSVESVKGDNGSSDTKKIVIGGKMSKELEIPYI 527

Query: 203 IQAPQTFGELCSLVDKCSNSNTILVINRIRKSNSIKLAVENRKKMQTFYGVLLEYFAVLA 262
           I+AP+TF ELCSLVDK SNS+TIL+INRIRKSN I LA ENRKK+Q FYGVLL+YFAVLA
Sbjct: 528 IEAPKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLA 587

Query: 263 NKKPLNVELLNMLVKPLIEMSLETPYFAAVCARTRIQKIREQFVGXXXXXXXXXXXXXKT 322
           NKK LNVEL+NMLVKPLIEMS E PYFAA+CAR RI+  R+QFV              KT
Sbjct: 588 NKKMLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKT 647

Query: 323 LCLLRLWSMTFSCSDFRHPVLTPVILLMCEFLMRCPIASGRDIAIGCFLCSMLLSV 378
           LCLLRLWSM F CSDFRHPV+TPVILLMCE+LMRCPI SGRDIAIG FLCSMLLSV
Sbjct: 648 LCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAIGSFLCSMLLSV 703